ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098E17, full insert sequence Length = 1954 Score = 323 bits (163), Expect = 3e-85 Identities = 310/359 (86%) Strand = Plus / Plus Query: 1 ctggttcaagctcaaccacactgatttgaaaggcattttggacagtggtaatgaccttcc 60 ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 529 ctggttcaagctcaatcacactgatttgcaaggcattctggacagtggtaatgaccttcc 588 Query: 61 cttccctgatggtctcctcatcaatggccaaggctggaatggcaacaggttcacagtaga 120 ||||||||| || || |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 589 accccctgatgggcttcttatcaatggccaaggctggaacggcaacaggtttacagtaga 648 Query: 121 ccaagggaaaacatatcgttttcgggtgtcgaacgtcggcatctcaacttcggtgaacat 180 |||||||||||| || |||||| |||| ||||| || ||||| |||| || |||||||| Sbjct: 649 ccaagggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacat 708 Query: 181 aaggatccagggccattccttgctcctggtggaggtggagggatcacacaccatgcagaa 240 |||||| || || ||||||||||| ||||| ||||||||||||||||||||| | |||| Sbjct: 709 aaggattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtacagag 768 Query: 241 cacctactcgtcgctcgacgtccacctaggccagtcctactcgttccttgtgacggccga 300 ||| ||| | ||| | || ||||| ||||||||||||||||| ||||| |||||||| || Sbjct: 769 cacatacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctga 828 Query: 301 ccagccaccgcagggctacaccattgtggtctcgacgcgcttcaccaaccccgtgctca 359 |||||||| |||| ||||| |||| | |||||||| || |||||||| || ||||||| Sbjct: 829 tcagccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctca 887
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 124 agggaaaacatatcgttttcgggtgtcgaacgtcggcatctcaacttcggtgaacataag 183 ||||||||| || |||||| |||| ||||| || ||||| |||| || ||||||||||| Sbjct: 27852792 agggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacataag 27852733 Query: 184 gatccagggccattccttgctcctggtggaggtggagggatcacacaccatgcagaacac 243 ||| || || ||||||||||| ||||| ||||||||||||||||||||| |||||| ||| Sbjct: 27852732 gattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtgcagagcac 27852673 Query: 244 ctactcgtcgctcgacgtccacctaggccagtcctactcgttccttgtgacggccgacca 303 ||| | ||| | || ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct: 27852672 atacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctgatca 27852613 Query: 304 gccaccgcagggctacaccattgtggtctcgacgcgcttcaccaaccccgtgctca 359 |||||| |||| ||||| |||| | |||||||| || |||||||| || ||||||| Sbjct: 27852612 gccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctca 27852557 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 23 gatttgaaaggcattttggacagtggtaatgaccttcccttccctgatggtctcctcatc 82 |||||| |||||||| |||||||||||||||||||||| ||||||||| || || ||| Sbjct: 27852989 gatttgcaaggcattctggacagtggtaatgaccttccaccccctgatgggcttcttatc 27852930 Query: 83 aatggccaaggctggaatggcaacaggttcacagtagaccaagg 126 ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 27852929 aatggccaaggctggaacggcaacaggtttacagtagaccaagg 27852886
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 124 agggaaaacatatcgttttcgggtgtcgaacgtcggcatctcaacttcggtgaacataag 183 ||||||||| || |||||| |||| ||||| || ||||| |||| || ||||||||||| Sbjct: 155301 agggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacataag 155242 Query: 184 gatccagggccattccttgctcctggtggaggtggagggatcacacaccatgcagaacac 243 ||| || || ||||||||||| ||||| ||||||||||||||||||||| |||||| ||| Sbjct: 155241 gattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtgcagagcac 155182 Query: 244 ctactcgtcgctcgacgtccacctaggccagtcctactcgttccttgtgacggccgacca 303 ||| | ||| | || ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct: 155181 atacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctgatca 155122 Query: 304 gccaccgcagggctacaccattgtggtctcgacgcgcttcaccaaccccgtgctca 359 |||||| |||| ||||| |||| | |||||||| || |||||||| || ||||||| Sbjct: 155121 gccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctca 155066 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 23 gatttgaaaggcattttggacagtggtaatgaccttcccttccctgatggtctcctcatc 82 |||||| |||||||| |||||||||||||||||||||| ||||||||| || || ||| Sbjct: 155498 gatttgcaaggcattctggacagtggtaatgaccttccaccccctgatgggcttcttatc 155439 Query: 83 aatggccaaggctggaatggcaacaggttcacagtagaccaagg 126 ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 155438 aatggccaaggctggaacggcaacaggtttacagtagaccaagg 155395
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 124 agggaaaacatatcgttttcgggtgtcgaacgtcggcatctcaacttcggtgaacataag 183 ||||||||| || |||||| |||| ||||| || ||||| |||| || ||||||||||| Sbjct: 6715 agggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacataag 6656 Query: 184 gatccagggccattccttgctcctggtggaggtggagggatcacacaccatgcagaacac 243 ||| || || ||||||||||| ||||| ||||||||||||||||||||| |||||| ||| Sbjct: 6655 gattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtgcagagcac 6596 Query: 244 ctactcgtcgctcgacgtccacctaggccagtcctactcgttccttgtgacggccgacca 303 ||| | ||| | || ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct: 6595 atacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctgatca 6536 Query: 304 gccaccgcagggctacaccattgtggtctcgacgcgcttcaccaaccccgtgctca 359 |||||| |||| ||||| |||| | |||||||| || |||||||| || ||||||| Sbjct: 6535 gccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctca 6480 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 23 gatttgaaaggcattttggacagtggtaatgaccttcccttccctgatggtctcctcatc 82 |||||| |||||||| |||||||||||||||||||||| ||||||||| || || ||| Sbjct: 6912 gatttgcaaggcattctggacagtggtaatgaccttccaccccctgatgggcttcttatc 6853 Query: 83 aatggccaaggctggaatggcaacaggttcacagtagaccaagg 126 ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 6852 aatggccaaggctggaacggcaacaggtttacagtagaccaagg 6809
>ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1692 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 206 ctggtggaggtggagggatcacacaccatgcagaacacctactcgtcgctcgacgtccac 265 ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| Sbjct: 760 ctggtggaggtggaggggtcccacaccatgcagaccacctactcgtcgctcgacgtccac 819 Query: 266 ctaggccagtcctactc 282 || |||||||||||||| Sbjct: 820 ctcggccagtcctactc 836
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 206 ctggtggaggtggagggatcacacaccatgcagaacacctactcgtcgctcgacgtccac 265 ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| Sbjct: 19442752 ctggtggaggtggaggggtcccacaccatgcagaccacctactcgtcgctcgacgtccac 19442811 Query: 266 ctaggccagtcctactc 282 || |||||||||||||| Sbjct: 19442812 ctcggccagtcctactc 19442828
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 206 ctggtggaggtggagggatcacacaccatgcagaacacctactcgtcgctcgacgtccac 265 ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| Sbjct: 132290 ctggtggaggtggaggggtcccacaccatgcagaccacctactcgtcgctcgacgtccac 132349 Query: 266 ctaggccagtcctactc 282 || |||||||||||||| Sbjct: 132350 ctcggccagtcctactc 132366
>gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete sequence Length = 86100 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 56 cttcccttccctgatggtctcctcatcaatggccaaggctggaatggcaaca 107 ||||||||||||||||| || || |||||||||| || |||||||| |||| Sbjct: 72998 cttcccttccctgatggccttcttatcaatggccgtggttggaatggaaaca 73049
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence Length = 122876 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 56 cttcccttccctgatggtctcctcatcaatggccaaggctggaatggcaaca 107 ||||||||||||||||| || || |||||||||| || |||||||| |||| Sbjct: 61679 cttcccttccctgatggccttcttatcaatggccgtggttggaatggaaaca 61730
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence Length = 133030 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 56 cttcccttccctgatggtctcctcatcaatggccaaggctggaatggcaaca 107 ||||||||||||||||| || || |||||||||| || |||||||| |||| Sbjct: 60026 cttcccttccctgatggccttcttatcaatggccgtggttggaatggaaaca 59975
>emb|AL671965.6| Mouse DNA sequence from clone RP23-78G24 on chromosome 3, complete sequence Length = 43437 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 105 acaggttcacagtagaccaaggga 128 |||||||||||||||||||||||| Sbjct: 24253 acaggttcacagtagaccaaggga 24230
>gb|BT013600.1| Lycopersicon esculentum clone 132364F, mRNA sequence Length = 1918 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 1 ctggttcaagctcaaccacactgatttgaaaggcattttggacagtggtaatgaccttcc 60 |||||||||||| || ||||||||| | || | ||||| || | || ||||| ||||| Sbjct: 551 ctggttcaagctaaatcacactgatctcaaggcaattttagatggaggaaatgatcttcc 610 Query: 61 cttccctgatggtct 75 ||||||||||||||| Sbjct: 611 cttccctgatggtct 625
>gb|AY693378.1| Musa acuminata putative receptor-like protein kinase 1 gene, partial cds Length = 648 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 aggaccgaccatcgagatcgactggtctct 453 |||||||||||| |||||||||||||||| Sbjct: 143 aggaccgaccattcagatcgactggtctct 172
>ref|XM_823946.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.1500) partial mRNA Length = 1890 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 aagggaaaacatatcgttttcg 144 |||||||||||||||||||||| Sbjct: 1182 aagggaaaacatatcgttttcg 1161
>ref|XM_955844.1| Neurospora crassa OR74A hypothetical protein (NCU01380.1) partial mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tgctcctggtggaggtggagg 221 ||||||||||||||||||||| Sbjct: 813 tgctcctggtggaggtggagg 833
>ref|XM_326872.1| Neurospora crassa OR74A hypothetical protein (NCU01380.1) partial mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tgctcctggtggaggtggagg 221 ||||||||||||||||||||| Sbjct: 813 tgctcctggtggaggtggagg 833
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 ctgatggtctcctcatcaatggccaaggc 94 ||||||||||| || |||||||||||||| Sbjct: 9556 ctgatggtctcttcttcaatggccaaggc 9528
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11 Length = 79133 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tgctcctggtggaggtggagg 221 ||||||||||||||||||||| Sbjct: 40690 tgctcctggtggaggtggagg 40710
>gb|AC013401.10| Homo sapiens BAC clone RP11-98N11 from 2, complete sequence Length = 168595 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 catcaatggccaaggctggaa 99 ||||||||||||||||||||| Sbjct: 132352 catcaatggccaaggctggaa 132372
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gacagtggtaatgaccttcc 60 |||||||||||||||||||| Sbjct: 1970443 gacagtggtaatgaccttcc 1970462
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 3676122 gctcctggtggaggtggagg 3676141
>ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative ascorbate oxidase (OSJNBb0015K05.9), mRNA Length = 1722 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 gacgtccacctaggccagtcctactcgttcct 288 ||||||||| | |||||||||||||| ||||| Sbjct: 829 gacgtccacgtcggccagtcctactccttcct 860
>ref|NM_183221.2| Mus musculus FAT tumor suppressor homolog 4 (Drosophila) (Fat4), mRNA Length = 16106 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 671 gctcctggtggaggtggagg 690
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 86770 gctcctggtggaggtggagg 86751
>ref|XM_987048.1| PREDICTED: Mus musculus FAT tumor suppressor homolog 4 (Drosophila) (Fat4), mRNA Length = 15670 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 651 gctcctggtggaggtggagg 670
>gb|AC124540.4| Mus musculus BAC clone RP23-361G19 from chromosome 19, complete sequence Length = 199168 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccattccttgctcctggtgg 212 |||||||||||||||||||| Sbjct: 62113 ccattccttgctcctggtgg 62094
>ref|XM_763308.1| Giardia lamblia ATCC 50803 MAP3K beta protein kinase (GLP_9_17945_20785) partial mRNA Length = 2841 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 agaccaagggaaaacatatc 137 |||||||||||||||||||| Sbjct: 620 agaccaagggaaaacatatc 601
>gb|AC092406.3| Papio anubis clone RP41-326L21, complete sequence Length = 192030 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tttgaaaggcattttggacagtgg 48 |||||||| ||||||||||||||| Sbjct: 15617 tttgaaagtcattttggacagtgg 15594
>ref|XM_794744.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575627 (LOC575627), mRNA Length = 5493 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 3169 gctcctggtggaggtggagg 3188 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 3133 gctcctggtggaggtggagg 3152
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 gacgtccacctaggccagtcctactcgttcct 288 ||||||||| | |||||||||||||| ||||| Sbjct: 62500 gacgtccacgtcggccagtcctactccttcct 62469
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 gacgtccacctaggccagtcctactcgttcct 288 ||||||||| | |||||||||||||| ||||| Sbjct: 146150 gacgtccacgtcggccagtcctactccttcct 146119
>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 cttcccttccctgatggtctcctcatca 83 |||||||||||||||| ||| ||||||| Sbjct: 147919 cttcccttccctgatgttcttctcatca 147946
>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete sequence Length = 192031 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgatttgaaaggcattttgg 41 |||||||||||||||||||| Sbjct: 170226 tgatttgaaaggcattttgg 170207
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ccgtgctcagcaacaccgcc 370 |||||||||||||||||||| Sbjct: 1520863 ccgtgctcagcaacaccgcc 1520844
>dbj|AK029992.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932413K14 product:weakly similar to POTENTIAL PHOSPHOLIPID-TRANSPORTING ATPASE ID (EC 3.6.3.1) (FRAGMENT) [Homo sapiens], full insert sequence Length = 4705 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgatttgaaaggcattttgg 41 |||||||||||||||||||| Sbjct: 2635 tgatttgaaaggcattttgg 2616
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 gacgtccacctaggccagtcctactcgttcct 288 ||||||||| | |||||||||||||| ||||| Sbjct: 18932541 gacgtccacgtcggccagtcctactccttcct 18932572
>gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C9 map 3p, complete sequence Length = 151142 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 tccttgctcctggtggaggtggag 220 ||||| |||||||||||||||||| Sbjct: 61003 tccttactcctggtggaggtggag 60980
>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence Length = 167220 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 tccttgctcctggtggaggtggag 220 ||||| |||||||||||||||||| Sbjct: 24288 tccttactcctggtggaggtggag 24265
>ref|XM_576521.1| PREDICTED: Rattus norvegicus similar to G-protein coupled receptor 115 (LOC501106), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 caatggccaaggctggaatggcaa 105 |||||||||||||||| ||||||| Sbjct: 2302 caatggccaaggctgggatggcaa 2279
>gb|AC016240.23| Homo sapiens chromosome 8, clone RP11-27N21, complete sequence Length = 167578 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctggtggaggtggagggatc 225 |||||||||||||||||||| Sbjct: 115858 ctggtggaggtggagggatc 115877
>gb|DQ286572.1| Mus musculus Fat4 mRNA, complete cds Length = 16106 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gctcctggtggaggtggagg 221 |||||||||||||||||||| Sbjct: 671 gctcctggtggaggtggagg 690
>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete sequence Length = 180784 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ccttccctgatggtctcctc 79 |||||||||||||||||||| Sbjct: 100229 ccttccctgatggtctcctc 100210
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 gacgtccacctaggccagtcctactcgttcct 288 ||||||||| | |||||||||||||| ||||| Sbjct: 18943795 gacgtccacgtcggccagtcctactccttcct 18943826
>gb|AC069276.4| Homo sapiens chromosome 3 clone RP11-470E10 map 3p, complete sequence Length = 184058 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tccttgctcctggtggaggtggag 220 ||||| |||||||||||||||||| Sbjct: 41493 tccttactcctggtggaggtggag 41516 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,651,522 Number of Sequences: 3902068 Number of extensions: 3651522 Number of successful extensions: 74674 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74396 Number of HSP's gapped (non-prelim): 278 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
