Clone Information

BLAST Search Result

Clone Name	bast65g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	COX5B_MOUSE (P19536) Cytochrome c oxidase polypeptide Vb, mitoch...	61	6e-10
2	COX5B_RAT (P12075) Cytochrome c oxidase polypeptide Vb, mitochon...	57	1e-08
3	COX5B_BOVIN (P00428) Cytochrome c oxidase polypeptide Vb (EC 1.9...	56	2e-08
4	COX5B_PONPY (Q5REG2) Cytochrome c oxidase polypeptide Vb, mitoch...	56	2e-08
5	COX5B_HUMAN (P10606) Cytochrome c oxidase polypeptide Vb, mitoch...	56	2e-08
6	COX4_NEUCR (P06809) Cytochrome c oxidase polypeptide IV, mitocho...	47	8e-06
7	COX4_SCHPO (P79010) Cytochrome c oxidase polypeptide IV, mitocho...	45	3e-05
8	COX5_DICDI (P29505) Cytochrome c oxidase polypeptide 5 (EC 1.9.3...	45	5e-05
9	COX4_YEAST (P04037) Cytochrome c oxidase polypeptide IV, mitocho...	44	7e-05
10	BETA3_MESAU (O09029) Protein BETA3	32	0.37
11	OXAA_MYCPA (Q9L7M1) Membrane protein oxaA	32	0.37
12	COX5B_SOLTU (P80499) Cytochrome c oxidase polypeptide Vb (EC 1.9...	32	0.48
13	ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII...	32	0.48
14	COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor	32	0.48
15	LMP1_EBVR (P13198) Latent membrane protein 1 (LMP-1) (Protein p63)	31	0.63
16	ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII...	31	0.63
17	DIA_DROME (P48608) Protein diaphanous	31	0.63
18	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	31	0.82
19	VSPA_DABRU (P18964) Vipera russelli proteinase RVV-V alpha (EC 3...	30	1.1
20	NBP35_YEAST (P52920) Protein NBP35	30	1.1
21	VSPG_DABRU (P18965) Vipera russelli proteinase RVV-V gamma (EC 3...	30	1.4
22	MYCD_MOUSE (Q8VIM5) Myocardin (SRF cofactor protein) (Basic SAP ...	30	1.8
23	BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (...	30	1.8
24	DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (...	30	1.8
25	WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1....	30	1.8
26	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	30	1.8
27	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	30	1.8
28	COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor	29	2.4
29	LMP1_EBV (P03230) Latent membrane protein 1 (LMP-1) (Protein p63...	29	2.4
30	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	2.4
31	GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)	29	2.4
32	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	29	2.4
33	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	29	2.4
34	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	29	2.4
35	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	29	2.4
36	COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)	29	2.4
37	TPSN_CANFA (Q5TJE4) Tapasin precursor (TPSN) (TPN) (TAP-binding ...	29	3.1
38	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	29	3.1
39	ATG2_ASPFU (Q4WLK5) Autophagy-related protein 2	28	4.1
40	MILK2_HUMAN (Q8IY33) MICAL-like protein 2	28	4.1
41	CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 ...	28	4.1
42	CH38_DROME (P07183) Chorion protein S38	28	4.1
43	KLF15_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular Kru...	28	4.1
44	KLF15_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched kr...	28	4.1
45	YT55_STRFR (P20190) Hypothetical protein in transposon Tn4556 (F...	28	5.3
46	V_SENDO (P69287) Protein V	28	5.3
47	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	28	5.3
48	PHOSP_SENDO (O57285) Phosphoprotein (Protein P)	28	5.3
49	IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Ir...	28	5.3
50	CJ035_HUMAN (Q96D05) Protein C10orf35	28	5.3
51	CG24_YEAST (P24871) G2/mitotic-specific cyclin-4	28	5.3
52	W_SENDO (P69288) Protein W	28	5.3
53	COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibr...	28	5.3
54	TSC2_RAT (P49816) Tuberin (Tuberous sclerosis 2 homolog protein)	28	5.3
55	MTRH_METJA (Q58264) Tetrahydromethanopterin S-methyltransferase ...	28	5.3
56	TSC2_MOUSE (Q61037) Tuberin (Tuberous sclerosis 2 homolog protein)	28	5.3
57	RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulat...	28	5.3
58	CECR6_HUMAN (Q9BXQ6) Cat eye syndrome critical region protein 6	28	6.9
59	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	28	6.9
60	K1543_HUMAN (Q9P1Y5) Protein KIAA1543	28	6.9
61	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	28	6.9
62	IF2_LEIXX (Q6AG49) Translation initiation factor IF-2	28	6.9
63	VSP1_VIPLE (Q9PT41) Factor V-activating enzyme precursor (EC 3.4...	28	6.9
64	PPARG_XENLA (P37234) Peroxisome proliferator-activated receptor ...	28	6.9
65	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	28	6.9
66	MYCD_RAT (Q8R5I7) Myocardin	27	9.1
67	BETI_AGRT5 (Q8UH57) HTH-type transcriptional regulator betI	27	9.1
68	MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-...	27	9.1
69	GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precur...	27	9.1
70	GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 prec...	27	9.1
71	CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor	27	9.1
72	BAG4_MOUSE (Q8CI61) BAG family molecular chaperone regulator 4 (...	27	9.1
73	SREP_PENCH (Q92259) GATA factor SREP	27	9.1

>COX5B_MOUSE (P19536) Cytochrome c oxidase polypeptide Vb, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 128

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 37/91 (40%), Positives = 50/91 (54%)
 Frame = +2

Query: 92  RRTAPLLSADKPAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPA 271
           RRTA   +  +  A+   V      ATGLERE + A  +G   ++M PP    GTKE P 
Sbjct: 18  RRTARGAAVTRSMASGGGVPTDEEQATGLEREIMIAAQKGLDPYNMLPPKAASGTKEDPN 77

Query: 272 VIESYFDKRIVGCPGDEGEDEHDLVWFWLKK 364
           ++ S  +KRIVGC  +  ED   ++WFWL K
Sbjct: 78  LVPSISNKRIVGCICE--EDNCTVIWFWLHK 106

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>COX5B_RAT (P12075) Cytochrome c oxidase polypeptide Vb, mitochondrial|
           precursor (EC 1.9.3.1) (VIA*)
          Length = 129

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 33/83 (39%), Positives = 47/83 (56%)
 Frame = +2

Query: 110 LSADKPAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYF 289
           ++A +  A+   V      ATGLERE + A  +G   ++M PP    GTKE P ++ S  
Sbjct: 25  VAATRSMASGGGVPTDEEQATGLEREIMIAAQRGLDPYNMLPPKAASGTKEDPNLVPSVS 84

Query: 290 DKRIVGCPGDEGEDEHDLVWFWL 358
           +KRIVGC  +  ED   ++WFWL
Sbjct: 85  NKRIVGCICE--EDNCTVIWFWL 105

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>COX5B_BOVIN (P00428) Cytochrome c oxidase polypeptide Vb (EC 1.9.3.1) (VI)|
          Length = 98

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 167 ATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLV 346
           ATGLERE + A  +G+  +++  P    GTKE P ++ S  +KRIVGC  +  ED   ++
Sbjct: 13  ATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICE--EDNSTVI 70

Query: 347 WFWLKK 364
           WFWL K
Sbjct: 71  WFWLHK 76

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>COX5B_PONPY (Q5REG2) Cytochrome c oxidase polypeptide Vb, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 129

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +2

Query: 167 ATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLV 346
           ATGLERE + A  +G   +++  P G  GT+E P ++ S  +KRIVGC  +  ED   +V
Sbjct: 44  ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICE--EDNTSVV 101

Query: 347 WFWLKK 364
           WFWL K
Sbjct: 102 WFWLHK 107

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>COX5B_HUMAN (P10606) Cytochrome c oxidase polypeptide Vb, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 129

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +2

Query: 167 ATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLV 346
           ATGLERE + A  +G   +++  P G  GT+E P ++ S  +KRIVGC  +  ED   +V
Sbjct: 44  ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCICE--EDNTSVV 101

Query: 347 WFWLKK 364
           WFWL K
Sbjct: 102 WFWLHK 107

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>COX4_NEUCR (P06809) Cytochrome c oxidase polypeptide IV, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 186

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +2

Query: 125 PAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDP-PVGPFGTKEAPAVIESYFDKRI 301
           P AA  +V   +  ATGLER E+  +++G   FDM P      GT E P  + S  D++ 
Sbjct: 56  PGAAPGTVPTDLEQATGLERLEILGKMEGVDVFDMKPLDASRRGTMENPISVRSAGDEQY 115

Query: 302 VGCPGDEGEDEHDLVWFWLKK 364
            GC G    D H+++W  + +
Sbjct: 116 AGCTGFPA-DSHNVIWLTMTR 135

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>COX4_SCHPO (P79010) Cytochrome c oxidase polypeptide IV, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 164

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 167 ATGLEREELEAELQGKKRFDMDP-PVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDL 343
           ATGLER EL +EL G+  FDM P      GT   P ++ S    R +GC G      H+L
Sbjct: 72  ATGLERYELLSELSGRDAFDMKPLDASRKGTLTDPIMVTSLDPYRHIGCTGSP-SGSHNL 130

Query: 344 VWFWLKK 364
           +W  + K
Sbjct: 131 IWMTVYK 137

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>COX5_DICDI (P29505) Cytochrome c oxidase polypeptide 5 (EC 1.9.3.1)|
           (Cytochrome c oxidase polypeptide V)
          Length = 119

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = +2

Query: 176 LEREELEAELQGKKRFDMDPPV--GPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLVW 349
           L+  EL    +  KR D    V  G FGT ++P ++ES F  RIV C G +GE EHD+++
Sbjct: 29  LDASELNFVRRNIKREDFGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILF 87

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>COX4_YEAST (P04037) Cytochrome c oxidase polypeptide IV, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 155

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +2

Query: 125 PAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDP-PVGPFGTKEAPAVIESYFDKRI 301
           P A   +V   +   TGL R EL  +L+G   FD  P      GT + P +IESY D R 
Sbjct: 49  PGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRY 108

Query: 302 VGCPGDEGEDEHDLVW 349
           VGC G      H ++W
Sbjct: 109 VGCTGSPA-GSHTIMW 123

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>BETA3_MESAU (O09029) Protein BETA3|
          Length = 367

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +1

Query: 64  SHLHGGRGLPPHCPSPLRGQAGGGSDECGG 153
           +HLHGG GLP   P    G  GGGS   GG
Sbjct: 189 AHLHGGAGLP---PGGSTGSGGGGSGGGGG 215

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>OXAA_MYCPA (Q9L7M1) Membrane protein oxaA|
          Length = 353

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 19  RRSRLAPLPGHRPGRSHLHG-GRGLPPHCPSP----LRGQAGGGSD 141
           RR+  AP PG +P R+   G G G+      P      GQAGGGSD
Sbjct: 291 RRAANAPAPGAKPKRNLKAGAGNGVDADAAQPDAGATEGQAGGGSD 336

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>COX5B_SOLTU (P80499) Cytochrome c oxidase polypeptide Vb (EC 1.9.3.1)|
           (Fragment)
          Length = 28

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 146 VEDVMPIATGLEREELEAE 202
           VEDVMPIATG ERE L A+
Sbjct: 10  VEDVMPIATGHEREXLXAQ 28

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>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 12/67 (17%)
 Frame = +1

Query: 7   PPRCRRSRLAPLP----------GHRPGRSHLHGGRGLPPHCPSPLRGQA--GGGSDECG 150
           P R   +R APLP          G +PGR H H  +G       PL GQ   G    E  
Sbjct: 167 PHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQG------GPLLGQGCQGQPQGEAV 220

Query: 151 GCHAHSH 171
           G H+  H
Sbjct: 221 GSHSKGH 227

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>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor|
          Length = 3063

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
 Frame = +1

Query: 7    PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPS------PLRGQAGGGS 138
            PP    SR  P P  RPG S + G  G P +C S      P  GQ+  GS
Sbjct: 3013 PPGSTGSRGPPGPPGRPGNSGIQGPPGPPGYCDSSQCASIPYNGQSYPGS 3062

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>LMP1_EBVR (P13198) Latent membrane protein 1 (LMP-1) (Protein p63)|
          Length = 386

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 58  GRSHLHGGRGLPPHCPSPLRGQAGGGSDE 144
           G SH  G  G+ PH P+ L G +G G D+
Sbjct: 345 GHSHDSGHDGIDPHLPTLLLGTSGSGGDD 373

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>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
 Frame = +1

Query: 13  RCRRSRLAPL----------PGHRPGRSHLHGGRGLPPHCPSPLRGQAGG 132
           R   +R APL          PG +PGR H H  +G P  CP   +GQ  G
Sbjct: 169 RASPTRTAPLRMPEGPEPAAPGKQPGRGHTHAAQGGPLLCPG-CQGQPQG 217

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>DIA_DROME (P48608) Protein diaphanous|
          Length = 1091

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = +1

Query: 4   PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGG 132
           PPP        P P   PGR+    G G PP  P P+ G+AGG
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRA----GGGPPPPPPPPMPGRAGG 553



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 76  GGRGLPPHCPSPLRGQAGGG 135
           GG G PP  P P+ G+AGGG
Sbjct: 519 GGGGAPPPPPPPMPGRAGGG 538

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 24/58 (41%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +1

Query: 4   PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQA--GGGSDECGGCHAHSH 171
           PPP    S  AP P H PG    HG R      PSP  G A   GG     G H  SH
Sbjct: 118 PPP----SYGAPPPSHGPGHLPSHGQRP-----PSPSHGHAPPSGGHTPPRGQHPPSH 166

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>VSPA_DABRU (P18964) Vipera russelli proteinase RVV-V alpha (EC 3.4.21.95)|
           (Factor V-activating proteinase alpha) (Snake venom
           factor V activator alpha)
          Length = 236

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 58  GRSHLHGGRGLPPHCPSPLRGQAGGGSDECG 150
           GR   HG  G P  C   ++G   GGS+ CG
Sbjct: 174 GRDTCHGDSGGPLICNGQIQGIVAGGSEPCG 204

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>NBP35_YEAST (P52920) Protein NBP35|
          Length = 328

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 91  PPHCPSPLRGQAGGGSDECGGC 156
           P HCP P    AG  SD CGGC
Sbjct: 24  PEHCPGPESDMAGK-SDACGGC 44

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>VSPG_DABRU (P18965) Vipera russelli proteinase RVV-V gamma (EC 3.4.21.95)|
           (Factor V-activating proteinase gamma) (Snake venom
           factor V activator gamma)
          Length = 236

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 58  GRSHLHGGRGLPPHCPSPLRGQAGGGSDECG 150
           GR   HG  G P  C   + G   GGS+ CG
Sbjct: 174 GRDTCHGDSGGPLICNGEMHGIVAGGSEPCG 204

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>MYCD_MOUSE (Q8VIM5) Myocardin (SRF cofactor protein) (Basic SAP coiled-coil|
           transcription activator 2)
          Length = 935

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 4   PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGG 132
           PPP C  ++L P      G++H+     L P C SP     GG
Sbjct: 599 PPPACETAQLLPHCVESSGQTHVLSSTFLSPQC-SPQHSPLGG 640

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>BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (BCL-2-binding|
           athanogene-1) (BAG-1)
          Length = 355

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/51 (37%), Positives = 21/51 (41%)
 Frame = +1

Query: 10  PRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGCHA 162
           PR R    AP P   P +S     RGLPP   S +R  A G      G  A
Sbjct: 19  PRLR----APRPAREPRQSESRAERGLPPSQRSSVRSAASGHDRSTRGAPA 65

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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 43  PGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGG 153
           PG   G+    GGRG   H  +   G  GGG   CGG
Sbjct: 11  PGKGDGKGSSRGGRGGKGHM-NKSHGGGGGGGGSCGG 46

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>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 409

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 386 TGHSCGSSFSTRTIRDHAHPLLHHQGNLLFSCQNRTQ*QLA 264
           TG +CG  + T      A  L HH   ++F+C+NR+  + A
Sbjct: 127 TGANCGIGYET------ARSLAHHGCEIIFACRNRSSAEAA 161

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +1

Query: 46  GHRPGRSHLHGG---RGLPPHCPSPLRGQAGGGSDECGGCHAH 165
           GHRP     H G   RG PPH      G  GGG     G H+H
Sbjct: 808 GHRPHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSH 850

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +1

Query: 46  GHRPGRSHLHGG---RGLPPHCPSPLRGQAGGGSDECGGCHAH 165
           GHRP     H G   RG PPH      G  GGG     G H+H
Sbjct: 792 GHRPHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSH 834

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>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor|
          Length = 3119

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 7    PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPS 108
            PP    SR  P P  RPG S + G  G P +C S
Sbjct: 3014 PPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDS 3047

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>LMP1_EBV (P03230) Latent membrane protein 1 (LMP-1) (Protein p63) [Contains:|
           Protein p25]
          Length = 386

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 58  GRSHLHGGRGLPPHCPSPLRGQAGGGSDE 144
           G SH  G  G  PH P+ L G +G G D+
Sbjct: 345 GHSHDSGHGGGDPHLPTLLLGSSGSGGDD 373

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +1

Query: 4    PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAG 129
            PPP  R SR     G RPG S     RG+PP  P     +AG
Sbjct: 916  PPPPRRESRTETRWGPRPGSSR----RGIPPEEPGAPPRRAG 953

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>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)|
          Length = 2260

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 1    RPPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECG 150
            R   +  +S   P      GR+  H  RGLP   PS + GQ GG S   G
Sbjct: 1404 REDTQAAKSPSVPQDAAAEGRTSSHASRGLPKSTPSSM-GQGGGLSGPPG 1452

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +1

Query: 4    PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAG 129
            PPP  R SR     G RPG S     RG+PP  P     +AG
Sbjct: 913  PPPPRRESRTETRWGPRPGSSR----RGIPPEEPGAPPRRAG 950

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 43  PGHRPGRSHL-HGGRG--LPPHCPSPLRGQAGGGS 138
           PG  PG  H   GGRG   PP  P P RG  GG S
Sbjct: 696 PGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRS 730



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +1

Query: 40  LPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGCHAHSH 171
           +PGHR      H  RG PPH      G   GG    G    HSH
Sbjct: 864 VPGHRG-----HDHRGPPPHEHRGHDGPGHGGGGHRGHDGGHSH 902

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 43  PGHRPGRSHL-HGGRG--LPPHCPSPLRGQAGGGS 138
           PG  PG  H   GGRG   PP  P P RG  GG S
Sbjct: 696 PGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRS 730



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +1

Query: 40  LPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGCHAHSH 171
           +PGHR      H  RG PPH      G   GG    G    HSH
Sbjct: 864 VPGHRG-----HDHRGPPPHEHRGHDGPGHGGGGHRGHDGGHSH 902

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +1

Query: 43  PGHRPGRSHL-HGGRG--LPPHCPSPLRGQAGGGS 138
           PG  PG  H   GGRG   PP  P P RG  GG S
Sbjct: 699 PGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRS 733

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>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)|
          Length = 317

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 7   PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPS 108
           PP    SR  P P  RPG S + G  G P +C S
Sbjct: 212 PPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDS 245

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>TPSN_CANFA (Q5TJE4) Tapasin precursor (TPSN) (TPN) (TAP-binding protein)|
          Length = 449

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +1

Query: 4   PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPP--HCPSPLRG 120
           PPP C  SR  PLP      +     RGL P   CP  L G
Sbjct: 87  PPPHCELSRFIPLP------ASARWARGLTPGRSCPRALDG 121

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = +1

Query: 43  PGHRPGRSHL-HGGRG---LPPHCPSPLRGQAGGGS 138
           PG  PG  H   GGRG    PP  P P RG  GG S
Sbjct: 696 PGPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRS 731

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>ATG2_ASPFU (Q4WLK5) Autophagy-related protein 2|
          Length = 2160

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 125  PAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIE 280
            P+ A     +V+PI      E++ A   G   F MDPP G     EAP ++E
Sbjct: 1457 PSVAVKYRTEVLPI------EDMLASFSGDA-FAMDPPPGQAEITEAPTIVE 1501

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>MILK2_HUMAN (Q8IY33) MICAL-like protein 2|
          Length = 904

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +2

Query: 104 PLLSADKPAAAATSVEDVMPIATG-LEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIE 280
           PL  A+ PA    +V   + +    L  EE++ +LQ  +R             +A  +  
Sbjct: 710 PLSPANVPALPGETVTSPVRLHPDYLSPEEIQRQLQDIER-----------RLDALELRG 758

Query: 281 SYFDKRIVGCPGDEGEDEHDLVWFWL 358
              +KR+    GD+ ED   + WFWL
Sbjct: 759 VELEKRLRAAEGDDAEDSLMVDWFWL 784

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>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
           (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen
           240 kDa protein) (Mi2-alpha) (Zinc-finger helicase)
           (hZFH)
          Length = 2000

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 173 GLEREELEAELQ-GKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHD 340
           G E E  E++L  G        P GP  TK+          K+++GCP   GE+E D
Sbjct: 316 GPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVD 372

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>CH38_DROME (P07183) Chorion protein S38|
          Length = 306

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 46  GHRPGRS-HLHGGRGLPPHCPSPLRG 120
           GH  G S H HGG G  PH P P  G
Sbjct: 213 GHGHGHSGHGHGGHGAGPHGPGPHDG 238

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>KLF15_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular Kruppel-like|
           factor)
          Length = 415

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 61  RSHLHGGRGLPPHCPSPLRGQAGGGSDECGGCHAH 165
           RSHLH        C  P  G +GGG+   G   AH
Sbjct: 178 RSHLHPESAGRERCTPPPGGTSGGGAQSAGEGPAH 212

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>KLF15_HUMAN (Q9UIH9) Krueppel-like factor 15 (Kidney-enriched kruppel-like|
           factor)
          Length = 416

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 55  PGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGG 153
           P +SHLH G      C  P  G + GG+   GG
Sbjct: 177 PHKSHLHPGSSGRERCSPPPGGASAGGAQGPGG 209

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>YT55_STRFR (P20190) Hypothetical protein in transposon Tn4556 (Fragment)|
          Length = 439

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +1

Query: 7   PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGS 138
           PP+C   ++   P  +P   H   GRGL      P R    GG+
Sbjct: 211 PPQCLLPQVHLTPRDQPVNGHAGAGRGLGVRHREPFRPGRNGGA 254

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>V_SENDO (P69287) Protein V|
          Length = 369

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 7   PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLR 117
           P   RRS  APLP  R GR+  + GRG+ P  P   R
Sbjct: 174 PEEIRRS--APLPDEREGRAD-NNGRGVEPGSPHSAR 207

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 1   RPPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGS 138
           RP P    + + P PG  P ++   GGRG          GQAGGG+
Sbjct: 311 RPSP----AMMPPTPGQMPAKAPGKGGRG----------GQAGGGA 342

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>PHOSP_SENDO (O57285) Phosphoprotein (Protein P)|
          Length = 568

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 7   PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLR 117
           P   RRS  APLP  R GR+  + GRG+ P  P   R
Sbjct: 174 PEEIRRS--APLPDEREGRAD-NNGRGVEPGSPHSAR 207

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>IRX5_HUMAN (P78411) Iroquois-class homeodomain protein IRX-5 (Iroquois|
           homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A)
          Length = 482

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 76  GGRGLP-PHCPSPLRGQAGGGS 138
           G  G P P CP P+ GQA GGS
Sbjct: 352 GNEGSPCPPCPGPIAGQALGGS 373

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>CJ035_HUMAN (Q96D05) Protein C10orf35|
          Length = 121

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 22  RSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAG 129
           R+   P  G  P +S  + G G PP  P P + QAG
Sbjct: 19  RTTTQPPRGSIPRQSFFNRGHGAPPGGPGPRQQQAG 54

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>CG24_YEAST (P24871) G2/mitotic-specific cyclin-4|
          Length = 460

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 185 EELEAELQGKKRFDMDP---PVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLV 346
           E+ + E+Q     D+D    P+ P    E    ++  F+K     P    +D HD+V
Sbjct: 146 EDFDGEMQDVIEEDVDSQIEPLSPINNDEIQTELDRAFEKYFRSVPNPLDDDTHDVV 202

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>W_SENDO (P69288) Protein W|
          Length = 318

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 7   PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLR 117
           P   RRS  APLP  R GR+  + GRG+ P  P   R
Sbjct: 174 PEEIRRS--APLPDEREGRAD-NNGRGVEPGSPHSAR 207

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>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 7    PPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPS 108
            PP    SR  P P  RPG + + G  G P +C S
Sbjct: 3017 PPGSTGSRGPPGPPGRPGNAGIRGPPGPPGYCDS 3050

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>TSC2_RAT (P49816) Tuberin (Tuberous sclerosis 2 homolog protein)|
          Length = 1809

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +2

Query: 95   RTAPLLSADKPAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAV 274
            RT   L  +K     TSV        GL+      +LQG      DP      TKEAPA 
Sbjct: 1056 RTKTWLVGNKLVTVTTSVGTGTRSLLGLD----SGDLQGGSASSSDPGTHVRQTKEAPAK 1111

Query: 275  IESYFDKRI 301
            +ES   +++
Sbjct: 1112 LESQAGQQV 1120

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>MTRH_METJA (Q58264) Tetrahydromethanopterin S-methyltransferase subunit H (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit H)
          Length = 319

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +2

Query: 197 AELQGKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGEDEHDLVWFWLKKMSR 373
           AE  G K   +D  V P G     AV  S+  K + G P   G       W WL++  +
Sbjct: 184 AEKAGIKYPLIDTAVTPLGNGAGAAVRASFAVKALFGYPVGSGIHNIPSAWDWLREFRK 242

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>TSC2_MOUSE (Q61037) Tuberin (Tuberous sclerosis 2 homolog protein)|
          Length = 1814

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +2

Query: 95   RTAPLLSADKPAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAV 274
            RT   L  +K     TSV        GL+      +LQG      DP      TKEAPA 
Sbjct: 1056 RTKTWLVGNKLVTVTTSVGTGTRSLLGLD----SGDLQGGSDSSSDPSTHVRQTKEAPAK 1111

Query: 275  IESYFDKRI 301
            +ES   +++
Sbjct: 1112 LESQAGQQV 1120

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>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +1

Query: 37  PLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGC 156
           P    RP R H          C SPL G  G G+    GC
Sbjct: 604 PASSPRPSRGHRRSAS-----CGSPLSGNTGEGTSRSAGC 638

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>CECR6_HUMAN (Q9BXQ6) Cat eye syndrome critical region protein 6|
          Length = 578

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 46  GHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGC 156
           G+R   S   GG G PP  P P      GGS + G C
Sbjct: 522 GNRASPSRARGGYGAPPSAPPPPPPPPQGGS-QLGHC 557

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>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +1

Query: 1   RPPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSP 111
           RPPP        P  GH P     HG    PPH P P
Sbjct: 327 RPPPHGHHPHGPPPHGHHPHGPPPHGH---PPHGPPP 360

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>K1543_HUMAN (Q9P1Y5) Protein KIAA1543|
          Length = 1249

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 101  APLLSA-----DKPAAAATSVEDVMPIATGLEREELEAELQGKKRFDMDPPVGP 247
            APL+SA       PAA A + E+V P      R+E E   Q K   D+D  + P
Sbjct: 947  APLVSAVPMATPAPAARAPAEEEVGPRKGDFTRQEYERRAQLKLMDDLDKVLRP 1000

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 37  PLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDECGGCHAH 165
           PLPG RPG      G   PP  PS + G  GG   +  G + +
Sbjct: 811 PLPGGRPG------GSLPPPMLPSRVSGAVGGAIVQQSGANRY 847

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>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 8/62 (12%)
 Frame = +1

Query: 1   RPPPRCRRSRLAPLPGH------RPGRSHLHGGRGLP--PHCPSPLRGQAGGGSDECGGC 156
           RP P        P PG       RPG     GG G P     P    G AGGG    GG 
Sbjct: 191 RPSPSNIPRPAPPRPGSPRIGAPRPGGGQRQGGGGRPGFQQRPGSAGGGAGGGLQRPGGA 250

Query: 157 HA 162
            A
Sbjct: 251 GA 252

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>VSP1_VIPLE (Q9PT41) Factor V-activating enzyme precursor (EC 3.4.21.-) (FVA)|
          Length = 259

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 58  GRSHLHGGRGLPPHCPSPLRGQAGGGSDECG 150
           G+    G  G P  C   ++G   GGSD CG
Sbjct: 198 GKDTCEGDSGGPLICNGQIQGIVSGGSDPCG 228

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>PPARG_XENLA (P37234) Peroxisome proliferator-activated receptor gamma|
           (PPAR-gamma)
          Length = 477

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 34  APLPGHRPGRSHLHGGRGLPPHCPSPLRGQAGGGSDE 144
           A  PGH  G+SH    RG   H         GGGSD+
Sbjct: 233 AKAPGHPDGQSHRQNSRGYTRH----ELADDGGGSDQ 265

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 18/69 (26%)
 Frame = +1

Query: 1   RPPPRC---RRSRLAPLPGH--RPGRSHLHGGRGLPPH-CPSP------------LRGQA 126
           RP PR     RS  AP PG   RPG +   GG+G P    P P             R Q 
Sbjct: 185 RPAPRPGGGNRSGNAPRPGGGPRPGGNRPQGGQGGPAERAPRPGGRGGQPRPQGGSRSQQ 244

Query: 127 GGGSDECGG 153
            GG +  GG
Sbjct: 245 SGGQERQGG 253

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>MYCD_RAT (Q8R5I7) Myocardin|
          Length = 938

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 4   PPPRCRRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPLRGQAG 129
           PPP C  ++L P      G++H+     L P C SP     G
Sbjct: 602 PPPACETAQLLPHCVESSGQTHVLSSTFLSPQC-SPQHSPLG 642

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>BETI_AGRT5 (Q8UH57) HTH-type transcriptional regulator betI|
          Length = 206

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 245 PFGTKEAPAVIESYFDKRIVGCP 313
           P G   APA++E YFD ++   P
Sbjct: 172 PLGLASAPALVEDYFDMQLKSFP 194

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>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 46  GHRPGRSHLHG-GRGLPPHCPSPLRGQAGGGSDECG 150
           G   GR    G GRG P    S L G  GGG+  CG
Sbjct: 81  GRGRGRGRGRGRGRGRPQSGGSGLGGDGGGGAGGCG 116

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>GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precursor|
           (G-protein coupled receptor CNS1)
          Length = 603

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 182 REELEAELQGKKRFDMDPPVG 244
           RE+LEAE++G   +D+ PP G
Sbjct: 72  REKLEAEVRGATSWDLPPPRG 92

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>GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 precursor|
          Length = 600

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 182 REELEAELQGKKRFDMDPPVG 244
           RE+LEAE++G   +D+ PP G
Sbjct: 72  REKLEAEVRGATSWDLPPPRG 92

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>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 230  DPPVGPFGTKEAPAVIESYFDKRIVGCPGDEGED 331
            D PVG  G   AP ++    D+ + G PG +G D
Sbjct: 1003 DGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLD 1036

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>BAG4_MOUSE (Q8CI61) BAG family molecular chaperone regulator 4|
           (BCL2-associated athanogene 4) (BAG-4) (Silencer of
           death domains)
          Length = 457

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 19  RRSRLAPLPGHRPGRSHLHGGRGLPPHCPSPL 114
           RRS   P  G   GR +  GG  +P H P PL
Sbjct: 5   RRSGYGPSDGPSYGRYYGPGGGDVPVHVPPPL 36

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>SREP_PENCH (Q92259) GATA factor SREP|
          Length = 532

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
 Frame = +1

Query: 1   RPPPRCRRSRLAPLPGHRPGRSHLHG---GRGLPPHCPSPLRGQAGGGSDECGGCHAHSH 171
           RP  R R           P  SH  G   G G    CP        GG++ C GC A+++
Sbjct: 129 RPTKRNRMQSEGAEKPPPPASSHCGGSSEGGGCKGSCPGGGSCNGTGGAEGCDGCPAYNN 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,143,673
Number of Sequences: 219361
Number of extensions: 890548
Number of successful extensions: 3554
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3528
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result