>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 7/10
          Length = 349575

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     gcagcctcagcaggtgcagcc 75
              |||||||||||||||||||||
Sbjct: 217221 gcagcctcagcaggtgcagcc 217201

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      gcagcctcagcaggtgcagcc 75
               |||||||||||||||||||||
Sbjct: 2340525 gcagcctcagcaggtgcagcc 2340505

>gb|BT016733.1| Zea mays clone Contig566 mRNA sequence
          Length = 1342

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 71  cagccggcggcggccttcggggacaccacgct 102
           |||||| ||||| | |||||||||||||||||
Sbjct: 112 cagccgccggcgccgttcggggacaccacgct 143

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      aggtgcagccggcggcggcc 85
               ||||||||||||||||||||
Sbjct: 3582306 aggtgcagccggcggcggcc 3582287

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     aacaggccggacatgacgatgctg 52
              |||||||||| |||||||||||||
Sbjct: 957033 aacaggccgggcatgacgatgctg 957010

>gb|AY495828.1| Oryctolagus cuniculus clone 196O2 kappa 1 light chain immunglobulin
             gene region
          Length = 178084

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cagcctcagcaggtgcagcc 75
             ||||||||||||||||||||
Sbjct: 33928 cagcctcagcaggtgcagcc 33909

>gb|AY495826.1| Oryctolagus cuniculus clone 215M22 kappa 1 light chain immunglobulin
             gene region
          Length = 141991

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cagcctcagcaggtgcagcc 75
             ||||||||||||||||||||
Sbjct: 52538 cagcctcagcaggtgcagcc 52519

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 21      gccggaagaacaggccgga 39
               |||||||||||||||||||
Sbjct: 2338584 gccggaagaacaggccgga 2338566

>ref|XM_470664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1020

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 70 gcagccggcggcggccttcggggacac 96
          ||||||||||||||| ||||| |||||
Sbjct: 63 gcagccggcggcggcgttcggtgacac 89

>ref|XM_476873.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1311

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 67 ggtgcagccggcggcggcc 85
          |||||||||||||||||||
Sbjct: 60 ggtgcagccggcggcggcc 78

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 62      cagcaggtgcagccggcggcggc 84
               ||||||| |||||||||||||||
Sbjct: 2061692 cagcaggagcagccggcggcggc 2061714

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     ggtgcagccggcggcggcc 85
              |||||||||||||||||||
Sbjct: 416297 ggtgcagccggcggcggcc 416315

>ref|XM_592943.2| PREDICTED: Bos taurus similar to Zinc finger protein 384 (Nuclear
            matrix transcription factor 4) (CAG repeat protein 1),
            transcript variant 1 (LOC515007), mRNA
          Length = 2833

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 62   cagcaggtgcagccggcggcggc 84
            |||||||||||| ||||||||||
Sbjct: 1573 cagcaggtgcaggcggcggcggc 1595

>ref|XM_878085.1| PREDICTED: Bos taurus similar to Zinc finger protein 384 (Nuclear
            matrix transcription factor 4) (CAG repeat protein 1),
            transcript variant 5 (LOC515007), mRNA
          Length = 2302

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 62   cagcaggtgcagccggcggcggc 84
            |||||||||||| ||||||||||
Sbjct: 1042 cagcaggtgcaggcggcggcggc 1064

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 70      gcagccggcggcggccttcggggacac 96
               ||||||||||||||| ||||| |||||
Sbjct: 9852573 gcagccggcggcggcgttcggtgacac 9852547

>ref|XM_391626.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical
           protein (FG11450.1) partial mRNA
          Length = 1239

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  gcctcagcaggtgcagccg 76
           |||||||||||||||||||
Sbjct: 149 gcctcagcaggtgcagccg 131

>emb|AL450465.12| Human DNA sequence from clone RP3-493M24 on chromosome 20 Contains ESTs
             and GSSs, complete sequence
          Length = 47139

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    gatgctggggcagcctcag 64
             |||||||||||||||||||
Sbjct: 34410 gatgctggggcagcctcag 34428

>emb|AL365209.13| Human DNA sequence from clone RP11-174G17 on chromosome 1 Contains 5'
             end of a  novel gene, 5' end of a gene for a novel protein
             and a CpG island, complete sequence
          Length = 115291

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    gcagcctcagcaggtgcag 73
             |||||||||||||||||||
Sbjct: 73595 gcagcctcagcaggtgcag 73613

>emb|AL096828.29|HSJ963E22 Human DNA sequence from clone RP5-963E22 on chromosome 20 Contains the
             C20orf21 gene for a novel protein similar to
             high-gluose-regulated protein 8 (HGRG8) and five CpG
             islands, complete sequence
          Length = 140152

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    ggcagcctcagcaggtgca 72
             |||||||||||||||||||
Sbjct: 85860 ggcagcctcagcaggtgca 85842

>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              1/7
          Length = 340806

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     cggaagaacaggccggaca 41
              |||||||||||||||||||
Sbjct: 312932 cggaagaacaggccggaca 312914

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 70     gcagccggcggcggccttcggggacaccacg 100
              ||||||||||| ||||| ||||||| |||||
Sbjct: 539183 gcagccggcggtggcctgcggggaccccacg 539213

>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     agccggcggcggccttcgg 90
              |||||||||||||||||||
Sbjct: 124026 agccggcggcggccttcgg 124044

>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 23      cggaagaacaggccggaca 41
               |||||||||||||||||||
Sbjct: 2215842 cggaagaacaggccggaca 2215860

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 67      ggtgcagccggcggcggcc 85
               |||||||||||||||||||
Sbjct: 4358563 ggtgcagccggcggcggcc 4358545

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 70      gcagccggcggcggccttcggggacac 96
               ||||||||||||||| ||||| |||||
Sbjct: 9850694 gcagccggcggcggcgttcggtgacac 9850668

>ref|XM_213838.2| PREDICTED: Rattus norvegicus F-box and WD-40 domain protein 9
            (predicted) (Fbxw9_predicted), mRNA
          Length = 1834

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   ctggggcagcctcagcagg 68
            |||||||||||||||||||
Sbjct: 1437 ctggggcagcctcagcagg 1419

>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 70    gcagccggcggcggccttcggggacac 96
             ||||||||||||||| ||||| |||||
Sbjct: 14962 gcagccggcggcggcgttcggtgacac 14936

>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 70    gcagccggcggcggccttcggggacac 96
             ||||||||||||||| ||||| |||||
Sbjct: 21924 gcagccggcggcggcgttcggtgacac 21950

>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 67     ggtgcagccggcggcggcc 85
              |||||||||||||||||||
Sbjct: 179617 ggtgcagccggcggcggcc 179599

>gb|AC005781.1|AC005781 Homo sapiens chromosome 19, cosmid R33632, complete sequence
          Length = 44052

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 48   tgctggggcagcctcagcaggtgcagc 74
            ||||||||||||||||| ||| |||||
Sbjct: 4637 tgctggggcagcctcagaaggagcagc 4611

>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      cggaagaacaggccggaca 41
               |||||||||||||||||||
Sbjct: 1956041 cggaagaacaggccggaca 1956023

>dbj|AB053475.1| Oryza sativa gene for RISBZ1, complete cds
          Length = 4442

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  ggtgcagccggcggcggcc 85
           |||||||||||||||||||
Sbjct: 262 ggtgcagccggcggcggcc 280

>dbj|AB053472.1| Oryza sativa mRNA for RISBZ1, complete cds
          Length = 1768

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  ggtgcagccggcggcggcc 85
           |||||||||||||||||||
Sbjct: 262 ggtgcagccggcggcggcc 280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 722,153
Number of Sequences: 3902068
Number of extensions: 722153
Number of successful extensions: 57820
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57281
Number of HSP's gapped (non-prelim): 539
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)