ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast65f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (... 28 5.9
2ZP3_MESAU (P23491) Zona pellucida sperm-binding protein 3 precur... 28 7.7

>DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
           (G3-ADH subunit I)
          Length = 757

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -2

Query: 241 AVPVPRADE*TRRRSTGMTTADGGGIGSQWYGMGRS 134
           AVPV  A E T    T +T++D GG    W   GRS
Sbjct: 28  AVPVAFAQEDT---GTAITSSDNGGHPGDWLSYGRS 60



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>ZP3_MESAU (P23491) Zona pellucida sperm-binding protein 3 precursor (Zona|
           pellucida glycoprotein ZP3) (Sperm receptor) (Zona
           pellucida protein C)
          Length = 422

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 277 GSHPPHLLLSDRAVPVPRADE 215
           GSH P LL  DR VP P  D+
Sbjct: 204 GSHLPLLLFVDRCVPTPSPDQ 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,421,696
Number of Sequences: 219361
Number of extensions: 501164
Number of successful extensions: 1198
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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