ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69a03 |
|---|---|
| Clone Library Name | barley_pub |
>XYNB_PRUPE (P83344) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152)| (Fragment) Length = 461 Score = 132 bits (331), Expect = 3e-31 Identities = 61/108 (56%), Positives = 83/108 (76%), Gaps = 1/108 (0%) Frame = +1 Query: 1 FDGDPRQLAFGSLGPKDVCTSSNRELARETARQGIVLLKNSG-ALPLSAKSIKSMAVIGP 177 FDG+P +G+LGP+DVCT ++++LA E ARQGIVLL+N G +LPLS + +++AVIGP Sbjct: 51 FDGEPSAHQYGNLGPRDVCTPAHQQLALEAARQGIVLLENRGRSLPLSTRRHRTVAVIGP 110 Query: 178 NANASFTMIGNYEGTPCKYTTPLQGLGAKVNTVYQPGCTNVGCSGNSL 321 N++ + TMIGNY G C YTTPLQG+G T++Q GCT+V C+GN L Sbjct: 111 NSDVTVTMIGNYAGVACGYTTPLQGIGRYTRTIHQAGCTDVHCNGNQL 158
>BGLS_AGRTU (P27034) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 818 Score = 55.1 bits (131), Expect = 4e-08 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +1 Query: 67 NRELARETARQGIVLLKNSGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYT-TP 243 +R L R+ +G VLLKN G LPL+ S +AVIGPNA ++ M G YT +P Sbjct: 299 DRALIRQLGAEGAVLLKNDGVLPLAKSSFDQIAVIGPNAASARVMGGGSARIAAHYTVSP 358 Query: 244 LQGLGAKVNTVYQPGCTNVGCSGNSL 321 L+G+ A ++ VGC+ N L Sbjct: 359 LEGIRAALSNANSLRHA-VGCNNNRL 383
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 39.7 bits (91), Expect = 0.002 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 17/89 (19%) Frame = +1 Query: 49 DVCTSSNRELARETARQGIVLLKNS-GALPLSAKSIKSMAVIGPNA-------------- 183 DV + NR +A +A +G+VLLKN LPL + +K ++++G A Sbjct: 395 DVRSDINRAVALRSAVEGVVLLKNEHETLPLGREKVKRISILGQAAGDDSKGTSCSLRGC 454 Query: 184 --NASFTMIGNYEGTPCKYTTPLQGLGAK 264 A T G+ GT + TP G+GA+ Sbjct: 455 GSGAIGTGYGSGAGTFSYFVTPADGIGAR 483
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 38.1 bits (87), Expect = 0.005 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 16/96 (16%) Frame = +1 Query: 28 FGSLGPKD---VCTSS----NRELARETARQGIVLLKNS-GALPLSAKSIKSMAVIGPNA 183 + LGPK+ V T++ +R+ ARE AR+ +VLLKN LPL K ++AV+GP A Sbjct: 363 YSHLGPKESDPVDTNAESRLHRKEAREVARESVVLLKNRLETLPL--KKSGTIAVVGPLA 420 Query: 184 NASFTMIGNYE--GTPCKYTTPLQGL------GAKV 267 ++ ++G++ G + T L G+ GAK+ Sbjct: 421 DSQRDVMGSWSAAGVANQSVTVLAGIQNAVGDGAKI 456
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 37.7 bits (86), Expect = 0.007 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 10/86 (11%) Frame = +1 Query: 28 FGSLGPKD---VCTSS----NRELARETARQGIVLLKNS-GALPLSAKSIKSMAVIGPNA 183 + LGPK+ V T++ +R+ ARE AR+ +VLLKN LPL K ++AV+GP A Sbjct: 363 YSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPL--KKSATIAVVGPLA 420 Query: 184 NASFTMIGNYE--GTPCKYTTPLQGL 255 ++ ++G++ G + T L G+ Sbjct: 421 DSKRDVMGSWSAAGVADQSVTVLTGI 446
>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 845 Score = 35.0 bits (79), Expect = 0.045 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 58 TSSNRELARETARQGIVLLKNSGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKY- 234 T +L RE A IVLLKN L++K + VIGPNA A + G Y Sbjct: 306 TKETSDLLREIAADSIVLLKNKNNY-LTSKERRQYHVIGPNAKAKTSSGGGSASMNSYYV 364 Query: 235 TTPLQGLGAKV 267 +P +G+ K+ Sbjct: 365 VSPYEGIVNKL 375
>ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 protein)| Length = 816 Score = 34.7 bits (78), Expect = 0.058 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = +3 Query: 78 GTRDGAPGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAPGPG 257 G+ PGH+A Q+Q++ + HQ H + Q+Q Q + L R + +P P Sbjct: 185 GSLSQTPGHKAEQQQQQQQQQQQQHQ-HQQQQQQQQQQQQQQQHLSRAPGLITPGSPPPA 243 Query: 258 RQGQH 272 +Q Q+ Sbjct: 244 QQNQY 248
>MOBL_THIFE (P20085) Mobilization protein mobL| Length = 378 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = +3 Query: 117 EQRRAAALGKVHQVHGRHWAQRQCQLHH-----DRQLRRHTVQVHDAAPGPGRQ 263 EQR+A A+G + R+ LH DR+L +H Q H+ P GR+ Sbjct: 96 EQRKALAVGYARALADRYGVAADVALHAPRTVTDRELEKHPDQYHETDPKTGRR 149
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 32.3 bits (72), Expect = 0.29 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 11/86 (12%) Frame = +1 Query: 64 SNRELARETARQGIVLLKN-SGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYTT 240 ++ LAR+ A + +VLLKN LPL K ++A+IG +F Y+G+ + T Sbjct: 303 AHHRLARQAAAESMVLLKNEDDVLPL--KKSGTIALIG-----AFVKKPRYQGSGSSHIT 355 Query: 241 P---------LQGLGA-KVNTVYQPG 288 P ++ GA KVN VY G Sbjct: 356 PTRLDDIYEEIKKAGADKVNLVYSEG 381
>ZN291_HUMAN (Q9BY12) Zinc finger protein 291| Length = 1399 Score = 32.0 bits (71), Expect = 0.38 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +3 Query: 84 RDGAPGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQV 233 R+ A RA + R AAL Q Q++ QL HD +RRH Q+ Sbjct: 712 REDAARERARDREERLAALTAAQQ-EAMEELQKKIQLKHDESIRRHMEQI 760
>BGL1_ASPAC (P48825) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 860 Score = 31.6 bits (70), Expect = 0.49 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 Query: 64 SNRELARETARQGIVLLKNSGALPLSAKSIKSMAVIGPNANAS 192 ++ E+ R+ VLLKN+ ALPL+ K + +A++G +A ++ Sbjct: 387 NHSEVIRKLGADSTVLLKNNNALPLTGKE-RKVAILGEDAGSN 428
>SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-) (hSIRT1)| (hSIR2) (SIR2-like protein 1) Length = 747 Score = 30.8 bits (68), Expect = 0.84 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Frame = +3 Query: 69 PGAGTRDGAPGHRAPQEQRRAAALGKVHQVHGRHW--AQRQCQLHHDRQLRRHTVQVHDA 242 PG G PG AP+ + AAA G W A+ + Q + T + Sbjct: 42 PGLERSPGEPGGAAPEREVPAAARGCPGAAAAALWREAEAEAAAAGGEQEAQATAAAGEG 101 Query: 243 APGPGRQGQHRVP 281 GPG QG R P Sbjct: 102 DNGPGLQGPSREP 114
>UREE_RALSO (Q8XXT2) Urease accessory protein ureE| Length = 211 Score = 30.8 bits (68), Expect = 0.84 Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 2/73 (2%) Frame = +3 Query: 63 FQPGAGTRDGAP--GHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVH 236 F+P AG G GH A E+ AAA + HG H R C H H Sbjct: 138 FEPEAGAYGGGHRHGHDATFEEDYAAAQALYREHHG-HSHDRGCDHSHSHSHDHDHDHGH 196 Query: 237 DAAPGPGRQGQHR 275 PG G HR Sbjct: 197 VHGPGCGHAPHHR 209
>GAG_SFV1 (Q00071) Gag polyprotein (Core polyprotein)| Length = 647 Score = 30.0 bits (66), Expect = 1.4 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Frame = +3 Query: 72 GAGTRDGAPGHR----APQEQRRAAALGKVHQVH-GRHWAQRQCQLHHDR---QLRRHTV 227 G ++ G PG + AP + RR++ + Q G QRQ Q ++R LR T Sbjct: 486 GRRSQQGTPGRQSSGQAPPQGRRSSQGQQPRQSESGDQNNQRQLQGGNNRGGYNLRPRTY 545 Query: 228 QVHDAAPGPGRQGQHRVPAGVHQRRVQREQPTAQ 329 Q G GR+ + +Q+R Q +QP ++ Sbjct: 546 QPQRYGGGRGRRWNDQTARADNQQRSQSQQPQSE 579
>FXL18_HUMAN (Q96ME1) F-box/LRR-repeat protein 18 (F-box and leucine-rich repeat| protein 18) Length = 805 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +3 Query: 162 GRHWAQRQCQLHHDRQLRRHTVQVHDAAP----GPGRQGQHRVPAG 287 GRH Q +L H R L V D+AP P + H VP G Sbjct: 402 GRHLCQLLARLRHLRSLSLPVCSVADSAPRADRAPAQPAMHAVPRG 447
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 26/89 (29%) Frame = +3 Query: 96 PGHRAPQE-------------QRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVH 236 P HRAP E + A+ + VH RH + Q+H ++R + Sbjct: 431 PRHRAPLEGPLKQSTFTLPLSNQLASVNPSLVNVHIRHPPEASVQIHQVARVRGEAEEAP 490 Query: 237 D-------------AAPGPGRQGQHRVPA 284 + A PGPGR +R+PA Sbjct: 491 EENSVETRPSPRLPAGPGPGRWDSNRIPA 519
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -2 Query: 319 GCSRCTRR---WCTPAGTRC*PWRPGPGAASCTCTVC 218 GCSR +R W +P G+RC P P A S C Sbjct: 99 GCSRSSRSCSCWRSPCGSRCAPPAPRATATSAVTASC 135
>MMP2_HUMAN (P08253) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72| kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) (TBE-1) Length = 660 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +1 Query: 187 ASFTMIGNYEGTPCKYTTPLQG 252 A FTM GN EG PCK+ QG Sbjct: 278 ALFTMGGNAEGQPCKFPFRFQG 299
>HUTI_PSEPU (O31200) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 401 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/53 (43%), Positives = 27/53 (50%) Frame = -3 Query: 165 GHGLDGLCRERQRAAVLEEHDALARRLACQLPVGRRAHVLGAEAAEGELPGVA 7 G+GLD L ER+ V ARRLA +LP+ RA L A A E G A Sbjct: 137 GYGLD-LANERKMLRV-------ARRLADELPLAVRATCLAAHALPPEYAGRA 181
>DNAE2_MYCPA (Q73U92) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1093 Score = 29.3 bits (64), Expect = 2.4 Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 14/92 (15%) Frame = -1 Query: 263 LAPRPWSGVVYLHGVPS*LPIMVKLALALGPMTAMDLMDFAESGSAPL---FLRS----- 108 LAPR GVV G P +LA+A+G + A + +D A APL LRS Sbjct: 246 LAPRFGVGVVATTGAHFAGPSRRRLAMAMGAIRARESLDSAAGWLAPLGGSHLRSGAEMA 305 Query: 107 -TMPWR--AVSRASSRLEDVHTSL---GPRLP 30 WR AV+ A+ E L PRLP Sbjct: 306 RLFAWRPQAVTAAAELGEQCAFGLALIAPRLP 337
>CLC14_MOUSE (Q8VCP9) C-type lectin domain family 14 member A precursor| Length = 459 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 123 RRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAPGPG 257 R+ AAL V W + +C L D L ++ +V AP PG Sbjct: 141 RKCAALQATRGVEPAGWKEMRCHLRTDGYLCKYQFEVLCPAPRPG 185
>FUT4_RAT (Q62994) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 433 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +3 Query: 168 HWAQRQCQLHHDRQLRRH-TVQVHDAAPGPGR 260 HW +RQ ++ + QLRRH +V V A GPG+ Sbjct: 266 HWNERQARVRYYHQLRRHVSVDVFGRA-GPGQ 296
>MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)| (Endo-(1,4)-beta-mannanase) Length = 1021 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1 Query: 320 RLFPLHPTLVHPGWYTVLTLAPRPWSGVVYLH-GVPS*LPIMVKLALALG 174 R + LH T V P L + P P +G +++ G+P P++V++ LG Sbjct: 924 RSYVLHATTVQPAGDLALAVYPNPGAGRLHVEVGLPVAAPVVVEVFNLLG 973
>FAS2_PENPA (P15368) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:| Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synth Length = 1857 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = -3 Query: 204 DHGEAGIGVGPNDGHGLDGLCRERQRAAVLEEHDALARRLACQLPVGRRAHVLGAE 37 D G AG G+ D +D L ++ QRA ++ + +AR L L G +AHV+ E Sbjct: 304 DSGGAGGGM-VMDPAAIDALTKD-QRALFKQQLEIIARYLKMDLRGGEKAHVISQE 357
>XPC_DROME (Q24595) DNA-repair protein complementing XP-C cells homolog| (Xeroderma pigmentosum group C-complementing protein homolog) (XPCDM) (Mutagen-sensitive 209 protein) Length = 1293 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +3 Query: 255 GRQGQHRVPAGVHQRRVQREQPTAQ 329 G++G H+ P+G+ V++ +PT Q Sbjct: 60 GKRGDHKAPSGIKGSSVKKRKPTGQ 84
>VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)| (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase) Length = 757 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/49 (26%), Positives = 25/49 (51%) Frame = -1 Query: 164 AMDLMDFAESGSAPLFLRSTMPWRAVSRASSRLEDVHTSLGPRLPKASC 18 ++ + + S+PLF + P + V+R RL+++ + P ASC Sbjct: 295 SIGMFPYVMLASSPLFCSAEWPRKLVARCPKRLQELLPTKAAPRPSASC 343
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/87 (27%), Positives = 32/87 (36%) Frame = +3 Query: 69 PGAGTRDGAPGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAP 248 PG G P HRA + A A G H G A R C + T Q+ Sbjct: 10 PGCAATRGGPEHRAAWGEAEARANGHPHAAGG---ATRGCSKKPGGAV---TPQLQQQQQ 63 Query: 249 GPGRQGQHRVPAGVHQRRVQREQPTAQ 329 + QH Q+ VQ++Q A+ Sbjct: 64 QQQHEQQHEQQQHEQQQHVQQQQRLAK 90
>HUTI_PSEPK (Q88CZ9) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 401 Score = 28.5 bits (62), Expect = 4.2 Identities = 23/53 (43%), Positives = 27/53 (50%) Frame = -3 Query: 165 GHGLDGLCRERQRAAVLEEHDALARRLACQLPVGRRAHVLGAEAAEGELPGVA 7 G+GLD L ER+ V ARRLA +LP+ RA L A A E G A Sbjct: 137 GYGLD-LANERKMLRV-------ARRLADELPLTVRATCLAAHALPPEYAGRA 181
>CLC14_HUMAN (Q86T13) C-type lectin domain family 14 member A precursor| (Epidermal growth factor receptor 5) (EGFR-5) Length = 490 Score = 28.5 bits (62), Expect = 4.2 Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Frame = +3 Query: 69 PGAGTRDGAPGHRAPQEQ---RRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHD 239 PG D PQ RR A L V W + +C L + L ++ +V Sbjct: 120 PGGLESDTLQWVEEPQRSCTARRCAVLQATGGVEPAGWKEMRCHLRANGYLCKYQFEVLC 179 Query: 240 AAPGPGRQG--QHRVPAGVHQRRVQREQP 320 AP PG +R P +H + P Sbjct: 180 PAPRPGAASNLSYRAPFQLHSAALDFSPP 208
>ZN169_HUMAN (Q14929) Zinc finger protein 169| Length = 590 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Frame = +3 Query: 150 HQVH------GRHWAQRQCQLHHDRQLRRHTVQVHDAAPGPGRQGQHRVPAGVHQRRVQR 311 HQ H GR + QR + H R HT + P GR+ + +HQR+ Sbjct: 217 HQKHHVCPECGRGFCQRSDLIKHQRT---HTGEKPYLCPECGRRFSQKASLSIHQRKHSG 273 Query: 312 EQP 320 E+P Sbjct: 274 EKP 276
>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)| (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase) Length = 758 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/49 (26%), Positives = 25/49 (51%) Frame = -1 Query: 164 AMDLMDFAESGSAPLFLRSTMPWRAVSRASSRLEDVHTSLGPRLPKASC 18 ++ + + S+PLF + P + V+R RL+++ + P ASC Sbjct: 295 SIGMFPYVMLASSPLFCSAEWPRKLVARCPKRLQELLPAKAAPRPSASC 343
>GLNQ_ECOLI (P10346) Glutamine transport ATP-binding protein glnQ| Length = 240 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -3 Query: 135 RQRAAVLEEHDALARRLACQLPVGRRAHVLGAEAAEGELPGVAV 4 R R A EE + LAR L ++ + RAH +E + G+ VA+ Sbjct: 104 RVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAI 147
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = +3 Query: 105 RAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAPGPGRQGQHRVPA 284 R Q+ RR L + Q+ +R+ QL ++QLRR + + + R+ Sbjct: 409 RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKR 468 Query: 285 GVHQRR--VQREQPTAQY 332 +RR ++RE+ T ++ Sbjct: 469 EQEERRDWLKREEETERH 486
>DB109_PANTR (Q30KL7) Beta-defensin 109 precursor (Defensin, beta 109)| Length = 87 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -3 Query: 183 GVGPNDGH--GLDGLCRERQRAAVLEEHDALARRLAC 79 G+GP +GH L G+CR V ++ A RR+ C Sbjct: 23 GLGPAEGHCLNLSGVCRRDVCKVVEDQIGACRRRMKC 59
>YBK4_YEAST (P38164) WD-repeat protein YBL104C| Length = 1038 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/39 (28%), Positives = 24/39 (61%) Frame = -1 Query: 191 LALALGPMTAMDLMDFAESGSAPLFLRSTMPWRAVSRAS 75 L L PM ++++D +++ ++R+T W A+++AS Sbjct: 517 LGYGLDPMNTVEMIDSSKNLQNNAYIRNTWRWIAIAKAS 555
>MMP2_RAT (P33436) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72| kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) Length = 662 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 187 ASFTMIGNYEGTPCKYTTPLQG 252 A FTM GN +G PCK+ QG Sbjct: 278 ALFTMGGNADGQPCKFPFRFQG 299
>MMP2_RABIT (P50757) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72| kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) Length = 662 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 187 ASFTMIGNYEGTPCKYTTPLQG 252 A FTM GN +G PCK+ QG Sbjct: 278 ALFTMGGNADGQPCKFPFRFQG 299
>MMP2_MOUSE (P33434) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72| kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) Length = 662 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 187 ASFTMIGNYEGTPCKYTTPLQG 252 A FTM GN +G PCK+ QG Sbjct: 278 ALFTMGGNADGQPCKFPFRFQG 299
>RREB1_HUMAN (Q92766) RAS-responsive element-binding protein 1 (RREB-1)| (Raf-responsive zinc finger protein LZ321) Length = 755 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Frame = +3 Query: 57 HVFQPGAGTRDGAPGHRAPQEQRRA-----------AALGKVHQVHGR 167 H Q G G R G PG A QEQ+ A L + + HGR Sbjct: 438 HGLQAGGGRRRGRPGGAASQEQKLACDTCGKSFKFLGTLSRHRKAHGR 485
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Frame = +3 Query: 72 GAGTRDGAPGHRAPQEQRRAAALGKVHQVHGR-----HWAQRQCQLHHDRQLRRHTVQVH 236 G R G+ ++ ++ +A G+ GR H R H Q + T++ H Sbjct: 1109 GRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAH 1168 Query: 237 DAAPGPGRQGQHRVPAGVHQRRVQR 311 + GRQG H H++ V R Sbjct: 1169 PGSRRGGRQGSH------HEQSVDR 1187
>ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC 2.3.1.94) (ORF| 3) (6-deoxyerythronolide B synthase III) (DEBS 3) Length = 3171 Score = 28.1 bits (61), Expect = 5.5 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 17/94 (18%) Frame = -3 Query: 261 GAQALERRRVLARCAFVVADHGEAGIGVGPNDGHGL-------------DGLCRERQRAA 121 G +A++ R + + DHG+ + V D D + R A Sbjct: 1310 GLRAMDPDRAVEEL-HITLDHGQTSVSVVDMDRRRFVELFTAARHRPLFDEIAGARAEAR 1368 Query: 120 VLEEHDALARRLACQLPVGRR----AHVLGAEAA 31 EE ALA+RLA L GR AH++ AE A Sbjct: 1369 QSEEGPALAQRLAALLCDGREREHLAHLIRAEVA 1402
>HELD_ECOLI (P15038) Helicase IV (EC 3.6.1.-) (75 kDa helicase)| Length = 684 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +3 Query: 144 KVHQVHGRHWAQRQCQLHH-DRQLRRHTVQVHDAAPGPGRQ 263 KV ++HG W + Q HH D RR + ++ + A G RQ Sbjct: 65 KVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQ 105
>CP84_BP186 (P41062) Hypothetical 37.8 kDa protein in GPA 5'region| Length = 334 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 Query: 256 GAKVNTVYQPGCTNVGC 306 G K N +YQ GC+ VGC Sbjct: 214 GIKPNPLYQQGCSRVGC 230
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 27.7 bits (60), Expect = 7.1 Identities = 21/69 (30%), Positives = 32/69 (46%) Frame = +3 Query: 93 APGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAPGPGRQGQH 272 AP +P+E+R L ++ G ++Q ++H + LR V P G+H Sbjct: 428 APAALSPEEKRE---LDRLLSGFGLE-REKQGAMYHPQHLRSRPV----GGPAAPSSGRH 479 Query: 273 RVPAGVHQR 299 VPA VH R Sbjct: 480 IVPAQVHVR 488
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 27.7 bits (60), Expect = 7.1 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Frame = -3 Query: 195 EAGIGVGPNDGHGLDGLCR-ERQRAAVLEE----HDALARRLA---CQLPVGRRAHVLGA 40 EAG GP G G G + ER LE+ DA R+LA L G GA Sbjct: 1113 EAG---GPEGGRGAGGRGQPERAGQQALEDAAAGQDAGVRQLAGHAAGLRGGEGGADAGA 1169 Query: 39 EAAEGELPGVAVK 1 E +G LPG V+ Sbjct: 1170 EGLDGRLPGAGVR 1182
>V_NDVU2 (Q06428) Nonstructural protein V| Length = 239 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -2 Query: 304 TRRWCTPAGTRC*PWRPGPGAASCTCTVC 218 T WC P+ C P R P SCTC C Sbjct: 192 TISWCNPS---CSPIRAEPRQYSCTCGSC 217
>CNC_DROME (P20482) Segmentation protein cap'n'collar| Length = 1383 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/72 (25%), Positives = 29/72 (40%) Frame = +3 Query: 60 VFQPGAGTRDGAPGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHD 239 V G+ +G +AP ++ + H V G Q+Q ++H +Q Sbjct: 1310 VSSASGGSLNGHVPTQAPMHSHQSHGMQAQHVVGGMSQQQQQQSRLPPHLQQQHHLQSQQ 1369 Query: 240 AAPGPGRQGQHR 275 PG +Q QHR Sbjct: 1370 QQPGGQQQQQHR 1381
>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1004 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 213 RRHTVQVHDAAPGPGRQGQHRVPAGVHQRRVQREQPTAQ 329 R H + P PG G H++ +G H VQR++ A+ Sbjct: 757 RIHQLFPSRVQPSPGSVGTHQLASGGHHIEVQRKEVQAR 795
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 27.7 bits (60), Expect = 7.1 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 18/93 (19%) Frame = +3 Query: 105 RAPQEQRRAAALGKVHQV---HGRHWAQRQCQL-------HHDRQLRRHTVQVHDAAPGP 254 +A Q+Q++ AA + HQ H +H +Q QL HH H Q H P Sbjct: 1026 QAAQQQQQQAAAQQQHQQQQQHQQHQQHQQQQLHSPLHHHHHQGHQSHHAQQQHHPQLSP 1085 Query: 255 GR---QGQHRVPAGV-----HQRRVQREQPTAQ 329 Q ++ A V HQ++ Q++Q Q Sbjct: 1086 HHLLSPQQQQLAAAVAAAAQHQQQQQQQQQQQQ 1118
>GATA8_ARATH (Q9M1U2) Putative GATA transcription factor 8| Length = 204 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = -2 Query: 304 TRRWCTPAGTRC*P-WRPGPGAASCTCTVC 218 T + C+ GTR P WR GP A C C Sbjct: 113 TDKSCSHCGTRKTPLWREGPRGAGTLCNAC 142
>MMP2_CHICK (Q90611) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72| kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) Length = 663 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 Query: 193 FTMIGNYEGTPCKYTTPLQG 252 FTM GN +G PCK+ QG Sbjct: 277 FTMGGNGDGQPCKFPFKFQG 296
>SBCC_VIBCH (Q9KM67) Nuclease sbcCD subunit C| Length = 1013 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = -1 Query: 197 VKLAL-ALGPMTAMDLMDFAESGSAPLFL 114 +KL L A GP + +DF + G APLFL Sbjct: 4 LKLILQAFGPFAGREEIDFTKLGDAPLFL 32
>DUSP_MYXVL (Q85297) Dual specificity protein phosphatase (EC 3.1.3.48) (EC| 3.1.3.16) Length = 178 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 106 VLLKNSGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYTTPLQGLGAK 264 VLLK++GALP + K M V + +GNY P G+G K Sbjct: 10 VLLKSTGALPKARVPTKMMRV------TDYVYLGNYNDAK---AAPTSGIGFK 53
>GAT4_YEAST (P40569) Protein GAT4| Length = 121 Score = 27.3 bits (59), Expect = 9.3 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = -2 Query: 262 WRPGPGAASCTCTVC 218 WR GP A+C C C Sbjct: 65 WREGPNGAACLCNAC 79
>CHBG_SHIFL (P59746) UPF0249 protein chbG| Length = 252 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/77 (25%), Positives = 32/77 (41%) Frame = -1 Query: 233 YLHGVPS*LPIMVKLALALGPMTAMDLMDFAESGSAPLFLRSTMPWRAVSRASSRLEDVH 54 ++H P PI+ + A G +D + +G P LRS+ + + E + Sbjct: 127 HVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAGDLPANLRSSQGFSSAFYGEEISEALF 186 Query: 53 TSLGPRLPKASCRGSPS 3 + L AS RG PS Sbjct: 187 LQV---LDDASHRGDPS 200
>SYS_BRAJA (Q89L00) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 443 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 8/45 (17%) Frame = -3 Query: 138 ERQRAAVLEEHDALARRLACQLPVG--------RRAHVLGAEAAE 28 ER+RAA+L A ARR A +G RA L AE AE Sbjct: 35 ERRRAAILASEQAQARRNAASKEIGDAKKAKDEARAATLMAEVAE 79
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +3 Query: 60 VFQPGAGTRDGAPGHRAPQ 116 V QPGA DG PG R PQ Sbjct: 1116 VGQPGAAGADGEPGARGPQ 1134
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +3 Query: 60 VFQPGAGTRDGAPGHRAPQ 116 V QPGA DG PG R PQ Sbjct: 1116 VGQPGAAGADGEPGARGPQ 1134
>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein| Length = 1049 Score = 27.3 bits (59), Expect = 9.3 Identities = 21/80 (26%), Positives = 27/80 (33%) Frame = +3 Query: 69 PGAGTRDGAPGHRAPQEQRRAAALGKVHQVHGRHWAQRQCQLHHDRQLRRHTVQVHDAAP 248 P A P + A ++ A VHQ + HH QL H Q Sbjct: 835 PQAIVSSSTPQYPAAEQPTPQALYATVHQSYP----------HHATQLHGHQPQPATTPT 884 Query: 249 GPGRQGQHRVPAGVHQRRVQ 308 G Q QH P+ V + Q Sbjct: 885 GSQPQSQHAAPSPVQHQAGQ 904
>NADD_BACHD (Q9KD91) Probable nicotinate-nucleotide adenylyltransferase (EC| 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) Length = 207 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = +1 Query: 115 KNSGALPLSAKSIKSMAVIGPNANASFTMIGN--YEGTPCKYTTPL 246 K G L S + M V GP N S TMI EG P Y PL Sbjct: 133 KRPGVLLDSPYQDQLMLVEGPEVNVSSTMIRERMTEGKPISYLLPL 178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.133 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,999,823 Number of Sequences: 219361 Number of extensions: 948044 Number of successful extensions: 3101 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 2966 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3094 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
