ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast65c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186268.1| Oryza sativa (japonica cultivar-group), mRNA 236 5e-59
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 236 5e-59
3dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 236 5e-59
4gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 0.38
5gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Canc... 44 0.38
6emb|AJ341884.1|HSA341884 Homo sapiens genomic sequence surroundi... 44 0.38
7gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.38
8gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com... 42 1.5
9gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.5
10gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome... 42 1.5
11gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, co... 42 1.5
12gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, com... 42 1.5
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
15dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AK110872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
18dbj|AK106755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
19emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chr... 42 1.5
20gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 5.9
21gb|BC097135.1| Danio rerio translocation protein 1, mRNA (cDNA c... 40 5.9
22ref|XM_956743.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
23ref|XM_958799.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
24ref|XM_327300.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
25ref|XM_330232.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
26gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.9
27emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 5.9
28emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in ... 40 5.9
29gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.9
30emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 40 5.9
31gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.9
32gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 o... 40 5.9
33ref|NM_001025530.1| Danio rerio translocation protein 1 (tloc1),... 40 5.9
34gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding pro... 40 5.9
35dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.9
36dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.9 
>ref|NM_186268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Plus

                                                                       
Query: 193 ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 252
           |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 201 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 260

                                                                       
Query: 253 gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 312
           ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 261 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 320

                                                                       
Query: 313 gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 372
           ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 321 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 380

                                                                      
Query: 373 cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 431
           |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 381 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 439
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Minus

                                                                           
Query: 193     ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 252
               |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 2256762 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 2256703

                                                                           
Query: 253     gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 312
               ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 2256702 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 2256643

                                                                           
Query: 313     gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 372
               ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2256642 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 2256583

                                                                          
Query: 373     cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 431
               |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 2256582 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 2256524
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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Minus

                                                                         
Query: 193   ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 252
             |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 30461 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 30402

                                                                         
Query: 253   gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 312
             ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 30401 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 30342

                                                                         
Query: 313   gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 372
             ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 30341 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 30282

                                                                        
Query: 373   cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 431
             |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 30281 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 30223
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 387     cgctcgccggtgtcggcgtcgg 408
               ||||||||||||||||||||||
Sbjct: 5800849 cgctcgccggtgtcggcgtcgg 5800828
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>gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 120070

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 82    ccaccaacccccgcccccaacc 103
             ||||||||||||||||||||||
Sbjct: 59657 ccaccaacccccgcccccaacc 59636
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>emb|AJ341884.1|HSA341884 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-EB9RS
          Length = 715

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 94  gcccccaaccgatccaaaccctgttg 119
           ||||||||||||||||||| ||||||
Sbjct: 610 gcccccaaccgatccaaactctgttg 635
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 346     cgtcggcgccggatgcggcgtcggat 371
               |||||||||||| |||||||||||||
Sbjct: 2146025 cgtcggcgccggctgcggcgtcggat 2146000



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 347     gtcggcgccggatgcggcgtcggat 371
               ||||||||||| |||||||||||||
Sbjct: 2162227 gtcggcgccggctgcggcgtcggat 2162203



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gctcgccggtgtcggcgtcg 407
              ||||||||||||||||||||
Sbjct: 881072 gctcgccggtgtcggcgtcg 881053
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>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence
          Length = 161504

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     tccaccaacccccgcccccaa 101
              |||||||||||||||||||||
Sbjct: 121933 tccaccaacccccgcccccaa 121953
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 337     catcggctacgtcggcgccgg 357
               |||||||||||||||||||||
Sbjct: 4142748 catcggctacgtcggcgccgg 4142768
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>gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome 14, complete sequence
          Length = 198078

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 86     caacccccgcccccaaccgatccaaaccc 114
              |||||||||||||||||| | ||||||||
Sbjct: 130715 caacccccgcccccaaccaaaccaaaccc 130687
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>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence
          Length = 161276

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   atccaccaacccccgccccca 100
            |||||||||||||||||||||
Sbjct: 7092 atccaccaacccccgccccca 7112
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>gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, complete sequence
          Length = 146833

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     atccaccaacccccgccccca 100
              |||||||||||||||||||||
Sbjct: 105728 atccaccaacccccgccccca 105748
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 155      ccgttgccgctgccgtagccg 175
                |||||||||||||||||||||
Sbjct: 13475433 ccgttgccgctgccgtagccg 13475413
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 219     ggatgctgggccggtacgagc 239
               |||||||||||||||||||||
Sbjct: 1960996 ggatgctgggccggtacgagc 1961016



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 405     tcgggctgccacagcacggc 424
               ||||||||||||||||||||
Sbjct: 3284211 tcgggctgccacagcacggc 3284192
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>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0459H02
          Length = 168230

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  ccgttgccgctgccgtagccg 175
            |||||||||||||||||||||
Sbjct: 3923 ccgttgccgctgccgtagccg 3903
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>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0428A03
          Length = 136799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   ccgttgccgctgccgtagccg 175
             |||||||||||||||||||||
Sbjct: 86857 ccgttgccgctgccgtagccg 86837
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>dbj|AK110872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-E09, full
           insert sequence
          Length = 1746

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 155 ccgttgccgctgccgtagccg 175
           |||||||||||||||||||||
Sbjct: 814 ccgttgccgctgccgtagccg 834
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>dbj|AK106755.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D06, full
           insert sequence
          Length = 998

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 155 ccgttgccgctgccgtagccg 175
           |||||||||||||||||||||
Sbjct: 694 ccgttgccgctgccgtagccg 674
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>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete
             sequence
          Length = 215157

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 86    caacccccgcccccaaccgatccaaaccc 114
             |||||||||||||||||| | ||||||||
Sbjct: 80030 caacccccgcccccaaccaaaccaaaccc 80002
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 156     cgttgccgctgccgtagccg 175
               ||||||||||||||||||||
Sbjct: 1102100 cgttgccgctgccgtagccg 1102081
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>gb|BC097135.1| Danio rerio translocation protein 1, mRNA (cDNA clone MGC:114073
           IMAGE:7438160), complete cds
          Length = 1335

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  gccccaccaaatccaccaac 89
           ||||||||||||||||||||
Sbjct: 154 gccccaccaaatccaccaac 173
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>ref|XM_956743.1| Neurospora crassa OR74A hypothetical protein (NCU07015.1) partial
            mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tgctgggccggtacgagcgg 241
            ||||||||||||||||||||
Sbjct: 1491 tgctgggccggtacgagcgg 1472
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>ref|XM_958799.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial
            mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  gggcgccttctggggcgtcg 284
            ||||||||||||||||||||
Sbjct: 2071 gggcgccttctggggcgtcg 2052
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>ref|XM_327300.1| Neurospora crassa OR74A hypothetical protein (NCU07015.1) partial
            mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tgctgggccggtacgagcgg 241
            ||||||||||||||||||||
Sbjct: 1491 tgctgggccggtacgagcgg 1472
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>ref|XM_330232.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial
            mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  gggcgccttctggggcgtcg 284
            ||||||||||||||||||||
Sbjct: 2071 gggcgccttctggggcgtcg 2052
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 338     atcggctacgtcggcgccgg 357
               ||||||||||||||||||||
Sbjct: 1126214 atcggctacgtcggcgccgg 1126195
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   cggcgggcgccttctggggcgtcg 284
             |||||||| |||||||||||||||
Sbjct: 45920 cggcgggcaccttctggggcgtcg 45943
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>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2,
             complete sequence
          Length = 249584

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    gccccaccaaatccaccaac 89
             ||||||||||||||||||||
Sbjct: 82585 gccccaccaaatccaccaac 82566
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 147     atccggccccgttgccgctg 166
               ||||||||||||||||||||
Sbjct: 1043865 atccggccccgttgccgctg 1043884
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>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2, complete
              sequence
          Length = 228024

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     gccccaccaaatccaccaac 89
              ||||||||||||||||||||
Sbjct: 148108 gccccaccaaatccaccaac 148089
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     gcggtgccgccggtgcagcc 201
               ||||||||||||||||||||
Sbjct: 3524432 gcggtgccgccggtgcagcc 3524451
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>gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 of the complete
            genome
          Length = 12776

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  atcggctacgtcggcgccgg 357
            ||||||||||||||||||||
Sbjct: 9457 atcggctacgtcggcgccgg 9438
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>ref|NM_001025530.1| Danio rerio translocation protein 1 (tloc1), mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  gccccaccaaatccaccaac 89
           ||||||||||||||||||||
Sbjct: 154 gccccaccaaatccaccaac 173
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>gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding protein CP29 (CipCp29) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1118

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 cgttgccgctgccgtagccg 175
           ||||||||||||||||||||
Sbjct: 93  cgttgccgctgccgtagccg 74
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     ccgaggtcatcggctacgtc 349
               ||||||||||||||||||||
Sbjct: 6375432 ccgaggtcatcggctacgtc 6375413
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 394     cggtgtcggcgtcgggctgc 413
               ||||||||||||||||||||
Sbjct: 4213011 cggtgtcggcgtcgggctgc 4213030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,594,760
Number of Sequences: 3902068
Number of extensions: 2594760
Number of successful extensions: 59550
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58647
Number of HSP's gapped (non-prelim): 900
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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