ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65e10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2645 Score = 420 bits (212), Expect = e-114 Identities = 386/444 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 1159 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 1218 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1219 cagtatactcgctctgttcttgtgatacacaacattgctcatcagggtcgtggccctgta 1278 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||||||| || |||||||||||| |||||||||||||| || |||| |||||| ||| Sbjct: 1279 gatgacttcgccacgatggacttgcccgagcactacatcgatcatttcagactgtacgac 1338 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | || ||||||| |||||||||||| ||||||||||||||||| ||||| | | Sbjct: 1339 cccgtcggcggtgagcacagcaacgtgttcgccgctggcctgaagatggctgaccgcgcg 1398 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 |||||||||||||||||||| |||||||| | ||||| ||||| || |||||||||||| Sbjct: 1399 gtcaccgtcagccatggctatctgtgggagatcaagacaatggacggtggctggggcctc 1458 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || || ||||||||||| ||||||||||||||| | |||||||||||||||||||||| Sbjct: 1459 cacgagataataaaccacaacgactggaagctgcagggcatcgtgaacggcatcgacatg 1518 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||| |||||||||| ||| || | ||||||||| ||||||| |||| |||||||||| Sbjct: 1519 gccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgccaactacacg 1578 Query: 421 cgagacacgttggacaccggcaag 444 || ||| |||||||||||||| Sbjct: 1579 ttcgagacgctggacaccggcaag 1602
>dbj|AK066446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C10, full insert sequence Length = 2645 Score = 420 bits (212), Expect = e-114 Identities = 386/444 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 1159 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 1218 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1219 cagtatactcgctctgttcttgtgatacacaacattgctcatcagggtcgtggccctgta 1278 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||||||| || |||||||||||| |||||||||||||| || |||| |||||| ||| Sbjct: 1279 gatgacttcgccacgatggacttgcccgagcactacatcgatcatttcagactgtacgac 1338 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | || ||||||| |||||||||||| ||||||||||||||||| ||||| | | Sbjct: 1339 cccgtcggcggtgagcacagcaacgtgttcgccgctggcctgaagatggctgaccgcgcg 1398 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 |||||||||||||||||||| |||||||| | ||||| ||||| || |||||||||||| Sbjct: 1399 gtcaccgtcagccatggctatctgtgggagatcaagacaatggacggtggctggggcctc 1458 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || || ||||||||||| ||||||||||||||| | |||||||||||||||||||||| Sbjct: 1459 cacgagataataaaccacaacgactggaagctgcagggcatcgtgaacggcatcgacatg 1518 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||| |||||||||| ||| || | ||||||||| ||||||| |||| |||||||||| Sbjct: 1519 gccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgccaactacacg 1578 Query: 421 cgagacacgttggacaccggcaag 444 || ||| |||||||||||||| Sbjct: 1579 ttcgagacgctggacaccggcaag 1602
>dbj|AK061803.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H12, full insert sequence Length = 1609 Score = 420 bits (212), Expect = e-114 Identities = 386/444 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 182 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 241 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 242 cagtatactcgctctgttcttgtgatacacaacattgctcatcagggtcgtggccctgta 301 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||||||| || |||||||||||| |||||||||||||| || |||| |||||| ||| Sbjct: 302 gatgacttcgccacgatggacttgcccgagcactacatcgatcatttcagactgtacgac 361 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | || ||||||| |||||||||||| ||||||||||||||||| ||||| | | Sbjct: 362 cccgtcggcggtgagcacagcaacgtgttcgccgctggcctgaagatggctgaccgcgcg 421 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 |||||||||||||||||||| |||||||| | ||||| ||||| || |||||||||||| Sbjct: 422 gtcaccgtcagccatggctatctgtgggagatcaagacaatggacggtggctggggcctc 481 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || || ||||||||||| ||||||||||||||| | |||||||||||||||||||||| Sbjct: 482 cacgagataataaaccacaacgactggaagctgcagggcatcgtgaacggcatcgacatg 541 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||| |||||||||| ||| || | ||||||||| ||||||| |||| |||||||||| Sbjct: 542 gccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgccaactacacg 601 Query: 421 cgagacacgttggacaccggcaag 444 || ||| |||||||||||||| Sbjct: 602 ttcgagacgctggacaccggcaag 625
>emb|AJ308110.1|OSA308110 Oryza sativa mRNA for soluble starch synthase 2 (ss2 gene) Length = 2319 Score = 412 bits (208), Expect = e-112 Identities = 385/444 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 853 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 912 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 913 cagtatactcgctctgttcttgtgatacacaacattgctcatcagggtcgtggccctgta 972 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||||||| || |||||||||||| |||||||||||||| || |||| |||||| ||| Sbjct: 973 gatgacttcgccacgatggacttgcccgagcactacatcgatcatttcagactgtacgac 1032 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | || ||||||| |||||||||||| ||||||||||||||||| ||||| | | Sbjct: 1033 cccgtcggcggtgagcacagcaacgtgttcgccgctggcctgaagatggctgaccgcgcg 1092 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 |||||||||||||||||||| |||||||| | ||||| ||||| || |||||||||||| Sbjct: 1093 gtcaccgtcagccatggctatctgtgggagatcaagacaatggacggtggctggggcctc 1152 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || || ||||||||||| ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 1153 cacgagataataaaccacaacgactggaagctgcagggcatcgtgaatggcatcgacatg 1212 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||| |||||||||| ||| || | ||||||||| ||||||| |||| |||||||||| Sbjct: 1213 gccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgccaactacacg 1272 Query: 421 cgagacacgttggacaccggcaag 444 || ||| |||||||||||||| Sbjct: 1273 ttcgagacgctggacaccggcaag 1296
>gb|AF395537.1|AF395537 Oryza sativa soluble starch synthase II-2 mRNA, complete cds Length = 2394 Score = 396 bits (200), Expect = e-107 Identities = 383/444 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || | | ||||||| |||||||||||||| ||| ||||| Sbjct: 1057 tggcatactgcacttttacccgtatgtttgaaggcatattaccgagataatggcttgatg 1116 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||||||||| |||||||| ||||| || ||||||||||||||||| || ||||||||| Sbjct: 1117 cagtatactcgctctgttcttgtgatacacaacattgctcatcagggtcgcggccctgta 1176 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||||||| || |||||||||||| |||||||||||||| || |||| |||||| ||| Sbjct: 1177 gatgacttcgccacgatggacttgcccgagcactacatcgatcatttcagactgtacgac 1236 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | || ||||||| |||||||||||| ||||||||||||||||| ||||| | | Sbjct: 1237 cccgtcggcggtgagcacagcaacgtgttcgccgctggcctgaagatggctgaccgcgcg 1296 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 |||||||||||||||||||| |||||||| | ||||| ||||| || |||||||||||| Sbjct: 1297 gtcaccgtcagccatggctatctgtgggagatcaagacaatggacggtggctggggcctc 1356 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || || ||||||||||| ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 1357 cacgagataataaaccacaacgactggaagctgcagggcatcgtgaatggcatcgacatg 1416 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||| |||||||||| ||| || | ||||||||| ||||||| |||| |||||||||| Sbjct: 1417 gccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgccaactacacg 1476 Query: 421 cgagacacgttggacaccggcaag 444 || ||| |||||||||||||| Sbjct: 1477 ttcgagacgctggacaccggcaag 1500
>gb|AF019297.1|AF019297 Zea mays starch synthase isoform zSTSII-2 (zSSIIb) mRNA, complete cds Length = 2480 Score = 396 bits (200), Expect = e-107 Identities = 386/448 (86%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 |||||||| |||||||| ||||| ||||| ||||| |||||||| || || || ||||| Sbjct: 1093 tggcataccgcacttctgcctgtctatctaaaggcctattaccgggacaatggtttgatg 1152 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 |||||| |||| ||||| || ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1153 cagtatgctcgctctgtgcttgtgatacacaacattgctcatcagggtcgtggccctgta 1212 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 || |||||| || | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1213 gacgacttcgtcaattttgacttgcctgaacactacatcgaccacttcaaactgtatgac 1272 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 | || |||| || |||| |||||| || ||||| || ||||||| ||||||||||||| Sbjct: 1273 aacattggtggggatcacagcaacgtttttgctgcggggctgaagacggcagaccgggtg 1332 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1333 gtgaccgttagcaatggctacatgtgggagctgaagacttcggaaggcgggtggggcctc 1392 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || ||||| |||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1393 cacgacatcataaaccagaacgactggaagctgcagggcatcgtgaacggcatcgacatg 1452 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 ||||||||||||||| || || |||||||| |||||||||||||||||||||||||| Sbjct: 1453 agcgagtggaaccccgctgtggacgtgcacctccactccgacgactacaccaactacacg 1512 Query: 421 cgagacacgttggacaccggcaagcggc 448 || ||| |||||||||||||||||| Sbjct: 1513 ttcgagacgctggacaccggcaagcggc 1540
>gb|AY109714.1| Zea mays CL171_2 mRNA sequence Length = 2498 Score = 345 bits (174), Expect = 8e-92 Identities = 382/453 (84%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 |||||||| |||||||| ||||| ||||| ||||| |||||||| || || || ||||| Sbjct: 1093 tggcataccgcacttctgcctgtctatctaaaggcctattaccgggacaatggtttgatg 1152 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 |||||| |||| ||||| || ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1153 cagtatgctcgctctgtgcttgtgatacacaacattgctcatcagggtcgtggccctgta 1212 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 || |||||| || | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1213 gacgacttcgtcaattttgacttgcctgaacactacatcgaccacttcaaactgtatgac 1272 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 | || |||| || |||| ||||| ||||| || ||||||| ||||||||||||| Sbjct: 1273 aacattggtggggatcacagcaacgnnnnngctgcggggctgaagacggcagaccgggtg 1332 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1333 gtgaccgttagcaatggctacatgtgggagctgaagacttcggaaggcgggtggggcctc 1392 Query: 301 catgacataataaaccagaacgact-----ggaagctggatggcatcgtgaacggcatcg 355 || ||||| ||||||||| |||||| |||||||| | ||||||||||||||||||| Sbjct: 1393 cacgacatcataaaccagcacgactattgcggaagctgcagggcatcgtgaacggcatcg 1452 Query: 356 acacagccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaact 415 ||| ||||||||||||||| || || |||||||| |||||||||||||||||||||| Sbjct: 1453 acatgagcgagtggaaccccgctgtggacgtgcacctccactccgacgactacaccaact 1512 Query: 416 acacccgagacacgttggacaccggcaagcggc 448 |||| || ||| |||||||||||||||||| Sbjct: 1513 acacgttcgagacgctggacaccggcaagcggc 1545
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 307 bits (155), Expect = 2e-80 Identities = 296/343 (86%) Strand = Plus / Minus Query: 102 tcagggacgtggccctgtagatgacttcaacatgatggacttgcctgagcactacatcga 161 |||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||| Sbjct: 31253170 tcagggtcgtggccctgtagatgacttcgccacgatggacttgcccgagcactacatcga 31253111 Query: 162 ccacttcaaactgtatgaccccctttgtggcgagcacaacaacgtgttcgctgctggcct 221 || |||| |||||| |||||| | | || ||||||| |||||||||||| |||||||| Sbjct: 31253110 tcatttcagactgtacgaccccgtcggcggtgagcacagcaacgtgttcgccgctggcct 31253051 Query: 222 gaagatggcagaccgggtggtcaccgtcagccatggctacatgtgggagctgaagacgat 281 ||||||||| ||||| | ||||||||||||||||||||| |||||||| | ||||| || Sbjct: 31253050 gaagatggctgaccgcgcggtcaccgtcagccatggctatctgtgggagatcaagacaat 31252991 Query: 282 ggaaggcggctggggcctccatgacataataaaccagaacgactggaagctggatggcat 341 ||| || |||||||||||||| || ||||||||||| ||||||||||||||| | ||||| Sbjct: 31252990 ggacggtggctggggcctccacgagataataaaccacaacgactggaagctgcagggcat 31252931 Query: 342 cgtgaacggcatcgacacagccgagtggaaccccgcggtcgatgtgcacctgcactccga 401 ||||||||||||||||| ||||| |||||||||| ||| || | ||||||||| ||||| Sbjct: 31252930 cgtgaacggcatcgacatggccgaatggaaccccgaggtggacgagcacctgcagtccga 31252871 Query: 402 cgactacaccaactacacccgagacacgttggacaccggcaag 444 || |||| |||||||||| || ||| |||||||||||||| Sbjct: 31252870 cggctacgccaactacacgttcgagacgctggacaccggcaag 31252828 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 31253771 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 31253712 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagg 106 ||||||||||| |||||||| ||||| || |||||||||||||||| Sbjct: 31253711 cagtatactcgctctgttcttgtgatacacaacattgctcatcagg 31253666
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 307 bits (155), Expect = 2e-80 Identities = 296/343 (86%) Strand = Plus / Minus Query: 102 tcagggacgtggccctgtagatgacttcaacatgatggacttgcctgagcactacatcga 161 |||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||| Sbjct: 133013 tcagggtcgtggccctgtagatgacttcgccacgatggacttgcccgagcactacatcga 132954 Query: 162 ccacttcaaactgtatgaccccctttgtggcgagcacaacaacgtgttcgctgctggcct 221 || |||| |||||| |||||| | | || ||||||| |||||||||||| |||||||| Sbjct: 132953 tcatttcagactgtacgaccccgtcggcggtgagcacagcaacgtgttcgccgctggcct 132894 Query: 222 gaagatggcagaccgggtggtcaccgtcagccatggctacatgtgggagctgaagacgat 281 ||||||||| ||||| | ||||||||||||||||||||| |||||||| | ||||| || Sbjct: 132893 gaagatggctgaccgcgcggtcaccgtcagccatggctatctgtgggagatcaagacaat 132834 Query: 282 ggaaggcggctggggcctccatgacataataaaccagaacgactggaagctggatggcat 341 ||| || |||||||||||||| || ||||||||||| ||||||||||||||| | ||||| Sbjct: 132833 ggacggtggctggggcctccacgagataataaaccacaacgactggaagctgcagggcat 132774 Query: 342 cgtgaacggcatcgacacagccgagtggaaccccgcggtcgatgtgcacctgcactccga 401 ||||||||||||||||| ||||| |||||||||| ||| || | ||||||||| ||||| Sbjct: 132773 cgtgaacggcatcgacatggccgaatggaaccccgaggtggacgagcacctgcagtccga 132714 Query: 402 cgactacaccaactacacccgagacacgttggacaccggcaag 444 || |||| |||||||||| || ||| |||||||||||||| Sbjct: 132713 cggctacgccaactacacgttcgagacgctggacaccggcaag 132671 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 133614 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 133555 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagg 106 ||||||||||| |||||||| ||||| || |||||||||||||||| Sbjct: 133554 cagtatactcgctctgttcttgtgatacacaacattgctcatcagg 133509
>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1118_G04 Length = 134464 Score = 307 bits (155), Expect = 2e-80 Identities = 296/343 (86%) Strand = Plus / Minus Query: 102 tcagggacgtggccctgtagatgacttcaacatgatggacttgcctgagcactacatcga 161 |||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||| Sbjct: 23038 tcagggtcgtggccctgtagatgacttcgccacgatggacttgcccgagcactacatcga 22979 Query: 162 ccacttcaaactgtatgaccccctttgtggcgagcacaacaacgtgttcgctgctggcct 221 || |||| |||||| |||||| | | || ||||||| |||||||||||| |||||||| Sbjct: 22978 tcatttcagactgtacgaccccgtcggcggtgagcacagcaacgtgttcgccgctggcct 22919 Query: 222 gaagatggcagaccgggtggtcaccgtcagccatggctacatgtgggagctgaagacgat 281 ||||||||| ||||| | ||||||||||||||||||||| |||||||| | ||||| || Sbjct: 22918 gaagatggctgaccgcgcggtcaccgtcagccatggctatctgtgggagatcaagacaat 22859 Query: 282 ggaaggcggctggggcctccatgacataataaaccagaacgactggaagctggatggcat 341 ||| || |||||||||||||| || ||||||||||| ||||||||||||||| | ||||| Sbjct: 22858 ggacggtggctggggcctccacgagataataaaccacaacgactggaagctgcagggcat 22799 Query: 342 cgtgaacggcatcgacacagccgagtggaaccccgcggtcgatgtgcacctgcactccga 401 ||||||||||||||||| ||||| |||||||||| ||| || | ||||||||| ||||| Sbjct: 22798 cgtgaacggcatcgacatggccgaatggaaccccgaggtggacgagcacctgcagtccga 22739 Query: 402 cgactacaccaactacacccgagacacgttggacaccggcaag 444 || |||| |||||||||| || ||| |||||||||||||| Sbjct: 22738 cggctacgccaactacacgttcgagacgctggacaccggcaag 22696 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||| ||||| Sbjct: 23639 tggcatactgcacttttacccgtatatttgaaggcatattaccgagataatggcttgatg 23580 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagg 106 ||||||||||| |||||||| ||||| || |||||||||||||||| Sbjct: 23579 cagtatactcgctctgttcttgtgatacacaacattgctcatcagg 23534
>gb|AF419099.1|AF419099 Oryza sativa putative soluble starch synthase II-3 mRNA, complete cds Length = 2959 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1575 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1634 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1635 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1694 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1695 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1754 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1755 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1814 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1815 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1874 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1875 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1934 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1935 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1993 Query: 420 c 420 | Sbjct: 1994 c 1994
>dbj|AB115918.1| Oryza sativa (indica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Kasalath Length = 2433 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1372 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1431 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1432 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1491 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1492 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1551 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1552 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1611 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1612 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1671 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1672 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1731 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1732 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1790 Query: 420 c 420 | Sbjct: 1791 c 1791
>dbj|AB115917.1| Oryza sativa (indica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:IR36 Length = 2433 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1372 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1431 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1432 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1491 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1492 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1551 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1552 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1611 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1612 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1671 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1672 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1731 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1732 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1790 Query: 420 c 420 | Sbjct: 1791 c 1791
>dbj|AB115916.1| Oryza sativa (japonica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Kinmaze Length = 2433 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1372 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1431 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1432 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1491 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1492 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1551 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1552 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1611 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1612 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1671 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1672 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1731 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1732 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1790 Query: 420 c 420 | Sbjct: 1791 c 1791
>dbj|AB115915.1| Oryza sativa (japonica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Nipponbare Length = 2447 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1386 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1445 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1446 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1505 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1506 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1565 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1566 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1625 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1626 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1685 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1686 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1745 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1746 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1804 Query: 420 c 420 | Sbjct: 1805 c 1805
>dbj|AK101978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P09, full insert sequence Length = 2919 Score = 248 bits (125), Expect = 1e-62 Identities = 349/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 1536 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 1595 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| ||||| || ||||| ||||| || ||| | ||||| |||||||| ||| Sbjct: 1596 cagtacactcgctctgtccttgtgatacataatatcgcttaccagggccgtggcccagta 1655 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| | ||||| ||||| ||||||||| | || |||||||| ||||| ||| Sbjct: 1656 gatgaattcccctacatggaattgccggagcactacctggatcacttcaagctgtacgac 1715 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | | ||||||||| |||| | |||| || |||||||||||||| ||||||||| Sbjct: 1716 cccgtcggcggcgagcacgccaacatcttcggcgcgggcctgaagatggcggaccgggtg 1775 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || ||||| |||| |||||| | |||||||||||||||| ||| ||||||||||||||| Sbjct: 1776 gtgaccgtgagccccggctacctctgggagctgaagacgacggagggcggctggggcctc 1835 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgac-ac 359 || ||||| ||| |||||||||||||| || | ||||||||||||||||||||| || Sbjct: 1836 cacgacatcatacgggagaacgactggaagatgaacggcatcgtgaacggcatcgactac 1895 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactacac 419 | ||||||||||| | ||| || ||||||||||| ||||||| |||| |||||||||| Sbjct: 1896 cg-ggagtggaacccggaggtggacgtgcacctgcagtccgacggctacgccaactacac 1954 Query: 420 c 420 | Sbjct: 1955 c 1955
>gb|AY423717.1| Oryza sativa (indica cultivar-group) soluble starch synthase II (ALK) gene, complete cds Length = 4422 Score = 178 bits (90), Expect = 1e-41 Identities = 239/286 (83%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 136 atggacttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgag 195 ||||| ||||| ||||||||| | || |||||||| ||||| |||||| | | |||||| Sbjct: 3496 atggaattgccggagcactacctggatcacttcaagctgtacgaccccgtcggcggcgag 3555 Query: 196 cacaacaacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccat 255 ||| |||| | |||| || |||||||||||||| ||||||||||| ||||| |||| Sbjct: 3556 cacgccaacatcttcggcgcgggcctgaagatggcggaccgggtggtgaccgtgagcccc 3615 Query: 256 ggctacatgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaac 315 |||||| | |||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 3616 ggctacctctgggagctgaagacgacggagggcggctggggcctccacgacatcatacgg 3675 Query: 316 cagaacgactggaagctggatggcatcgtgaacggcatcgac-acagccgagtggaaccc 374 |||||||||||||| || | ||||||||||||||||||||| || | ||||||||||| Sbjct: 3676 gagaacgactggaagatgaacggcatcgtgaacggcatcgactaccg-ggagtggaaccc 3734 Query: 375 cgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 | ||| || ||||||||||| ||||||| |||| ||||||||||| Sbjct: 3735 ggaggtggacgtgcacctgcagtccgacggctacgccaactacacc 3780 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 2893 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 2952 Query: 61 cagtatactcgttctgttctcgtgatccataa 92 ||||| ||||| ||||| || ||||| ||||| Sbjct: 2953 cagtacactcgctctgtccttgtgatacataa 2984
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 1e-41 Identities = 239/286 (83%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 136 atggacttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgag 195 ||||| ||||| ||||||||| | || |||||||| ||||| |||||| | | |||||| Sbjct: 6762871 atggaattgccggagcactacctggatcacttcaagctgtacgaccccgtcggcggcgag 6762930 Query: 196 cacaacaacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccat 255 ||| |||| | |||| || |||||||||||||| ||||||||||| ||||| |||| Sbjct: 6762931 cacgccaacatcttcggcgcgggcctgaagatggcggaccgggtggtgaccgtgagcccc 6762990 Query: 256 ggctacatgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaac 315 |||||| | |||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 6762991 ggctacctctgggagctgaagacgacggagggcggctggggcctccacgacatcatacgg 6763050 Query: 316 cagaacgactggaagctggatggcatcgtgaacggcatcgac-acagccgagtggaaccc 374 |||||||||||||| || | ||||||||||||||||||||| || | ||||||||||| Sbjct: 6763051 gagaacgactggaagatgaacggcatcgtgaacggcatcgactaccg-ggagtggaaccc 6763109 Query: 375 cgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 | ||| || ||||||||||| ||||||| |||| ||||||||||| Sbjct: 6763110 ggaggtggacgtgcacctgcagtccgacggctacgccaactacacc 6763155 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 6762269 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 6762328 Query: 61 cagtatactcgttctgttctcgtgatccataa 92 ||||| ||||| ||||| || ||||| ||||| Sbjct: 6762329 cagtacactcgctctgtccttgtgatacataa 6762360
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 178 bits (90), Expect = 1e-41 Identities = 239/286 (83%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 136 atggacttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgag 195 ||||| ||||| ||||||||| | || |||||||| ||||| |||||| | | |||||| Sbjct: 92550 atggaattgccggagcactacctggatcacttcaagctgtacgaccccgtcggcggcgag 92609 Query: 196 cacaacaacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccat 255 ||| |||| | |||| || |||||||||||||| ||||||||||| ||||| |||| Sbjct: 92610 cacgccaacatcttcggcgcgggcctgaagatggcggaccgggtggtgaccgtgagcccc 92669 Query: 256 ggctacatgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaac 315 |||||| | |||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 92670 ggctacctctgggagctgaagacgacggagggcggctggggcctccacgacatcatacgg 92729 Query: 316 cagaacgactggaagctggatggcatcgtgaacggcatcgac-acagccgagtggaaccc 374 |||||||||||||| || | ||||||||||||||||||||| || | ||||||||||| Sbjct: 92730 gagaacgactggaagatgaacggcatcgtgaacggcatcgactaccg-ggagtggaaccc 92788 Query: 375 cgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 | ||| || ||||||||||| ||||||| |||| ||||||||||| Sbjct: 92789 ggaggtggacgtgcacctgcagtccgacggctacgccaactacacc 92834 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| || ||| ||||| Sbjct: 91948 tggcacactgcactcctgcctgtttatctgaaggcatattacagagacaatggcatgatg 92007 Query: 61 cagtatactcgttctgttctcgtgatccataa 92 ||||| ||||| ||||| || ||||| ||||| Sbjct: 92008 cagtacactcgctctgtccttgtgatacataa 92039
>dbj|AK106045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E05, full insert sequence Length = 1291 Score = 178 bits (90), Expect = 1e-41 Identities = 239/286 (83%), Gaps = 2/286 (0%) Strand = Plus / Minus Query: 136 atggacttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgag 195 ||||| ||||| ||||||||| | || |||||||| ||||| |||||| | | |||||| Sbjct: 1176 atggaattgccggagcactacctggatcacttcaagctgtacgaccccgtcggcggcgag 1117 Query: 196 cacaacaacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccat 255 ||| |||| | |||| || |||||||||||||| ||||||||||| ||||| |||| Sbjct: 1116 cacgccaacatcttcggcgcgggcctgaagatggcggaccgggtggtgaccgtgagcccc 1057 Query: 256 ggctacatgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaac 315 |||||| | |||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 1056 ggctacctctgggagctgaagacgacggagggcggctggggcctccacgacatcatacgg 997 Query: 316 cagaacgactggaagctggatggcatcgtgaacggcatcgac-acagccgagtggaaccc 374 |||||||||||||| || | ||||||||||||||||||||| || | ||||||||||| Sbjct: 996 gagaacgactggaagatgaacggcatcgtgaacggcatcgactaccg-ggagtggaaccc 938 Query: 375 cgcggtcgatgtgcacctgcactccgacgactacaccaactacacc 420 | ||| || ||||||||||| ||||||| |||| ||||||||||| Sbjct: 937 ggaggtggacgtgcacctgcagtccgacggctacgccaactacacc 892
>gb|BT016370.1| Zea mays clone Contig203 mRNA sequence Length = 1378 Score = 176 bits (89), Expect = 4e-41 Identities = 335/417 (80%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| | || | ||| Sbjct: 12 tggcacactgcactcctgcctgtttatctgaaggcatattacagagaccatgggttaatg 71 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| || || ||||| || |||||||| || || ||||| ||||| |||||| Sbjct: 72 cagtacactcgctccgtcctcgtcatacataacatcgcccaccagggccgtggtcctgta 131 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| |||||||||||||| |||||| | | || ||| | ||||| || Sbjct: 132 gatgaattcccgtacatggacttgcctgaacactaccttcagcatttcgagctgtacgat 191 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | ||||||||||| |||| | || || || || ||||||||||||||||||||| Sbjct: 192 cccgtgggtggcgagcacgccaacatctttgccgcgggtctgaagatggcagaccgggtg 251 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || || ||||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 252 gtgactgtcagccgcggctacctgtgggagctgaagacagtggaaggcggctggggcctc 311 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || ||||| || |||||||||||| | ||||||||||||||||||||||| Sbjct: 312 cacgacatcatccgttctaacgactggaagatcaatggcatcgtgaacggcatcgaccac 371 Query: 361 gccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactac 417 | |||||||||||| ||| || |||||||||| || |||| ||||||||||||| Sbjct: 372 gaggagtggaaccccaaggtggacgtgcacctgcggtcggacggctacaccaactac 428
>gb|AY111778.1| Zea mays CL171_1 mRNA sequence Length = 3248 Score = 170 bits (86), Expect = 2e-39 Identities = 337/418 (80%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| | || | ||| Sbjct: 1800 tggcacactgcactcctgcctgtttatctgaaggcatattacagagaccatgggttaatg 1859 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| || || ||||| || |||||||| || || ||||| ||||| |||||| Sbjct: 1860 cagtacactcgctccgtcctcgtcatacataacatcgcccaccagggccgtggtcctgta 1919 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| |||||||||||||| |||||| | | || ||| | ||||| || Sbjct: 1920 gatgaattcccgtacatggacttgcctgaacactaccttcaacatttcgagctgtacgat 1979 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | ||||||||||| |||| | || || || || ||||||||||||||||||||| Sbjct: 1980 cccgtcggtggcgagcacgccaacatctttgccgcgggtctgaagatggcagaccgggtg 2039 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || || ||||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 2040 gtgactgtcagccgcggctacctgtgggagctgaagacagtggaaggcggctggggcctc 2099 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || ||||| || |||||||||||| | ||||||||||||||||||||||| || Sbjct: 2100 cacgacatcatccgttctaacgactggaagatcaatggcatcgtgaacggcatcgac-ca 2158 Query: 361 gc-cgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactac 417 | |||||||||||| ||| || |||||||||| || |||| ||||||||||||| Sbjct: 2159 ccaggagtggaaccccaaggtggacgtgcacctgcggtcggacggctacaccaactac 2216
>gb|AF019296.1|AF019296 Zea mays starch synthase isoform zSTSII-1 (zSSIIa) mRNA, partial cds Length = 2865 Score = 170 bits (86), Expect = 2e-39 Identities = 337/418 (80%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 ||||| |||||||| || ||||||||||||||||| |||||| |||| | || | ||| Sbjct: 1807 tggcacactgcactcctgcctgtttatctgaaggcatattacagagaccatgggttaatg 1866 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 ||||| ||||| || || ||||| || |||||||| || || ||||| ||||| |||||| Sbjct: 1867 cagtacactcgctccgtcctcgtcatacataacatcgcccaccagggccgtggtcctgta 1926 Query: 121 gatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatgac 180 ||||| ||| |||||||||||||| |||||| | | || ||| | ||||| || Sbjct: 1927 gatgaattcccgtacatggacttgcctgaacactaccttcaacatttcgagctgtacgat 1986 Query: 181 cccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtg 240 ||| | ||||||||||| |||| | || || || || ||||||||||||||||||||| Sbjct: 1987 cccgtcggtggcgagcacgccaacatctttgccgcgggtctgaagatggcagaccgggtg 2046 Query: 241 gtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctc 300 || || ||||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 2047 gtgactgtcagccgcggctacctgtgggagctgaagacagtggaaggcggctggggcctc 2106 Query: 301 catgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacaca 360 || ||||| || |||||||||||| | ||||||||||||||||||||||| || Sbjct: 2107 cacgacatcatccgttctaacgactggaagatcaatggcatcgtgaacggcatcgac-ca 2165 Query: 361 gc-cgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactac 417 | |||||||||||| ||| || |||||||||| || |||| ||||||||||||| Sbjct: 2166 ccaggagtggaaccccaaggtggacgtgcacctgcggtcggacggctacaccaactac 2223
>gb|BT023979.1| Zea mays clone EL01N0326C07 mRNA sequence Length = 2248 Score = 163 bits (82), Expect = 6e-37 Identities = 335/418 (80%), Gaps = 1/418 (0%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaagg-cgtattaccgagataacggcctgat 59 ||||| |||||||| || |||||||||||||||| | |||||| |||| | || | || Sbjct: 902 tggcacactgcactcctgcctgtttatctgaagggcatattacagagaccatgggttaat 961 Query: 60 gcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgt 119 |||||| ||||| || || ||||| || |||||||| || || ||||| ||||| ||||| Sbjct: 962 gcagtacactcgctccgtcctcgtcatacataacatcgcccaccagggccgtggtcctgt 1021 Query: 120 agatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgtatga 179 |||||| ||| |||||||||||||| |||||| | | || ||| | ||||| || Sbjct: 1022 agatgaattcccgtacatggacttgcctgaacactaccttcaacatttcgagctgtacga 1081 Query: 180 ccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggt 239 ||| | ||||||||||| |||| | || || || || |||||||||||||||||||| Sbjct: 1082 tcccgtgggtggcgagcacgccaacatctttgccgcgggtctgaagatggcagaccgggt 1141 Query: 240 ggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcct 299 ||| || ||||||| |||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1142 ggtgactgtcagccgcggctacctgtgggagctgaagacagtggaaggcggctggggcct 1201 Query: 300 ccatgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacac 359 ||| ||||| || |||||||||||| | ||||||||||||||||||||||| Sbjct: 1202 ccacgacatcatccgttctaacgactggaagatcaatggcatcgtgaacggcatcgacca 1261 Query: 360 agccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactac 417 | |||||||||||| ||| || |||||||||| || |||| ||||||||||||| Sbjct: 1262 cgaggagtggaaccccaaggtggacgtgcacctgcggtcggacggctacaccaactac 1319
>dbj|AK110575.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-E03, full insert sequence Length = 1097 Score = 135 bits (68), Expect = 1e-28 Identities = 131/152 (86%) Strand = Plus / Minus Query: 293 ggggcctccatgacataataaaccagaacgactggaagctggatggcatcgtgaacggca 352 |||||||||| || ||||||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 1097 ggggcctccacgagataataaaccacaacgactggaagctgcagggcatcgtgaacggca 1038 Query: 353 tcgacacagccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacacca 412 |||||| ||||| |||||||||| ||| || | ||||||||| ||||||| |||| ||| Sbjct: 1037 tcgacatggccgaatggaaccccgaggtggacgagcacctgcagtccgacggctacgcca 978 Query: 413 actacacccgagacacgttggacaccggcaag 444 ||||||| || ||| |||||||||||||| Sbjct: 977 actacacgttcgagacgctggacaccggcaag 946
>gb|AY499410.1| Zea mays starch synthase IIa (sugary2) gene, partial cds Length = 4548 Score = 133 bits (67), Expect = 5e-28 Identities = 192/231 (83%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 188 gtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccg 247 ||||||||||| |||| | || || || || ||||||||||||||||||||||| || | Sbjct: 3677 gtggcgagcacgccaacatctttgccgcgggtctgaagatggcagaccgggtggtgactg 3736 Query: 248 tcagccatggctacatgtgggagctgaagacgatggaaggcggctggggcctccatgaca 307 |||||| |||||| |||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 3737 tcagccgcggctacctgtgggagctgaagacagtggaaggcggctggggcctccacgaca 3796 Query: 308 taataaaccagaacgactggaagctggatggcatcgtgaacggcatcgacacagc-cgag 366 | || |||||||||||| | ||||||||||||||||||||||| || | ||| Sbjct: 3797 tcatccgttctaacgactggaagatcaatggcatcgtgaacggcatcgac-caccaggag 3855 Query: 367 tggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaactac 417 ||||||||| ||| || |||||||||| || |||| ||||||||||||| Sbjct: 3856 tggaaccccaaggtggacgtgcacctgcggtcggacggctacaccaactac 3906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgaga 47 ||||| |||||||| || ||||||||||||||||| |||||| |||| Sbjct: 3293 tggcacactgcactcctgcctgtttatctgaaggcatattacagaga 3339
>gb|AY133249.1| Hordeum vulgare subsp. vulgare starch synthase II mRNA, complete cds Length = 2972 Score = 117 bits (59), Expect = 3e-23 Identities = 290/367 (79%) Strand = Plus / Plus Query: 82 gtgatccataacattgctcatcagggacgtggccctgtagatgacttcaacatgatggac 141 ||||| |||||||| ||||| ||||| ||||||||||||||||| ||| | | || Sbjct: 1542 gtgatacataacatcgctcaccagggccgtggccctgtagatgaattcccgttcaccgag 1601 Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | | || |||||| | Sbjct: 1602 ttgcctgagcactacctggaacacttcagactgtacgaccccgtcggcggtgagcacgcc 1661 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| ||| |||| || ||| Sbjct: 1662 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtcgtgagccccgggtac 1721 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 ||||||||||||||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 1722 ctgtgggagctgaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 1781 Query: 322 gactggaagctggatggcatcgtgaacggcatcgacacagccgagtggaaccccgcggtc 381 ||||||||| |||||||||||||||||||||| ||||||||||| | ||| Sbjct: 1782 gactggaagacccgcggcatcgtgaacggcatcgacaacatggagtggaaccctgaggtg 1841 Query: 382 gatgtgcacctgcactccgacgactacaccaactacacccgagacacgttggacaccggc 441 || || |||||| | || |||| ||||||||||| | ||| | ||| ||||| ||||| Sbjct: 1842 gacgtccacctgaagtcggacggctacaccaacttctccctgaagacgctggactccggc 1901 Query: 442 aagcggc 448 ||||||| Sbjct: 1902 aagcggc 1908
>emb|AJ269504.1|TAE269504 Triticum aestivum mRNA for starch synthase IIa-3 (wSs2a-3 gene) Length = 2793 Score = 113 bits (57), Expect = 5e-22 Identities = 309/393 (78%) Strand = Plus / Plus Query: 56 tgatgcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggcc 115 |||||||||| ||||| || || | ||||| |||||||| ||||| ||||| ||||||| Sbjct: 1525 tgatgcagtacactcggtccattatggtgatacataacatcgctcaccagggccgtggcc 1584 Query: 116 ctgtagatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgt 175 | |||||||| ||| | | || ||||||||||||||| | || ||||||| ||||| Sbjct: 1585 cagtagatgagttcccgttcaccgagttgcctgagcactacctggaacacttcagactgt 1644 Query: 176 atgaccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagacc 235 | |||||| | |||| || ||| |||| ||||| || |||||||||||||| |||| Sbjct: 1645 acgaccccgtgggtggtgaacacgccaactacttcgccgccggcctgaagatggcggacc 1704 Query: 236 gggtggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggg 295 ||| ||| ||| |||| || ||| ||||||||||||||||| |||| |||||||||| Sbjct: 1705 aggttgtcgtcgtgagcccggggtacctgtgggagctgaagacggtggagggcggctggg 1764 Query: 296 gcctccatgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcg 355 | || || ||||| ||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1765 ggcttcacgacatcatacggcagaacgactggaagacccgcggcatcgtgaacggcatcg 1824 Query: 356 acacagccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaact 415 ||| ||||||||||||| ||| || || ||||| | || |||| ||||||||||| Sbjct: 1825 acaacatggagtggaaccccgaggtggacgtccacctcaagtcggacggctacaccaact 1884 Query: 416 acacccgagacacgttggacaccggcaagcggc 448 | ||| | ||| ||||| |||||||||||| Sbjct: 1885 tctccctggggacgctggactccggcaagcggc 1917
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 101 bits (51), Expect = 2e-18 Identities = 243/307 (79%) Strand = Plus / Plus Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | | || |||||| | Sbjct: 1910 ttgcctgagcactacctggaacacttcagactgtacgaccccgtcggcggtgagcacgcc 1969 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| ||| |||| || ||| Sbjct: 1970 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtcgtgagccccgggtac 2029 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 ||||||||||||||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 2030 ctgtgggagctgaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 2089 Query: 322 gactggaagctggatggcatcgtgaacggcatcgacacagccgagtggaaccccgcggtc 381 ||||||||| |||||||||||||||||||||| ||||||||||| | ||| Sbjct: 2090 gactggaagacccgcggcatcgtgaacggcatcgacaacatggagtggaaccctgaggtg 2149 Query: 382 gatgtgcacctgcactccgacgactacaccaactacacccgagacacgttggacaccggc 441 || || |||||| | || |||| ||||||||||| | ||| | ||| ||||| ||||| Sbjct: 2150 gacgtccacctgaagtcggacggctacaccaacttctccctgaagacgctggactccggc 2209 Query: 442 aagcggc 448 ||||||| Sbjct: 2210 aagcggc 2216
>dbj|AB201446.1| Triticum aestivum wSSII-B gene for starch synthase II-B, complete cds Length = 6811 Score = 101 bits (51), Expect = 2e-18 Identities = 243/307 (79%) Strand = Plus / Plus Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | |||| || ||| | Sbjct: 5891 ttgcctgagcactacctggaacacttcagactgtacgaccccgtgggtggtgaacacgcc 5950 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| ||| |||| || ||| Sbjct: 5951 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtcgtgagcccggggtac 6010 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 ||||||||||||||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 6011 ctgtgggagctgaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 6070 Query: 322 gactggaagctggatggcatcgtgaacggcatcgacacagccgagtggaaccccgcggtc 381 ||||||||| |||||||||||||||||||||| ||||||||||||| ||| Sbjct: 6071 gactggaagacccgcggcatcgtgaacggcatcgacaacatggagtggaaccccgaggtg 6130 Query: 382 gatgtgcacctgcactccgacgactacaccaactacacccgagacacgttggacaccggc 441 || || ||||| | || |||| ||||||||||| | ||| | ||| ||||| ||||| Sbjct: 6131 gacgtccacctcaagtcggacggctacaccaacttctccctggggacgctggactccggc 6190 Query: 442 aagcggc 448 ||||||| Sbjct: 6191 aagcggc 6197
>emb|AJ269502.1|TAE269502 Triticum aestivum mRNA for starch synthase IIa-1 (wSs2a-1 gene) Length = 2866 Score = 101 bits (51), Expect = 2e-18 Identities = 219/275 (79%) Strand = Plus / Plus Query: 56 tgatgcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggcc 115 |||||||||| ||||| || || | ||||| |||||||| ||||| ||||| ||||||| Sbjct: 1603 tgatgcagtacactcggtccattatggtgatacataacatcgctcaccagggccgtggcc 1662 Query: 116 ctgtagatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgt 175 |||||||||| ||| | | || ||||||||||||||| | || ||||||| ||||| Sbjct: 1663 ctgtagatgaattcccgttcaccgagttgcctgagcactacctggaacacttcagactgt 1722 Query: 176 atgaccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagacc 235 | |||||| | |||| || ||| |||| ||||| || |||||||||||||| |||| Sbjct: 1723 acgaccccgtgggtggtgaacacgccaactacttcgccgccggcctgaagatggcggacc 1782 Query: 236 gggtggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggg 295 ||| ||| || |||| || ||| ||||||||||||||||| |||| |||||||||| Sbjct: 1783 aggttgtcgtggtgagccccgggtacctgtgggagctgaagacggtggagggcggctggg 1842 Query: 296 gcctccatgacataataaaccagaacgactggaag 330 | || || ||||| ||| ||||||||||||||| Sbjct: 1843 ggcttcacgacatcatacggcagaacgactggaag 1877
>gb|U66377.1|TAU66377 Triticum aestivum starch synthase mRNA, partial cds Length = 1742 Score = 101 bits (51), Expect = 2e-18 Identities = 219/275 (79%) Strand = Plus / Plus Query: 56 tgatgcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggcc 115 |||||||||| ||||| || || | ||||| |||||||| ||||| ||||| ||||||| Sbjct: 472 tgatgcagtacactcggtccattatggtgatacataacatcgctcaccagggccgtggcc 531 Query: 116 ctgtagatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgt 175 |||||||||| ||| | | || ||||||||||||||| | || ||||||| ||||| Sbjct: 532 ctgtagatgaattcccgttcaccgagttgcctgagcactacctggaacacttcagactgt 591 Query: 176 atgaccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagacc 235 | |||||| | |||| || ||| |||| ||||| || |||||||||||||| |||| Sbjct: 592 acgaccccgtgggtggtgaacacgccaactacttcgccgccggcctgaagatggcggacc 651 Query: 236 gggtggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggg 295 ||| ||| || |||| || ||| ||||||||||||||||| |||| |||||||||| Sbjct: 652 aggttgtcgtggtgagccccgggtacctgtgggagctgaagacggtggagggcggctggg 711 Query: 296 gcctccatgacataataaaccagaacgactggaag 330 | || || ||||| ||| ||||||||||||||| Sbjct: 712 ggcttcacgacatcatacggcagaacgactggaag 746
>emb|AJ269503.1|TAE269503 Triticum aestivum mRNA for starch synthase IIa-2 (wSs2a-2 gene) Length = 2780 Score = 99.6 bits (50), Expect = 8e-18 Identities = 310/394 (78%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 56 tgatgcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggcc 115 |||||||||| ||||| || || | ||||| |||||||| || || ||||| ||||||| Sbjct: 1448 tgatgcagtacactcggtccattatggtgatacataacatcgcgcaccagggccgtggcc 1507 Query: 116 ctgtagatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgt 175 | |||||||| ||| | | || ||||||||||||||| | || ||||||| ||||| Sbjct: 1508 cagtagatgaattcccgttcaccgagttgcctgagcactacctggaacacttcagactgt 1567 Query: 176 atgaccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagacc 235 | |||||| | |||| |||||| |||| ||||| || |||||||||||||| |||| Sbjct: 1568 acgaccccgtgggtggtgagcacgccaactacttcgccgccggcctgaagatggcggacc 1627 Query: 236 gggtggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggg 295 ||| ||| || |||| || ||| |||||||||| |||||| |||| |||||||||| Sbjct: 1628 aggttgtcgtggtgagccccgggtacctgtgggagctcaagacggtggagggcggctggg 1687 Query: 296 gcctccatgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcg 355 | || || ||||| ||| ||||||||||||||| |||||||| |||||||||| Sbjct: 1688 ggcttcacgacatcatacggcagaacgactggaagacccgcggcatcgtcaacggcatcg 1747 Query: 356 acacagccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaact 415 ||| ||||||||||||| ||| || || ||||| || || |||| ||||||||||| Sbjct: 1748 acaacatggagtggaaccccgaggtggacgtccacctccagtcggacggctacaccaact 1807 Query: 416 acaccc-gagacacgttggacaccggcaagcggc 448 | ||| ||| |||| ||||| |||||||||||| Sbjct: 1808 tctccctgag-cacgctggactccggcaagcggc 1840
>dbj|AB201445.1| Triticum aestivum wSSII-A gene for starch synthase II-A, complete cds Length = 6898 Score = 95.6 bits (48), Expect = 1e-16 Identities = 245/308 (79%), Gaps = 2/308 (0%) Strand = Plus / Plus Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | |||| |||||| | Sbjct: 5978 ttgcctgagcactacctggaacacttcagactgtacgaccccgtgggtggtgagcacgcc 6037 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| || |||| || ||| Sbjct: 6038 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtggtgagccccgggtac 6097 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 |||||||||| |||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 6098 ctgtgggagctcaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 6157 Query: 322 gactggaagctggatggcatcgtgaacggcatcgacacagccgagtggaaccccgcggtc 381 ||||||||| |||||||| ||||||||||||| ||||||||||||| ||| Sbjct: 6158 gactggaagacccgcggcatcgtcaacggcatcgacaacatggagtggaaccccgaggtg 6217 Query: 382 gatgtgcacctgcactccgacgactacaccaactacaccc-gagacacgttggacaccgg 440 || || ||||| || || |||| ||||||||||| | ||| ||| |||| ||||| |||| Sbjct: 6218 gacgtccacctccagtcggacggctacaccaacttctccctgag-cacgctggactccgg 6276 Query: 441 caagcggc 448 |||||||| Sbjct: 6277 caagcggc 6284
>gb|AF155217.2|AF155217 Triticum aestivum starch synthase IIA mRNA, complete cds Length = 2842 Score = 89.7 bits (45), Expect = 7e-15 Identities = 306/393 (77%) Strand = Plus / Plus Query: 56 tgatgcagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggcc 115 |||||||||| ||||| || || | ||||| |||||||| || || ||||| ||||||| Sbjct: 1482 tgatgcagtacactcggtccattatggtgatacataacatcgcgcaccagggccgtggcc 1541 Query: 116 ctgtagatgacttcaacatgatggacttgcctgagcactacatcgaccacttcaaactgt 175 | |||||||| ||| | | || ||||||||||||||| | || ||||||| ||||| Sbjct: 1542 cagtagatgaattcccgttcaccgagttgcctgagcactacctggaacacttcagactgt 1601 Query: 176 atgaccccctttgtggcgagcacaacaacgtgttcgctgctggcctgaagatggcagacc 235 | |||||| | |||| |||||| |||| ||||| || |||||||||||||| |||| Sbjct: 1602 acgaccccgtgggtggtgagcacgccaactacttcgccgccggcctgaagatggcggacc 1661 Query: 236 gggtggtcaccgtcagccatggctacatgtgggagctgaagacgatggaaggcggctggg 295 ||| ||| || |||| || ||| |||||||||| |||||| |||| |||||||||| Sbjct: 1662 aggttgtcgtggtgagccccgggtacctgtgggagctcaagacggtggagggcggctggg 1721 Query: 296 gcctccatgacataataaaccagaacgactggaagctggatggcatcgtgaacggcatcg 355 | || || ||||| ||| ||||||||||||||| |||||||| |||||||||| Sbjct: 1722 ggcttcacgacatcatacggcagaacgactggaagacccgcggcatcgtcaacggcatcg 1781 Query: 356 acacagccgagtggaaccccgcggtcgatgtgcacctgcactccgacgactacaccaact 415 ||| ||||||||||||| ||| || || ||||| | || |||| ||||||||||| Sbjct: 1782 acaacatggagtggaaccccgaggtggacgtccacctcaagtcggacggctacaccaact 1841 Query: 416 acacccgagacacgttggacaccggcaagcggc 448 | ||| | ||| ||||| |||||||||||| Sbjct: 1842 tctccctggggacgctggactccggcaagcggc 1874
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Plus Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | |||| || ||| | Sbjct: 7333 ttgcctgagcactacctggaacacttcagactgtacgaccccgtgggtggtgaacacgcc 7392 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| || |||| || ||| Sbjct: 7393 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtggtgagccccgggtac 7452 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 ||||||||||||||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 7453 ctgtgggagctgaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 7512 Query: 322 gactggaag 330 ||||||||| Sbjct: 7513 gactggaag 7521
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 81.8 bits (41), Expect = 2e-12 Identities = 152/189 (80%) Strand = Plus / Plus Query: 142 ttgcctgagcactacatcgaccacttcaaactgtatgaccccctttgtggcgagcacaac 201 ||||||||||||||| | || ||||||| |||||| |||||| | |||| || ||| | Sbjct: 6090 ttgcctgagcactacctggaacacttcagactgtacgaccccgtgggtggtgaacacgcc 6149 Query: 202 aacgtgttcgctgctggcctgaagatggcagaccgggtggtcaccgtcagccatggctac 261 ||| ||||| || |||||||||||||| |||| ||| ||| || |||| || ||| Sbjct: 6150 aactacttcgccgccggcctgaagatggcggaccaggttgtcgtggtgagccccgggtac 6209 Query: 262 atgtgggagctgaagacgatggaaggcggctggggcctccatgacataataaaccagaac 321 ||||||||||||||||| |||| ||||||||||| || || ||||| ||| |||||| Sbjct: 6210 ctgtgggagctgaagacggtggagggcggctgggggcttcacgacatcatacggcagaac 6269 Query: 322 gactggaag 330 ||||||||| Sbjct: 6270 gactggaag 6278
>ref|NM_110984.2| Arabidopsis thaliana transferase, transferring glycosyl groups AT3G01180 mRNA, complete cds Length = 2757 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 28 ctgaaggcgtattaccgagataacggcctgatgcagtatactcgttctgttctcgtgatc 87 |||||||| |||||||| ||| |||| | ||| | || || || |||||||| || || Sbjct: 1512 ctgaaggcctattaccgggatcacggaataatgaaatacacacgatctgttcttgtaatt 1571 Query: 88 cataacattgctcatcagggacgtggccctgtagatga 125 |||||||||||||||||||| || || || |||||||| Sbjct: 1572 cataacattgctcatcaggggcggggaccggtagatga 1609
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 337 ggcatcgtgaacggcatcgacacagccgagtggaaccc 374 |||||||| |||||||||||||| ||| |||||||||| Sbjct: 1733534 ggcatcgtcaacggcatcgacacggcccagtggaaccc 1733497
>gb|AY054467.1| Arabidopsis thaliana putative glycogen synthase (At3g01180; T4P13.13) mRNA, complete cds Length = 2687 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 28 ctgaaggcgtattaccgagataacggcctgatgcagtatactcgttctgttctcgtgatc 87 |||||||| |||||||| ||| |||| | ||| | || || || |||||||| || || Sbjct: 1446 ctgaaggcctattaccgggatcacggaataatgaaatacacacgatctgttcttgtaatt 1505 Query: 88 cataacattgctcatcagggacgtggccctgtagatga 125 |||||||||||||||||||| || || || |||||||| Sbjct: 1506 cataacattgctcatcaggggcggggaccggtagatga 1543
>gb|BT002555.1| Arabidopsis thaliana putative glycogen synthase (At3g01180) mRNA, complete cds Length = 2502 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 28 ctgaaggcgtattaccgagataacggcctgatgcagtatactcgttctgttctcgtgatc 87 |||||||| |||||||| ||| |||| | ||| | || || || |||||||| || || Sbjct: 1345 ctgaaggcctattaccgggatcacggaataatgaaatacacacgatctgttcttgtaatt 1404 Query: 88 cataacattgctcatcagggacgtggccctgtagatga 125 |||||||||||||||||||| || || || |||||||| Sbjct: 1405 cataacattgctcatcaggggcggggaccggtagatga 1442
>emb|X88790.1|PSSTASYNT P.sativum mRNA for starch synthase (2988 bp) Length = 2988 Score = 50.1 bits (25), Expect = 0.006 Identities = 106/133 (79%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggcgtattaccgagataacggcctgatg 60 |||||||||||| | || || || |||||||| || ||||| || ||| | || ||||| Sbjct: 1337 tggcatactgcattgctgccggtgtatctgaaagcatattatcgcgatcatggtttgatg 1396 Query: 61 cagtatactcgttctgttctcgtgatccataacattgctcatcagggacgtggccctgta 120 | ||||| || || ||||||||||| |||||||| ||||| ||||| || ||||| || Sbjct: 1397 aactatacacgatcagttctcgtgattcataacatagctcaccagggtcggggcccggtc 1456 Query: 121 gatgacttcaaca 133 || || ||||||| Sbjct: 1457 gaggatttcaaca 1469
>ref|NM_196673.1| Oryza sativa (japonica cultivar-group) putative soluble starch synthase II-1 (OSJNBb0016G17.2), mRNA Length = 3219 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 1402 tggcatactgcactactgcctgtttatttgaaggc 1436 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 70 cgttctgttctcgtgatccataacattgctcatcagggacgtggccctgtagatgacttc 129 ||||||||||| || || || || || || |||||||| |||||||| ||||||||||| Sbjct: 1471 cgttctgttcttgtcatacacaatatagcacatcagggtcgtggcccattagatgacttc 1530 Query: 130 a 130 | Sbjct: 1531 a 1531
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 337 ggcatcgtgaacggcatcgacacagccgagtggaa 371 |||||||||||||||||||| || | ||||||||| Sbjct: 3572631 ggcatcgtgaacggcatcgataccgacgagtggaa 3572665
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence, complete sequence Length = 93735 Score = 46.1 bits (23), Expect = 0.098 Identities = 65/79 (82%) Strand = Plus / Plus Query: 28 ctgaaggcgtattaccgagataacggcctgatgcagtatactcgttctgttctcgtgatc 87 |||||||| |||||||| ||| |||| | ||| | || || || |||||||| || || Sbjct: 33587 ctgaaggcctattaccgggatcacggaataatgaaatacacacgatctgttcttgtaatt 33646 Query: 88 cataacattgctcatcagg 106 ||||||||||||||||||| Sbjct: 33647 cataacattgctcatcagg 33665
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 18445 tggcatactgcactactgcctgtttatttgaaggc 18479
>gb|AF383878.1|AF383878 Oryza sativa soluble starch synthase II-1 mRNA, complete cds Length = 2903 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 1274 tggcatactgcactactgcctgtttatttgaaggc 1308 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 70 cgttctgttctcgtgatccataacattgctcatcagggacgtggccctgtagatgacttc 129 ||||||||||| || || || || || || |||||||| |||||||| ||||||||||| Sbjct: 1343 cgttctgttcttgtcatacacaatatagcacatcagggtcgtggcccattagatgacttc 1402 Query: 130 a 130 | Sbjct: 1403 a 1403
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 15164746 tggcatactgcactactgcctgtttatttgaaggc 15164780
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 73359 tggcatactgcactactgcctgtttatttgaaggc 73393
>dbj|AK072339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045E09, full insert sequence Length = 4987 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 3348 tggcatactgcactactgcctgtttatttgaaggc 3382 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 70 cgttctgttctcgtgatccataacattgctcatcagggacgtggccctgtagatgacttc 129 ||||||||||| || || || || || || |||||||| |||||||| ||||||||||| Sbjct: 3417 cgttctgttcttgtcatacacaatatagcacatcagggtcgtggcccattagatgacttc 3476 Query: 130 a 130 | Sbjct: 3477 a 3477
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 tggcatactgcacttctacctgtttatctgaaggc 35 |||||||||||||| || ||||||||| ||||||| Sbjct: 15172987 tggcatactgcactactgcctgtttatttgaaggc 15173021
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 ggcatcgtgaacggcatcgaca 358 |||||||||||||||||||||| Sbjct: 1956323 ggcatcgtgaacggcatcgaca 1956344
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 cgcggtcgatgtgcacctgcac 396 |||||||||||||||||||||| Sbjct: 925584 cgcggtcgatgtgcacctgcac 925563
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 gacttcaacatgatggacttg 144 ||||||||||||||||||||| Sbjct: 21594 gacttcaacatgatggacttg 21614
>gb|AC123647.9| Mus musculus chromosome 3, clone RP23-105J10, complete sequence Length = 202415 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gcacttctacctgtttatctg 30 ||||||||||||||||||||| Sbjct: 134459 gcacttctacctgtttatctg 134479
>gb|BT013620.1| Lycopersicon esculentum clone 132421F, mRNA sequence Length = 2857 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 73 tctgttctcgtgatccataacattgctcatcagggacgtgg 113 ||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 1585 tctgtcctggtgattcataacatcgctcatcagggtcgtgg 1625
>gb|AC115934.10| Mus musculus chromosome 3, clone RP24-539A2, complete sequence Length = 147659 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 gacttcaacatgatggacttg 144 ||||||||||||||||||||| Sbjct: 39772 gacttcaacatgatggacttg 39752
>emb|X87988.2|STSTARSYN Solanum tuberosum mRNA for soluble starch synthase II precursor (ssII gene) Length = 2631 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 73 tctgttctcgtgatccataacattgctcatcagggacgtgg 113 ||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 1378 tctgtcctggtgattcataacatcgctcatcagggtcgtgg 1418
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 atggcatcgtgaacggcatcgacac 359 |||||||||| |||||||||||||| Sbjct: 3800525 atggcatcgtcaacggcatcgacac 3800549
>gb|AC153527.9| Mus musculus 10 BAC RP23-320A6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205006 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gcacttctacctgtttatctg 30 ||||||||||||||||||||| Sbjct: 59469 gcacttctacctgtttatctg 59489
>gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183269 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gcacttctacctgtttatctg 30 ||||||||||||||||||||| Sbjct: 172892 gcacttctacctgtttatctg 172912
>gb|AF268969.1| Mesorhizobium loti ADP-glucose pyrophosphorylase (glgC), glycogen synthetase (glgA), and phosphoglucomutase (pgm) genes, complete cds Length = 5015 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 atggcatcgtgaacggcatcgacac 359 |||||||||| |||||||||||||| Sbjct: 2191 atggcatcgtcaacggcatcgacac 2215
>gb|AC120124.9| Mus musculus chromosome 7, clone RP23-21A23, complete sequence Length = 237001 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgaagatggcagaccgggtggtca 244 |||||||||| ||||||||||||| Sbjct: 125115 tgaagatggctgaccgggtggtca 125092
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tgaagacgatggaaggcggc 291 |||||||||||||||||||| Sbjct: 5096583 tgaagacgatggaaggcggc 5096602
>gb|AF026421.2|AF026421 Chlamydomonas reinhardtii clone CD191 soluble starch synthase mRNA, complete cds Length = 3049 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 318 gaacgactggaagctggatggcatcgtgaacggcatcgac 357 |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1176 gaacaactggaagctgcgcggcattgtgaacggcatcgac 1215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,769,105 Number of Sequences: 3902068 Number of extensions: 2769105 Number of successful extensions: 67631 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67261 Number of HSP's gapped (non-prelim): 308 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
