ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69a04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 383 bits (193), Expect = e-103 Identities = 273/300 (91%), Gaps = 6/300 (2%) Strand = Plus / Plus Query: 41 accagcaacagcgccgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcg 100 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 525 accagcaacagcgccgtcaacgtctccaccgggatcgtccacaccaccgtcggtaccgcg 584 Query: 101 ctgcgcgccaccaggccgctcgccgtctactccgtcgacaaggtgctgctgcccatggac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 ctgcgcgccaccaggccgctcgccgtctactccgtcgacaaggtgctgctgcccatggac 644 Query: 161 ctcttcggccccaagccgccggcgtccgcgccgctggccccgggaaagaagccctcctcc 220 ||||||||||||||||||||||| |||||||| | |||||| || ||||||||||| || Sbjct: 645 ctcttcggccccaagccgccggcctccgcgcccccggcccccggcaagaagccctcgtcg 704 Query: 221 gccaagggggcagccaaggcgccctcggggtcggacgaggacgaggacgacgagacaacc 280 |||||||||||||||||||| |||||||| ||| ||||||||||| ||| || Sbjct: 705 gccaagggggcagccaaggccccctcggg------cgacgacgaggacgaggaggaggcc 758 Query: 281 ccgcccgccggtgcggccgcagccgtcggcgccggatggaggagcctcgtcgccatggtg 340 ||||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 759 ccgcccgccggagccgccgcagccgtcggcgccggctggaggagcctcgtcgccgtggtg 818 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 414 tgagaccgacggatcgatggagactagctgcgtgc 448 |||||||||| |||||||||||||||||||||||| Sbjct: 885 tgagaccgacagatcgatggagactagctgcgtgc 919 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 361 gtgcctcttgtaagaagaagaaa 383 ||||||||||||||||||||||| Sbjct: 839 gtgcctcttgtaagaagaagaaa 861 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 16 gctaagctagccagcacctcgatcta 41 ||||||| |||||||||||||||||| Sbjct: 8 gctaagcaagccagcacctcgatcta 33
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 111 bits (56), Expect = 2e-21 Identities = 121/140 (86%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 56 gtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgcc-accag 114 |||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||| Sbjct: 57938 gtcaacgtctccaccggcgtcgtcgacaccacgctcggcaccgcgctgcgcgccgacca- 57996 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaa 174 |||||||||||| |||||||||||||||||||| || || | || ||||||||||| Sbjct: 57997 gccgctcgccgtttactccgtcgacaaggtgctcctcccgtacgcgctgttcggccccaa 58056 Query: 175 gccgccggcgtccgcgccgc 194 ||||||| ||||| |||||| Sbjct: 58057 gccgccgccgtccccgccgc 58076 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaagccg 178 |||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||| Sbjct: 62465 ctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccg 62524 Query: 179 ccggcgtccgcgccg 193 || || |||||||| Sbjct: 62525 cccacgcccgcgccg 62539
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 121/140 (86%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 56 gtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgcc-accag 114 |||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||| Sbjct: 27827521 gtcaacgtctccaccggcgtcgtcgacaccacgctcggcaccgcgctgcgcgccgacca- 27827579 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaa 174 |||||||||||| |||||||||||||||||||| || || | || ||||||||||| Sbjct: 27827580 gccgctcgccgtttactccgtcgacaaggtgctcctcccgtacgcgctgttcggccccaa 27827639 Query: 175 gccgccggcgtccgcgccgc 194 ||||||| ||||| |||||| Sbjct: 27827640 gccgccgccgtccccgccgc 27827659 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaagccg 178 |||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||| Sbjct: 27832048 ctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccg 27832107 Query: 179 ccggcgtccgcgccg 193 || || |||||||| Sbjct: 27832108 cccacgcccgcgccg 27832122 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gtcgacaaggtgctgctgcc 153 |||||||||||||||||||| Sbjct: 3655884 gtcgacaaggtgctgctgcc 3655865
>ref|NM_191933.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 55 cgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgccaccag 114 ||||||||||||||||||| |||| | ||||||| || |||||| |||| || Sbjct: 450 cgtcaacgtctccaccggcgtcgtcgaggtcaccgtcaccaacgcgctcagcgcggtcaa 509 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggc 169 ||||||||||||||||||||||||||||||||| || ||| | || ||||||||| Sbjct: 510 gccgctcgccgtctactccgtcgacaaggtgctcctccccttcgagctcttcggc 564
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 55 cgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgccaccag 114 ||||||||||||||||||| |||| | ||||||| || |||||| |||| || Sbjct: 27334706 cgtcaacgtctccaccggcgtcgtcgaggtcaccgtcaccaacgcgctcagcgcggtcaa 27334647 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggc 169 ||||||||||||||||||||||||||||||||| || ||| | || ||||||||| Sbjct: 27334646 gccgctcgccgtctactccgtcgacaaggtgctcctccccttcgagctcttcggc 27334592 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 63 tctccaccggcatcgtacacaccaccgtcggcaccgcgct 102 ||||||||||| |||| || |||||||||||| |||||| Sbjct: 3096900 tctccaccggcgtcgtcaacgccaccgtcggcaacgcgct 3096861
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 55 cgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgccaccag 114 ||||||||||||||||||| |||| | ||||||| || |||||| |||| || Sbjct: 17601 cgtcaacgtctccaccggcgtcgtcgaggtcaccgtcaccaacgcgctcagcgcggtcaa 17542 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggc 169 ||||||||||||||||||||||||||||||||| || ||| | || ||||||||| Sbjct: 17541 gccgctcgccgtctactccgtcgacaaggtgctcctccccttcgagctcttcggc 17487
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 55 cgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgccaccag 114 ||||||||||||||||||| |||| | ||||||| || |||||| |||| || Sbjct: 115223 cgtcaacgtctccaccggcgtcgtcgaggtcaccgtcaccaacgcgctcagcgcggtcaa 115164 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggc 169 ||||||||||||||||||||||||||||||||| || ||| | || ||||||||| Sbjct: 115163 gccgctcgccgtctactccgtcgacaaggtgctcctccccttcgagctcttcggc 115109
>dbj|AK105603.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A09, full insert sequence Length = 1040 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 55 cgtcaacgtctccaccggcatcgtacacaccaccgtcggcaccgcgctgcgcgccaccag 114 ||||||||||||||||||| |||| | ||||||| || |||||| |||| || Sbjct: 503 cgtcaacgtctccaccggcgtcgtcgaggtcaccgtcaccaacgcgctcagcgcggtcaa 562 Query: 115 gccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggc 169 ||||||||||||||||||||||||||||||||| || ||| | || ||||||||| Sbjct: 563 gccgctcgccgtctactccgtcgacaaggtgctcctccccttcgagctcttcggc 617
>dbj|AK099313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144L21, full insert sequence Length = 1147 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaagccg 178 |||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||| Sbjct: 611 ctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccg 670 Query: 179 ccggcgtccgcgccg 193 || || |||||||| Sbjct: 671 cccacgcccgcgccg 685
>dbj|AK058836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C09, full insert sequence Length = 1102 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaagccg 178 |||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||| Sbjct: 617 ctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccg 676 Query: 179 ccggcgtccgcgccg 193 || || |||||||| Sbjct: 677 cccacgcccgcgccg 691
>gb|AY107515.1| Zea mays PCO145505 mRNA sequence Length = 883 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcgg 168 ||||||||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 609 ctcgccgtctactccgtcgacaaggtgctcctgcccctggagctgttcgg 658
>gb|BT016499.1| Zea mays clone Contig332 mRNA sequence Length = 1156 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 119 ctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcgg 168 ||||||| ||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 619 ctcgccgactactccgtcgacaaggtgctcctgcccctggagctgttcgg 668
>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA sequence Length = 954 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 106 cgccaccaggccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctctt 165 |||||||| ||| |||||||||||||| || |||||||||| ||||||||| | ||||| Sbjct: 571 cgccaccaagcccatcgccgtctactccatcaacaaggtgctcctgcccatgcagctctt 630 Query: 166 c 166 | Sbjct: 631 c 631
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 250 gtcggacgaggacgaggacgacgag 274 ||||||||||||||||||||||||| Sbjct: 402 gtcggacgaggacgaggacgacgag 426
>gb|BT016396.1| Zea mays clone Contig229 mRNA sequence Length = 1341 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctcttcggccccaag 175 ||||||||| ||||| ||||||||||||||| ||| ||| || || ||||| |||||| Sbjct: 647 ccgctcgccatctaccccgtcgacaaggtgccgctcccctacgagctgttcgggcccaag 706 Query: 176 ccgcc 180 ||||| Sbjct: 707 ccgcc 711
>gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis, full insert mRNA sequence Length = 1013 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 115 gccgctcgccgtctactccgtcgacaaggtgct 147 |||||||||||||||||| ||||||||||||| Sbjct: 579 gccgctcgccgtctactcgctcgacaaggtgct 611
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 250 gtcggacgaggacgaggacgacgag 274 ||||||||||||||||||||||||| Sbjct: 2962294 gtcggacgaggacgaggacgacgag 2962270 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 23863053 ggacgaggacgaggacgacga 23863033 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 1143725 cggacgaggacgaggacgac 1143706
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 250 gtcggacgaggacgaggacgacgag 274 ||||||||||||||||||||||||| Sbjct: 135356 gtcggacgaggacgaggacgacgag 135332
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 250 gtcggacgaggacgaggacgacgag 274 ||||||||||||||||||||||||| Sbjct: 13017 gtcggacgaggacgaggacgacgag 12993
>gb|AY108316.1| Zea mays PCO143640 mRNA sequence Length = 474 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 106 cgccaccaggccgctcgccgtctactccgtcgacaaggtgctgctgcccatggacctctt 165 |||||||||||| ||||||||||| | || |||||||||| ||||||||| | ||||| Sbjct: 192 cgccaccaggcccgtcgccgtctacgcgctcaacaaggtgctcctgcccatgcagctctt 251 Query: 166 c 166 | Sbjct: 252 c 252
>ref|XM_507473.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.17 mRNA Length = 1028 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 605 ccgctcgccgtctactccgtcgac 628
>ref|XM_507472.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.17 mRNA Length = 1032 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 605 ccgctcgccgtctactccgtcgac 628
>ref|XM_507471.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.17 mRNA Length = 1039 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 599 ccgctcgccgtctactccgtcgac 622
>ref|XM_506785.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.17 mRNA Length = 1043 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 603 ccgctcgccgtctactccgtcgac 626
>ref|XM_465175.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 533 ccgctcgccgtctactccgtcgac 556
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 12113458 ccgctcgccgtctactccgtcgac 12113435 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 35286365 ggacgaggacgaggacgacg 35286384 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 6450232 gacgaggacgaggacgacga 6450251
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 61763 ccgctcgccgtctactccgtcgac 61740
>dbj|AK104655.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C06, full insert sequence Length = 1043 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 603 ccgctcgccgtctactccgtcgac 626
>dbj|AK104630.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C03, full insert sequence Length = 1039 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 599 ccgctcgccgtctactccgtcgac 622
>dbj|AK104181.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B07, full insert sequence Length = 1028 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 605 ccgctcgccgtctactccgtcgac 628
>dbj|AK061421.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F07, full insert sequence Length = 988 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 533 ccgctcgccgtctactccgtcgac 556
>dbj|AK061195.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-H01, full insert sequence Length = 1032 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccgctcgccgtctactccgtcgac 139 |||||||||||||||||||||||| Sbjct: 605 ccgctcgccgtctactccgtcgac 628
>gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb23) gene, partial cds Length = 2028 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgaga 275 ||||||||||||||||||||||| Sbjct: 907 ggacgaggacgaggacgacgaga 929
>emb|Y14276.1|SCSIG1 Sorghum bicolor mRNA for plastid RNA polymerase sigma factor Length = 1886 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgaga 275 ||||||||||||||||||||||| Sbjct: 623 ggacgaggacgaggacgacgaga 645
>ref|NM_123530.1| Arabidopsis thaliana unknown protein AT5G41660 mRNA, complete cds Length = 633 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 gcgccgtcaacgtctccaccgg 72 |||||||||||||||||||||| Sbjct: 439 gcgccgtcaacgtctccaccgg 418
>gb|AY800649.1| Arabidopsis thaliana clone H0000001212 hypothetical protein (AT5G41660) mRNA, complete cds Length = 1698 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 gcgccgtcaacgtctccaccgg 72 |||||||||||||||||||||| Sbjct: 747 gcgccgtcaacgtctccaccgg 726
>gb|BT018218.1| Zea mays clone EL01N0561B10.c mRNA sequence Length = 670 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 358 ggacgaggacgaggacgacgag 337
>ref|XM_362225.1| Magnaporthe grisea 70-15 predicted protein (MG04670.4) partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 246 ggacgaggacgaggacgacgag 267
>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence Length = 130492 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 21325 ggacgaggacgaggacgacgag 21346
>ref|XM_861216.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 8 (LOC484478), mRNA Length = 1817 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1637 ggacgaggacgaggacgacgag 1616
>ref|XM_861199.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 7 (LOC484478), mRNA Length = 1736 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1520 ggacgaggacgaggacgacgag 1499
>ref|XM_861184.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 6 (LOC484478), mRNA Length = 1695 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1604 ggacgaggacgaggacgacgag 1583
>ref|XM_861169.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 5 (LOC484478), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1661 ggacgaggacgaggacgacgag 1640
>ref|XM_861153.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 4 (LOC484478), mRNA Length = 1719 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1628 ggacgaggacgaggacgacgag 1607
>ref|XM_861140.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 3 (LOC484478), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1622 ggacgaggacgaggacgacgag 1601
>ref|XM_847636.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 2 (LOC484478), mRNA Length = 1932 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1685 ggacgaggacgaggacgacgag 1664
>ref|XM_541592.2| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 1 (LOC484478), mRNA Length = 2285 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 2175 ggacgaggacgaggacgacgag 2154
>emb|X56537.1|HSF9HMEO Human novel homeobox mRNA for a DNA binding protein Length = 1254 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 584 ggacgaggacgaggacgacgag 605
>gb|U07664.1|HSHB9HB2 Homo sapiens HB9 homeobox gene, exons 2 and 3 and complete cds Length = 3484 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 2184 ggacgaggacgaggacgacgag 2205
>emb|CR623223.1| full-length cDNA clone CL0BB009ZA03 of Neuroblastoma of Homo sapiens (human) Length = 2029 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1248 ggacgaggacgaggacgacgag 1269
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ccgccggtgcggccgcagccgt 306 |||||||||||||||||||||| Sbjct: 1323192 ccgccggtgcggccgcagccgt 1323213
>ref|NM_005515.3| Homo sapiens homeobox HB9 (HLXB9), mRNA Length = 2176 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1377 ggacgaggacgaggacgacgag 1398
>dbj|AK169543.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089N23 product:sperm specific antigen 2, full insert sequence Length = 5270 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 257 ggacgaggacgaggacgacgag 278
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 605883 ggacgaggacgaggacgacgag 605904 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 123179 gacgaggacgaggacgacgag 123199
>gb|AF107457.1|AF107457 Homo sapiens clone HB9 mRNA sequence Length = 2061 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1261 ggacgaggacgaggacgacgag 1282
>gb|AC147215.4| Pan troglodytes BAC clone RP43-141N5 from chromosome 7, complete sequence Length = 179309 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 36015 ggacgaggacgaggacgacgag 35994
>ref|XM_230036.3| PREDICTED: Rattus norvegicus sperm specific antigen 2 (predicted) (Ssfa2_predicted), mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1047 ggacgaggacgaggacgacgag 1068
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 gcgccgtcaacgtctccaccgg 72 |||||||||||||||||||||| Sbjct: 52409 gcgccgtcaacgtctccaccgg 52388
>gb|AY924848.1| Arabidopsis thaliana hypothetical protein (At5g41660) gene, complete cds Length = 633 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 gcgccgtcaacgtctccaccgg 72 |||||||||||||||||||||| Sbjct: 439 gcgccgtcaacgtctccaccgg 418
>dbj|AB120565.1| Mus musculus mRNA for KRAP, complete cds Length = 3759 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 141 ggacgaggacgaggacgacgag 162
>ref|NM_211672.1| Eremothecium gossypii AGL056Wp (AGL056W), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 660 ggacgaggacgaggacgacgag 681
>gb|AF107453.1|HSHB9G2 Homo sapiens homeotic protein HB9 gene, exons 2 and 3 and partial cds Length = 1979 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 1068 ggacgaggacgaggacgacgag 1089
>dbj|AB093303.1| Mus musculus mRNA for mKIAA1927 protein Length = 4966 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 131 ggacgaggacgaggacgacgag 152
>ref|NM_080558.3| Mus musculus sperm specific antigen 2 (Ssfa2), mRNA Length = 3759 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 141 ggacgaggacgaggacgacgag 162
>emb|AL928770.1| Mouse DNA sequence from clone RP23-20E18 on chromosome 2, complete sequence Length = 87095 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgag 274 |||||||||||||||||||||| Sbjct: 84199 ggacgaggacgaggacgacgag 84220
>ref|XM_525340.1| PREDICTED: Pan troglodytes LOC469956 (LOC469956), mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 769 gacgaggacgaggacgacgag 789
>ref|XM_483012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 688 ggacgaggacgaggacgacga 708
>ref|NM_152897.1| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 2, mRNA Length = 1921 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 303 gacgaggacgaggacgacgag 323
>ref|NM_033421.2| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 1, mRNA Length = 3173 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 303 gacgaggacgaggacgacgag 323
>ref|XM_430347.1| PREDICTED: Gallus gallus hypothetical gene supported by BX931485 (LOC425988), partial mRNA Length = 539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 453 ggacgaggacgaggacgacga 473
>ref|XM_365395.1| Magnaporthe grisea 70-15 hypothetical protein (MG02097.4) partial mRNA Length = 2472 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 2220 ggacgaggacgaggacgacga 2240
>ref|XM_954367.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 249 ggacgaggacgaggacgacga 269
>ref|XM_325756.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 249 ggacgaggacgaggacgacga 269
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 63084 gacgaggacgaggacgacgag 63064
>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome Length = 150224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 145144 ggacgaggacgaggacgacga 145124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 118016 ggacgaggacgaggacgacga 118036
>gb|AY268055.1| Lontra canadensis clone otter b8 microsatellite RIO 05 sequence Length = 428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 335 ggacgaggacgaggacgacga 355
>ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, shaker-related subfamily, member 4 (LOC485427), mRNA Length = 2001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 412 gacgaggacgaggacgacgag 432
>ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM06312.1) partial mRNA Length = 3435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 1563 ggacgaggacgaggacgacga 1583
>gb|BC012904.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone IMAGE:3864564), containing frame-shift errors Length = 1868 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 303 gacgaggacgaggacgacgag 323
>emb|AL008726.3|HS337O18 Human DNA sequence from clone RP3-337O18 on chromosome 20q12-13.1 Contains the PLPT gene for phospholipid transfer protein, the PPGB gene for protective protein for beta-galactosidase (galactosialidosis), the PTE1 gene for peroxisomal acyl-CoA thioesterase, the C20orf161 gene, the C20orf162 gene, the C20orf163, the C20orf164 gene, the C20orf165 gene, the 5' end of an variant of the TNNC2 gene for fast troponin C2 and three CpG islands, complete sequence Length = 86080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 6789 gacgaggacgaggacgacgag 6809
>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome Length = 149430 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 144594 ggacgaggacgaggacgacga 144574 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 117723 ggacgaggacgaggacgacga 117743
>ref|XM_781851.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31439-PA (LOC581873), mRNA Length = 11769 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 11110 ggacgaggacgaggacgacga 11090
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 251274 ggacgaggacgaggacgacga 251254
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 cggggtcggacgaggacgaggacgacgag 274 ||||| |||||||||||||||| |||||| Sbjct: 3935 cgggggcggacgaggacgaggaggacgag 3907
>dbj|AK095851.1| Homo sapiens cDNA FLJ38532 fis, clone HCHON2001099 Length = 3044 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 184 gacgaggacgaggacgacgag 204
>emb|CR617424.1| full-length cDNA clone CS0DI036YC23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 187 gacgaggacgaggacgacgag 207
>emb|CR601928.1| full-length cDNA clone CS0DB001YB03 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1550 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 251 gacgaggacgaggacgacgag 271
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 130325 ggacgaggacgaggacgacga 130345
>gb|AC175201.2| Sporobolomyces roseus clone JGIBAIF-33D23, complete sequence Length = 42507 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 14012 gacgaggacgaggacgacgag 14032
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 2561578 ggacgaggacgaggacgacga 2561598
>gb|AF395845.1|AF395845 Homo sapiens SNX21 (SNX21) mRNA, complete cds Length = 1122 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 214 gacgaggacgaggacgacgag 234
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 3430619 gacgaggacgaggacgacgag 3430639
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 24194383 gacgaggacgaggacgacgag 24194363
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 21305612 gacgaggacgaggacgacgag 21305592
>ref|NM_001011629.1| Apis mellifera putative transcription factor mblk-1 (Mblk-1), mRNA Length = 14440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 68 ggacgaggacgaggacgacga 88
>dbj|AB182650.1| Equid herpesvirus 1 ICP4 gene for IE, complete cds Length = 5434 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 4859 ggacgaggacgaggacgacga 4879
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 36175 ggacgaggacgaggacgacga 36155
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 5072556 gacgaggacgaggacgacgag 5072576 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 4160860 ggacgaggacgaggacgacg 4160841
>gb|AF523834.1| Homo sapiens sorting nexin protein family member 21 mRNA, complete cds Length = 1600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 282 gacgaggacgaggacgacgag 302
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 54757 ggacgaggacgaggacgacga 54737
>dbj|AB158520.1| Equine herpesvirus 1 ORF64 gene for transcriptional activator, complete cds Length = 4461 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 576 ggacgaggacgaggacgacga 556
>dbj|AK099821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A13, full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 688 ggacgaggacgaggacgacga 708
>ref|NM_211422.1| Eremothecium gossypii AGL307Wp (AGL307W), mRNA Length = 972 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 244 gacgaggacgaggacgacgag 264
>emb|AL591562.1|HS337O184 Novel human gene mapping to chomosome 20 Length = 1600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 282 gacgaggacgaggacgacgag 302
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ccgggaaagaagccctcctccgcca 224 ||||||||||||||| ||||||||| Sbjct: 226158 ccgggaaagaagcccgcctccgcca 226182
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 21615811 gacgaggacgaggacgacgag 21615791
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 24122589 gacgaggacgaggacgacgag 24122569
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 79074 gacgaggacgaggacgacgag 79054
>gb|BC019823.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone MGC:29895 IMAGE:4453502), complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacgag 274 ||||||||||||||||||||| Sbjct: 276 gacgaggacgaggacgacgag 296
>gb|AY740083.1| Ostreococcus tauri ZTL/AFR-like protein gene, complete cds Length = 1452 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 401 ggacgaggacgaggacgacga 421
>gb|J04366.1|HSEIEP Equine herpesvirus type 1 immediate-early protein gene, complete cds Length = 8174 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 1563 ggacgaggacgaggacgacga 1543
>dbj|AB047034.1| Apis mellifera mblk-1 mRNA, complete cds Length = 14440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacga 273 ||||||||||||||||||||| Sbjct: 68 ggacgaggacgaggacgacga 88
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 132104 gacgaggacgaggacgacga 132085
>ref|XM_550213.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 63 tctccaccggcatcgtacacaccaccgtcggcaccgcgct 102 ||||||||||| |||| || |||||||||||| |||||| Sbjct: 503 tctccaccggcgtcgtcaacgccaccgtcggcaacgcgct 542
>ref|XM_479831.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1613 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 1128 cggacgaggacgaggacgac 1109
>ref|XM_475645.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gtcgacaaggtgctgctgcc 153 |||||||||||||||||||| Sbjct: 550 gtcgacaaggtgctgctgcc 569
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 213 ggacgaggacgaggacgacg 232
>ref|XM_478901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 215 gacgaggacgaggacgacga 234
>gb|BT017762.1| Zea mays clone EL01N0501F08.c mRNA sequence Length = 1235 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 241 gacgaggacgaggacgacga 260
>gb|AY758272.1| Gallus gallus microsatellite NLRIC0003 sequence Length = 371 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 154 gacgaggacgaggacgacga 135
>gb|U51997.1| Caenorhabditis elegans cosmid F19G12, complete sequence Length = 28537 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 27546 aagaagaagaaaattcaagc 27527
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 caagccgccggcgtccgcgc 191 |||||||||||||||||||| Sbjct: 1874768 caagccgccggcgtccgcgc 1874787
>ref|XM_424102.1| PREDICTED: Gallus gallus similar to oxidative stress responsive 1 (LOC426458), mRNA Length = 1349 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 502 gacgaggacgaggacgacga 521
>ref|XM_868822.1| PREDICTED: Bos taurus hypothetical protein LOC616725 (LOC616725), mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcggacgaggacgaggacga 270 |||||||||||||||||||| Sbjct: 58 tcggacgaggacgaggacga 77
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcgacaaggtgctgctgccc 154 |||||||||||||||||||| Sbjct: 2997834 tcgacaaggtgctgctgccc 2997815
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcgacaaggtgctgctgccc 154 |||||||||||||||||||| Sbjct: 2819995 tcgacaaggtgctgctgccc 2819976
>gb|AY524544.1| Streptomyces chrysomallus ectoine biosynthesis gene cluster, complete sequence Length = 3366 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccggtgcggccgcagcc 304 |||||||||||||||||||| Sbjct: 1455 ccgccggtgcggccgcagcc 1436
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gtcgacaaggtgctgctgcc 153 |||||||||||||||||||| Sbjct: 78231 gtcgacaaggtgctgctgcc 78212
>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete sequence Length = 111332 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 10425 gacgaggacgaggacgacga 10406
>gb|AC006330.5| Homo sapiens BAC clone RP11-229D13 from 7, complete sequence Length = 96299 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gaagaagaaaattcaagctg 393 |||||||||||||||||||| Sbjct: 55566 gaagaagaaaattcaagctg 55547
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cagcaacagcgccgtcaacgtctccaccggca 74 |||||||| || |||||||||||||| ||||| Sbjct: 1632421 cagcaacatcgacgtcaacgtctccatcggca 1632452
>ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING finger and KH domain containing protein 1 (LOC612270), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 1448 gacgaggacgaggacgacga 1429
>ref|XM_542197.2| PREDICTED: Canis familiaris similar to Transcription factor E2-alpha (Immunoglobulin enhancer binding factor E12/E47) (Transcription factor-3) (TCF-3) (Immunoglobulin transcription factor-1) (Transcription factor ITF-1) (Kappa-E2-binding factor) (LOC485079), mRNA Length = 1899 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 1523 cggacgaggacgaggacgac 1542
>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete sequence Length = 202976 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 136178 gacgaggacgaggacgacga 136197
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 147702 gacgaggacgaggacgacga 147721 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 130531 gacgaggacgaggacgacga 130512
>ref|XM_388716.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08540.1) partial mRNA Length = 3402 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 cgccgtctactccgtcgacaaggt 144 ||||||||||||||| |||||||| Sbjct: 1078 cgccgtctactccgttgacaaggt 1055
>gb|BC107561.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:124855 IMAGE:7937018), complete cds Length = 3001 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 514 ggacgaagacgaggacgacgagac 537
>emb|AL132848.1|CEY47H10A Caenorhabditis elegans YAC Y47H10A, complete sequence Length = 31521 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 5109 aagaagaagaaaattcaagc 5090
>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8, complete sequence Length = 207282 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gaaagaagccctcctccgcc 223 |||||||||||||||||||| Sbjct: 102794 gaaagaagccctcctccgcc 102813
>ref|NM_001037202.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3001 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 514 ggacgaagacgaggacgacgagac 537
>emb|CR636876.2|CNS0EQDU Tetraodon nigroviridis full-length cDNA Length = 1630 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcggacgaggacgaggacga 270 |||||||||||||||||||| Sbjct: 6 tcggacgaggacgaggacga 25
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 47730 gacgaggacgaggacgacga 47711
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagccgccggcgtccgcgccgctg 196 |||||||||| ||||||||||||| Sbjct: 222940 aagccgccggtgtccgcgccgctg 222963
>emb|X81888.1|MPNARA2S M.persicae mRNA for nicotinic acetylcholine receptor alpha 2 subunit Length = 2339 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gtcggacgaggacgaggacg 269 |||||||||||||||||||| Sbjct: 1374 gtcggacgaggacgaggacg 1393
>emb|X15078.1|HCRPLCLU Halobium cutirubrum L11, L1, L10 and L12 equivalent ribosomal protein gene cluster Length = 5146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcgccgctggccccggga 205 |||||||||||||||||||| Sbjct: 4631 ccgcgccgctggccccggga 4650
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cggtgcggccgcagccgtcg 308 |||||||||||||||||||| Sbjct: 1729825 cggtgcggccgcagccgtcg 1729844
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 205737 gacgaggacgaggacgacga 205718
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 4635 gacgaggacgaggacgacga 4616
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene) Length = 4179 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acgaggacgaggacgacgag 274 |||||||||||||||||||| Sbjct: 520 acgaggacgaggacgacgag 501
>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 155615 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 138354 gacgaggacgaggacgacga 138373
>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 123884 gacgaggacgaggacgacga 123903
>gb|AE005722.1| Caulobacter crescentus CB15 section 48 of 359 of the complete genome Length = 12112 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gccgccggcgtccgcgccgc 194 |||||||||||||||||||| Sbjct: 1239 gccgccggcgtccgcgccgc 1258
>gb|AE011980.1| Xanthomonas axonopodis pv. citri str. 306, section 358 of 469 of the complete genome Length = 11507 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ccaccgtcggcaccgcgctgcgcg 107 ||||||||| |||||||||||||| Sbjct: 6340 ccaccgtcgccaccgcgctgcgcg 6363
>tpg|BK003497.1| TPA: TPA_inf: Drosophila melanogaster HDC02776 (HDC02776) gene, complete cds Length = 276 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 133 ggacgaggacgaggacgacg 114
>gb|AE012462.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 370 of 460 of the complete genome Length = 12484 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccgtcggcaccgcgctgc 104 |||||||||||||||||||| Sbjct: 11261 caccgtcggcaccgcgctgc 11280
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 135256 gacgaggacgaggacgacga 135237
>gb|AC113165.1| Homo sapiens chromosome 5 clone RP11-213E1, complete sequence Length = 140640 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aagaaaattcaagctgggag 397 |||||||||||||||||||| Sbjct: 6105 aagaaaattcaagctgggag 6124
>gb|AC104119.2| Homo sapiens chromosome 5 clone RP11-34D23, complete sequence Length = 168108 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 aagaaaattcaagctgggag 397 |||||||||||||||||||| Sbjct: 44547 aagaaaattcaagctgggag 44528
>gb|AF372498.1|AF372498 Glycine max GT-2 factor mRNA, partial cds Length = 1279 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 998 gacgaggacgaggacgacga 1017
>dbj|AK154510.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630041G20 product:hypothetical Core domain in kinesin and myosin motor/Pleckstrin-like/Band 4.1/PH domain profile/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/Pleckstrin-homology-related/FERM/Peptidase S1, chymotrypsin containing protein, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 531 ggacgaagacgaggacgacgagac 554
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 102934 gacgaggacgaggacgacga 102953
>dbj|AK164128.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530042D12 product:hypothetical Band 4.1/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/FERM containing protein, full insert sequence Length = 3016 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 531 ggacgaagacgaggacgacgagac 554
>gb|BC020025.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:27854 IMAGE:3490992), complete cds Length = 3020 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 515 ggacgaagacgaggacgacgagac 538
>ref|NM_146030.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3020 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 515 ggacgaagacgaggacgacgagac 538
>ref|XM_704687.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 2 (LOC553406), mRNA Length = 5737 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gaaagaagccctcctccgcc 223 |||||||||||||||||||| Sbjct: 3816 gaaagaagccctcctccgcc 3835
>ref|XM_704688.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 3 (LOC553406), mRNA Length = 5731 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gaaagaagccctcctccgcc 223 |||||||||||||||||||| Sbjct: 3810 gaaagaagccctcctccgcc 3829
>ref|XM_678828.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 1 (LOC553406), mRNA Length = 5848 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gaaagaagccctcctccgcc 223 |||||||||||||||||||| Sbjct: 3810 gaaagaagccctcctccgcc 3829
>gb|AC092400.1|AC092400 Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39L06, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 55029 ggacgaggacgaggacgacg 55048
>gb|AC092396.1|AC092396 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR21C10, complete sequence Length = 164439 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 23080 ggacgaggacgaggacgacg 23061
>gb|BC093434.1| Danio rerio hypothetical protein LOC553406, mRNA (cDNA clone IMAGE:7158173), partial cds Length = 1383 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gaaagaagccctcctccgcc 223 |||||||||||||||||||| Sbjct: 655 gaaagaagccctcctccgcc 674
>gb|AC006762.2| Caenorhabditis elegans cosmid Y42G9A, complete sequence Length = 30585 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 27403 aagaagaagaaaattcaagc 27384
>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA Length = 7938 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 1040 gacgaggacgaggacgacga 1021
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 23566323 gacgaggacgaggacgacga 23566342
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 19625646 ggacgaggacgaggacgacg 19625665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 11808141 gacgaggacgaggacgacga 11808122 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 4350195 gacgaggacgaggacgacga 4350176
>gb|L00036.1|HS1US Human herpesvirus strain 17 complete short unique region with partial terminal and inverted repeats DNA, complete cds Length = 26245 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 21686 gacgaggacgaggacgacga 21705 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 4560 gacgaggacgaggacgacga 4541
>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence Length = 193015 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tcttgtaagaagaagaaaat 385 |||||||||||||||||||| Sbjct: 73295 tcttgtaagaagaagaaaat 73314
>gb|AC008050.6|AC008050 Homo sapiens chromosome 14 clone RP11-141I24 map 14q24.3, complete sequence Length = 176975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cttgtaagaagaagaaaatt 386 |||||||||||||||||||| Sbjct: 90449 cttgtaagaagaagaaaatt 90430
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gaaaattcaagctgggagga 399 |||||||||||||||||||| Sbjct: 25812 gaaaattcaagctgggagga 25831
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 56962 cggacgaggacgaggacgac 56943
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 36699 ggacgaggacgaggacgacg 36718
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 41775 gacgaggacgaggacgacga 41756
>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0006M19 Length = 144073 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 76076 gacgaggacgaggacgacga 76057
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 63 tctccaccggcatcgtacacaccaccgtcggcaccgcgct 102 ||||||||||| |||| || |||||||||||| |||||| Sbjct: 40688 tctccaccggcgtcgtcaacgccaccgtcggcaacgcgct 40649
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 107378 ggacgaggacgaggacgacg 107397
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 10102 ggacgaggacgaggacgacg 10121
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 92225 gacgaggacgaggacgacga 92244
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 18764 gacgaggacgaggacgacga 18783
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 126716 gacgaggacgaggacgacga 126735
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 10845 gacgaggacgaggacgacga 10864
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 98415 ggacgaggacgaggacgacg 98434
>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome Length = 13759 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcgccgctggccccggga 205 |||||||||||||||||||| Sbjct: 13521 ccgcgccgctggccccggga 13502
>emb|X06461.1|HEHSV1G3 Herpes simplex virus type I immediate early (IE) gene 3 for transcriptional activator IE175 (= ICP 4) Length = 6633 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 2074 gacgaggacgaggacgacga 2093
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091F23 Length = 147699 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 10804 cggacgaggacgaggacgac 10785
>dbj|AK111473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F03, full insert sequence Length = 1613 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cggacgaggacgaggacgac 271 |||||||||||||||||||| Sbjct: 1128 cggacgaggacgaggacgac 1109
>ref|XM_311354.2| Anopheles gambiae str. PEST ENSANGP00000021373 (ENSANGG00000018884), mRNA Length = 4648 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acgaggacgaggacgacgag 274 |||||||||||||||||||| Sbjct: 491 acgaggacgaggacgacgag 472
>dbj|AK110100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H07, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 tcggacgaggacgaggacgacgag 274 |||||||| ||||||||||||||| Sbjct: 1696 tcggacgacgacgaggacgacgag 1719
>dbj|AK110013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-G12, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 910 gacgaggacgaggacgacga 929
>dbj|AK108308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F08, full insert sequence Length = 746 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 63 tctccaccggcatcgtacacaccaccgtcggcaccgcgct 102 ||||||||||| |||| || |||||||||||| |||||| Sbjct: 261 tctccaccggcgtcgtcaacgccaccgtcggcaacgcgct 300
>dbj|AK105598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A03, full insert sequence Length = 1114 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gtcgacaaggtgctgctgcc 153 |||||||||||||||||||| Sbjct: 613 gtcgacaaggtgctgctgcc 632
>emb|AJ326466.1|HSA326466 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AD14C Length = 615 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 172 gacgaggacgaggacgacga 191
>dbj|AK071674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L13, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 215 gacgaggacgaggacgacga 234
>gb|AC025715.3| Caenorhabditis elegans cosmid Y38F2AR, complete sequence Length = 97157 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 313 aagaagaagaaaattcaagc 332
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cgccgtctactccgtcgaca 140 |||||||||||||||||||| Sbjct: 2778947 cgccgtctactccgtcgaca 2778928
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 cccgccggtgcggccgcagccgtc 307 ||||||||| |||||||||||||| Sbjct: 974 cccgccggtccggccgcagccgtc 997
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacgaggacgaggacgacg 272 |||||||||||||||||||| Sbjct: 58841 ggacgaggacgaggacgacg 58822
>gb|U86868.1|CPU86868 Chipmunk parvovirus non-structural protein 1 (NS1) gene, complete cds, and capsid protein (VP1) gene, partial cds Length = 5097 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 1920 gacgaggacgaggacgacga 1939
>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete sequence Length = 175890 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 124650 gacgaggacgaggacgacga 124669
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 230769 gacgaggacgaggacgacga 230750
>emb|Z82260.1|CEC32H11 Caenorhabditis elegans Cosmid C32H11, complete sequence Length = 31654 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 15609 aagaagaagaaaattcaagc 15590
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgcgctgcgcgccaccaggc 116 |||||||||||||||||||| Sbjct: 2255787 cgcgctgcgcgccaccaggc 2255768
>gb|AY998877.1| Lates calcarifer clone Lca90 microsatellite sequence Length = 614 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 582 gacgaggacgaggacgacga 563
>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence Length = 180800 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gacgaggacgaggacgacga 273 |||||||||||||||||||| Sbjct: 22838 gacgaggacgaggacgacga 22857
>emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chromosome 4, complete sequence Length = 165700 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 aagaagaagaaaattcaagc 391 |||||||||||||||||||| Sbjct: 94521 aagaagaagaaaattcaagc 94502
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete sequence Length = 250353 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ggacgaggacgaggacgacgagac 276 |||||| ||||||||||||||||| Sbjct: 218738 ggacgaagacgaggacgacgagac 218761
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 63 tctccaccggcatcgtacacaccaccgtcggcaccgcgct 102 ||||||||||| |||| || |||||||||||| |||||| Sbjct: 64940 tctccaccggcgtcgtcaacgccaccgtcggcaacgcgct 64901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,048,922 Number of Sequences: 3902068 Number of extensions: 4048922 Number of successful extensions: 89489 Number of sequences better than 10.0: 215 Number of HSP's better than 10.0 without gapping: 223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86499 Number of HSP's gapped (non-prelim): 2981 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
