ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69b02 |
|---|---|
| Clone Library Name | barley_pub |
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 65.1 bits (157), Expect = 8e-11 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 12/130 (9%) Frame = +2 Query: 5 SVEAGVGAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESP 184 +V + AG+DM M Y++++ L +K+ + M+ ++DA +L VK+ MGLF P Sbjct: 306 AVRVALKAGVDMSMADEYYSKYLPGL---IKSGKVTMAELDDATRHVLNVKYDMGLFNDP 362 Query: 185 YADPSLVGELGKQE------------HRDLAREAVRKSLVLLKNGKSASTPLLPLPKKAG 328 Y+ LG +E HR ARE R+S+VLLKN LPL KK+G Sbjct: 363 YS------HLGPKESDPVDTNAESRLHRKEAREVARESVVLLKN----RLETLPL-KKSG 411 Query: 329 KILVAGSHAD 358 I V G AD Sbjct: 412 TIAVVGPLAD 421
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 60.5 bits (145), Expect = 2e-09 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 12/130 (9%) Frame = +2 Query: 5 SVEAGVGAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESP 184 +V + +GI+M M Y++++ L +K+ + M+ ++DA +L VK+ MGLF P Sbjct: 306 AVRVALKSGINMSMSDEYYSKYLPGL---IKSGKVTMAELDDAARHVLNVKYDMGLFNDP 362 Query: 185 YADPSLVGELGKQE------------HRDLAREAVRKSLVLLKNGKSASTPLLPLPKKAG 328 Y+ LG +E HR ARE R+SLVLLKN LPL KK+ Sbjct: 363 YS------HLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN----RLETLPL-KKSA 411 Query: 329 KILVAGSHAD 358 I V G AD Sbjct: 412 TIAVVGPLAD 421
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 47.8 bits (112), Expect = 1e-05 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Frame = +2 Query: 80 LTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGEL-GKQEHRDLAREAVR 256 L V++ + +R++ +V RIL+ KF GLFE PY + + ++ G+ + + LA + Sbjct: 419 LVQAVQDGKLTEARLDTSVNRILKQKFQTGLFERPYVNATQANDIVGRADWQQLADDTQA 478 Query: 257 KSLVLLKNGKSASTPLLPLPKKAGKIL--VAGSHADDLG 367 +SLVLL+N LLPL K + L +A + A ++G Sbjct: 479 RSLVLLQNNN-----LLPLRKGSRVWLHGIAANAAQEVG 512
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 37.7 bits (86), Expect = 0.014 Identities = 36/112 (32%), Positives = 58/112 (51%) Frame = +2 Query: 14 AGVGAGIDMIMVPFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYAD 193 +G+ AG+D+ M P ++ + VK+ + + +N AV RIL+V M L + Sbjct: 240 SGLDAGLDLEM-PTSHGITDKKIVEAVKSGKLSENILNRAVERILKV-IIMAL-----EN 292 Query: 194 PSLVGELGKQEHRDLAREAVRKSLVLLKNGKSASTPLLPLPKKAGKILVAGS 349 + + H LAR+A +S+VLLKN +LPL KK+G I + G+ Sbjct: 293 KKENAQYEQDAHHRLARQAAAESMVLLKN----EDDVLPL-KKSGTIALIGA 339
>RUVB1_CRYNE (Q5KPZ8) RuvB-like helicase 1 (EC 3.6.1.-)| Length = 484 Score = 32.3 bits (72), Expect = 0.61 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +2 Query: 164 MGLFESPYADPSLVGELGKQEHRDLAREAVRKSLVLLKNGKSASTPLLPL-PKKAGKILV 340 +GL + A S G +G+ LAREA+ L LLK GK + PLL + P GK + Sbjct: 41 LGLADDGTAMSSSQGFIGQI----LAREALGLHLSLLKGGKYSGRPLLLVGPPGTGKTAL 96 Query: 341 AGSHADDLGNQ 373 A + + +LG++ Sbjct: 97 ALALSQELGSK 107
>LARG2_CHICK (Q66PG4) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 739 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 363 WATSAEDGPSHGKDRPXTTKLPGRRSFRR 449 WA SAEDGP G +R T P +R R+ Sbjct: 89 WAASAEDGPPLGGERNNRTACPEQRMVRK 117
>LONH_ARCFU (O29883) Putative protease La homolog type (EC 3.4.21.-)| Length = 621 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Frame = +2 Query: 8 VEAGVGAGIDMIMVPFAYTEFIDDLT----YQVKNNIIPMSRINDAVYRIL 148 +EA + AG+ +++P + IDD+ ++ K +IP+SRIN+ + +L Sbjct: 553 IEAAIQAGLKKVIIP---KDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL 600
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/31 (51%), Positives = 16/31 (51%) Frame = -2 Query: 194 GQHRGSQIDPW*TSP*ESCRQHR*FCSWG*C 102 G H SQI PW TS SCR H C G C Sbjct: 1323 GHHNQSQIQPWSTSS-RSCRPHLFDCQDGEC 1352
>CATA_DESVM (Q9ZN99) Catalase (EC 1.11.1.6)| Length = 479 Score = 30.0 bits (66), Expect = 3.0 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 236 DRGVPASRVHQRGLGQHRGSQIDP 165 DRG+PAS H G G H S I P Sbjct: 181 DRGIPASYRHMHGFGSHTFSFISP 204
>PSBU_SYNPX (Q7U480) Photosystem II 12 kDa extrinsic protein precursor (PS II| complex 12 kDa extrinsic protein) (PSII-U) Length = 135 Score = 29.6 bits (65), Expect = 3.9 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = +2 Query: 179 SPYADPSLVGELGKQEHRDLARE--AVRKSLVLLKNGKSASTPLLP--LPKKAGKILVAG 346 S +AD LVG+ E R++A + A R+ V L N P P AGKI++ G Sbjct: 26 SVHADEDLVGKYSGNEIRNIADDKIAAREGKVDLNNSSVRRFQQFPGMYPTMAGKIVLGG 85 Query: 347 SHAD 358 + D Sbjct: 86 PYND 89
>GPMI_CLOPE (Q8XKU2) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 512 Score = 29.6 bits (65), Expect = 3.9 Identities = 25/92 (27%), Positives = 42/92 (45%) Frame = +2 Query: 83 TYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEHRDLAREAVRKS 262 TY +K + ++ + R+ + K+ M + +A+P +VG G QE A EAV + Sbjct: 364 TYDLKPEMSAYEVTDELINRLDQDKYDMIILN--FANPDMVGHTGVQEAAVKAIEAVDEC 421 Query: 263 LVLLKNGKSASTPLLPLPKKAGKILVAGSHAD 358 L GK A L +K G + + H + Sbjct: 422 L-----GKVADKVL----EKEGTLFITADHGN 444
>LONH1_THEAC (Q9HJ89) Putative protease La homolog type 1 (EC 3.4.21.-)| Length = 657 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 8 VEAGVGAGIDMIMVP-FAYTEFIDDLTYQVKNNIIPMSRINDAV 136 VEA + AG++ ++VP Y++ I D + K IIP I D + Sbjct: 569 VEAAIEAGLNKVIVPELNYSDIILDADHVNKIEIIPAKTIEDVL 612
>PSTB_METKA (Q8TUR7) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 254 Score = 29.3 bits (64), Expect = 5.1 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +2 Query: 50 PFAYTEFIDDLTYQVKNNIIPMSRINDAVYRILRVKFTMGLFESPYADPSLVGELGKQEH 229 PF + D++ Y ++ + I D VY L + E DP+ G+Q+ Sbjct: 97 PFPWMSIYDNVAYGLRLMGMDEDEIEDRVYEALEKAALLDQVEDRLDDPASALSGGQQQR 156 Query: 230 RDLARE-AVRKSLVLLKNGKSASTPL 304 +AR A+R ++L+ S P+ Sbjct: 157 LCIARALAMRPEVLLMDEPTSDLDPI 182
>CYAA_SCHPO (P14605) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 1692 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -2 Query: 245 HEQDRGVPASRVHQRGLGQHRGSQIDPW 162 + D G+PAS H L HR S PW Sbjct: 215 NSDDDGIPASAAHILDLDYHRDSYDSPW 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,082,573 Number of Sequences: 219361 Number of extensions: 1461671 Number of successful extensions: 3887 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3885 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
