| Clone Name | bast69b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108884.1| Zea mays PCO064378 mRNA sequence Length = 1261 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||| ||||||||||| |||| ||||||||||||||| || ||||||||||||||| Sbjct: 195 gacgaggcatccatggagcggagcatgagcttcgtcaaggcgcttcaggagctcaagaac 254 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 |||||||||||||||||||| |||||||||||||||||||||||||||||| || | | Sbjct: 255 ctgcgcccgcagctctactcggcctccgagtactgcgagaagtcctacctccgcagcgaa 314 Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375 |||||||| |||||||||||||| ||||||| ||||| | |||| | |||||||| Sbjct: 315 cagaagcaagtggtgctggacaacatgaaagattacgctgtcagggccctggtcaacgct 374 Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacct 416 |||||||| || ||||| ||||||||||||||||| ||||| Sbjct: 375 gtcgaccatcttggcacagtggcctacaagctgacagacct 415
>ref|XM_475970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 909 Score = 222 bits (112), Expect = 7e-55 Identities = 142/152 (93%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 73 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagctcaagaac 132 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||| | | Sbjct: 133 ctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctccacagcgag 192 Query: 316 cagaagcagatggtgctggacaacctgaaaga 347 |||||||||||||||||||| ||||||||||| Sbjct: 193 cagaagcagatggtgctggaaaacctgaaaga 224
>dbj|AK067538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G24, full insert sequence Length = 1227 Score = 222 bits (112), Expect = 7e-55 Identities = 142/152 (93%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 217 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagctcaagaac 276 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||| | | Sbjct: 277 ctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctccacagcgag 336 Query: 316 cagaagcagatggtgctggacaacctgaaaga 347 |||||||||||||||||||| ||||||||||| Sbjct: 337 cagaagcagatggtgctggaaaacctgaaaga 368
>gb|AY107908.1| Zea mays PCO098717 mRNA sequence Length = 1060 Score = 202 bits (102), Expect = 7e-49 Identities = 126/134 (94%) Strand = Plus / Plus Query: 217 agcaagagcttcgtcaaggccctgcaggagctcaagaacctgcgcccgcagctctactcc 276 |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 14 agcaagagcttcatcaaggccctgcaggagctcaagaacctgcggccgcagctctacacc 73 Query: 277 gcctccgagtactgcgagaagtcctacctcaacacccaccagaagcagatggtgctggac 336 |||||||||||||||||||||||||||||| ||| | | |||||||||| |||||||||| Sbjct: 74 gcctccgagtactgcgagaagtcctacctccacagcgagcagaagcagaaggtgctggac 133 Query: 337 aacctgaaagacta 350 |||||||||||||| Sbjct: 134 aacctgaaagacta 147
>ref|NM_192860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 172 bits (87), Expect = 6e-40 Identities = 189/223 (84%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 100 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 159 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | Sbjct: 160 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 219 Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375 |||||||||||||| || |||||| |||| || || || || |||| | || || || Sbjct: 220 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 279 Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418 || |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 280 gttgaccaccttggcacagttgcctacaaactgacagacctgt 322
>dbj|AK102399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092I23, full insert sequence Length = 1652 Score = 172 bits (87), Expect = 6e-40 Identities = 189/223 (84%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 540 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 599 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | Sbjct: 600 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 659 Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375 |||||||||||||| || |||||| |||| || || || || |||| | || || || Sbjct: 660 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 719 Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418 || |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 720 gttgaccaccttggcacagttgcctacaaactgacagacctgt 762
>dbj|AK064316.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C12, full insert sequence Length = 1590 Score = 172 bits (87), Expect = 6e-40 Identities = 189/223 (84%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255 |||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 456 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 515 Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315 ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | Sbjct: 516 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 575 Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375 |||||||||||||| || |||||| |||| || || || || |||| | || || || Sbjct: 576 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 635 Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418 || |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 636 gttgaccaccttggcacagttgcctacaaactgacagacctgt 678
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 239 tgcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagt 298 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 71823 tgcaggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaat 71882 Query: 299 cctacctcaacacccaccagaagcagatg 327 |||||||| ||| | | |||||||||||| Sbjct: 71883 cctacctccacagcgagcagaagcagatg 71911 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcagg 244 |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 71646 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcagg 71694
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 239 tgcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagt 298 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 28917530 tgcaggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaat 28917589 Query: 299 cctacctcaacacccaccagaagcagatg 327 |||||||| ||| | | |||||||||||| Sbjct: 28917590 cctacctccacagcgagcagaagcagatg 28917618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcagg 244 |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 28917353 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcagg 28917401
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 240 gcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagtc 299 ||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 24842231 gcaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtc 24842172 Query: 300 ctacctcaacacccaccagaagcagatg 327 |||||| ||| | | |||||||||||| Sbjct: 24842171 gtacctccacagcgagcagaagcagatg 24842144 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 24842405 gacgaggcgtccatggagcggagcaagagcttcgtcaaggc 24842365
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 240 gcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagtc 299 ||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 65351 gcaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtc 65292 Query: 300 ctacctcaacacccaccagaagcagatg 327 |||||| ||| | | |||||||||||| Sbjct: 65291 gtacctccacagcgagcagaagcagatg 65264 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 65525 gacgaggcgtccatggagcggagcaagagcttcgtcaaggc 65485
>ref|NM_130185.2| Arabidopsis thaliana ABI1L1 AT2G46225 (ABI1L1) mRNA, complete cds Length = 1276 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253 ||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct: 221 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 280 Query: 254 ac 255 || Sbjct: 281 ac 282
>emb|BX820174.1|CNS0A8HE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1225 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253 ||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct: 176 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 235 Query: 254 ac 255 || Sbjct: 236 ac 237
>gb|AY085146.1| Arabidopsis thaliana clone 13319 mRNA, complete sequence Length = 1263 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253 ||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct: 211 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 270 Query: 254 ac 255 || Sbjct: 271 ac 272
>dbj|AK118876.1| Arabidopsis thaliana At2g46225 mRNA for unknown protein, complete cds, clone: RAFL21-20-O20 Length = 1220 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253 ||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct: 221 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 280 Query: 254 ac 255 || Sbjct: 281 ac 282
>gb|AY817012.1| Arabidopsis thaliana Abl interactor-like protein-1 (ABIL1) mRNA, complete cds Length = 897 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253 ||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| Sbjct: 44 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 103 Query: 254 ac 255 || Sbjct: 104 ac 105
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236 ||||||||| |||||||| |||| |||||||||||| ||||| Sbjct: 41412 tggacgaggtttccatggaacgcaacaagagcttcgttaaggc 41370
>ref|XM_391830.2| PREDICTED: Apis mellifera similar to CG15013-PA, isoform A (LOC408277), mRNA Length = 2137 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ctccactcacttcctcttctt 53 ||||||||||||||||||||| Sbjct: 2116 ctccactcacttcctcttctt 2136
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 263 cgcagctctactccgcctccgagtactgcgag 294 |||| ||||||| |||||||||||||| |||| Sbjct: 73536 cgcacctctactacgcctccgagtacttcgag 73505
>gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome 5, complete sequence Length = 194291 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 6549 cccaccagaagcagatggtg 6530
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 389084 cccaccagaagcagatggtg 389103
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 6.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 218 gcaagagcttcgtc-aaggccctgcagg 244 |||||||||||||| ||||||||||||| Sbjct: 4694974 gcaagagcttcgtcaaaggccctgcagg 4694947
>ref|XM_414214.1| PREDICTED: Gallus gallus similar to Fanconi anemia group A protein (FACA protein) (LOC415854), mRNA Length = 3061 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 ccaccagaagcagatggtgctgga 335 |||||||||||||| ||||||||| Sbjct: 1487 ccaccagaagcagaaggtgctgga 1464
>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence Length = 213155 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 83518 cccaccagaagcagatggtg 83537
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ggtggacgaggcctccatgg 211 |||||||||||||||||||| Sbjct: 1687800 ggtggacgaggcctccatgg 1687819
>ref|XM_988042.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 4 (Mll3), mRNA Length = 7470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 1365 cccaccagaagcagatggtg 1346
>ref|XM_987930.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 1 (Mll3), mRNA Length = 12349 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 6550 cccaccagaagcagatggtg 6531
>ref|XM_988073.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 5 (Mll3), mRNA Length = 15684 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 9501 cccaccagaagcagatggtg 9482
>ref|XM_988107.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 6 (Mll3), mRNA Length = 16826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 10802 cccaccagaagcagatggtg 10783
>ref|XM_001002529.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 4 (Mll3), mRNA Length = 12349 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 6550 cccaccagaagcagatggtg 6531
>ref|XM_907514.2| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, transcript variant 2 (Mll3), mRNA Length = 16820 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 10796 cccaccagaagcagatggtg 10777
>ref|XM_982326.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3 (Mll3), mRNA Length = 16419 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 10395 cccaccagaagcagatggtg 10376
>ref|XM_838099.1| Leishmania major strain Friedlin NADH-dependent fumarate reductase-like protein (LMJ_1015) partial mRNA Length = 3585 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 3137 cccaccagaagcagatggtg 3156
>ref|XM_741354.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g02610) partial mRNA Length = 672 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cctgcaggagctcaagaacc 256 |||||||||||||||||||| Sbjct: 393 cctgcaggagctcaagaacc 412
>gb|BC022622.1| Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, mRNA (cDNA clone IMAGE:4192553), partial cds Length = 1688 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 1427 cccaccagaagcagatggtg 1408
>gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complete sequence Length = 188794 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 25126 cccaccagaagcagatggtg 25107
>gb|AY138582.1| Mus musculus mixed-lineage leukemia 3 protein (Mll3) mRNA, partial cds Length = 10580 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 6624 cccaccagaagcagatggtg 6605
>emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on chromosome 11 Contains the 3' end of the Myh3 gene for embryonic skeletal muscle myosin heavy polypeptide 3, four novel genes (2310065F04Rik), the Myh2 gene for adult skeletal muscle myosin heavy polypeptide 2, the Myh1 gene for adult skeletal muscle myosin heavy polypeptide 1, the Myh4 gene for skeletal muscle myosin heavy polypeptide 4 and the Myh8 gene for perinatal skeletal muscle myosin heavy polypeptide 8 (4832426G23Rik), complete sequence Length = 221384 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 agatggtgctggacaacctg 342 |||||||||||||||||||| Sbjct: 61334 agatggtgctggacaacctg 61353
>dbj|AK033338.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030496P13 product:hypothetical Glutamine-rich region containing protein, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 2075 cccaccagaagcagatggtg 2056
>dbj|AK129377.1| Mus musculus mRNA for mKIAA1506 protein Length = 6432 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 330 cccaccagaagcagatggtg 311
>gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, complete sequence Length = 207364 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 29718 cccaccagaagcagatggtg 29737
>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 139597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cccaccagaagcagatggtg 330 |||||||||||||||||||| Sbjct: 75299 cccaccagaagcagatggtg 75280 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,801,593 Number of Sequences: 3902068 Number of extensions: 2801593 Number of successful extensions: 52224 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 52056 Number of HSP's gapped (non-prelim): 169 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)