| Clone Name | bast65h06 |
|---|---|
| Clone Library Name | barley_pub |
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/52 (48%), Positives = 29/52 (55%) Frame = +2 Query: 125 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACTA 280 +CV K AN +Q I+YACG DC I S G CF P S+ AH SY A Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNA 427
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 47.4 bits (111), Expect = 9e-06 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +2 Query: 125 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACTA 280 +C+ K + +Q A+D+ACG G DC+ + C++P VVAH +YA A Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNA 412
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = +2 Query: 119 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYA 271 +M+CV K+DA+ + +++ACG+G A+C I PC+ P V +H S+A Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFA 411
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 44.3 bits (103), Expect = 8e-05 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 125 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYA 271 YC+ + +Q A+D+ACG G ++C++I C+QP +V H S+A Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFA 321
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 35.0 bits (79), Expect = 0.048 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 122 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYA 271 ++CV AN +++ + AC + C + C++P+S+ H SYA Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYA 438
>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor| Length = 1278 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 113 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 220 ++AMY C+ P + KA+ CGK AD T+ Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188
>ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 12) (ADAM-TS 12) (ADAM-TS12) Length = 1593 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 17/78 (21%) Frame = +2 Query: 116 DAMYCVCKSDANPVAMQKAIDYACGKGAD------------CTQITSNGPCFQPISVVAH 259 D C+C P +K AC K AD C + + C P +V A Sbjct: 1507 DQDQCLCDHKPRPPEFKKCNQQACKKSADLLCTKDKLSASFCQTLKAMKKCSVP-TVRAE 1565 Query: 260 CSYAC-----TATTRERR 298 C ++C T T R+RR Sbjct: 1566 CCFSCPQTHITHTQRQRR 1583
>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)| (Loop-tail-associated protein) (Loop-tail protein 1) Length = 521 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 94 QEHEDQRSRHCSKQRDGAR 38 ++H D+R RH SK RDG+R Sbjct: 21 RKHRDRRDRHRSKSRDGSR 39
>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2)| (Strabismus 1) (Loop-tail protein 1 homolog) Length = 521 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 94 QEHEDQRSRHCSKQRDGAR 38 ++H D+R RH SK RDG R Sbjct: 21 RKHRDRRDRHRSKSRDGGR 39
>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1| Length = 328 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +2 Query: 134 CKSDANPVAMQKAIDYACGKGA--DCTQITSNGPCFQPISVVAHCS 265 C+SDA PVA+Q A G GA C + + P P + A S Sbjct: 28 CRSDARPVALQPAFPLGNGDGAFVSCLPLAAARPSPSPPAAPARPS 73
>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide| dehydrogenase) Length = 479 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = +1 Query: 1 LLSALTSAAREELELHPAACCNGGSSGPHALARHVRR-------LRCDVLRVQVGREP 153 L+ AL +E+ + NG ++G AL V + L CD L V VGR P Sbjct: 230 LVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGGQAETLHCDALLVSVGRRP 287
>LRP2_RAT (P98158) Low-density lipoprotein receptor-related protein 2| precursor (Megalin) (Glycoprotein 330) (gp330) Length = 4660 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +2 Query: 134 CKSDANPVAMQKAIDYA--CGKGADCTQITSNGPCFQPISVVAHCSYACTAT 283 C +++ K D C +G D +TS C + V +C Y C T Sbjct: 272 CPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCHQT 323
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = +2 Query: 131 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYA 271 +C ++P Q + AC + C Q C +PI V CS A Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGA 183
>GLMM_THET2 (Q72JS7) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 437 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +1 Query: 70 GSSGPHALARHVRRLRCDVLRVQVGREPGGDAEGHRLRVRQGRRLHPDHL 219 GS+ P AL+R V L D+ G GD + + R+GR H DH+ Sbjct: 211 GSTHPEALSRFVVELGLDL-----GLAFDGDGDRVQFIDRKGRLFHGDHV 255
>MEGF6_RAT (O88281) Multiple epidermal growth factor-like domains 6 precursor| (EGF-like domain-containing protein 3) (Multiple EGF-like domain protein 3) Length = 1574 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = +2 Query: 182 ACGKGADCTQITSNGPCFQPISVVA-HCSYAC 274 AC KGA C +T G CF P HC AC Sbjct: 1137 ACRKGASCHHVT--GACFCPPGWRGPHCEQAC 1166
>BLT4_HORVU (P25307) BLT4 protein precursor| Length = 130 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -1 Query: 194 PCRTRSRWPSASPPG---SRPTCTRSTSHLSRRTWRARA 87 P RT P ASPPG + PT + S R T R RA Sbjct: 81 PARTTPAGPQASPPGAASASPTRSAPVSTALRSTDRTRA 119
>GLMM_THET8 (Q5SMH2) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 437 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +1 Query: 70 GSSGPHALARHVRRLRCDVLRVQVGREPGGDAEGHRLRVRQGRRLHPDHL 219 GS+ P AL+R V L D+ G GD + + R+GR H DH+ Sbjct: 211 GSTHPEALSRFVVELGLDL-----GIAFDGDGDRVQFIDRKGRLFHGDHV 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,214,410 Number of Sequences: 219361 Number of extensions: 523660 Number of successful extensions: 2028 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2024 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)