ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108884.1| Zea mays PCO064378 mRNA sequence 224 2e-55
2ref|XM_475970.1| Oryza sativa (japonica cultivar-group), predic... 222 7e-55
3dbj|AK067538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 7e-55
4gb|AY107908.1| Zea mays PCO098717 mRNA sequence 202 7e-49
5ref|NM_192860.1| Oryza sativa (japonica cultivar-group), predic... 172 6e-40
6dbj|AK102399.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
7dbj|AK064316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
8gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
11dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
12ref|NM_130185.2| Arabidopsis thaliana ABI1L1 AT2G46225 (ABI1L1) ... 68 3e-08
13emb|BX820174.1|CNS0A8HE Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
14gb|AY085146.1| Arabidopsis thaliana clone 13319 mRNA, complete s... 68 3e-08
15dbj|AK118876.1| Arabidopsis thaliana At2g46225 mRNA for unknown ... 68 3e-08
16gb|AY817012.1| Arabidopsis thaliana Abl interactor-like protein-... 68 3e-08
17gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map... 46 0.097
18ref|XM_391830.2| PREDICTED: Apis mellifera similar to CG15013-PA... 42 1.5
19gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.0
20gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome... 40 6.0
21gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 6.0
22gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.0
23ref|XM_414214.1| PREDICTED: Gallus gallus similar to Fanconi ane... 40 6.0
24gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, com... 40 6.0
25gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.0
26ref|XM_988042.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
27ref|XM_987930.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
28ref|XM_988073.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
29ref|XM_988107.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
30ref|XM_001002529.1| PREDICTED: Mus musculus myeloid/lymphoid or ... 40 6.0
31ref|XM_907514.2| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
32ref|XM_982326.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.0
33ref|XM_838099.1| Leishmania major strain Friedlin NADH-dependent... 40 6.0
34ref|XM_741354.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.0
35gb|BC022622.1| Mus musculus myeloid/lymphoid or mixed-lineage le... 40 6.0
36gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complet... 40 6.0
37gb|AY138582.1| Mus musculus mixed-lineage leukemia 3 protein (Ml... 40 6.0
38emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on ch... 40 6.0
39dbj|AK033338.1| Mus musculus 15 days embryo male testis cDNA, RI... 40 6.0
40dbj|AK129377.1| Mus musculus mRNA for mKIAA1506 protein 40 6.0
41gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, co... 40 6.0
42emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones... 40 6.0

>gb|AY108884.1| Zea mays PCO064378 mRNA sequence
          Length = 1261

 Score =  224 bits (113), Expect = 2e-55
 Identities = 194/221 (87%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||| ||||||||||| |||| ||||||||||||||| || |||||||||||||||
Sbjct: 195 gacgaggcatccatggagcggagcatgagcttcgtcaaggcgcttcaggagctcaagaac 254

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           |||||||||||||||||||| ||||||||||||||||||||||||||||||  || | | 
Sbjct: 255 ctgcgcccgcagctctactcggcctccgagtactgcgagaagtcctacctccgcagcgaa 314

                                                                       
Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375
           ||||||||  |||||||||||||| ||||||| |||||  |  ||||  | |||||||| 
Sbjct: 315 cagaagcaagtggtgctggacaacatgaaagattacgctgtcagggccctggtcaacgct 374

                                                    
Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacct 416
           |||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 375 gtcgaccatcttggcacagtggcctacaagctgacagacct 415



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>ref|XM_475970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 909

 Score =  222 bits (112), Expect = 7e-55
 Identities = 142/152 (93%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 73  gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagctcaagaac 132

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||| | | 
Sbjct: 133 ctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctccacagcgag 192

                                           
Query: 316 cagaagcagatggtgctggacaacctgaaaga 347
           |||||||||||||||||||| |||||||||||
Sbjct: 193 cagaagcagatggtgctggaaaacctgaaaga 224



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>dbj|AK067538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G24, full
           insert sequence
          Length = 1227

 Score =  222 bits (112), Expect = 7e-55
 Identities = 142/152 (93%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 217 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcaggagctcaagaac 276

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||| | | 
Sbjct: 277 ctgcggcctcagctctactccgcctccgagtactgcgagaaatcctacctccacagcgag 336

                                           
Query: 316 cagaagcagatggtgctggacaacctgaaaga 347
           |||||||||||||||||||| |||||||||||
Sbjct: 337 cagaagcagatggtgctggaaaacctgaaaga 368



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>gb|AY107908.1| Zea mays PCO098717 mRNA sequence
          Length = 1060

 Score =  202 bits (102), Expect = 7e-49
 Identities = 126/134 (94%)
 Strand = Plus / Plus

                                                                       
Query: 217 agcaagagcttcgtcaaggccctgcaggagctcaagaacctgcgcccgcagctctactcc 276
           |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 14  agcaagagcttcatcaaggccctgcaggagctcaagaacctgcggccgcagctctacacc 73

                                                                       
Query: 277 gcctccgagtactgcgagaagtcctacctcaacacccaccagaagcagatggtgctggac 336
           |||||||||||||||||||||||||||||| ||| | | |||||||||| ||||||||||
Sbjct: 74  gcctccgagtactgcgagaagtcctacctccacagcgagcagaagcagaaggtgctggac 133

                         
Query: 337 aacctgaaagacta 350
           ||||||||||||||
Sbjct: 134 aacctgaaagacta 147



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>ref|NM_192860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 921

 Score =  172 bits (87), Expect = 6e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 100 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 159

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | 
Sbjct: 160 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 219

                                                                       
Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375
           |||||||||||||| || |||||| |||| || || ||  || ||||  | || || || 
Sbjct: 220 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 279

                                                      
Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418
           || |||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 280 gttgaccaccttggcacagttgcctacaaactgacagacctgt 322



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>dbj|AK102399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092I23, full
           insert sequence
          Length = 1652

 Score =  172 bits (87), Expect = 6e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 540 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 599

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | 
Sbjct: 600 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 659

                                                                       
Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375
           |||||||||||||| || |||||| |||| || || ||  || ||||  | || || || 
Sbjct: 660 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 719

                                                      
Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418
           || |||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 720 gttgaccaccttggcacagttgcctacaaactgacagacctgt 762



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>dbj|AK064316.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C12, full
           insert sequence
          Length = 1590

 Score =  172 bits (87), Expect = 6e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 196 gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaagaac 255
           |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 456 gacgaggcgtccatggagcggagcaagagcttcgtcaaggcgctccaggagctcaagaac 515

                                                                       
Query: 256 ctgcgcccgcagctctactccgcctccgagtactgcgagaagtcctacctcaacacccac 315
           ||||| |||||||||||||| || || ||||||||||||||||| |||||| ||| | | 
Sbjct: 516 ctgcggccgcagctctactcggcgtcggagtactgcgagaagtcgtacctccacagcgag 575

                                                                       
Query: 316 cagaagcagatggtgctggacaacctgaaagactacgcgatgcgggcggttgtcaacgcc 375
           |||||||||||||| || |||||| |||| || || ||  || ||||  | || || || 
Sbjct: 576 cagaagcagatggttctagacaacttgaaggattatgctgtgagggctttggtgaatgcg 635

                                                      
Query: 376 gtcgaccacctaggcacggtggcctacaagctgacggacctgt 418
           || |||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 636 gttgaccaccttggcacagttgcctacaaactgacagacctgt 678



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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score =  121 bits (61), Expect = 2e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                         
Query: 239   tgcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagt 298
             |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 71823 tgcaggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaat 71882

                                          
Query: 299   cctacctcaacacccaccagaagcagatg 327
             |||||||| ||| | | ||||||||||||
Sbjct: 71883 cctacctccacagcgagcagaagcagatg 71911



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 196   gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcagg 244
             |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 71646 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcagg 71694



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  121 bits (61), Expect = 2e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                            
Query: 239      tgcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagt 298
                |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 28917530 tgcaggagctcaagaacctgcggcctcagctctactccgcctccgagtactgcgagaaat 28917589

                                             
Query: 299      cctacctcaacacccaccagaagcagatg 327
                |||||||| ||| | | ||||||||||||
Sbjct: 28917590 cctacctccacagcgagcagaagcagatg 28917618



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                                 
Query: 196      gacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcagg 244
                |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 28917353 gacgaggcctccatggagcggagcaagagcttcgtcaaggcactgcagg 28917401



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 240      gcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagtc 299
                ||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 24842231 gcaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtc 24842172

                                            
Query: 300      ctacctcaacacccaccagaagcagatg 327
                 |||||| ||| | | ||||||||||||
Sbjct: 24842171 gtacctccacagcgagcagaagcagatg 24842144



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                         
Query: 196      gacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236
                |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 24842405 gacgaggcgtccatggagcggagcaagagcttcgtcaaggc 24842365



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>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0501G01
          Length = 154561

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                         
Query: 240   gcaggagctcaagaacctgcgcccgcagctctactccgcctccgagtactgcgagaagtc 299
             ||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 65351 gcaggagctcaagaacctgcggccgcagctctactcggcgtcggagtactgcgagaagtc 65292

                                         
Query: 300   ctacctcaacacccaccagaagcagatg 327
              |||||| ||| | | ||||||||||||
Sbjct: 65291 gtacctccacagcgagcagaagcagatg 65264



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 196   gacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236
             |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 65525 gacgaggcgtccatggagcggagcaagagcttcgtcaaggc 65485



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>ref|NM_130185.2| Arabidopsis thaliana ABI1L1 AT2G46225 (ABI1L1) mRNA, complete cds
          Length = 1276

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253
           |||||||||  |||||||| |||| |||||||||||| |||||  |||||||||||||||
Sbjct: 221 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 280

             
Query: 254 ac 255
           ||
Sbjct: 281 ac 282



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>emb|BX820174.1|CNS0A8HE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS87ZD02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1225

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253
           |||||||||  |||||||| |||| |||||||||||| |||||  |||||||||||||||
Sbjct: 176 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 235

             
Query: 254 ac 255
           ||
Sbjct: 236 ac 237



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>gb|AY085146.1| Arabidopsis thaliana clone 13319 mRNA, complete sequence
          Length = 1263

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253
           |||||||||  |||||||| |||| |||||||||||| |||||  |||||||||||||||
Sbjct: 211 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 270

             
Query: 254 ac 255
           ||
Sbjct: 271 ac 272



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>dbj|AK118876.1| Arabidopsis thaliana At2g46225 mRNA for unknown protein, complete
           cds, clone: RAFL21-20-O20
          Length = 1220

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253
           |||||||||  |||||||| |||| |||||||||||| |||||  |||||||||||||||
Sbjct: 221 tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 280

             
Query: 254 ac 255
           ||
Sbjct: 281 ac 282



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>gb|AY817012.1| Arabidopsis thaliana Abl interactor-like protein-1 (ABIL1) mRNA,
           complete cds
          Length = 897

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 194 tggacgaggcctccatggagcgcagcaagagcttcgtcaaggccctgcaggagctcaaga 253
           |||||||||  |||||||| |||| |||||||||||| |||||  |||||||||||||||
Sbjct: 44  tggacgaggtttccatggaacgcaacaagagcttcgttaaggcattgcaggagctcaaga 103

             
Query: 254 ac 255
           ||
Sbjct: 104 ac 105



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>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
             sequence
          Length = 110149

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 194   tggacgaggcctccatggagcgcagcaagagcttcgtcaaggc 236
             |||||||||  |||||||| |||| |||||||||||| |||||
Sbjct: 41412 tggacgaggtttccatggaacgcaacaagagcttcgttaaggc 41370



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>ref|XM_391830.2| PREDICTED: Apis mellifera similar to CG15013-PA, isoform A
            (LOC408277), mRNA
          Length = 2137

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   ctccactcacttcctcttctt 53
            |||||||||||||||||||||
Sbjct: 2116 ctccactcacttcctcttctt 2136



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 263   cgcagctctactccgcctccgagtactgcgag 294
             |||| ||||||| |||||||||||||| ||||
Sbjct: 73536 cgcacctctactacgcctccgagtacttcgag 73505



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>gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome 5, complete
            sequence
          Length = 194291

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 6549 cccaccagaagcagatggtg 6530



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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    cccaccagaagcagatggtg 330
              ||||||||||||||||||||
Sbjct: 389084 cccaccagaagcagatggtg 389103



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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                           
Query: 218     gcaagagcttcgtc-aaggccctgcagg 244
               |||||||||||||| |||||||||||||
Sbjct: 4694974 gcaagagcttcgtcaaaggccctgcagg 4694947



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>ref|XM_414214.1| PREDICTED: Gallus gallus similar to Fanconi anemia group A protein
            (FACA protein) (LOC415854), mRNA
          Length = 3061

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 312  ccaccagaagcagatggtgctgga 335
            |||||||||||||| |||||||||
Sbjct: 1487 ccaccagaagcagaaggtgctgga 1464



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>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence
          Length = 213155

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 83518 cccaccagaagcagatggtg 83537



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     ggtggacgaggcctccatgg 211
               ||||||||||||||||||||
Sbjct: 1687800 ggtggacgaggcctccatgg 1687819



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>ref|XM_988042.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
            transcript variant 4 (Mll3), mRNA
          Length = 7470

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 1365 cccaccagaagcagatggtg 1346



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>ref|XM_987930.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
            transcript variant 1 (Mll3), mRNA
          Length = 12349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 6550 cccaccagaagcagatggtg 6531



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>ref|XM_988073.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
            transcript variant 5 (Mll3), mRNA
          Length = 15684

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 9501 cccaccagaagcagatggtg 9482



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>ref|XM_988107.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
             transcript variant 6 (Mll3), mRNA
          Length = 16826

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 10802 cccaccagaagcagatggtg 10783



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>ref|XM_001002529.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
            transcript variant 4 (Mll3), mRNA
          Length = 12349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 6550 cccaccagaagcagatggtg 6531



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>ref|XM_907514.2| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3,
             transcript variant 2 (Mll3), mRNA
          Length = 16820

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 10796 cccaccagaagcagatggtg 10777



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>ref|XM_982326.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3
             (Mll3), mRNA
          Length = 16419

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 10395 cccaccagaagcagatggtg 10376



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>ref|XM_838099.1| Leishmania major strain Friedlin NADH-dependent fumarate
            reductase-like protein (LMJ_1015) partial mRNA
          Length = 3585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 3137 cccaccagaagcagatggtg 3156



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>ref|XM_741354.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g02610)
           partial mRNA
          Length = 672

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 cctgcaggagctcaagaacc 256
           ||||||||||||||||||||
Sbjct: 393 cctgcaggagctcaagaacc 412



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>gb|BC022622.1| Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3, mRNA (cDNA
            clone IMAGE:4192553), partial cds
          Length = 1688

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 1427 cccaccagaagcagatggtg 1408



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>gb|AC127319.4| Mus musculus BAC clone RP23-229N3 from 5, complete sequence
          Length = 188794

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 25126 cccaccagaagcagatggtg 25107



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>gb|AY138582.1| Mus musculus mixed-lineage leukemia 3 protein (Mll3) mRNA, partial
            cds
          Length = 10580

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 6624 cccaccagaagcagatggtg 6605



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>emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on chromosome 11 Contains the
             3' end of the Myh3 gene for embryonic skeletal muscle
             myosin heavy polypeptide 3, four novel genes
             (2310065F04Rik), the Myh2 gene for adult skeletal muscle
             myosin heavy polypeptide 2, the Myh1 gene for adult
             skeletal muscle myosin heavy polypeptide 1, the Myh4 gene
             for skeletal muscle  myosin heavy polypeptide 4 and the
             Myh8 gene for perinatal skeletal muscle myosin heavy
             polypeptide 8 (4832426G23Rik), complete sequence
          Length = 221384

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   agatggtgctggacaacctg 342
             ||||||||||||||||||||
Sbjct: 61334 agatggtgctggacaacctg 61353



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>dbj|AK033338.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:8030496P13 product:hypothetical
            Glutamine-rich region containing protein, full insert
            sequence
          Length = 2293

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  cccaccagaagcagatggtg 330
            ||||||||||||||||||||
Sbjct: 2075 cccaccagaagcagatggtg 2056



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>dbj|AK129377.1| Mus musculus mRNA for mKIAA1506 protein
          Length = 6432

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 cccaccagaagcagatggtg 330
           ||||||||||||||||||||
Sbjct: 330 cccaccagaagcagatggtg 311



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>gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, complete sequence
          Length = 207364

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 29718 cccaccagaagcagatggtg 29737



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>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480,
             incomplete shotgun, assembled reads, with VERY preliminary
             annotation, complete sequence
          Length = 139597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cccaccagaagcagatggtg 330
             ||||||||||||||||||||
Sbjct: 75299 cccaccagaagcagatggtg 75280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,801,593
Number of Sequences: 3902068
Number of extensions: 2801593
Number of successful extensions: 52224
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52056
Number of HSP's gapped (non-prelim): 169
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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