ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK121743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
2dbj|AK070445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3dbj|AK060164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
4gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 gen... 129 8e-27
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 129 8e-27
7ref|NM_197003.1| Oryza sativa (japonica cultivar-group) putative... 119 8e-24
8gb|AY105174.1| Zea mays PCO126977 mRNA sequence 76 1e-10
9gb|AY104364.1| Zea mays PCO105529 mRNA sequence 52 0.001
10ref|NM_188432.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
11dbj|AK061229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
12ref|NM_193318.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
14dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
15dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
16dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
17dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
18ref|NM_125687.2| Arabidopsis thaliana carboxylic ester hydrolase... 44 0.36
19gb|AY124825.1| Arabidopsis thaliana AT5g62930/MQB2_230 mRNA, com... 44 0.36
20gb|AF462837.1|AF462837 Arabidopsis thaliana AT5g62930/MQB2_230 m... 44 0.36
21emb|BX831608.1|CNS09ZRN Arabidopsis thaliana Full-length cDNA Co... 44 0.36
22emb|BX833303.1|CNS09ZAW Arabidopsis thaliana Full-length cDNA Co... 44 0.36
23emb|BX832574.1|CNS09ZN7 Arabidopsis thaliana Full-length cDNA Co... 44 0.36
24emb|BX833549.1|CNS09Z73 Arabidopsis thaliana Full-length cDNA Co... 44 0.36
25dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.36
26dbj|AB008491.1| Arabidopsis thaliana ARR6 gene for response regu... 44 0.36
27ref|XM_419943.1| PREDICTED: Gallus gallus similar to hypothetica... 42 1.4
28emb|BX931783.1| Gallus gallus finished cDNA, clone ChEST799l18 42 1.4
29emb|BX930468.1| Gallus gallus finished cDNA, clone ChEST634c19 42 1.4
30emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on ch... 40 5.6
31gb|AF327371.1| Sinorhizobium meliloti plasmid pRm1132f, complete... 40 5.6
32emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.6

>dbj|AK121743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086B04, full
           insert sequence
          Length = 1174

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                       
Query: 308 atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
           ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 151 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 210

                                                                 
Query: 368 cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           ||||||||||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 211 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaaggc 264



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>dbj|AK070445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C15, full
           insert sequence
          Length = 1237

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                       
Query: 308 atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
           ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 218 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 277

                                                                 
Query: 368 cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           ||||||||||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 278 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaaggc 331



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>dbj|AK060164.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B04, full
           insert sequence
          Length = 1015

 Score =  131 bits (66), Expect = 2e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                       
Query: 308 atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
           ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 106 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 165

                                                                 
Query: 368 cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           ||||||||||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 166 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaaggc 219



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>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete
              sequence
          Length = 163279

 Score =  129 bits (65), Expect = 8e-27
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                          
Query: 308    atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
              ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 120082 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 120023

                                                                   
Query: 368    cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaagg 420
              ||||||||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 120022 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaagg 119970



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  129 bits (65), Expect = 8e-27
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                            
Query: 308      atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
                ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 17252197 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 17252256

                                                                     
Query: 368      cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaagg 420
                ||||||||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 17252257 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaagg 17252309



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  129 bits (65), Expect = 8e-27
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                            
Query: 308      atcccaagacatgctgcggccacgtctggtgctctttggcgactccatcactgagcagtc 367
                ||||||||| ||| ||||||| ||  ||||||| || |||||||||||||| ||||||||
Sbjct: 17261237 atcccaagagatggtgcggccgcgcatggtgctgttcggcgactccatcacggagcagtc 17261296

                                                                     
Query: 368      cttccgccccggcggttggggagcggcccttgccgacacctactcccgcaagg 420
                ||||||||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 17261297 cttccgccccggcggctggggcgccgccctcgccgacacctactcccgcaagg 17261349



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>ref|NM_197003.1| Oryza sativa (japonica cultivar-group) putative esterase
           (OSJNBa0026O12.11), mRNA
          Length = 720

 Score =  119 bits (60), Expect = 8e-24
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                       
Query: 334 tggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcgg 393
           ||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| || |
Sbjct: 17  tggtgctgttcggcgactccatcacggagcagtccttccgccccggcggctggggcgccg 76

                                       
Query: 394 cccttgccgacacctactcccgcaaggc 421
           |||| |||||||||||||||||||||||
Sbjct: 77  ccctcgccgacacctactcccgcaaggc 104



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>gb|AY105174.1| Zea mays PCO126977 mRNA sequence
          Length = 1224

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 336 gtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcggcc 395
           |||||||| || ||||||||||| |||||||||||||||||||| || ||||| || || 
Sbjct: 352 gtgctcttcggggactccatcaccgagcagtccttccgccccggtggctggggtgccgca 411

                                     
Query: 396 cttgccgacacctactcccgcaaggc 421
           || || || |||||||| ||||||||
Sbjct: 412 ctggctgatacctactcgcgcaaggc 437



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>gb|AY104364.1| Zea mays PCO105529 mRNA sequence
          Length = 1358

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 322 tgcggccacgtctggtgctctttggcgactccatcactgagcagtccttc 371
           ||||||| || ||||||||||| ||||||||||| || |||| |||||||
Sbjct: 369 tgcggccgcggctggtgctcttcggcgactccataaccgagctgtccttc 418



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>ref|NM_188432.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 717

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 333 ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
           ||||||||||| |||||||||||||| ||||  ||||||  |  |||||| ||||| || 
Sbjct: 13  ctggtgctcttcggcgactccatcaccgagctctccttcgccgacggcggctggggcgcc 72

                                        
Query: 393 gcccttgccgacacctactcccgcaaggc 421
           ||||| ||||||  || | ||||||||||
Sbjct: 73  gccctcgccgaccacttcgcccgcaaggc 101



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>dbj|AK061229.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A03, full
           insert sequence
          Length = 1016

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 333 ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
           ||||||||||| |||||||||||||| ||||  ||||||  |  |||||| ||||| || 
Sbjct: 118 ctggtgctcttcggcgactccatcaccgagctctccttcgccgacggcggctggggcgcc 177

                                        
Query: 393 gcccttgccgacacctactcccgcaaggc 421
           ||||| ||||||  || | ||||||||||
Sbjct: 178 gccctcgccgaccacttcgcccgcaaggc 206



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>ref|NM_193318.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 483

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 333 ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
           ||||||||||| |||||| ||||||| ||||  ||||||  | ||||||| ||||| || 
Sbjct: 254 ctggtgctcttcggcgacaccatcaccgagctctccttcgccgccggcggctggggcgcc 313

                       
Query: 393 gcccttgccgac 404
           ||||| ||||||
Sbjct: 314 gccctcgccgac 325



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                            
Query: 333      ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
                ||||||||||| |||||| ||||||| ||||  ||||||  | ||||||| ||||| || 
Sbjct: 20097236 ctggtgctcttcggcgacaccatcaccgagctctccttcgccgccggcggctggggcgcc 20097295

                            
Query: 393      gcccttgccgac 404
                ||||| ||||||
Sbjct: 20097296 gccctcgccgac 20097307



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                           
Query: 333     ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
               ||||||||||| |||||||||||||| ||||  ||||||  |  |||||| ||||| || 
Sbjct: 6243762 ctggtgctcttcggcgactccatcaccgagctctccttcgccgacggcggctggggcgcc 6243703

                           
Query: 393     gcccttgccgac 404
               ||||| ||||||
Sbjct: 6243702 gccctcgccgac 6243691



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>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0051H17
          Length = 187471

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                        
Query: 333  ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
            ||||||||||| |||||| ||||||| ||||  ||||||  | ||||||| ||||| || 
Sbjct: 3614 ctggtgctcttcggcgacaccatcaccgagctctccttcgccgccggcggctggggcgcc 3673

                        
Query: 393  gcccttgccgac 404
            ||||| ||||||
Sbjct: 3674 gccctcgccgac 3685



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>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0065J17
          Length = 139014

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 333   ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
             ||||||||||| |||||| ||||||| ||||  ||||||  | ||||||| ||||| || 
Sbjct: 95198 ctggtgctcttcggcgacaccatcaccgagctctccttcgccgccggcggctggggcgcc 95257

                         
Query: 393   gcccttgccgac 404
             ||||| ||||||
Sbjct: 95258 gccctcgccgac 95269



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>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                          
Query: 333    ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
              ||||||||||| |||||||||||||| ||||  ||||||  |  |||||| ||||| || 
Sbjct: 105960 ctggtgctcttcggcgactccatcaccgagctctccttcgccgacggcggctggggcgcc 105901

                          
Query: 393    gcccttgccgac 404
              ||||| ||||||
Sbjct: 105900 gccctcgccgac 105889



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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                         
Query: 333   ctggtgctctttggcgactccatcactgagcagtccttccgccccggcggttggggagcg 392
             ||||||||||| |||||||||||||| ||||  ||||||  |  |||||| ||||| || 
Sbjct: 14828 ctggtgctcttcggcgactccatcaccgagctctccttcgccgacggcggctggggcgcc 14769

                         
Query: 393   gcccttgccgac 404
             ||||| ||||||
Sbjct: 14768 gccctcgccgac 14757



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>ref|NM_125687.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting
           on ester bonds AT5G62930 mRNA, complete cds
          Length = 1013

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 80  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 125



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>gb|AY124825.1| Arabidopsis thaliana AT5g62930/MQB2_230 mRNA, complete cds
          Length = 729

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 56  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 101



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>gb|AF462837.1|AF462837 Arabidopsis thaliana AT5g62930/MQB2_230 mRNA, complete cds
          Length = 1013

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 80  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 125



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>emb|BX831608.1|CNS09ZRN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH18ZF08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 956

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 61  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 106



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>emb|BX833303.1|CNS09ZAW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL43ZE12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 966

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 61  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 106



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>emb|BX832574.1|CNS09ZN7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH81ZD06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 875

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 69  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 114



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>emb|BX833549.1|CNS09Z73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL61ZH09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 884

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 27  ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 72



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>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2
          Length = 78145

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 376   ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
             |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 69603 ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 69648



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>dbj|AB008491.1| Arabidopsis thaliana ARR6 gene for response regulator 6, complete
           cds
          Length = 3600

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 376 ccggcggttggggagcggcccttgccgacacctactcccgcaaggc 421
           |||||||||||||| | || ||||||||| | ||||| ||||||||
Sbjct: 976 ccggcggttggggatctgctcttgccgacgcttactctcgcaaggc 931



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>ref|XM_419943.1| PREDICTED: Gallus gallus similar to hypothetical protein
           4833421E05Rik (LOC421930), mRNA
          Length = 1086

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 334 tggtgctctttggcgactccatcactgag 362
           |||||||||| || |||||||||||||||
Sbjct: 251 tggtgctcttcggggactccatcactgag 279



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>emb|BX931783.1| Gallus gallus finished cDNA, clone ChEST799l18
          Length = 905

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 334 tggtgctctttggcgactccatcactgag 362
           |||||||||| || |||||||||||||||
Sbjct: 69  tggtgctcttcggggactccatcactgag 97



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>emb|BX930468.1| Gallus gallus finished cDNA, clone ChEST634c19
          Length = 889

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 334 tggtgctctttggcgactccatcactgag 362
           |||||||||| || |||||||||||||||
Sbjct: 55  tggtgctcttcggggactccatcactgag 83



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>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a
             pseudogene similar to part of cytochrome b, the 5' end of
             a novel gene and a CpG island, complete sequence
          Length = 110121

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gctccctctccgcccccctg 79
             ||||||||||||||||||||
Sbjct: 26827 gctccctctccgcccccctg 26846



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>gb|AF327371.1| Sinorhizobium meliloti plasmid pRm1132f, complete sequence
          Length = 7212

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 51   cgcggcggcgctccctctccgccc 74
            |||||||||||||| |||||||||
Sbjct: 5650 cgcggcggcgctccttctccgccc 5627



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      tccccggagtgctccgccac 114
               ||||||||||||||||||||
Sbjct: 1266264 tccccggagtgctccgccac 1266283


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,005,018
Number of Sequences: 3902068
Number of extensions: 3005018
Number of successful extensions: 46983
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46860
Number of HSP's gapped (non-prelim): 123
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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