| Clone Name | bast65c10 |
|---|---|
| Clone Library Name | barley_pub |
>CDI8_ARATH (P42735) Cadmium-induced protein AS8| Length = 171 Score = 83.6 bits (205), Expect = 2e-16 Identities = 41/75 (54%), Positives = 48/75 (64%) Frame = +2 Query: 206 MIIKGMLGRYERWNPVHPTXXXXXXXXXXXXXXXXXXXXXXXEVIGYVGAGCGVGFSVGI 385 MIIKG+ RYE+WNPVHPT EVIGYVGAGCGVGFSVGI Sbjct: 4 MIIKGIFRRYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFSVGI 63 Query: 386 TLAGVGVGLPQHGII 430 TLAG+G+GLP + ++ Sbjct: 64 TLAGLGIGLPTNFLL 78
>GRLF1_CANFA (P83509) Glucocorticoid receptor DNA-binding factor 1 (Rho GAP p190A)| (p190-A) Length = 1500 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +3 Query: 36 FLHSSRRCSCPSPTKSTNPRPQ-PIQTLLPPRLQ 134 FL S+ S PSP +S P PQ P+Q LLP +LQ Sbjct: 1462 FLTSTPVTSQPSPPQSPPPTPQSPMQALLPSQLQ 1495
>EMAL_DROME (Q9VUI3) Echinoderm microtubule-associated protein-like CG13466| Length = 819 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Frame = -1 Query: 148 IAPGICSRGGNRVWIGWGRGLVDLVG---------LGHEQRRLLWRKNTLVWS 17 I G R +V G GR L L GH++ LWRKN L+W+ Sbjct: 529 ILEGSLQRRFTQVVFGHGRQLWGLAAHPDDELYATAGHDKHVALWRKNKLIWT 581
>MMP11_HUMAN (P24347) Stromelysin-3 precursor (EC 3.4.24.-) (ST3) (SL-3) (Matrix| metalloproteinase-11) (MMP-11) Length = 488 Score = 29.3 bits (64), Expect = 4.3 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Frame = +3 Query: 30 VFFLHSSRRC---------SCPSPTKSTNPRPQPIQTLLPPRLQMP 140 V LH+ RR S P+P +T P+P +L PPR +P Sbjct: 38 VHHLHAERRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVP 83
>CI042_HUMAN (Q96E09) Protein C9orf42| Length = 287 Score = 29.3 bits (64), Expect = 4.3 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 195 TGGTAISGYGSGNGAGLRRAFAA 127 TGG+ G GSG G GLRR+ +A Sbjct: 16 TGGSPAEGGGSGGGGGLRRSNSA 38
>GRLF1_MOUSE (Q91YM2) Glucocorticoid receptor DNA-binding factor 1 (Fragment)| Length = 1337 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +3 Query: 36 FLHSSRRCSCPSPTKSTNPRPQ-PIQTLLPPRLQ 134 FL S+ S PSP +S P PQ P+Q LL +LQ Sbjct: 1299 FLTSTPATSQPSPPQSPPPTPQSPMQPLLSSQLQ 1332
>EGG3_SCHMA (P13396) Eggshell protein precursor (Chorion protein)| Length = 177 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 201 GCTGGTAISGYGSGNGAG 148 GCTGG GYG G G G Sbjct: 50 GCTGGDCGGGYGGGYGGG 67
>EGG2_SCHMA (P12796) Eggshell protein precursor (Chorion protein)| Length = 177 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 201 GCTGGTAISGYGSGNGAG 148 GCTGG GYG G G G Sbjct: 50 GCTGGDCGGGYGGGYGGG 67
>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid| receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A) Length = 1513 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +3 Query: 36 FLHSSRRCSCPSPTKSTNPRPQ-PIQTLLPPRL 131 FL S+ S PSP +S P PQ P+Q LLP L Sbjct: 1461 FLTSTPVTSQPSPPQSPPPTPQSPMQPLLPSPL 1493 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,175,861 Number of Sequences: 219361 Number of extensions: 589339 Number of successful extensions: 3944 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2696 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3869 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)