ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast65g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473680.1| Oryza sativa (japonica cultivar-group), predic... 228 1e-56
2emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 228 1e-56
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
4dbj|AK120315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
5dbj|AK063206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
6ref|XM_473679.1| Oryza sativa (japonica cultivar-group), predic... 198 1e-47
7gb|AY109649.1| Zea mays CL122_1 mRNA sequence 123 5e-25
8ref|XM_467200.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
9ref|XM_467198.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
10dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
11dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
12ref|XM_467202.1| Oryza sativa (japonica cultivar-group), mRNA 80 6e-12
13dbj|AK059947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
14ref|XM_473678.1| Oryza sativa (japonica cultivar-group), predic... 78 2e-11
15dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
16ref|XM_467201.1| Oryza sativa (japonica cultivar-group), mRNA 64 4e-07
17ref|XM_473677.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
18dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
19dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
21dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
22ref|XM_473675.1| Oryza sativa (japonica cultivar-group), predic... 48 0.022
23dbj|AK061584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
24dbj|AK071528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.085
25dbj|AK059793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.085
26gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, comple... 44 0.34
27dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.34
28ref|XM_566179.1| Anopheles gambiae str. PEST ENSANGP00000028877 ... 44 0.34
29gb|AC024908.22| Homo sapiens 10 BAC RP11-446F3 (Roswell Park Can... 42 1.3
30ref|NM_117875.2| Arabidopsis thaliana unknown protein AT4G17670 ... 40 5.3
31ref|XM_470528.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
32gb|BC006760.1| Mus musculus YKT6 homolog (S. Cerevisiae), mRNA (... 40 5.3
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.3
34ref|NM_019661.2| Mus musculus YKT6 homolog (S. Cerevisiae) (Ykt6... 40 5.3
35ref|XM_843186.1| PREDICTED: Canis familiaris similar to cyclin M... 40 5.3
36ref|XM_811649.1| Trypanosoma cruzi strain CL Brener translation ... 40 5.3
37ref|XM_813814.1| Trypanosoma cruzi strain CL Brener translation ... 40 5.3
38gb|AY117186.1| Arabidopsis thaliana unknown protein (At4g17670) ... 40 5.3
39gb|AY064001.1| Arabidopsis thaliana unknown protein (At4g17670) ... 40 5.3
40emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 5.3
41emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 5.3
42emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on ch... 40 5.3
43dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 5.3
44dbj|AK147098.1| Mus musculus 17 days pregnant adult female amnio... 40 5.3
45dbj|AK159253.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 5.3
46dbj|AK150472.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.3
47dbj|AK088286.1| Mus musculus 2 days neonate thymus thymic cells ... 40 5.3
48dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
50gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, compl... 40 5.3
51gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 5.3
52dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.3
53gb|AY088445.1| Arabidopsis thaliana clone 6709 mRNA, complete se... 40 5.3
54gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
55dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.3
56dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
57dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
58dbj|AK099407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
59dbj|AK071722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
60dbj|AK063688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
61gb|AY107714.1| Zea mays PCO121192 mRNA sequence 40 5.3
62gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 5.3
63gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome... 40 5.3
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.3 
>ref|XM_473680.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 315

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 123 tgcgccttcttcttcgacgccgagccggtgggcgagccctgttagcacgcgctggacgcg 182
           ||||||||||||||||||||||||||||| |||||| || |   ||||||||||||||| 
Sbjct: 19  tgcgccttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcc 78

                                                                       
Query: 183 tgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtcttcatgtacagaggggac 242
           |||||||||||| |||||| ||||   ||||| |||||| ||||||||||||||||||||
Sbjct: 79  tgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggac 138

                                                                       
Query: 243 acgcccttctgcagcgaggagtgccgccacgagcagatgcggctcgacgccgcctgcgcc 302
           || |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| 
Sbjct: 139 acccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcg 198

                      
Query: 303 aggcaggccgc 313
           |||||||||||
Sbjct: 199 aggcaggccgc 209
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>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
              complete sequence
          Length = 145739

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/191 (90%)
 Strand = Plus / Minus

                                                                          
Query: 123    tgcgccttcttcttcgacgccgagccggtgggcgagccctgttagcacgcgctggacgcg 182
              ||||||||||||||||||||||||||||| |||||| || |   ||||||||||||||| 
Sbjct: 100919 tgcgccttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcc 100860

                                                                          
Query: 183    tgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtcttcatgtacagaggggac 242
              |||||||||||| |||||| ||||   ||||| |||||| ||||||||||||||||||||
Sbjct: 100859 tgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggac 100800

                                                                          
Query: 243    acgcccttctgcagcgaggagtgccgccacgagcagatgcggctcgacgccgcctgcgcc 302
              || |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| 
Sbjct: 100799 acccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcg 100740

                         
Query: 303    aggcaggccgc 313
              |||||||||||
Sbjct: 100739 aggcaggccgc 100729



 Score =  204 bits (103), Expect = 2e-49
 Identities = 169/191 (88%)
 Strand = Plus / Minus

                                                                         
Query: 102   accatggcggcatctgtggcctgcgccttcttcttcgacgccgagccggtgggcgagccc 161
             ||||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||  
Sbjct: 97385 accatggcggcgtctcttgcctgcgctttcttcttcgacgccgagccggtgggcgagcag 97326

                                                                         
Query: 162   tgttagcacgcgctggacgcgtgcgcgctctgcgccaagcggctggcgcgcgacagcgac 221
              |   ||||||||||||||| |||||||||||| |||||| |||  || | |||||||||
Sbjct: 97325 ggcaggcacgcgctggacgcctgcgcgctctgcaccaagcagctcacgagggacagcgac 97266

                                                                         
Query: 222   gtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacgagcagatg 281
              ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 97265 atcttcatgtacaagggggacacgcccttctgcagcgaggagtgccgctacgagcagatg 97206

                        
Query: 282   cggctcgacgc 292
             | |||||||||
Sbjct: 97205 cagctcgacgc 97195



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 233   cagaggggacacgcccttctgcagcgaggagtgccgccacgagcagat 280
             |||||| |||| |||||||||||||||||||||| | || ||||||||
Sbjct: 86623 cagaggtgacatgcccttctgcagcgaggagtgcaggcaggagcagat 86576



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 240   gacacgcccttctgcagcgaggagtgc 266
             |||||||| ||||||||||||||||||
Sbjct: 82689 gacacgccgttctgcagcgaggagtgc 82663
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/191 (90%)
 Strand = Plus / Minus

                                                                            
Query: 123      tgcgccttcttcttcgacgccgagccggtgggcgagccctgttagcacgcgctggacgcg 182
                ||||||||||||||||||||||||||||| |||||| || |   ||||||||||||||| 
Sbjct: 29598230 tgcgccttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcc 29598171

                                                                            
Query: 183      tgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtcttcatgtacagaggggac 242
                |||||||||||| |||||| ||||   ||||| |||||| ||||||||||||||||||||
Sbjct: 29598170 tgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggac 29598111

                                                                            
Query: 243      acgcccttctgcagcgaggagtgccgccacgagcagatgcggctcgacgccgcctgcgcc 302
                || |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| 
Sbjct: 29598110 acccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcg 29598051

                           
Query: 303      aggcaggccgc 313
                |||||||||||
Sbjct: 29598050 aggcaggccgc 29598040



 Score =  204 bits (103), Expect = 2e-49
 Identities = 169/191 (88%)
 Strand = Plus / Minus

                                                                            
Query: 102      accatggcggcatctgtggcctgcgccttcttcttcgacgccgagccggtgggcgagccc 161
                ||||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||  
Sbjct: 29594696 accatggcggcgtctcttgcctgcgctttcttcttcgacgccgagccggtgggcgagcag 29594637

                                                                            
Query: 162      tgttagcacgcgctggacgcgtgcgcgctctgcgccaagcggctggcgcgcgacagcgac 221
                 |   ||||||||||||||| |||||||||||| |||||| |||  || | |||||||||
Sbjct: 29594636 ggcaggcacgcgctggacgcctgcgcgctctgcaccaagcagctcacgagggacagcgac 29594577

                                                                            
Query: 222      gtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacgagcagatg 281
                 ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 29594576 atcttcatgtacaagggggacacgcccttctgcagcgaggagtgccgctacgagcagatg 29594517

                           
Query: 282      cggctcgacgc 292
                | |||||||||
Sbjct: 29594516 cagctcgacgc 29594506



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 233      cagaggggacacgcccttctgcagcgaggagtgccgccacgagcagat 280
                |||||| |||| |||||||||||||||||||||| | || ||||||||
Sbjct: 29583934 cagaggtgacatgcccttctgcagcgaggagtgcaggcaggagcagat 29583887



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 240      gacacgcccttctgcagcgaggagtgc 266
                |||||||| ||||||||||||||||||
Sbjct: 29580000 gacacgccgttctgcagcgaggagtgc 29579974
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>dbj|AK120315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L24, full
           insert sequence
          Length = 636

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 123 tgcgccttcttcttcgacgccgagccggtgggcgagccctgttagcacgcgctggacgcg 182
           ||||||||||||||||||||||||||||| |||||| || |   ||||||||||||||| 
Sbjct: 21  tgcgccttcttcttcgacgccgagccggtcggcgagaccgggcggcacgcgctggacgcc 80

                                                                       
Query: 183 tgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtcttcatgtacagaggggac 242
           |||||||||||| |||||| ||||   ||||| |||||| ||||||||||||||||||||
Sbjct: 81  tgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtacagaggggac 140

                                                                       
Query: 243 acgcccttctgcagcgaggagtgccgccacgagcagatgcggctcgacgccgcctgcgcc 302
           || |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| 
Sbjct: 141 acccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccgcctgcgcg 200

                      
Query: 303 aggcaggccgc 313
           |||||||||||
Sbjct: 201 aggcaggccgc 211
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>dbj|AK063206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D01, full
           insert sequence
          Length = 727

 Score =  204 bits (103), Expect = 2e-49
 Identities = 169/191 (88%)
 Strand = Plus / Plus

                                                                       
Query: 102 accatggcggcatctgtggcctgcgccttcttcttcgacgccgagccggtgggcgagccc 161
           ||||||||||| ||| | |||||||| |||||||||||||||||||||||||||||||  
Sbjct: 86  accatggcggcgtctcttgcctgcgctttcttcttcgacgccgagccggtgggcgagcag 145

                                                                       
Query: 162 tgttagcacgcgctggacgcgtgcgcgctctgcgccaagcggctggcgcgcgacagcgac 221
            |   ||||||||||||||| |||||||||||| |||||| |||  || | |||||||||
Sbjct: 146 ggcaggcacgcgctggacgcctgcgcgctctgcaccaagcagctcacgagggacagcgac 205

                                                                       
Query: 222 gtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacgagcagatg 281
            ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 206 atcttcatgtacaagggggacacgcccttctgcagcgaggagtgccgctacgagcagatg 265

                      
Query: 282 cggctcgacgc 292
           | |||||||||
Sbjct: 266 cagctcgacgc 276
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>ref|XM_473679.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 294

 Score =  198 bits (100), Expect = 1e-47
 Identities = 166/188 (88%)
 Strand = Plus / Plus

                                                                       
Query: 105 atggcggcatctgtggcctgcgccttcttcttcgacgccgagccggtgggcgagccctgt 164
           |||||||| ||| | |||||||| |||||||||||||||||||||||||||||||   | 
Sbjct: 1   atggcggcgtctcttgcctgcgctttcttcttcgacgccgagccggtgggcgagcagggc 60

                                                                       
Query: 165 tagcacgcgctggacgcgtgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtc 224
             ||||||||||||||| |||||||||||| |||||| |||  || | ||||||||| ||
Sbjct: 61  aggcacgcgctggacgcctgcgcgctctgcaccaagcagctcacgagggacagcgacatc 120

                                                                       
Query: 225 ttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacgagcagatgcgg 284
           ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 121 ttcatgtacaagggggacacgcccttctgcagcgaggagtgccgctacgagcagatgcag 180

                   
Query: 285 ctcgacgc 292
           ||||||||
Sbjct: 181 ctcgacgc 188
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>gb|AY109649.1| Zea mays CL122_1 mRNA sequence
          Length = 3177

 Score =  123 bits (62), Expect = 5e-25
 Identities = 121/139 (87%), Gaps = 5/139 (3%)
 Strand = Plus / Plus

                                                                        
Query: 118  tggcctgcgccttcttcttcgacgccgagccggtgggcgagccc----tgttagcacgcg 173
            |||||| ||||||||||||||||||||||||||   ||||||||    || | || | ||
Sbjct: 2601 tggcctccgccttcttcttcgacgccgagccggactgcgagcccagcctgct-gcccacg 2659

                                                                        
Query: 174  ctggacgcgtgcgcgctctgcgccaagcggctggcgcgcgacagcgacgtcttcatgtac 233
            |||||||| ||||||||||||||||||| |||||  |||||| ||||| |||||||||||
Sbjct: 2660 ctggacgcctgcgcgctctgcgccaagccgctgggacgcgactgcgacatcttcatgtac 2719

                               
Query: 234  agaggggacacgcccttct 252
            |||||||||||||||||||
Sbjct: 2720 agaggggacacgcccttct 2738
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>ref|XM_467200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1034

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
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>ref|XM_467198.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 770

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 374
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>dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-A08, full
           insert sequence
          Length = 770

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 374
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>dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077C02, full
           insert sequence
          Length = 1034

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
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>ref|XM_467202.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 972

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccg 268
           ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
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>dbj|AK059947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H10, full
           insert sequence
          Length = 972

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 217 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccg 268
           ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
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>ref|XM_473678.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 384

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacg 273
           |||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | || |
Sbjct: 206 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgcaggcagg 265

                  
Query: 274 agcagat 280
           |||||||
Sbjct: 266 agcagat 272
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>dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H12, full
           insert sequence
          Length = 1044

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccacg 273
           |||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | || |
Sbjct: 441 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgcaggcagg 500

                  
Query: 274 agcagat 280
           |||||||
Sbjct: 501 agcagat 507
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>ref|XM_467201.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 378

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 223 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           |||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 197 tcttcatgtacagaggcgacaccccgttctgcagcgaggagtgc 240
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>ref|XM_473677.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 339

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 223 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 101 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 144
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>dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072B01, full
           insert sequence
          Length = 768

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 223 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 38  tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 81
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>dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H07, full
           insert sequence
          Length = 872

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 223 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 259 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 302
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 233      cagaggggacacgcccttctgcagcgaggagtgc 266
                ||||||||||||||| ||||||||||||||||||
Sbjct: 28155440 cagaggggacacgccgttctgcagcgaggagtgc 28155407



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 233      cagaggggacacgcccttctgcagcgaggagtgc 266
                ||||||||||||||| ||||||||||||||||||
Sbjct: 28151680 cagaggggacacgccgttctgcagcgaggagtgc 28151647



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 232      acagaggggacacgcccttctgcagcgaggagtgccg 268
                |||||||| ||||||| ||||||||||||||||||||
Sbjct: 28172525 acagagggaacacgccattctgcagcgaggagtgccg 28172489



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 233      cagaggggacacgcccttctgcagcgaggagtgc 266
                |||||| ||||| || ||||||||||||||||||
Sbjct: 28162852 cagaggcgacaccccgttctgcagcgaggagtgc 28162819
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 233    cagaggggacacgcccttctgcagcgaggagtgc 266
              ||||||||||||||| ||||||||||||||||||
Sbjct: 145087 cagaggggacacgccgttctgcagcgaggagtgc 145054



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 233    cagaggggacacgcccttctgcagcgaggagtgc 266
              ||||||||||||||| ||||||||||||||||||
Sbjct: 141327 cagaggggacacgccgttctgcagcgaggagtgc 141294



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 232    acagaggggacacgcccttctgcagcgaggagtgccg 268
              |||||||| ||||||| ||||||||||||||||||||
Sbjct: 162172 acagagggaacacgccattctgcagcgaggagtgccg 162136



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 233    cagaggggacacgcccttctgcagcgaggagtgc 266
              |||||| ||||| || ||||||||||||||||||
Sbjct: 152499 cagaggcgacaccccgttctgcagcgaggagtgc 152466
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>ref|XM_473675.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 453

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 227 catgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||||||| |||||||  || ||||||||||||||||||
Sbjct: 261 catgtacaggggggacattccgttctgcagcgaggagtgc 300
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>dbj|AK061584.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B04, full
           insert sequence
          Length = 1079

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 227 catgtacagaggggacacgcccttctgcagcgaggagtgc 266
           ||||||||| |||||||  || ||||||||||||||||||
Sbjct: 460 catgtacaggggggacattccgttctgcagcgaggagtgc 499
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>dbj|AK071528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102E22, full
           insert sequence
          Length = 806

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 211 gcgacagcgacgtcttcatgtacagagggga 241
           ||||| ||||| |||||||||||||||||||
Sbjct: 367 gcgaccgcgacatcttcatgtacagagggga 397
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>dbj|AK059793.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E07, full
           insert sequence
          Length = 938

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 211 gcgacagcgacgtcttcatgtacagagggga 241
           ||||| ||||| |||||||||||||||||||
Sbjct: 372 gcgaccgcgacatcttcatgtacagagggga 402
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>gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, complete sequence
          Length = 1065

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 227 catgtacagaggggacacgcccttctgcagcgaggagtgccg 268
           |||||||||||| |||  | | ||||||||||||||||||||
Sbjct: 372 catgtacagaggcgaccgggcgttctgcagcgaggagtgccg 413
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 194     cgccaagcggctggcgcgcgacagcg 219
               |||||||||||||| |||||||||||
Sbjct: 3896555 cgccaagcggctggagcgcgacagcg 3896580
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>ref|XM_566179.1| Anopheles gambiae str. PEST ENSANGP00000028877
           (ENSANGG00000022270), partial mRNA
          Length = 1581

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 201 cggctggcgcgcgacagcgacg 222
           ||||||||||||||||||||||
Sbjct: 259 cggctggcgcgcgacagcgacg 280
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>gb|AC024908.22| Homo sapiens 10 BAC RP11-446F3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158349

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 2      ctaaacccacccacctctcctcctc 26
              |||||| ||||||||||||||||||
Sbjct: 129635 ctaaacacacccacctctcctcctc 129659
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>ref|NM_117875.2| Arabidopsis thaliana unknown protein AT4G17670 mRNA, complete cds
          Length = 824

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctg 253
           |||| ||| |||||||||||||||| ||||| || |||||
Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
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>ref|XM_470528.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 315 cggcggctgcagcggttcacggcg 338
           |||||||||||||||||| |||||
Sbjct: 338 cggcggctgcagcggttctcggcg 361
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>gb|BC006760.1| Mus musculus YKT6 homolog (S. Cerevisiae), mRNA (cDNA clone MGC:5770
            IMAGE:3257673), complete cds
          Length = 2438

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 2186 ccacccacctctcctcctcc 2167
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        ccacccacctctcctcctcc 27
                ||||||||||||||||||||
Sbjct: 34174393 ccacccacctctcctcctcc 34174374



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 315     cggcggctgcagcggttcacggcg 338
               |||||||||||||||||| |||||
Sbjct: 4128037 cggcggctgcagcggttctcggcg 4128060
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>ref|NM_019661.2| Mus musculus YKT6 homolog (S. Cerevisiae) (Ykt6), mRNA
          Length = 2438

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 2186 ccacccacctctcctcctcc 2167
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>ref|XM_843186.1| PREDICTED: Canis familiaris similar to cyclin M3 isoform 1
           (LOC481091), mRNA
          Length = 1668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 cgccgcctgcgccaggcagg 309
           ||||||||||||||||||||
Sbjct: 189 cgccgcctgcgccaggcagg 170
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>ref|XM_811649.1| Trypanosoma cruzi strain CL Brener translation initiation factor IF-2
            (Tc00.1047053511821.110) partial mRNA
          Length = 2337

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  tcacggcggaggcggagtgc 350
            ||||||||||||||||||||
Sbjct: 1841 tcacggcggaggcggagtgc 1860
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>ref|XM_813814.1| Trypanosoma cruzi strain CL Brener translation initiation factor IF-2
            (Tc00.1047053510533.120) partial mRNA
          Length = 2337

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  tcacggcggaggcggagtgc 350
            ||||||||||||||||||||
Sbjct: 1841 tcacggcggaggcggagtgc 1860
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>gb|AY117186.1| Arabidopsis thaliana unknown protein (At4g17670) mRNA, complete cds
          Length = 511

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctg 253
           |||| ||| |||||||||||||||| ||||| || |||||
Sbjct: 269 acagagacatcttcatgtacagaggagacacaccgttctg 308
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>gb|AY064001.1| Arabidopsis thaliana unknown protein (At4g17670) mRNA, complete cds
          Length = 840

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctg 253
           |||| ||| |||||||||||||||| ||||| || |||||
Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cgccgagccggtgggcgagc 159
              ||||||||||||||||||||
Sbjct: 183290 cgccgagccggtgggcgagc 183309
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    gccaccgtgggcagcggcag 368
              ||||||||||||||||||||
Sbjct: 114930 gccaccgtgggcagcggcag 114911
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>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the
             Mylc2a gene for myosin light chain, regulatory A, the Gck
             gene for glucokinase, a novel gene, the gene for
             prenylated SNARE protein (Ykt6), the Camk2d gene for
             calcium/calmodulin-dependent protein kinase II delta and
             two CpG islands, complete sequence
          Length = 172356

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ccacccacctctcctcctcc 27
             ||||||||||||||||||||
Sbjct: 79527 ccacccacctctcctcctcc 79508
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    acagcgacgtcttcatgtac 233
              ||||||||||||||||||||
Sbjct: 207224 acagcgacgtcttcatgtac 207205
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>dbj|AK147098.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I920165L16
            product:1810013M05Rik protein (0610042I15Rik protein)
            (Prenylated SNARE protein), full insert sequence
          Length = 2434

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 2220 ccacccacctctcctcctcc 2201
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>dbj|AK159253.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420013C15 product:1810013M05Rik protein
            (0610042I15Rik protein) (Prenylated SNARE protein), full
            insert sequence
          Length = 2421

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 2207 ccacccacctctcctcctcc 2188
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>dbj|AK150472.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830008C23 product:1810013M05Rik protein
            (0610042I15Rik protein) (Prenylated SNARE protein), full
            insert sequence
          Length = 2431

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 2217 ccacccacctctcctcctcc 2198
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>dbj|AK088286.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430010E16
            product:inferred: prenylated SNARE protein / prenylated
            SNARE protein Ykt6, full insert sequence
          Length = 1531

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ccacccacctctcctcctcc 27
            ||||||||||||||||||||
Sbjct: 1318 ccacccacctctcctcctcc 1299
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 249      ttctgcagcgaggagtgccg 268
                ||||||||||||||||||||
Sbjct: 22027594 ttctgcagcgaggagtgccg 22027613
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        ccacccacctctcctcctcc 27
                ||||||||||||||||||||
Sbjct: 34264865 ccacccacctctcctcctcc 34264846



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 315     cggcggctgcagcggttcacggcg 338
               |||||||||||||||||| |||||
Sbjct: 4128146 cggcggctgcagcggttctcggcg 4128169
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>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence
          Length = 156728

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ccatggcggcatctgtggcc 122
             ||||||||||||||||||||
Sbjct: 49776 ccatggcggcatctgtggcc 49795
to top
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
              sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ccacccacctctcctcctcc 27
              ||||||||||||||||||||
Sbjct: 138205 ccacccacctctcctcctcc 138186
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     cgccgagccggtgggcgagc 159
               ||||||||||||||||||||
Sbjct: 6512074 cgccgagccggtgggcgagc 6512055
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>gb|AY088445.1| Arabidopsis thaliana clone 6709 mRNA, complete sequence
          Length = 822

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 214 acagcgacgtcttcatgtacagaggggacacgcccttctg 253
           |||| ||| |||||||||||||||| ||||| || |||||
Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
to top
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 315   cggcggctgcagcggttcacggcg 338
             |||||||||||||||||| |||||
Sbjct: 28674 cggcggctgcagcggttctcggcg 28697
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 194     cgccaagcggctggcgcgcg 213
               ||||||||||||||||||||
Sbjct: 6774004 cgccaagcggctggcgcgcg 6774023
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     gccaccgtgggcagcggcag 368
               ||||||||||||||||||||
Sbjct: 2330219 gccaccgtgggcagcggcag 2330200
to top
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    ttctgcagcgaggagtgccg 268
              ||||||||||||||||||||
Sbjct: 113343 ttctgcagcgaggagtgccg 113362
to top
>dbj|AK099407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C06, full
           insert sequence
          Length = 1050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 43/48 (89%), Gaps = 2/48 (4%)
 Strand = Plus / Plus

                                                           
Query: 223 tcttcatgtacagagggga-cacgcccttctgcagcgaggagtgccgc 269
           ||||||||||||||||||| | || |||||||||||  ||||||||||
Sbjct: 516 tcttcatgtacagaggggagcgcg-ccttctgcagcatggagtgccgc 562
to top
>dbj|AK071722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109I18, full
           insert sequence
          Length = 2357

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   ccacccacctctcctcctcc 27
           ||||||||||||||||||||
Sbjct: 93  ccacccacctctcctcctcc 112
to top
>dbj|AK063688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F05, full
           insert sequence
          Length = 529

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 315 cggcggctgcagcggttcacggcg 338
           |||||||||||||||||| |||||
Sbjct: 281 cggcggctgcagcggttctcggcg 258
to top
>gb|AY107714.1| Zea mays PCO121192 mRNA sequence
          Length = 742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 ttctgcagcgaggagtgccg 268
           ||||||||||||||||||||
Sbjct: 337 ttctgcagcgaggagtgccg 356
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     ctcgacgccgcctgcgccag 304
               ||||||||||||||||||||
Sbjct: 1675535 ctcgacgccgcctgcgccag 1675516
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>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence
          Length = 249808

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ccatggcggcatctgtggcc 122
             ||||||||||||||||||||
Sbjct: 31957 ccatggcggcatctgtggcc 31938
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     tcgacgccgagccggtgggc 155
               ||||||||||||||||||||
Sbjct: 2302083 tcgacgccgagccggtgggc 2302064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,775,941
Number of Sequences: 3902068
Number of extensions: 2775941
Number of successful extensions: 62062
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61025
Number of HSP's gapped (non-prelim): 1033
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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