>ref|XM_475700.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 687

 Score =  105 bits (53), Expect = 8e-20
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgctcttgctcgccatgttcgccggctcagatgcgatgtactgcgtgtgcaagtcggacg 146
           |||||||||| ||||||| | | |||||||||| |  || ||||||||||||| | ||| 
Sbjct: 23  tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 82

                                                                       
Query: 147 cgaacccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
            || ||||| ||||||||||||||||||||||||||||||| |    |||||||||||||
Sbjct: 83  agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 142

                    
Query: 207 cccagatca 215
           |||||||||
Sbjct: 143 cccagatca 151

>dbj|AK101753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063E20, full
           insert sequence
          Length = 1020

 Score =  105 bits (53), Expect = 8e-20
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgctcttgctcgccatgttcgccggctcagatgcgatgtactgcgtgtgcaagtcggacg 146
           |||||||||| ||||||| | | |||||||||| |  || ||||||||||||| | ||| 
Sbjct: 144 tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 203

                                                                       
Query: 147 cgaacccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
            || ||||| ||||||||||||||||||||||||||||||| |    |||||||||||||
Sbjct: 204 agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 263

                    
Query: 207 cccagatca 215
           |||||||||
Sbjct: 264 cccagatca 272

>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
             complete sequence
          Length = 146712

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                         
Query: 127   ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 186
             ||||||||||||| | |||  || ||||| ||||||||||||||||||||||||||||||
Sbjct: 62527 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 62586

                                          
Query: 187   cggcaagggcgccgactgcacccagatca 215
             | |    ||||||||||||||||||||||
Sbjct: 62587 ctggcgcggcgccgactgcacccagatca 62615

>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
              complete sequence
          Length = 162772

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                          
Query: 127    ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 186
              ||||||||||||| | |||  || ||||| ||||||||||||||||||||||||||||||
Sbjct: 142341 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 142400

                                           
Query: 187    cggcaagggcgccgactgcacccagatca 215
              | |    ||||||||||||||||||||||
Sbjct: 142401 ctggcgcggcgccgactgcacccagatca 142429

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                            
Query: 127      ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcagaaggccatcgactacgcgtg 186
                ||||||||||||| | |||  || ||||| ||||||||||||||||||||||||||||||
Sbjct: 25199686 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 25199745

                                             
Query: 187      cggcaagggcgccgactgcacccagatca 215
                | |    ||||||||||||||||||||||
Sbjct: 25199746 ctggcgcggcgccgactgcacccagatca 25199774

>ref|XM_479043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 157 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
           |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 93  ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 142

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 157      ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
                |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 24452724 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 24452773

>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ2013_G04
          Length = 73667

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 157  ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
            |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 2534 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 2583

>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 157   ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
             |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 78591 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 78640

>dbj|AK112017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A05, full
           insert sequence
          Length = 1116

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 157 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
           |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 204 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 253

>dbj|AK111970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C09, full
           insert sequence
          Length = 1182

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 157 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
           |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 269 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 318

>dbj|AK111913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126J18, full
           insert sequence
          Length = 1119

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 157 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
           |||| |||||||| ||||||||||||||||||||  |||||| |||||||
Sbjct: 210 ggcgctgcagaagaccatcgactacgcgtgcggcgcgggcgcggactgca 259

>gb|BT017886.1| Zea mays clone EL01N0514G06.c mRNA sequence
          Length = 1129

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 157 ggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgc 205
           ||||||||||  ||| ||||||||||| |||| |||||| |||||||||
Sbjct: 229 ggcgatgcaggcggcgatcgactacgcctgcgccaagggggccgactgc 277

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                           
Query: 152     ccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgcacccag 211
               |||| ||||||||||||||| || |||||||||||  |     |||||||||||||||||
Sbjct: 3468411 ccggcggcgatgcagaaggcaattgactacgcgtgttggcgcagcgccgactgcacccag 3468470

                   
Query: 212     atca 215
               ||||
Sbjct: 3468471 atca 3468474

>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 152   ccggtggcgatgcagaaggccatcgactacgcgtgcggcaagggcgccgactgcacccag 211
             |||| ||||||||||||||| || |||||||||||  |     |||||||||||||||||
Sbjct: 85115 ccggcggcgatgcagaaggcaattgactacgcgtgttggcgcagcgccgactgcacccag 85174

                 
Query: 212   atca 215
             ||||
Sbjct: 85175 atca 85178

>ref|XM_469816.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 754

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 176 gactacgcgtgcggcaagggcgccgactgca 206
           ||||||||||||||| | |||||||||||||
Sbjct: 127 gactacgcgtgcggcgacggcgccgactgca 157

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 176      gactacgcgtgcggcaagggcgccgactgca 206
                ||||||||||||||| | |||||||||||||
Sbjct: 30914600 gactacgcgtgcggcgacggcgccgactgca 30914570

>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
             sequence
          Length = 122496

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 176   gactacgcgtgcggcaagggcgccgactgca 206
             ||||||||||||||| | |||||||||||||
Sbjct: 28490 gactacgcgtgcggcgacggcgccgactgca 28520

>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence
          Length = 216320

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 73    tcctctggtcctcatgctcttgc 95
             |||||||||||||||||||||||
Sbjct: 49892 tcctctggtcctcatgctcttgc 49914

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 176      gactacgcgtgcggcaagggcgccgactgca 206
                ||||||||||||||| | |||||||||||||
Sbjct: 31005123 gactacgcgtgcggcgacggcgccgactgca 31005093

>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete
             sequence
          Length = 245536

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 73    tcctctggtcctcatgctcttgc 95
             |||||||||||||||||||||||
Sbjct: 81103 tcctctggtcctcatgctcttgc 81081

>dbj|AK103836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148G11, full
           insert sequence
          Length = 820

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 176 gactacgcgtgcggcaagggcgccgactgca 206
           ||||||||||||||| | |||||||||||||
Sbjct: 211 gactacgcgtgcggcgacggcgccgactgca 241

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 26       cgagagaagagctcgagctcca 47
                ||||||||||||||||||||||
Sbjct: 12191283 cgagagaagagctcgagctcca 12191262



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      gccggctgggcgccactgcg 313
                ||||||||||||||||||||
Sbjct: 16592770 gccggctgggcgccactgcg 16592789

>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1759_F09
          Length = 149501

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 26     cgagagaagagctcgagctcca 47
              ||||||||||||||||||||||
Sbjct: 102742 cgagagaagagctcgagctcca 102721

>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0564H06
          Length = 146823

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 26     cgagagaagagctcgagctcca 47
              ||||||||||||||||||||||
Sbjct: 125662 cgagagaagagctcgagctcca 125641

>gb|BT017188.1| Zea mays clone EL01N0370G02.c mRNA sequence
          Length = 679

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 162 tgcagaaggccatcgactacgcgtgcggcaagggcgccgactgca 206
           ||||||||||  | |||||||||||||||   |||||||||||||
Sbjct: 132 tgcagaaggcactggactacgcgtgcggcgccggcgccgactgca 176

>gb|AC003669.1|AC003669 Homo sapiens Xp22 BAC GS-594A7 (Genome Systems Human BAC library)
              contains Bmx gene, complete sequence
          Length = 159446

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     tcctctggtcctcatgctctt 93
              |||||||||||||||||||||
Sbjct: 118659 tcctctggtcctcatgctctt 118679

>gb|AC162792.5| Mus musculus chromosome 7, clone RP24-187H10, complete sequence
          Length = 170668

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tactaccagagaacgccggc 299
              ||||||||||||||||||||
Sbjct: 166166 tactaccagagaacgccggc 166185

>gb|AC109227.12| Mus musculus chromosome 7, clone RP23-396C19, complete sequence
          Length = 205016

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tactaccagagaacgccggc 299
             ||||||||||||||||||||
Sbjct: 75178 tactaccagagaacgccggc 75159

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     ggtggcgatgcagaaggccatcga 177
               |||||||||||||||| |||||||
Sbjct: 3846413 ggtggcgatgcagaagtccatcga 3846390

>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence
          Length = 212548

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ctctggtcctcatgctcttg 94
              ||||||||||||||||||||
Sbjct: 111965 ctctggtcctcatgctcttg 111946

>gb|AC137152.2| Mus musculus BAC clone RP24-269A16 from chromosome 7, complete sequence
          Length = 179719

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   tactaccagagaacgccggc 299
             ||||||||||||||||||||
Sbjct: 36876 tactaccagagaacgccggc 36895

>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1123_B08
          Length = 134028

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    gccggctgggcgccactgcg 313
              ||||||||||||||||||||
Sbjct: 124995 gccggctgggcgccactgcg 125014

>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OJ1596_C06
          Length = 124721

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 gccggctgggcgccactgcg 313
           ||||||||||||||||||||
Sbjct: 909 gccggctgggcgccactgcg 928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,841,383
Number of Sequences: 3902068
Number of extensions: 1841383
Number of successful extensions: 34251
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33977
Number of HSP's gapped (non-prelim): 269
length of query: 314
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 292
effective length of database: 17,147,199,772
effective search space: 5006982333424
effective search space used: 5006982333424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)