ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65d08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 258 bits (130), Expect = 8e-66 Identities = 166/178 (93%) Strand = Plus / Plus Query: 103 ccggagccggagcgaaggggaagaagggcgcggcgggccgtaaggccggcgggccgagga 162 |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 163 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 222 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 223 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 287
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 258 bits (130), Expect = 8e-66 Identities = 166/178 (93%) Strand = Plus / Plus Query: 103 ccggagccggagcgaaggggaagaagggcgcggcgggccgtaaggccggcgggccgagga 162 |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 163 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 222 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 223 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 287
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 234 bits (118), Expect = 1e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 87 atggacgcctcgggcaccggagccggagcgaaggggaagaagggcgcggcgggccgtaag 146 ||||||||| | ||||| ||||| |||| ||||| ||||||||| ||||| || || ||| Sbjct: 51 atggacgccaccggcactggagctggagggaaggcgaagaagggagcggccggtcgcaag 110 Query: 147 gccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttcccc 206 |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 111 gccggcgggccgaggaagaagtcggtgacgaggtccgtgaaggccgggctccagttcccc 170 Query: 207 gtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggc 266 ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| || Sbjct: 171 gtcggccgcatcgggcgctacctcaagaagggccgctacgcgcagcgcgtcggcagcggt 230 Query: 267 gcccccgtctacct 280 |||||||||||||| Sbjct: 231 gcccccgtctacct 244
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 214 bits (108), Expect = 1e-52 Identities = 150/164 (91%) Strand = Plus / Plus Query: 117 aaggggaagaagggcgcggcgggccgtaaggccggcgggccgaggaagaagtcggtgacg 176 |||||||||||||| ||||| || || ||||| ||||| || |||||||||||||||||| Sbjct: 93 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 152 Query: 177 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 236 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 153 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 212 Query: 237 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 213 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacct 256
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 214 bits (108), Expect = 1e-52 Identities = 150/164 (91%) Strand = Plus / Plus Query: 117 aaggggaagaagggcgcggcgggccgtaaggccggcgggccgaggaagaagtcggtgacg 176 |||||||||||||| ||||| || || ||||| ||||| || |||||||||||||||||| Sbjct: 242 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 301 Query: 177 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 236 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 302 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 361 Query: 237 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 362 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacct 405
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 58 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 117 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 118 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 177 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 178 ggcgcccccgtctacct 194
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Minus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9471665 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9471606 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9471605 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9471546 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 9471545 ggcgcccccgtctacct 9471529 Score = 119 bits (60), Expect = 5e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2463931 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2463989 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 2463990 cccgtcggccgtatcgggcgctacctcaagaa 2464021 Score = 113 bits (57), Expect = 3e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 164 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 223 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 28997918 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 28997977 Query: 224 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 28997978 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacct 28998034
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Minus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 169065 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 169006 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 169005 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 168946 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 168945 ggcgcccccgtctacct 168929
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Minus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9469786 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9469727 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9469726 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9469667 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 9469666 ggcgcccccgtctacct 9469650 Score = 119 bits (60), Expect = 5e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2464041 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2464099 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 2464100 cccgtcggccgtatcgggcgctacctcaagaa 2464131 Score = 113 bits (57), Expect = 3e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 164 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 223 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 29089340 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 29089399 Query: 224 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 29089400 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacct 29089456
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 17416697 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 17416756 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 17416757 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 17416816 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 17416817 ggcgcccccgtctacct 17416833
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 70089 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 70148 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 70149 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 70208 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 70209 ggcgcccccgtctacct 70225
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 176 bits (89), Expect = 2e-41 Identities = 125/137 (91%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 148 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 207 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 208 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 267 Query: 264 ggcgcccccgtctacct 280 ||||||||||||||||| Sbjct: 268 ggcgcccccgtctacct 284
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 176 bits (89), Expect = 2e-41 Identities = 158/182 (86%) Strand = Plus / Plus Query: 99 ggcaccggagccggagcgaaggggaagaagggcgcggcgggccgtaaggccggcgggccg 158 ||||||||||| || | |||||||||||||| ||||| || || |||| ||||||||| Sbjct: 81 ggcaccggagcagggggtaaggggaagaagggagcggccgggcgcaaggtcggcgggcca 140 Query: 159 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 218 ||||||||||||||| || |||| || |||||||| |||||||||||||||||||||||| Sbjct: 141 aggaagaagtcggtgtcgaggtccgtgaaggccggtctccagttccccgtcggccgcatc 200 Query: 219 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 278 ||||| ||| | ||||||||||| |||||| || |||||||| ||||||||||||||| Sbjct: 201 gggcgctacttgaagaagggccgctacgcgcagnyygtcggcaccggcgcccccgtctac 260 Query: 279 ct 280 || Sbjct: 261 ct 262
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 172 bits (87), Expect = 4e-40 Identities = 120/131 (91%) Strand = Plus / Plus Query: 150 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 209 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 55 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 114 Query: 210 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 269 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 115 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 174 Query: 270 cccgtctacct 280 ||||||||||| Sbjct: 175 cccgtctacct 185
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 4e-40 Identities = 120/131 (91%) Strand = Plus / Plus Query: 150 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 209 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 706990 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 707049 Query: 210 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 269 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 707050 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 707109 Query: 270 cccgtctacct 280 ||||||||||| Sbjct: 707110 cccgtctacct 707120 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 22512739 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 22512680 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 22512679 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 22512620 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 22512619 ccccgtctacct 22512608
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 172 bits (87), Expect = 4e-40 Identities = 120/131 (91%) Strand = Plus / Plus Query: 150 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 209 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 132 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 191 Query: 210 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 269 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 192 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 251 Query: 270 cccgtctacct 280 ||||||||||| Sbjct: 252 cccgtctacct 262
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 172 bits (87), Expect = 4e-40 Identities = 120/131 (91%) Strand = Plus / Plus Query: 150 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 209 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 52189 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 52248 Query: 210 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 269 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 52249 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 52308 Query: 270 cccgtctacct 280 ||||||||||| Sbjct: 52309 cccgtctacct 52319
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 155 bits (78), Expect = 9e-35 Identities = 111/122 (90%) Strand = Plus / Plus Query: 159 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 218 ||||||||| ||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 87 aggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcatc 146 Query: 219 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 278 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 147 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 206 Query: 279 ct 280 || Sbjct: 207 ct 208
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 155 bits (78), Expect = 9e-35 Identities = 111/122 (90%) Strand = Plus / Plus Query: 159 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 218 ||||||||| ||||||| || || |||||||||||||| ||||||||||||||||||||| Sbjct: 110 aggaagaaggcggtgacccgctccgtcaaggccgggctgcagttccccgtcggccgcatc 169 Query: 219 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 278 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 170 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 229 Query: 279 ct 280 || Sbjct: 230 ct 231
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 149 bits (75), Expect = 6e-33 Identities = 111/123 (90%) Strand = Plus / Plus Query: 158 gaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcat 217 |||||||||| ||||||| || || || |||||||||||||||||||||||||||||||| Sbjct: 107 gaggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcat 166 Query: 218 cgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtcta 277 |||||| ||||||||||||||||| |||||| || ||||||| | |||||||||||||| Sbjct: 167 cgggcgctacctcaagaagggccgctacgcgcaggccgtcggctccggcgcccccgtcta 226 Query: 278 cct 280 ||| Sbjct: 227 cct 229
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 147 bits (74), Expect = 2e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 159 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 218 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 219 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 278 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 279 ct 280 || Sbjct: 1934 ct 1935
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 147 bits (74), Expect = 2e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 159 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 218 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 219 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 278 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 279 ct 280 || Sbjct: 1934 ct 1935
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 143 bits (72), Expect = 3e-31 Identities = 111/124 (89%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||| ||||||||| ||||||||||||||| || |||| || |||||||||||||||||| Sbjct: 145 aaggtcggcgggccaaggaagaagtcggtgtcgaggtccgtgaaggccgggctccagttc 204 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 |||||||||||||||||||| ||| | ||||||||||| |||||| |||| |||||||| Sbjct: 205 cccgtcggccgcatcgggcgctacttgaagaagggccgctacgcgcagcgtgtcggcacc 264 Query: 264 ggcg 267 |||| Sbjct: 265 ggcg 268
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 8e-29 Identities = 86/92 (93%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 7800461 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 7800520 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 7800521 cccgtcggccgtatcgggcgctacctcaagaa 7800552
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 135 bits (68), Expect = 8e-29 Identities = 86/92 (93%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 14843 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 14902 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 14903 cccgtcggccgtatcgggcgctacctcaagaa 14934
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 135 bits (68), Expect = 8e-29 Identities = 86/92 (93%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 112959 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 113018 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 113019 cccgtcggccgtatcgggcgctacctcaagaa 113050
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 57 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 116 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 117 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 176 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 177 ccccgtctacct 188
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 7789 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 7730 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 7729 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 7670 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 7669 ccccgtctacct 7658
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 102146 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 102087 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 102086 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 102027 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 102026 ccccgtctacct 102015
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 128 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 187 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 188 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 247 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 248 ccccgtctacct 259
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 123 bits (62), Expect = 3e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| || |||| ||||| ||||||| || ||||||||||||| |||||||| Sbjct: 113 cggcgggccgaagaggaagccggtgtcgcggtcagttaaggccgggctccttttccccgt 172 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 ||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| Sbjct: 173 gggccgcatcggacggtacctgaagaaagggcggtacgcgcagcgcgtgggcacgggcgc 232 Query: 269 ccccgt 274 ||||| Sbjct: 233 tcccgt 238
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 119 bits (60), Expect = 5e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 36427 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 36485 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 ||||||||||| |||||||| ||||||||||| Sbjct: 36486 cccgtcggccgtatcgggcgctacctcaagaa 36517
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 119 bits (60), Expect = 5e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 149 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 208 ||||||||||| ||||||| ||||| | | || |||||||||||||||||||||||||| Sbjct: 127 cggcgggccgaagaagaagccggtgtccccctccgtcaaggccgggctccagttccccgt 186 Query: 209 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 268 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 187 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 246 Query: 269 ccccgtctacct 280 |||||||||||| Sbjct: 247 ccccgtctacct 258
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 113 bits (57), Expect = 3e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 164 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 223 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 38059 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 38118 Query: 224 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 38119 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacct 38175
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 113 bits (57), Expect = 3e-22 Identities = 102/117 (87%) Strand = Plus / Minus Query: 164 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 223 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141373 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 141314 Query: 224 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 141313 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacct 141257
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 113 bits (57), Expect = 3e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 164 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 223 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 181213 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 181272 Query: 224 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||| Sbjct: 181273 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacct 181329
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 22313977 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 22313918 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 |||||| |||| |||||||| ||||||||||| Sbjct: 22313917 cccgtcagccgtatcgggcgctacctcaagaa 22313886 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgt 208 |||||||||||||||||||||||| Sbjct: 21539131 caaggccgggctccagttccccgt 21539154 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 21536451 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 21536510 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | || |||||||||||||| Sbjct: 21536511 cgccgagcgcgtcggcgccggggcccccgtctacct 21536546
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 111 bits (56), Expect = 1e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 119223 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 119164 Query: 204 cccgtcggccgcatcgggcggtacctcaagaa 235 |||||| |||| |||||||| ||||||||||| Sbjct: 119163 cccgtcagccgtatcgggcgctacctcaagaa 119132
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20924851 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20924792 Query: 225 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| Sbjct: 20924791 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacct 20924736 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Minus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14469028 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14468969 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||| ||||||||||| Sbjct: 14468968 cgccgagcgcgtcggcgccggcgctcccgtctacct 14468933
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 159 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 218 Query: 225 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| Sbjct: 219 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacct 274
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20851065 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20851006 Query: 225 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| Sbjct: 20851005 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacct 20850950 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Minus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14423312 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14423253 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||| ||||||||||| Sbjct: 14423252 cgccgagcgcgtcggcgccggcgctcccgtctacct 14423217
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 10341 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 10282 Query: 225 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| Sbjct: 10281 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacct 10226
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 34144 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 34203 Query: 225 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||||||||| ||| |||||| ||||||||||| | ||||||||||||||||| Sbjct: 34204 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacct 34259
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 101 bits (51), Expect = 1e-18 Identities = 132/159 (83%) Strand = Plus / Plus Query: 122 gaagaagggcgcggcgggccgtaaggccggcgggccgaggaagaagtcggtgacgcggtc 181 |||||||||||| | || || |||| |||||| ||||||||||| |||||| | || || Sbjct: 51 gaagaagggcgccggcggacgcaagggcggcggcccgaggaagaaatcggtgtctcgatc 110 Query: 182 ggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccg 241 |||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||| | Sbjct: 111 cgtcaaggccgggctccagttccccgttggccgtctcggccgatacttgaagaagggcag 170 Query: 242 gtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||| |||| |||||||| || || || |||||||| Sbjct: 171 gtacgctcagcgtgtcggcaccggagctccggtctacct 209
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 101 bits (51), Expect = 1e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 186 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 245 |||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| Sbjct: 177 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 236 Query: 246 gcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||||||||||||||| Sbjct: 237 gcggagcgcgtcggcgccggcgcccccgtctacct 271
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 186 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 245 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 98 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 157 Query: 246 gcgaagcgcgtcggcacgggcgcccccgtctacct 280 | |||| |||||||| ||||||||||||||||| Sbjct: 158 tcccagcgtgtcggcaccggcgcccccgtctacct 192
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 85.7 bits (43), Expect = 7e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 186 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 245 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 169 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 228 Query: 246 gcgaagcgcgtcggcacgggcgcccccgtctacct 280 | |||| |||||||| ||||||||||||||||| Sbjct: 229 tcccagcgtgtcggcaccggcgcccccgtctacct 263
>gb|AY110108.1| Zea mays CL14299_1 mRNA sequence Length = 712 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 175 cgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaag 233 |||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 582 cgcggtcgaccaaggccgggctgcagttccccgtcggccgcatcgcgcgctacctcaag 524
>gb|BT016168.1| Zea mays clone Contig1 mRNA sequence Length = 676 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 141 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 200 Query: 225 tacctcaag 233 ||||||||| Sbjct: 201 tacctcaag 209
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 73.8 bits (37), Expect = 3e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 144 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 203 |||| |||||| ||||||||||| ||||| | || || ||||||||||| ||||||||| Sbjct: 58 aagggcggcggcccgaggaagaaatcggtctctcgctcagtcaaggccggcctccagttc 117 Query: 204 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 263 |||||||| || |||| || ||| | ||||||||| ||||||| |||| ||||| || Sbjct: 118 cccgtcggtcgtctcggccgatacttgaagaagggcaggtacgctcagcgtgtcggtacc 177 Query: 264 ggcgcccccgtctacct 280 || || || |||||||| Sbjct: 178 ggagctccggtctacct 194
>gb|AY105006.1| Zea mays PCO108932 mRNA sequence Length = 841 Score = 73.8 bits (37), Expect = 3e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 165 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 224 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 129 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 188 Query: 225 tacctcaag 233 ||||||||| Sbjct: 189 tacctcaag 197
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 63 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 122 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||||||||||||||| Sbjct: 123 cgccgagcgcgtcggcgccggcgcccccgtctacct 158
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 20566122 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 20566181 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||||||||||||||| Sbjct: 20566182 cgccgagcgcgtcggcgccggcgcccccgtctacct 20566217 Score = 56.0 bits (28), Expect = 6e-05 Identities = 96/120 (80%), Gaps = 9/120 (7%) Strand = Plus / Minus Query: 161 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 220 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 11503554 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 11503500 Query: 221 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 11503499 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 11503444
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 70083 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 70142 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||||||||||||||| Sbjct: 70143 cgccgagcgcgtcggcgccggcgcccccgtctacct 70178
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 40494 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 40553 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||||||||||||||| Sbjct: 40554 cgccgagcgcgtcggcgccggcgcccccgtctacct 40589
>dbj|D38091.1|WHTPH2AE Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-10 Length = 691 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 147 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 206 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| || | |||||| | ||||||||||||||||| Sbjct: 207 cgccgagagggtcggcgccggcgcccccgtctacct 242
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 145 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 204 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| || | |||||| | ||||||||||||||||| Sbjct: 205 cgccgagagggtcggcgccggcgcccccgtctacct 240
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/96 (82%), Gaps = 9/96 (9%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 7508130 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 7508180 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| |||||||||||| ||||| ||||||||||| Sbjct: 7508181 tgcgcagcgcgtcggcatcggcgcacccgtctacct 7508216
>gb|AY104828.1| Zea mays PCO072413 mRNA sequence Length = 741 Score = 63.9 bits (32), Expect = 3e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 ||||||||| |||||||||||||||||| | || | ||| ||||||| |||| ||| Sbjct: 120 caaggccggactccagttccccgtcggcaggattgccaggttcctcaaggcgggcaagta 179 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||| ||||||||||| | ||||||||||| ||||| Sbjct: 180 cgcggagcgcgtcggcgccggcgcccccgtgtacct 215
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/96 (82%), Gaps = 9/96 (9%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 30603 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 30653 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| |||||||||||| ||||| ||||||||||| Sbjct: 30654 tgcgcagcgcgtcggcatcggcgcacccgtctacct 30689
>ref|XM_481315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 56.0 bits (28), Expect = 6e-05 Identities = 96/120 (80%), Gaps = 9/120 (7%) Strand = Plus / Plus Query: 161 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 220 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 348 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 402 Query: 221 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 403 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 458
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 56.0 bits (28), Expect = 6e-05 Identities = 96/120 (80%), Gaps = 9/120 (7%) Strand = Plus / Minus Query: 161 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 220 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 57688 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 57634 Query: 221 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 57633 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 57578
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 56.0 bits (28), Expect = 6e-05 Identities = 96/120 (80%), Gaps = 9/120 (7%) Strand = Plus / Minus Query: 161 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 220 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 117543 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 117489 Query: 221 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 280 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 117488 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 117433
>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and histone H2A genes, complete cds Length = 4358 Score = 56.0 bits (28), Expect = 6e-05 Identities = 79/96 (82%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 ||||||||| || ||||||||||| |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3860 caaggccggcctgcagttccccgttggccgcattgcgcgctacctgaagaagggcaagta 3919 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||| |||| | ||||| ||||| ||||| Sbjct: 3920 cgccgagcgcatcggtgccggcgcgcccgtgtacct 3955
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccg 214 ||||||||||||||||||||||||||| Sbjct: 102 ggccgggctccagttccccgtcggccg 128
>gb|AY389710.1| Hyacinthus orientalis histone H2A mRNA, partial cds Length = 677 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccg 214 |||||||||||| ||||||||||||||||| Sbjct: 151 caaggccgggctacagttccccgtcggccg 180
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgt 208 |||||||||||||||||||||||| Sbjct: 218 caaggccgggctccagttccccgt 241
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | || |||||||||||||| Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacct 307
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgt 208 |||||||||||||||||||||||| Sbjct: 76915 caaggccgggctccagttccccgt 76938 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 74235 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 74294 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | || |||||||||||||| Sbjct: 74295 cgccgagcgcgtcggcgccggggcccccgtctacct 74330
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | || |||||||||||||| Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacct 307
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 178 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 237 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||| ||||||||||| Sbjct: 238 cgccgagcgcgtcggcgccggcgctcccgtctacct 273
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full insert sequence Length = 830 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgt 208 |||||||||||||||||||||||| Sbjct: 218 caaggccgggctccagttccccgt 241
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 177 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 236 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||| ||||||||||| Sbjct: 237 cgccgagcgcgtcggcgccggcgctcccgtctacct 272
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 213 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 272 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | || |||||||||||||| Sbjct: 273 cgccgagcgcgtcggcgccggggcccccgtctacct 308
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 48.1 bits (24), Expect = 0.015 Identities = 78/96 (81%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 244 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 48264 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 48323 Query: 245 cgcgaagcgcgtcggcacgggcgcccccgtctacct 280 ||| ||||||||||| | ||||| ||||||||||| Sbjct: 48324 cgccgagcgcgtcggcgccggcgctcccgtctacct 48359
>gb|DQ215051.1| Taeniopygia guttata clone 0061P0027A01 H2A histone family member V variant 1-like mRNA, complete sequence Length = 707 Score = 46.1 bits (23), Expect = 0.059 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgcatc 218 ||||||||| |||||||| |||||||||||| Sbjct: 119 ggccgggctgcagttcccagtcggccgcatc 149
>gb|DQ215050.1| Taeniopygia guttata clone 0058P0007H05 H2A histone family member V variant 1-like mRNA, complete sequence Length = 701 Score = 46.1 bits (23), Expect = 0.059 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgcatc 218 ||||||||| |||||||| |||||||||||| Sbjct: 113 ggccgggctgcagttcccagtcggccgcatc 143
>gb|DQ215047.1| Taeniopygia guttata clone 0058P0026B08 H2A histone family member V variant 1-like mRNA, complete sequence Length = 729 Score = 46.1 bits (23), Expect = 0.059 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgcatc 218 ||||||||| |||||||| |||||||||||| Sbjct: 141 ggccgggctgcagttcccagtcggccgcatc 171
>gb|DQ215046.1| Taeniopygia guttata clone 0058P0036G12 H2A histone family member V variant 1-like mRNA, complete sequence Length = 661 Score = 46.1 bits (23), Expect = 0.059 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgcatc 218 ||||||||| |||||||| |||||||||||| Sbjct: 60 ggccgggctgcagttcccagtcggccgcatc 90
>ref|XM_607721.2| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC529277), mRNA Length = 522 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccg 214 ||||||||||||||||||||| ||||| Sbjct: 64 ggccgggctccagttccccgtaggccg 90
>ref|XM_868899.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616790), mRNA Length = 413 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccg 214 ||||||||||||||||||||| ||||| Sbjct: 83 ggccgggctccagttccccgtaggccg 109
>ref|XM_865976.1| PREDICTED: Bos taurus similar to Histone H2A.g (H2A/g) (H2A.3) (LOC614970), mRNA Length = 447 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccg 214 ||||||||||||||||||||| ||||| Sbjct: 63 ggccgggctccagttccccgtgggccg 89
>gb|AF517875.1| Griffithsia japonica isolate Gj43 histone H2A protein mRNA, complete cds Length = 531 Score = 46.1 bits (23), Expect = 0.059 Identities = 29/31 (93%) Strand = Plus / Plus Query: 189 gccgggctccagttccccgtcggccgcatcg 219 ||||| |||||||||||||||||||| |||| Sbjct: 94 gccggtctccagttccccgtcggccgtatcg 124
>gb|AY063460.1| Helianthus tuberosus cyclin D1 (CycD1;1) mRNA, complete cds Length = 1788 Score = 46.1 bits (23), Expect = 0.059 Identities = 47/55 (85%) Strand = Plus / Plus Query: 157 cgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcgg 211 ||||||||||||| || || ||| ||||| ||||| ||||||||||||||||| Sbjct: 1250 cgaggaagaagtccgtcacaaagtccgtcaaagccggtctccagttccccgtcgg 1304
>emb|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes Length = 2597 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 gccgggctccagttccccgtcggccg 214 |||||||||||||||||||| ||||| Sbjct: 427 gccgggctccagttccccgtgggccg 452
>gb|AE010418.1| Methanopyrus kandleri AV19 section 117 of 157 of the complete genome Length = 10261 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 gaaggggaagaagggcgcggc 136 ||||||||||||||||||||| Sbjct: 9479 gaaggggaagaagggcgcggc 9459
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 ctccagttccccgtcggccgcatcg 219 |||||||||||||| |||||||||| Sbjct: 6938 ctccagttccccgttggccgcatcg 6962
>ref|XM_963991.1| PREDICTED: Tribolium castaneum similar to CG2812-PA (LOC657535), partial mRNA Length = 3949 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 ccgcatcgggcggtacctcaa 232 ||||||||||||||||||||| Sbjct: 2407 ccgcatcgggcggtacctcaa 2387
>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence Length = 116158 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 ctccagttccccgtcggccgcatcg 219 |||||||||||||| |||||||||| Sbjct: 42115 ctccagttccccgttggccgcatcg 42091
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gtcggcacgggcgcccccgtc 275 ||||||||||||||||||||| Sbjct: 3425702 gtcggcacgggcgcccccgtc 3425722
>gb|AC008834.7| Homo sapiens chromosome 5 clone CTD-2147G20, complete sequence Length = 191096 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 agcaccagccaccagagatgg 90 ||||||||||||||||||||| Sbjct: 106209 agcaccagccaccagagatgg 106189
>dbj|AB018242.1| Solanum melongena EEF20 mRNA for histone H2A-like protein, partial cds Length = 549 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 gtcaaggccgggctccagttccccgtcgg 211 ||||||||||| || |||||||||||||| Sbjct: 31 gtcaaggccggtcttcagttccccgtcgg 59
>gb|AY108339.1| Zea mays PCO070432 mRNA sequence Length = 811 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 caaggccgggctccagttccc 205 ||||||||||||||||||||| Sbjct: 173 caaggccgggctccagttccc 193
>gb|DQ214188.1| Taeniopygia guttata clone 0058P0024E05 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>gb|DQ214187.1| Taeniopygia guttata clone 0058P0044E04 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>ref|XM_429688.1| PREDICTED: Gallus gallus hypothetical gene supported by BX933556 (LOC419700), mRNA Length = 633 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcgg 211 ||||||||| |||||||||||||| Sbjct: 71 ggccgggctgcagttccccgtcgg 48
>ref|XM_425469.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427895), mRNA Length = 390 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccgggctgcagttccccgtgggccgc 90
>ref|XM_425467.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427893), mRNA Length = 390 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccgggctgcagttccccgtgggccgc 90
>ref|XM_425465.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427891), mRNA Length = 390 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccgggctgcagttccccgtgggccgc 90
>ref|XM_425459.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427885), mRNA Length = 918 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 63 ggccgggctgcagttccccgtgggccgc 90
>ref|XM_425455.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427881), mRNA Length = 534 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 207 ggccgggctgcagttccccgtgggccgc 234
>ref|XM_416195.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC417955), mRNA Length = 1220 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 893 ggccgggctgcagttccccgtgggccgc 920
>ref|XM_416193.1| PREDICTED: Gallus gallus similar to histone protein Hist2h3c1 (LOC417953), mRNA Length = 2271 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 1468 ggccgggctgcagttccccgtgggccgc 1441
>ref|XM_416192.1| PREDICTED: Gallus gallus similar to germinal histone H4 gene (LOC417952), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 1027 ggccgggctgcagttccccgtgggccgc 1000
>ref|XM_952236.1| Neurospora crassa OR74A hypothetical protein (NCU06438.1) partial mRNA Length = 2589 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gaagtcggtgacgcggtcgg 183 |||||||||||||||||||| Sbjct: 432 gaagtcggtgacgcggtcgg 413
>ref|XM_326292.1| Neurospora crassa OR74A hypothetical protein (NCU06438.1) partial mRNA Length = 2589 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gaagtcggtgacgcggtcgg 183 |||||||||||||||||||| Sbjct: 432 gaagtcggtgacgcggtcgg 413
>gb|AY812081.1| Schistosoma japonicum SJCHGC05779 protein mRNA, partial cds Length = 1040 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gccgggctccagttccccgt 208 |||||||||||||||||||| Sbjct: 14 gccgggctccagttccccgt 33
>ref|XM_545430.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488308), mRNA Length = 456 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 126 ggccgggctccagttcccggtgggccgc 153
>ref|XM_545426.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488304), mRNA Length = 588 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 210 ggccgggctccagttcccggtgggccgc 237
>ref|XM_849168.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC611496), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccggtgggccgc 90
>ref|XM_545421.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488299), mRNA Length = 387 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccggtgggccgc 90
>ref|XM_545411.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488289), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccagtgggccgc 90
>ref|XM_545400.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488278), mRNA Length = 576 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccggtgggccgc 90
>ref|XM_545394.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488272), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccggtgggccgc 90
>ref|XM_848759.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488270), mRNA Length = 462 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 132 ggccgggctccagttcccggtgggccgc 159
>ref|XM_545384.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488262), mRNA Length = 393 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 63 ggccgggctccagttcccggtgggccgc 90
>ref|XM_545376.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488254), mRNA Length = 417 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||||||||||||||| || |||||| Sbjct: 87 ggccgggctccagttcccggtgggccgc 114
>ref|XM_752558.1| Ustilago maydis 521 histone H2A (UM01504.1) partial mRNA Length = 411 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 180 tcggtcaaggccgggctccagttccccgtcgg 211 |||| |||||| || ||||||||||||||||| Sbjct: 64 tcggccaaggctggtctccagttccccgtcgg 95
>ref|XM_790704.1| PREDICTED: Strongylocentrotus purpuratus similar to CG12952-PA, isoform A (LOC591124), mRNA Length = 2184 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcaaggccgggctccagttc 203 |||||||||||||||||||| Sbjct: 1448 tcaaggccgggctccagttc 1467
>ref|XM_781074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG12952-PA, isoform A (LOC581051), mRNA Length = 2325 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcaaggccgggctccagttc 203 |||||||||||||||||||| Sbjct: 1796 tcaaggccgggctccagttc 1815
>emb|X53831.1|PCHISH2A Parsley mRNA for histone H2A Length = 556 Score = 40.1 bits (20), Expect = 3.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 150 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgg 193 ||||| || ||||||||||| ||||| |||||||| || ||||| Sbjct: 74 ggcggtccaaggaagaagtccgtgactcggtcggtgaaagccgg 117
>emb|X14730.1|CMHIST2A Duck H2A histone gene Length = 845 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 213 ggccgggctgcagttccccgtgggccgc 240
>emb|X07763.1|GGH2AB8 Chicken DNA for pCH3.5E histone H2A/H2B sequence Length = 1017 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 244 ggccgggctgcagttccccgtgggccgc 217
>emb|X07762.1|GGH2AB7 Chicken DNA for pCH22.0B histone H2A/H2B sequence Length = 751 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 127 ggccgggctgcagttccccgtgggccgc 100
>emb|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene Length = 8384 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 4994 ggccgggctgcagttccccgtgggccgc 5021 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 2450 ggccgggctgcagttccccgtgggccgc 2423
>emb|AJ494851.1|ODI494851 Oikopleura dioica partial H2A.2 gene for histone h2A.2 Length = 1947 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ctccagttccccgtcggccg 214 |||||||||||||||||||| Sbjct: 1290 ctccagttccccgtcggccg 1309
>emb|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene Length = 5705 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ctccagttccccgtcggccg 214 |||||||||||||||||||| Sbjct: 3438 ctccagttccccgtcggccg 3419
>emb|V00413.1|GGH2AX Chicken gene for histone H2A with flanking regions Length = 843 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 396 ggccgggctgcagttccccgtgggccgc 423
>gb|AY817118.1| Actinodaphne paotingensis internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 605 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cccgcgtcccgacgagcacc 75 |||||||||||||||||||| Sbjct: 19 cccgcgtcccgacgagcacc 38
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccg 207 |||||||||||||||||||| Sbjct: 1738271 ggccgggctccagttccccg 1738252
>gb|BC092032.1| Xenopus laevis hypothetical protein MGC83508, mRNA (cDNA clone MGC:84952 IMAGE:6323734), complete cds Length = 1415 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 |||||| |||||||||||||| |||||| Sbjct: 119 ggccggactccagttccccgtaggccgc 146
>gb|BC093343.1| Danio rerio MID1 interacting protein 1, mRNA (cDNA clone MGC:112497 IMAGE:7411962), complete cds Length = 1726 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ctccagttccccgtcggccg 214 |||||||||||||||||||| Sbjct: 108 ctccagttccccgtcggccg 127
>emb|BX933556.1| Gallus gallus finished cDNA, clone ChEST42h4 Length = 895 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 ggccgggctccagttccccgtcgg 211 ||||||||| |||||||||||||| Sbjct: 332 ggccgggctgcagttccccgtcgg 309
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ccggcgggccgaggaagaagtcgg 171 |||||||| ||||||||||||||| Sbjct: 4637406 ccggcggggcgaggaagaagtcgg 4637383
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcgggcaccggagccgga 113 |||||||||||||||||||| Sbjct: 1048751 cctcgggcaccggagccgga 1048770
>gb|BC018693.2| Homo sapiens casein kinase 1, gamma 2, mRNA (cDNA clone MGC:2904 IMAGE:3010717), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgggcaccggagccggagcg 116 |||||||||||||||||||| Sbjct: 112 cgggcaccggagccggagcg 131
>gb|BC018699.2| Homo sapiens casein kinase 1, gamma 2, mRNA (cDNA clone MGC:4534 IMAGE:3010717), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgggcaccggagccggagcg 116 |||||||||||||||||||| Sbjct: 112 cgggcaccggagccggagcg 131
>dbj|D11055.1|CHKH2A4H Gallus gallus gene for H2A histone, complete cds Length = 1028 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 394 ggccgggctgcagttccccgtgggccgc 421
>dbj|D11054.1|CHKH2A3H Gallus gallus gene for H2A histone, complete cds Length = 1495 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 416 ggccgggctgcagttccccgtgggccgc 443
>gb|U38933.1|GGU38933 Gallus gallus histone H2A (H2A-VIII) gene, complete cds Length = 740 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 241 ggccgggctgcagttccccgtgggccgc 268
>gb|U38932.1|GGU38932 Gallus gallus histone H2A (H2A-VII) gene, complete cds Length = 827 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 224 ggccgggctgcagttccccgtgggccgc 251
>gb|U38931.1|GGU38931 Gallus gallus histone H2A (H2A-VI) gene, complete cds Length = 743 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ggccgggctccagttccccgtcggccgc 215 ||||||||| ||||||||||| |||||| Sbjct: 86 ggccgggctgcagttccccgtgggccgc 113
>emb|AL845502.5| Mouse DNA sequence from clone RP23-395A21 on chromosome 4, complete sequence Length = 163191 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ggagcgaaggggaagaaggg 130 |||||||||||||||||||| Sbjct: 47683 ggagcgaaggggaagaaggg 47664 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,451,610 Number of Sequences: 3902068 Number of extensions: 1451610 Number of successful extensions: 30405 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29564 Number of HSP's gapped (non-prelim): 823 length of query: 280 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 258 effective length of database: 17,147,199,772 effective search space: 4423977541176 effective search space used: 4423977541176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
