ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65e09 |
|---|---|
| Clone Library Name | barley_pub |
>PTSP_BOMMO (P82003) Prothoracicostatic peptide precursor (Bom-PTSP)| Length = 274 Score = 41.2 bits (95), Expect = 0.001 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW 410 + ++S W + GW+ ++S W + W+ + S W + GW+ ++S W Sbjct: 70 QDLNSAWGKRGWQDLNSAWGKRAWQDLNSAWGKRGWQDLNSAW 112 Score = 39.7 bits (91), Expect = 0.003 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 416 + ++S W + W+ ++S W + GW + S W + W+ ++S W WQ Sbjct: 139 QDLNSAWGKRAWQDLNSAWGKRGWNDISSVWGKRAWQDLNSAWGKRAWQ 187 Score = 39.7 bits (91), Expect = 0.003 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = +3 Query: 288 IHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 416 +HS W + W+ + S W + W+ + S W + GW+ ++S W WQ Sbjct: 48 LHSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQDLNSAWGKRAWQ 94 Score = 38.9 bits (89), Expect = 0.005 Identities = 13/48 (27%), Positives = 25/48 (52%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRWWQARP 425 + ++S W + GW + S W + W+ + S W + W+ + S W + P Sbjct: 151 QDLNSAWGKRGWNDISSVWGKRAWQDLNSAWGKRAWQDMSSAWGKRAP 198 Score = 38.1 bits (87), Expect = 0.009 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 416 + + S W + W+ ++S W + GW+ + S W + W+ ++S W WQ Sbjct: 58 QDMSSAWGKRAWQDLNSAWGKRGWQDLNSAWGKRAWQDLNSAWGKRGWQ 106 Score = 37.4 bits (85), Expect = 0.015 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 416 + ++S W + W+ ++S W + W+ + S W + GW I S W WQ Sbjct: 127 QDLNSVWGKRAWQDLNSAWGKRAWQDLNSAWGKRGWNDISSVWGKRAWQ 175 Score = 34.3 bits (77), Expect = 0.13 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +3 Query: 315 WKRVHSWWWQDGWKRVCSRWWQDGWKRIHSRW----WQ 416 W +HS W + W+ + S W + W+ ++S W WQ Sbjct: 45 WSSLHSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQ 82 Score = 32.0 bits (71), Expect = 0.62 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 21/64 (32%) Frame = +3 Query: 282 EQIHSRWWQDGWKRVHSWW-------------WQD--------GWKRVCSRWWQDGWKRI 398 + ++S W + GW+ ++S W WQD W+ + S W + W+ + Sbjct: 94 QDLNSAWGKRGWQDLNSAWGKRDDDEAMEKKSWQDLNSVWGKRAWQDLNSAWGKRAWQDL 153 Query: 399 HSRW 410 +S W Sbjct: 154 NSAW 157
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 35.8 bits (81), Expect = 0.043 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -3 Query: 420 WPATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPA-TTCCESVLSKTGKTA 259 +P+T ++ P TD KP+++ PATT+ P T PA T S S T TA Sbjct: 286 FPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTA 340
>PIT1_SHEEP (P79364) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 35.4 bits (80), Expect = 0.056 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAHRIT 211 HP+ +C PVS H H + C + S G A SL PCL++ H ++ Sbjct: 28 HPSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYGVMAGSLTPCLYEFPDHTLS 87
>PIT1_BOVIN (P10036) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 33.9 bits (76), Expect = 0.16 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAHRIT 211 HP+ +C PVS H H + C + S G A SL PCL+ H ++ Sbjct: 28 HPSAAECLPVSNHATNVMSTATGLHYSVPFCHYGNQSSTYGVMAGSLTPCLYKFPDHTLS 87
>FLVC2_MOUSE (Q91X85) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 551 Score = 33.5 bits (75), Expect = 0.21 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = -3 Query: 396 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTGKTAVSLVPCLHDGAAHR 217 S S HP+ + VS HP+ + VS HP+ + SV + +A+ G H Sbjct: 32 SGSIHPSVSGHPSVSGHPSVSGHPSVSIHPSVSIDPSVSVRPSSSALPSTLAQPSGLTHH 91 Query: 216 ITGVRE 199 + VRE Sbjct: 92 SSLVRE 97 Score = 32.3 bits (72), Expect = 0.48 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -3 Query: 417 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSK 274 P+ G SVS HP+ + VS HP+ + VS P+++ S L++ Sbjct: 37 PSVSGHPSVSGHPSVSGHPSVSIHPSVSIDPSVSVRPSSSALPSTLAQ 84
>CRBB1_BOVIN (P07318) Beta crystallin B1| Length = 252 Score = 32.0 bits (71), Expect = 0.62 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Frame = +3 Query: 30 RSAAAAAVTTG------SRPPPGLADGDGGEGAWARRPSAPAADLLTGLPPAA 170 +++A AAV G + PPPG A G G A A P+ PA LPP + Sbjct: 6 KASATAAVNPGPDGKGKAGPPPGPAPGSGPAPAPAPAPAQPAPAAKAELPPGS 58
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = -3 Query: 396 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCC-ESVLSKTGKTAVSLVPCLHD---- 232 S+ + PA C P+ + + S +P S A E V+ G+ +LVPC H+ Sbjct: 397 SLPSSPAAAACAPLDSGASENSRKPPSASSAPALARECVVCAEGEVMAALVPCGHNLFCM 456 Query: 231 GAAHRITGVRE 199 A RI G E Sbjct: 457 DCAVRICGKSE 467
>YQBO_BACSU (P45931) Hypothetical protein yqbO| Length = 1585 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 15/49 (30%) Frame = +3 Query: 297 RWWQDGWKRVHSW---WWQDG---WKRVCS---------RWWQDGWKRI 398 +WW W+ V SW W + WK V S +WW + W+ + Sbjct: 940 KWWSGKWESVKSWSKNKWDNAKSIWKSVKSSISETLFSKKWWSEKWQSV 988 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 15/59 (25%) Frame = +3 Query: 291 HSRWWQDGWKRVHSW---WWQDG---WKRV---------CSRWWQDGWKRIHSRWWQAR 422 +S WW + W V SW W W+ V +WW W+ + S W Q++ Sbjct: 860 NSEWWSEKWSGVKSWAQNKWNSASPVWESVKGKIKSTLFSEKWWSGKWEGVKS-WAQSK 917
>Y2392_ARCFU (O30279) Hypothetical protein AF2392| Length = 86 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 5/34 (14%) Frame = +3 Query: 336 WWQDGWKRVCSRWWQ-----DGWKRIHSRWWQAR 422 WW GW RWW GW R RWW R Sbjct: 3 WWMPGWGGRGWRWWYRATGLPGWMR--CRWWGYR 34 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 5/31 (16%) Frame = +3 Query: 300 WWQDGW-KRVHSWWWQ----DGWKRVCSRWW 377 WW GW R WW++ GW R RWW Sbjct: 3 WWMPGWGGRGWRWWYRATGLPGWMR--CRWW 31
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = -3 Query: 405 GCESVSTHPATTD---CKPVSTHPATTSCEPVSTHPATTCCES 286 GC + S P T C P +T TT+C P + P C ++ Sbjct: 27 GCPTTSPKPCQTTVPTCAPTTTTTTTTTCAPPTRPPPPPCTDA 69
>FIRA_PLAFF (P06916) 300 kDa antigen AG231 (Fragment)| Length = 310 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -3 Query: 417 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTG 268 P TI E V+T T +PV+T T+ EPV+T T E + K G Sbjct: 64 PVTIE-EPVTTQEPVTTQEPVTTQEPVTTQEPVTTQEPVTVEEHIDEKKG 112 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -3 Query: 417 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSK 274 P TI E V+T T +PV+T T+ EPV+T T E V ++ Sbjct: 52 PVTIE-EPVTTQEPVTIEEPVTTQEPVTTQEPVTTQEPVTTQEPVTTQ 98
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 423 AWPATIGC-ESVSTHPATTDC---KPVSTHPATTSCEPVSTHPATTC 295 A P T C + T P TT C KP H TT C T + TC Sbjct: 260 ATPTTTSCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTC 306
>FLVC2_RAT (P60815) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 546 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 396 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSK 274 SVS HP+ + VS HP+ + VS HP+++ S L++ Sbjct: 38 SVSGHPSVSIHPSVSGHPSVSIDPSVSVHPSSSAHPSTLAQ 78
>PIT1_HUMAN (P28069) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 30.4 bits (67), Expect = 1.8 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAHRIT 211 H + +C PVS H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>CHSX_USTMA (Q99126) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) Length = 760 Score = 30.0 bits (66), Expect = 2.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 Query: 336 WWQDGWKRVCSRWWQDGWKRIHSR 407 W +DGWK+V DG K+IH R Sbjct: 340 WGKDGWKKVVVAIISDGRKKIHPR 363
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -3 Query: 417 PATIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTGKTAVS 253 P T ++ +T P TT +T P TT+ + +T P TT + +K T S Sbjct: 474 PTTTTTKATTTTPTTT-----TTTPTTTTTKATTTTPTTTTTTTTTTKATTTTTS 523 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = -3 Query: 411 TIGCESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTGKT 262 T ++ +T P TT P +T TT+ + +T P TT + +K T Sbjct: 416 TTTTKATTTTPTTTTTTPTTTTTTTTTTKATTTTPTTTTPTTTTTKATTT 465
>SORC2_HUMAN (Q96PQ0) VPS10 domain-containing receptor SorCS2 precursor| Length = 1159 Score = 25.4 bits (54), Expect(2) = 3.0 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%) Frame = +1 Query: 7 PEKKKNSIGLPPP---PRSRPDLVLL 75 P + S G PPP PRSRP L+LL Sbjct: 15 PTARAPSPGAPPPPRSPRSRPLLLLL 40 Score = 22.7 bits (47), Expect(2) = 3.0 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Frame = +3 Query: 69 PPPGLADGDGGEGAWAR--RPSAP 134 PP G A+ GGE AR P AP Sbjct: 71 PPAGRAEPGGGEDRQARGTEPGAP 94
>BOWEL_DROME (Q9VQU9) Protein bowel (Brother of odd with entrails limited)| Length = 744 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 12 KKEKFNRSAAAAAVTTGSRPPPGLADGDGGEG 107 + ++F S AAAA G PG AD +GG G Sbjct: 25 RMDQFMNSMAAAAAAVGGGGLPGAADRNGGSG 56
>PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early development| regulatory protein 2) (p36) Length = 850 Score = 29.6 bits (65), Expect = 3.1 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 36 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLP 161 A+ T+G+ G GG G RP+AP + +G+P Sbjct: 14 ASVTTNTSGTNSSSGCISSSGGGGGSGGRPTAPQISVYSGIP 55
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = +3 Query: 3 PTRKKEKFNRSAAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTG 155 P R + RS AAAA G+ P PG G GG G+ R PAA L G Sbjct: 74 PRRPGAESRRSPAAAAPAPGA-PVPG-GGGGGGGGSPGRGEGGPAALALHG 122
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +3 Query: 36 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPPAA 170 A+AAA +G PPGLA G G G AP L+ G AA Sbjct: 93 ASAAAPASGPPAPPGLAAGPGPAG------GAPTPALVAGSSAAA 131
>MAK3_SCHPO (O74539) Peroxide stress-activated histidine kinase mak3 (EC| 2.7.13.3) (Mcs4-associated kinase 3) (His-Asp phosphorelay kinase phk2) Length = 2344 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 Query: 291 ESVLSKTGKTAVSLVPCLHDGAAHRITGVREALQ 190 + VL KTG+T++ +PC G H I +R+ L+ Sbjct: 306 DHVLEKTGRTSLFYLPCSIYGREHEIKLIRKILR 339
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 29.3 bits (64), Expect = 4.0 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -2 Query: 412 HHRL*IRFHPSCHHRLQTRFHPSCHHQL*TRFHPSCHH 299 HH+ +FH HH+ Q +FH HH +FH HH Sbjct: 185 HHQQKQQFHD--HHQQQQQFHDHHHHHQEQQFHD--HH 218
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -3 Query: 417 PATIGCESVSTHPATTDCKPVSTH---PATTSCEPVSTHPATTCCESVLSKTGKTAVSLV 247 P T S ++ P TT +P ST P TT ++ P TT + + T + + Sbjct: 26 PGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTATQPTXTSTQTPGTTQL 85 Query: 246 P 244 P Sbjct: 86 P 86 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -3 Query: 417 PATIGCESVSTH---PATTDCKPVSTHPATTSCEPVSTH---PATTCCESVLSKTGKTA 259 P T + ST P TT ++ P TT+ +P ST P TT S S TA Sbjct: 11 PTTTATQPTSTSTQTPGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTA 69
>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2| Length = 917 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +3 Query: 3 PTRKKEKFNRSAAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPA 137 P R E + + AAA R P G G A RRPSAP+ Sbjct: 234 PARNNETLHLRSGAAAGGDDERRPAPRRSGPGAPPAPPRRPSAPS 278
>IF3_MYXXA (P48516) Translation initiation factor IF-3| Length = 246 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 6/70 (8%) Frame = +3 Query: 3 PTRKKEKFNRSAAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLL------TGLPP 164 PT K + R A T RPPP A G G A A + A+ P Sbjct: 176 PTPKVAQKARELVRQAATAAKRPPPPGAPGAGKSAAGASSGAEEKAEETAEEKKEAQAAP 235 Query: 165 AAVH*QEPTA 194 AA Q PTA Sbjct: 236 AAAEAQSPTA 245
>PIT1_PIG (Q04788) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAHRIT 211 H + +C P S H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>PIT1_MOUSE (Q00286) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAHRIT 211 H + +C P S H H + C + S G A SL PCL+ H ++ Sbjct: 28 HHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLS 87
>ALYS_STRPN (P06653) Autolysin (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine| amidase) (Murein hydrolase) (Mucopeptide aminohydrolase) (Cell wall hydrolase) Length = 318 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 26/70 (37%) Frame = +3 Query: 282 EQIHSRWWQ---------DGWKRVH--SWWWQD-------GWKRVCSRWW--------QD 383 E+I+ W+ D W++ +W+W D GWK++ +W+ + Sbjct: 200 EKINGTWYYFDSSGYMLADRWRKHTDGNWYWFDNSGEMATGWKKIADKWYYFNEEGAMKT 259 Query: 384 GWKRIHSRWW 413 GW + W+ Sbjct: 260 GWVKYKDTWY 269
>IF2_LACSS (Q38W81) Translation initiation factor IF-2| Length = 937 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 390 STHPATTDCKPVSTHPATTSCEPVS 316 S P TT+ +P ++ PATT PVS Sbjct: 248 SARPNTTNNRPTNSRPATTPSRPVS 272
>SLAP_BACST (P35825) S-layer protein precursor (Surface layer protein)| Length = 1228 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +2 Query: 245 GTRLTAVFPVLLRTDSQQVVAGWVETGSQLVVAGWVETGLQSVVAGWVETDSQPMV 412 G + T F L+T S +V G V T +L GWV+ G + V+ +TD+ V Sbjct: 780 GQKFTIQFSEELKTSSGSLVGGKV-TVEKLTNNGWVDAGTGTTVSVAPKTDANGKV 834
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = -3 Query: 399 ESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTGKTAVSLVP 244 +S S+ + P ++ P T+S P STH ++ S S + S P Sbjct: 40 QSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAP 91
>SMD3_DROME (O44437) Small nuclear ribonucleoprotein SM D3 (snRNP core protein| D3) (SM-D3) Length = 151 Score = 28.5 bits (62), Expect = 6.9 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +3 Query: 60 GSRPPPGLADGDGGEGAWARRPS 128 G+ PPG G GG GAW P+ Sbjct: 121 GTGGPPGAPGGSGGRGAWQGGPT 143
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/52 (26%), Positives = 23/52 (44%) Frame = -3 Query: 399 ESVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSKTGKTAVSLVP 244 +S S+ + P ++ P T+S P STH ++ S S + S P Sbjct: 40 QSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAP 91
>PIT1_CANFA (Q9TTI7) Pituitary-specific positive transcription factor 1 (Pit-1)| (Growth hormone factor 1) (GHF-1) Length = 291 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 2/57 (3%) Frame = -3 Query: 384 HPATTDCKPVSTHPATTSCEPVSTHPATTCCE--SVLSKTGKTAVSLVPCLHDGAAH 220 HP +C P S H H + C + S G A L PCL+ H Sbjct: 28 HPGAAECLPGSNHATNVVSTATGLHYSVPSCHYGNQPSTYGVMAGGLTPCLYKFPEH 84
>CHSA_EMENI (P30584) Chitin synthase A (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase A) (Class-II chitin synthase A) Length = 1013 Score = 28.5 bits (62), Expect = 6.9 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 336 WWQDGWKRVCSRWWQDGWKRIHSR 407 W +DGWK++ DG K++H R Sbjct: 329 WGKDGWKKIVVCIISDGRKKVHPR 352
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = +3 Query: 30 RSAAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLP 161 RSA A PP L GG G W+RR S +D G P Sbjct: 285 RSAPGAFGGPPRAPPADLPLPVGGPGGWSRRASPAPSDSSPGEP 328
>CTPD_MYCTU (P63685) Probable cation-transporting P-type ATPase D (EC 3.6.3.-)| Length = 657 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +3 Query: 36 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPP 164 AA AA+T PP L GD G AW +A D+ L P Sbjct: 482 AAMAALTAA---PPVLLTGDNGRAAWRVARNAGITDVRAALLP 521
>CTPD_MYCBO (P63686) Probable cation-transporting P-type ATPase D (EC 3.6.3.-)| Length = 657 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +3 Query: 36 AAAAAVTTGSRPPPGLADGDGGEGAWARRPSAPAADLLTGLPP 164 AA AA+T PP L GD G AW +A D+ L P Sbjct: 482 AAMAALTAA---PPVLLTGDNGRAAWRVARNAGITDVRAALLP 521
>MTMR1_HUMAN (Q13613) Myotubularin-related protein 1 (EC 3.1.3.-)| Length = 665 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Frame = +3 Query: 33 SAAAAAVTTGSRPPPGLADG------DGGEGAWARRPSAPAADLLTG 155 +AAAA G P PG A G GG A +R+PS D TG Sbjct: 6 AAAAAGCEGGGGPNPGPAGGRRPPRAAGGATAGSRQPSVETLDSPTG 52
>CHS2_ASPNG (P30582) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) (Fragment) Length = 189 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 336 WWQDGWKRVCSRWWQDGWKRIHSR 407 W +DGWK++ DG K++H R Sbjct: 27 WGKDGWKKIVVCIIADGRKKVHPR 50
>PCDGM_PANTR (Q5DRA2) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 78 GLADGDGGEGAWARRPSAPAAD 143 G ADGDGG G RR +P+ D Sbjct: 719 GNADGDGGGGQCCRRQDSPSPD 740
>PCDGM_HUMAN (Q9Y5F6) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 78 GLADGDGGEGAWARRPSAPAAD 143 G ADGDGG G RR +P+ D Sbjct: 719 GNADGDGGGGQCCRRQDSPSPD 740
>HEMH_PHOPR (Q6LTE0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 322 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 294 CESVLSKTGKTAVSLVPCLHDGAAH 220 C+ K G +L+PCL+D AH Sbjct: 283 CKETFIKAGGDVFNLIPCLNDNEAH 307
>FLVC2_HUMAN (Q9UPI3) Feline leukemia virus subgroup C receptor-related protein| 2 (Calcium-chelate transporter) (CCT) Length = 526 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 Query: 396 SVSTHPATTDCKPVSTHPATTSCEPVSTHPATTCCESVLSK 274 SVS HP+ VS HP+ + VS HP+++ S L++ Sbjct: 26 SVSVHPS------VSVHPSVSINPSVSVHPSSSAHPSALAQ 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.138 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,062,970 Number of Sequences: 219361 Number of extensions: 1132251 Number of successful extensions: 5722 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4827 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5653 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
