ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65c07 |
|---|---|
| Clone Library Name | barley_pub |
>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2| Length = 209 Score = 178 bits (451), Expect = 6e-45 Identities = 88/123 (71%), Positives = 96/123 (78%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 MVSLK+QKRLA+SV+KCGKGKVWLDPNE +ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 EAK+KGRHSGYGKR+GTREARLPTKI KYRE+KKID+HMY Sbjct: 61 SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120 Query: 421 HDM 429 HDM Sbjct: 121 HDM 123
>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1| Length = 214 Score = 175 bits (444), Expect = 4e-44 Identities = 88/123 (71%), Positives = 94/123 (76%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 MVSLKLQKRLA+SV+KCGKGKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 AK KGRHSGYGKR+GTREARLPTK+ KYRE KKIDKHMY Sbjct: 61 SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120 Query: 421 HDM 429 HDM Sbjct: 121 HDM 123
>RL19C_ARATH (P49693) 60S ribosomal protein L19-3| Length = 208 Score = 173 bits (438), Expect = 2e-43 Identities = 88/123 (71%), Positives = 94/123 (76%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 MVSLKLQKRLASSVLKCGK KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 AK+KGRHSGYGKR+GTREARLPTK+ KYRE KKID+HMY Sbjct: 61 SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120 Query: 421 HDM 429 HDM Sbjct: 121 HDM 123
>RL19_DROME (P36241) 60S ribosomal protein L19| Length = 203 Score = 150 bits (380), Expect = 9e-37 Identities = 71/123 (57%), Positives = 89/123 (72%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M SLKLQKRLA+SVL+CGK KVWLDPNE+NEI+ NSRQNIRKL+KDG II+KP + Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 EA++KGRH G+GKR+GT AR+PTK+ KYR++KKID+H+Y Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120 Query: 421 HDM 429 HD+ Sbjct: 121 HDL 123
>RL19_CAEEL (O02639) 60S ribosomal protein L19| Length = 198 Score = 145 bits (365), Expect = 5e-35 Identities = 70/123 (56%), Positives = 88/123 (71%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M +L+LQKRLAS+VLKCGK +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP + Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 EA++KGRH+GYGKRRGT AR+P K +YR+AKK+DKH+Y Sbjct: 61 FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLY 120 Query: 421 HDM 429 H++ Sbjct: 121 HEL 123
>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein| V14) (22 kDa calmodulin-binding protein) Length = 186 Score = 141 bits (356), Expect = 6e-34 Identities = 68/123 (55%), Positives = 85/123 (69%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 MVSLKLQKRLA+S+LKCGKG+VW+DPNE+ +++MANSR N+R+L+ GFI+RKP + Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 AK+ GRH G G R GTREARLP+KI KYREAKKIDKH Y Sbjct: 61 SRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSY 120 Query: 421 HDM 429 ++ Sbjct: 121 REL 123
>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19| Length = 197 Score = 141 bits (355), Expect = 7e-34 Identities = 70/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_RAT (P84100) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_PONPY (Q5RB99) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_MOUSE (P84099) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_HUMAN (P84098) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19| Length = 196 Score = 141 bits (355), Expect = 7e-34 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)| Length = 192 Score = 140 bits (354), Expect = 1e-33 Identities = 66/121 (54%), Positives = 85/121 (70%) Frame = +1 Query: 67 SLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 246 +L+ QKRLA+SVLKCGK KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP + Sbjct: 2 NLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFR 61 Query: 247 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHD 426 AK+ GRH+GYGKR+GT EAR+P+ + KYRE+ KIDKH+YH Sbjct: 62 IRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHT 121 Query: 427 M 429 + Sbjct: 122 L 122
>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19| Length = 196 Score = 140 bits (353), Expect = 1e-33 Identities = 70/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YREAKKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19| Length = 196 Score = 138 bits (348), Expect = 5e-33 Identities = 69/123 (56%), Positives = 83/123 (67%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 421 HDM 429 H + Sbjct: 121 HSL 123
>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)| Length = 188 Score = 129 bits (323), Expect = 4e-30 Identities = 62/119 (52%), Positives = 82/119 (68%) Frame = +1 Query: 67 SLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 246 +L+ QKRLA+SV+ GK KVWLDPNE +EI+ ANSR IRKLVK+G I++K + Sbjct: 2 NLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSR 61 Query: 247 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYH 423 ++K++GRHSGYGKR+GTREARLP+++ KYR+A KIDKH+YH Sbjct: 62 TRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH 120
>RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)| Length = 62 Score = 101 bits (252), Expect = 7e-22 Identities = 49/54 (90%), Positives = 52/54 (96%) Frame = +1 Query: 70 LKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKI 231 LKLQKRLA+S LKCGKGKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KI Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKI 54
>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e| Length = 151 Score = 95.5 bits (236), Expect = 5e-20 Identities = 45/120 (37%), Positives = 72/120 (60%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M +LK+Q+R+A+ +LKCG+ ++W+DP V++++ A +R++IR+L+K+G I +KP K Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 E K+KGRH G G R+G + AR+ K K +E KKID+ Y Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120
>RL19_PYRHO (O59437) 50S ribosomal protein L19e| Length = 150 Score = 95.1 bits (235), Expect = 6e-20 Identities = 46/120 (38%), Positives = 73/120 (60%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M +LK+Q+R+A+ +LKCG+ +VW+DP +V+E++ A +R++IR+L+K+G I +KP + Sbjct: 1 MNTLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 E K+KGRH G G R+G + AR+ K K +E KKID+ Y Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTY 120
>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)| Length = 150 Score = 91.7 bits (226), Expect = 7e-19 Identities = 42/120 (35%), Positives = 71/120 (59%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M +LK+Q+R+A+ +LKCG+ ++W+DP +++++ A +R++I++L+K+G I +KP K Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 E K+KGRH G G R+G + AR+ K K + KKID+ Y Sbjct: 61 YRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTY 120
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 84.3 bits (207), Expect = 1e-16 Identities = 40/123 (32%), Positives = 68/123 (55%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 ++ + +Q+R+A+ +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K +K Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISS 62 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 E ++KGR G G RRG AR P K + R++ KID+ +Y Sbjct: 63 ARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVY 122 Query: 421 HDM 429 + Sbjct: 123 RKL 125
>RL19_ARCFU (O28372) 50S ribosomal protein L19e| Length = 149 Score = 82.4 bits (202), Expect = 4e-16 Identities = 39/92 (42%), Positives = 59/92 (64%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 ++ L LQ+RLA+SVLKCG+ +VW DP + +I+ A ++Q+IR+L++ G I RKP Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSR 62 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTK 336 K+KGR G+G R+G + AR+P K Sbjct: 63 ARINKRKLQKRKGRRRGHGSRKGAKGARMPRK 94
>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)| Length = 149 Score = 80.9 bits (198), Expect = 1e-15 Identities = 39/122 (31%), Positives = 65/122 (53%) Frame = +1 Query: 64 VSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXX 243 + + Q+R+A++VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K +K Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSA 60 Query: 244 XXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYH 423 E K+KG+ G G RRG + AR P K + RE +KI++ Y Sbjct: 61 RKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYR 120 Query: 424 DM 429 + Sbjct: 121 KL 122
>RL19_METTH (O26129) 50S ribosomal protein L19e| Length = 148 Score = 79.7 bits (195), Expect = 3e-15 Identities = 39/122 (31%), Positives = 65/122 (53%) Frame = +1 Query: 64 VSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXX 243 ++L QKRLA+ +LK G ++W+DP ++E+S A +R +++L+KDG I KP+K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSY 60 Query: 244 XXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYH 423 + K+KGR G G +G + AR P K + R+ ++I+K Y Sbjct: 61 RSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYR 120 Query: 424 DM 429 + Sbjct: 121 KL 122
>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)| Length = 148 Score = 58.5 bits (140), Expect = 6e-09 Identities = 34/120 (28%), Positives = 54/120 (45%) Frame = +1 Query: 70 LKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXXX 249 L QKRLA+ VL GK +VW +P +I+ A +R+++R+LV +G I K +K Sbjct: 3 LSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRA 62 Query: 250 XXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDM 429 + + G G G R+G AR +K + R+ + Y D+ Sbjct: 63 RERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDL 122
>RL19E_HALSA (Q9HPB6) 50S ribosomal protein L19e| Length = 149 Score = 56.2 bits (134), Expect = 3e-08 Identities = 32/88 (36%), Positives = 46/88 (52%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M L QKRLA+ VL G+ +VW DP+ +EI+ A +R++IR+LV DG I + + Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREAR 324 + G G G R+G AR Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGAR 88
>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e| Length = 155 Score = 55.5 bits (132), Expect = 5e-08 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%) Frame = +1 Query: 73 KLQKRLASSVLKCGKGKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 246 + Q+RLA+ +L G+ ++W+ DP EI A ++ ++R L+K G I P+K Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63 Query: 247 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 420 ++KGR G G+R+G ARL K R+ + ID+ Y Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTY 121
>RL19_SULAC (O05639) 50S ribosomal protein L19e| Length = 150 Score = 52.8 bits (125), Expect = 3e-07 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 4/124 (3%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 240 M +LQ+RLA+ + G + +P + E+ A +R++I+KL+K+ +I P++ Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKR---G 57 Query: 241 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKY----REAKKID 408 E K K R G G++ G+R+ + + +Y R+ ID Sbjct: 58 ISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVID 117 Query: 409 KHMY 420 KH Y Sbjct: 118 KHTY 121
>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e| Length = 151 Score = 50.1 bits (118), Expect = 2e-06 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 1/124 (0%) Frame = +1 Query: 61 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDG-FIIRKPQKIXX 237 M +LK QKRLA+S+ G ++ + + + ++ + +R IR L+KDG I+ K I Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG 60 Query: 238 XXXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHM 417 + K G R+G + AR +K R+ K ID+H Sbjct: 61 GRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHT 120 Query: 418 YHDM 429 Y ++ Sbjct: 121 YREL 124
>S35B2_CAEEL (Q8MXJ9) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) Length = 425 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 194 TSFRMFC-RELAMEISLTSLGSSQTLPLPHLRTLEARRFCSFSDTI 60 T F +FC R +A+ +SL L T PH+ L + SFS+TI Sbjct: 147 TQFLIFCNRIVALVLSLMILAKDWTKQPPHVPPLYVHSYTSFSNTI 192
>POLS_MOUSE (Q6PB75) DNA polymerase sigma (EC 2.7.7.7)| Length = 542 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 17/69 (24%) Frame = -1 Query: 327 EPSLPGTPTLTISRVTALLLGLMC-----------------PPCTRPGVDLLRLPDDETI 199 EPS P T LT+S + LL PPCT P V L T+ Sbjct: 334 EPSSPYTQRLTLSLSSPQLLSSGSSASSVSSLSGSDIDSDTPPCTTPSVYQFSLQAPTTL 393 Query: 198 LYQLPDVLP 172 + LP LP Sbjct: 394 MASLPTALP 402
>SPG20_MOUSE (Q8R1X6) Spartin| Length = 671 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +3 Query: 93 LERPQVRQGQGLARPQ*GQRDLHGQLTAKHPEAGK 197 +ERPQ R+ QG A G+RD+ Q+ + P AGK Sbjct: 635 VERPQ-RESQGGATSTEGRRDIGKQVEEEKPGAGK 668
>PUR4_ARATH (Q9M8D3) Probable phosphoribosylformylglycinamidine synthase,| chloroplast precursor (EC 6.3.5.3) (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1387 Score = 28.5 bits (62), Expect = 7.1 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -3 Query: 316 PWYPYAYHIQSDGPSAW 266 PWYP ++ ++ GPS W Sbjct: 1357 PWYPTSWDVEKAGPSPW 1373 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,133,466 Number of Sequences: 219361 Number of extensions: 1017008 Number of successful extensions: 2812 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2699 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2807 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
