ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65d11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete sequence Length = 128256 Score = 109 bits (55), Expect = 8e-21 Identities = 142/171 (83%) Strand = Plus / Minus Query: 121 accacgtgctcggctacgtcaaggcgacgtcgctcaagtgcgccgtcgacctcggcgtcc 180 |||| ||||| |||||||||| | ||| | ||||||||||||||||||| || ||| ||| Sbjct: 82723 accatgtgctgggctacgtcaggtcgatggcgctcaagtgcgccgtcgatctaggcatcc 82664 Query: 181 cggccgccatccataagcgcggcggcaccgccaccctggccgacatcgcgaccgacgcca 240 | | ||| || | ||||||||| | |||||| | |||||||||||||||||| || Sbjct: 82663 ccgacgctgtcaaccgccgcggcggcgctgccaccgtcgccgacatcgcgaccgacaccg 82604 Query: 241 aggtgcacccggccaaggtcgccgacctccggcgcatgatggcgctgctca 291 ||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 82603 gcgtgcatccagccaaggtcgccgacctccggcgcatgatggagctgctca 82553
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 73.8 bits (37), Expect = 4e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 121 accacgtgctcggctacgtcaaggcgacgtcgctcaagtgcgccgtcgacctcggcgtcc 180 |||||||| || ||||| ||||| | | | |||||||||||||||| || |||||| ||| Sbjct: 134319 accacgtgttcagctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatcc 134260 Query: 181 cggccgccatccataagcgcggcggcaccgccaccctggccgacatcgcgaccgacgcca 240 | | ||| ||||| ||||||||| |||||||||||||| ||||||| |||| || Sbjct: 134259 ccgacgcgatccaccgccgcggcggcgccgccaccctggccaacatcgccgccgataccg 134200 Query: 241 aggtgcacccggccaaggtcgccgacctccggcgcatgatggcgctgctcaccgcctcgg 300 |||||| || ||| || ||||||||||| || | ||| |||||||||| |||||| Sbjct: 134199 gcgtgcacgcgtccagactcaccgacctccggtgcctcatgaagctgctcaccacctcgg 134140 Query: 301 gcatcttcaccaccaccgccg 321 |||| ||| || ||||||||| Sbjct: 134139 gcatgttcgccgccaccgccg 134119
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 73.8 bits (37), Expect = 4e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 121 accacgtgctcggctacgtcaaggcgacgtcgctcaagtgcgccgtcgacctcggcgtcc 180 |||||||| || ||||| ||||| | | | |||||||||||||||| || |||||| ||| Sbjct: 33939 accacgtgttcagctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatcc 33880 Query: 181 cggccgccatccataagcgcggcggcaccgccaccctggccgacatcgcgaccgacgcca 240 | | ||| ||||| ||||||||| |||||||||||||| ||||||| |||| || Sbjct: 33879 ccgacgcgatccaccgccgcggcggcgccgccaccctggccaacatcgccgccgataccg 33820 Query: 241 aggtgcacccggccaaggtcgccgacctccggcgcatgatggcgctgctcaccgcctcgg 300 |||||| || ||| || ||||||||||| || | ||| |||||||||| |||||| Sbjct: 33819 gcgtgcacgcgtccagactcaccgacctccggtgcctcatgaagctgctcaccacctcgg 33760 Query: 301 gcatcttcaccaccaccgccg 321 |||| ||| || ||||||||| Sbjct: 33759 gcatgttcgccgccaccgccg 33739
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 4e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 121 accacgtgctcggctacgtcaaggcgacgtcgctcaagtgcgccgtcgacctcggcgtcc 180 |||||||| || ||||| ||||| | | | |||||||||||||||| || |||||| ||| Sbjct: 19031121 accacgtgttcagctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatcc 19031062 Query: 181 cggccgccatccataagcgcggcggcaccgccaccctggccgacatcgcgaccgacgcca 240 | | ||| ||||| ||||||||| |||||||||||||| ||||||| |||| || Sbjct: 19031061 ccgacgcgatccaccgccgcggcggcgccgccaccctggccaacatcgccgccgataccg 19031002 Query: 241 aggtgcacccggccaaggtcgccgacctccggcgcatgatggcgctgctcaccgcctcgg 300 |||||| || ||| || ||||||||||| || | ||| |||||||||| |||||| Sbjct: 19031001 gcgtgcacgcgtccagactcaccgacctccggtgcctcatgaagctgctcaccacctcgg 19030942 Query: 301 gcatcttcaccaccaccgccg 321 |||| ||| || ||||||||| Sbjct: 19030941 gcatgttcgccgccaccgccg 19030921
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 4e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 121 accacgtgctcggctacgtcaaggcgacgtcgctcaagtgcgccgtcgacctcggcgtcc 180 |||||||| || ||||| ||||| | | | |||||||||||||||| || |||||| ||| Sbjct: 19189770 accacgtgttcagctacatcaagcccatggcgctcaagtgcgccgtggagctcggcatcc 19189711 Query: 181 cggccgccatccataagcgcggcggcaccgccaccctggccgacatcgcgaccgacgcca 240 | | ||| ||||| ||||||||| |||||||||||||| ||||||| |||| || Sbjct: 19189710 ccgacgcgatccaccgccgcggcggcgccgccaccctggccaacatcgccgccgataccg 19189651 Query: 241 aggtgcacccggccaaggtcgccgacctccggcgcatgatggcgctgctcaccgcctcgg 300 |||||| || ||| || ||||||||||| || | ||| |||||||||| |||||| Sbjct: 19189650 gcgtgcacgcgtccagactcaccgacctccggtgcctcatgaagctgctcaccacctcgg 19189591 Query: 301 gcatcttcaccaccaccgccg 321 |||| ||| || ||||||||| Sbjct: 19189590 gcatgttcgccgccaccgccg 19189570
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 151 cgctcaagtgcgccgtcgacctcggcgtcccggccgccatccataagcgcggcggcaccg 210 ||||||||||||||| ||| |||||| |||| ||||||||||| ||||||||| ||| Sbjct: 9845404 cgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccg 9845345 Query: 211 ccac 214 |||| Sbjct: 9845344 ccac 9845341
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 151 cgctcaagtgcgccgtcgacctcggcgtcccggccgccatccataagcgcggcggcaccg 210 ||||||||||||||| ||| |||||| |||| ||||||||||| ||||||||| ||| Sbjct: 135646 cgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccg 135587 Query: 211 ccac 214 |||| Sbjct: 135586 ccac 135583
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 151 cgctcaagtgcgccgtcgacctcggcgtcccggccgccatccataagcgcggcggcaccg 210 ||||||||||||||| ||| |||||| |||| ||||||||||| ||||||||| ||| Sbjct: 42039 cgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggcggcgccg 41980 Query: 211 ccac 214 |||| Sbjct: 41979 ccac 41976
>gb|AF506520.2| Streptomyces hygroscopicus AHBA gene cluster, partial sequence Length = 13513 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 203 cggcaccgccaccctggccgacatcg 228 |||||||| ||||||||||||||||| Sbjct: 4987 cggcaccgacaccctggccgacatcg 5012
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcgcggccgatga 346 ||||||| ||||||| |||||||||||||| Sbjct: 1532492 cgccgagcacggcgaaggcgcggccgatga 1532463
>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete sequence Length = 213187 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ggaagtgagcccgcaggagctgctgg 99 |||||||||||||||||||| ||||| Sbjct: 78705 ggaagtgagcccgcaggagccgctgg 78680
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 cggcgacggcgcggccgatgacacg 350 ||||||||||||||||| ||||||| Sbjct: 2310681 cggcgacggcgcggccggtgacacg 2310705
>emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in linkage group 5, complete sequence Length = 223990 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tttcatttgctgtgaactcag 31 ||||||||||||||||||||| Sbjct: 154571 tttcatttgctgtgaactcag 154551
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 gcggcggcaccgccaccctggccga 223 ||||||||||||||||||| ||||| Sbjct: 37588313 gcggcggcaccgccaccctagccga 37588337
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 gcggcggcaccgccaccctggccga 223 ||||||||||||||||||| ||||| Sbjct: 48787 gcggcggcaccgccaccctagccga 48811
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 caccgccaccctggccgacatcgc 229 ||||| |||||||||||||||||| Sbjct: 3641140 caccggcaccctggccgacatcgc 3641163
>ref|XM_604746.2| PREDICTED: Bos taurus similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) (LOC526376), partial mRNA Length = 4672 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gcctcgggcatcttcaccac 313 |||||||||||||||||||| Sbjct: 3920 gcctcgggcatcttcaccac 3901
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgctgctcaccgcctcgggc 302 |||||||||||||||||||| Sbjct: 2335154 cgctgctcaccgcctcgggc 2335173
>ref|XM_657268.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4756.2), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 ccgacatcgcgaccgacgccaagg 243 |||||||||||| ||||||||||| Sbjct: 1937 ccgacatcgcgagcgacgccaagg 1960
>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence Length = 185995 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttttgcatttcatttgctgt 23 |||||||||||||||||||| Sbjct: 52237 ttttgcatttcatttgctgt 52218
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctggccgacatcgcgaccga 235 |||||||||||||||||||| Sbjct: 1368978 ctggccgacatcgcgaccga 1368959
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgctgctcaccgcctcgggc 302 |||||||||||||||||||| Sbjct: 2027865 cgctgctcaccgcctcgggc 2027884
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gcgcatgatggcgctgctca 291 |||||||||||||||||||| Sbjct: 168660 gcgcatgatggcgctgctca 168641 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcgcatgatggcgctgctca 291 |||||||||||||||||||| Sbjct: 103083 gcgcatgatggcgctgctca 103102
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tcggcgtcccggccgccatc 191 |||||||||||||||||||| Sbjct: 82252 tcggcgtcccggccgccatc 82271
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgaggacggcgacggcgcg 338 |||||||||||||||||||| Sbjct: 213855 ccgaggacggcgacggcgcg 213836
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccaccctggccgacatcgcg 230 |||||||||||||||||||| Sbjct: 1510274 ccaccctggccgacatcgcg 1510293
>gb|AE012467.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 375 of 460 of the complete genome Length = 11889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccaccgccgaggacggcgac 332 |||||||||||||||||||| Sbjct: 2128 ccaccgccgaggacggcgac 2109
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgaggacggcgacggcgcg 338 |||||||||||||||||||| Sbjct: 2220220 ccgaggacggcgacggcgcg 2220201
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gatggcgctgctcaccgcct 297 |||||||||||||||||||| Sbjct: 1058714 gatggcgctgctcaccgcct 1058695
>gb|S64190.1| type 3 actin [Emiliania huxleyi=Prymnesiophyte algae, CCMP379, mRNA Partial, 629 nt] Length = 629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tcttcaccaccaccgccgag 323 |||||||||||||||||||| Sbjct: 566 tcttcaccaccaccgccgag 585
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 caccgccaccctggccgaca 225 |||||||||||||||||||| Sbjct: 459080 caccgccaccctggccgaca 459061
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 450299 cgccgaggacggcgacggcg 450280
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccaccgccgaggacggcgac 332 |||||||||||||||||||| Sbjct: 823725 ccaccgccgaggacggcgac 823744
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 ccgccgaggacggcgacggcgcgg 339 ||||||| |||||||||||||||| Sbjct: 17055614 ccgccgacgacggcgacggcgcgg 17055637
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 20295252 cgccgaggacggcgacggcg 20295233
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gacggcgacggcgcggccga 343 |||||||||||||||||||| Sbjct: 5272629 gacggcgacggcgcggccga 5272610
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 19857724 cgccgaggacggcgacggcg 19857705
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgccgtcgacctcggcgtcc 180 |||||||||||||||||||| Sbjct: 372850 cgccgtcgacctcggcgtcc 372869
>gb|AC108486.2| Homo sapiens chromosome 3 clone RP11-114C6, complete sequence Length = 157904 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgcatttcatttgctgtgaa 26 |||||||||||||||||||| Sbjct: 66825 tgcatttcatttgctgtgaa 66844
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gccgaggacggcgacggcgc 337 |||||||||||||||||||| Sbjct: 559869 gccgaggacggcgacggcgc 559888
>gb|AC093557.4| Homo sapiens chromosome 3 clone RP11-56P22, complete sequence Length = 149941 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgcatttcatttgctgtgaa 26 |||||||||||||||||||| Sbjct: 119998 tgcatttcatttgctgtgaa 120017
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 35325 cgccgaggacggcgacggcg 35306
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cggcgacggcgcggccgatg 345 |||||||||||||||||||| Sbjct: 2760771 cggcgacggcgcggccgatg 2760752
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 ccgccgaggacggcgacggcgcgg 339 ||||||| |||||||||||||||| Sbjct: 49273 ccgccgacgacggcgacggcgcgg 49296
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 37863 cgccgaggacggcgacggcg 37844
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 4152 cgccgaggacggcgacggcg 4133
>dbj|AK108285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D05, full insert sequence Length = 863 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 163 cgccgaggacggcgacggcg 144
>ref|NM_207954.1| Eremothecium gossypii AAR060Cp (AAR060C), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 444 cgccgaggacggcgacggcg 463
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 tccagaaccacgtgctcggctacg 138 ||||||||| |||||||||||||| Sbjct: 1102744 tccagaaccgcgtgctcggctacg 1102721
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 gccgtcgacctcggcgtcccggcc 185 ||||| |||||||||||||||||| Sbjct: 2527062 gccgtggacctcggcgtcccggcc 2527039
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 cgccgaggacggcgacggcg 336 |||||||||||||||||||| Sbjct: 348292 cgccgaggacggcgacggcg 348311
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcaccgccaccctg 218 |||||||||||||||||||| Sbjct: 3260716 gcggcggcaccgccaccctg 3260735 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gggcatcttcaccaccaccg 318 |||||||||||||||||||| Sbjct: 3224221 gggcatcttcaccaccaccg 3224240
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 cgccgtcgacctcggcgtcccggc 184 ||||||||||||||||||| |||| Sbjct: 2704442 cgccgtcgacctcggcgtcgcggc 2704419
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 acggcgcggccgatgacacggccg 354 |||||||||||||||||| ||||| Sbjct: 2013299 acggcgcggccgatgacaaggccg 2013322
>emb|AL732296.11| Mouse DNA sequence from clone RP23-131P6 on chromosome 2, complete sequence Length = 203503 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tttcatttgctgtgaactca 30 |||||||||||||||||||| Sbjct: 47124 tttcatttgctgtgaactca 47143
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gacggcgacggcgcggccga 343 |||||||||||||||||||| Sbjct: 9330 gacggcgacggcgcggccga 9311 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,952,169 Number of Sequences: 3902068 Number of extensions: 2952169 Number of successful extensions: 88016 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84291 Number of HSP's gapped (non-prelim): 3721 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
