ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65c06 |
|---|---|
| Clone Library Name | barley_pub |
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 118 bits (295), Expect = 9e-27 Identities = 58/79 (73%), Positives = 65/79 (82%) Frame = +1 Query: 235 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKI 414 + + P DFDGFQK MV KGTTTL+FIF +GV+VAADSRASMGGYISS +V+KI Sbjct: 32 SFDLPRTTDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 91 Query: 415 IEINPYMLGTMAGGAADCQ 471 IEINPYMLGTMAGGAADCQ Sbjct: 92 IEINPYMLGTMAGGAADCQ 110
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 117 bits (294), Expect = 1e-26 Identities = 57/79 (72%), Positives = 66/79 (83%) Frame = +1 Query: 235 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKI 414 + + P +FDGFQK K M+ + KGTTTL+FIF GV+VAADSRASMGGYISS +V+KI Sbjct: 32 SFDLPRTKEFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKI 91 Query: 415 IEINPYMLGTMAGGAADCQ 471 IEINPYMLGTMAGGAADCQ Sbjct: 92 IEINPYMLGTMAGGAADCQ 110
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 117 bits (292), Expect = 2e-26 Identities = 58/79 (73%), Positives = 64/79 (81%) Frame = +1 Query: 235 ALEFPTCDDFDGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKI 414 + + P DFDGFQK MV KGTTTL+FIF GV+VAADSRASMGGYISS +V+KI Sbjct: 30 SFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKI 89 Query: 415 IEINPYMLGTMAGGAADCQ 471 IEINPYMLGTMAGGAADCQ Sbjct: 90 IEINPYMLGTMAGGAADCQ 108
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 85.9 bits (211), Expect = 5e-17 Identities = 41/53 (77%), Positives = 47/53 (88%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADC 468 GTTTL+F F GVIVAADSRA+ G YI+S TV+K+IEINPY+LGTMAGGAADC Sbjct: 4 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADC 56
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 85.9 bits (211), Expect = 5e-17 Identities = 41/53 (77%), Positives = 47/53 (88%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADC 468 GTTTL+F F GVIVAADSRA+ G YI+S TV+K+IEINPY+LGTMAGGAADC Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC 56
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 85.1 bits (209), Expect = 8e-17 Identities = 41/53 (77%), Positives = 47/53 (88%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADC 468 GTTTL+F F GVIVAADSRA+ G YI+S TV+K+IEINPY+LGTMAGGAADC Sbjct: 4 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC 56
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 82.4 bits (202), Expect = 5e-16 Identities = 37/54 (68%), Positives = 47/54 (87%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTTTL+F F G+IVA DSRA+ G +++S TV+K+IEINP++LGTMAGGAADCQ Sbjct: 75 GTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQ 128
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 81.6 bits (200), Expect = 9e-16 Identities = 40/68 (58%), Positives = 48/68 (70%) Frame = +1 Query: 268 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTM 447 G + K + GTTTL+F F GVIVA DSRAS G YI++ V K+IEINPY+LGTM Sbjct: 58 GDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTM 117 Query: 448 AGGAADCQ 471 +G AADCQ Sbjct: 118 SGCAADCQ 125
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 80.9 bits (198), Expect = 2e-15 Identities = 37/65 (56%), Positives = 48/65 (73%) Frame = +1 Query: 277 KATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGG 456 K ++ GTTTL+F + G++V DSRAS G I+S TV+K+IEINPY+LGT+AGG Sbjct: 50 KNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGG 109 Query: 457 AADCQ 471 AADCQ Sbjct: 110 AADCQ 114
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 80.1 bits (196), Expect = 3e-15 Identities = 38/53 (71%), Positives = 45/53 (84%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADC 468 GTTTL+F F GV+VA DSRA+ G YI+S TV+K+IEINP +LGTMAGGAADC Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADC 107
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 79.7 bits (195), Expect = 3e-15 Identities = 39/68 (57%), Positives = 47/68 (69%) Frame = +1 Query: 268 GFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTM 447 G + + GTTTL+F F GVIVA DSRA+ G YISS + K+IEINPY+LGTM Sbjct: 58 GGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTM 117 Query: 448 AGGAADCQ 471 +G AADCQ Sbjct: 118 SGCAADCQ 125
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 79.0 bits (193), Expect = 6e-15 Identities = 38/54 (70%), Positives = 43/54 (79%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTTTL+F F GVI A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ Sbjct: 72 GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQ 125
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 78.6 bits (192), Expect = 8e-15 Identities = 42/69 (60%), Positives = 50/69 (72%) Frame = +1 Query: 265 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGT 444 +G + K MV+ GTTTL+F F GVIVA DSRA+ G YISS V K+IEINP +LGT Sbjct: 60 NGEKNIRKEMVH---GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGT 116 Query: 445 MAGGAADCQ 471 M+G AADCQ Sbjct: 117 MSGCAADCQ 125
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/55 (41%), Positives = 34/55 (61%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 KGTTT+ I D VI+A D RAS+G ++ +K+ +I+ Y+ T+AG D Q Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQ 59
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 49.3 bits (116), Expect = 5e-06 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Frame = +1 Query: 289 AMVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAA 462 +M+ K KGTTT+ + GV++A + RA+MG +I+S +KI +I M T AG Sbjct: 2 SMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVG 61 Query: 463 DCQ 471 D Q Sbjct: 62 DAQ 64
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 48.5 bits (114), Expect = 9e-06 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = +1 Query: 298 NNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 N KGTTT+ GV+ A + RASMG I+ KI +I+ ++ T+AG AD Q Sbjct: 5 NTLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQ 62
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 48.5 bits (114), Expect = 9e-06 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%) Frame = +1 Query: 292 MVNNK--KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 M N+K KGTTT+ + G+++A++ RA+MG +I+S T +K+ +I+ + T AG D Sbjct: 1 MDNDKYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGD 60 Query: 466 CQ 471 Q Sbjct: 61 AQ 62
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/55 (45%), Positives = 35/55 (63%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 KGTTT+ + GVI+AAD RAS G ++++ VRK++ I + T AG AD Q Sbjct: 13 KGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQ 67
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV++ ADSR + G YI++ K+ I+ ++ +G AAD Q Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQ 86
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/53 (41%), Positives = 34/53 (64%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 KGTTT+ + +GV++AAD+RAS+G I + V KI +I+ ++ AG D Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGD 61
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 43.5 bits (101), Expect = 3e-04 Identities = 21/54 (38%), Positives = 32/54 (59%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV++ ADSR + G YI++ K+ I+ + +G AAD Q Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQ 87
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/53 (41%), Positives = 32/53 (60%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 KGTTT+ + GV++AAD RAS+G I + V KI +I+ ++ AG D Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGD 61
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 KGTTT+ + GV++AAD RAS+G + + V KI +I+ ++ AG D Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGD 61
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/56 (37%), Positives = 33/56 (58%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 + GTT + + GVI+AADSR +MG YI++ K+ ++ + +G AAD Q Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQ 77
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ F+ GV++ ADSR + G YI++ K+ I+ ++ +G AAD Q Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQ 86
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 42.7 bits (99), Expect = 5e-04 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +1 Query: 274 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAG 453 QK KA K GTT + IF GVI+ AD+RA+ G ++ KI + P + AG Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86 Query: 454 GAADCQ 471 AAD + Sbjct: 87 TAADTE 92
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 42.7 bits (99), Expect = 5e-04 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +1 Query: 274 QKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAG 453 QK KA K GTT + IF GVI+ AD+RA+ G ++ KI + P + AG Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86 Query: 454 GAADCQ 471 AAD + Sbjct: 87 TAADTE 92
>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K GTT ++ FD GV++ +DSR S G + + + K+ ++ + ++G AAD Q Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQ 71
>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K GTT ++ FD GV++ +DSR S G + + + K+ ++ + ++G AAD Q Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQ 71
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%) Frame = +1 Query: 262 FDGFQKATKAMVNN-------KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIE 420 FD +Q+ N+ GTT + F+ GV++AAD+R++ G ++ K+ Sbjct: 6 FDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHR 65 Query: 421 INPYMLGTMAGGAADCQ 471 I+P + AG AAD + Sbjct: 66 ISPKIWCAGAGTAADTE 82
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT + ++ GV++ ADSR S G Y+++ KI ++ + +G AAD Q Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQ 66
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ ++ F GVI+ ADSR + G YI++ K+ ++ + +G AAD Q Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQ 72
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT + ++ GV++ ADSR S G Y+++ KI ++ + +G AAD Q Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQ 65
>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQ 73
>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 39.7 bits (91), Expect = 0.004 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQ 73
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 39.7 bits (91), Expect = 0.004 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K GTT ++ F+ GV++ +DSR S G + + + K+ ++ + ++G AAD Q Sbjct: 16 KTGTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQ 71
>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQ 73
>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQ 73
>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQ 73
>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) (LMP-2d) Length = 219 Score = 39.3 bits (90), Expect = 0.005 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV+V +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQ 73
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 38.1 bits (87), Expect = 0.012 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = +1 Query: 265 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGT 444 D +K K K GTT ++ G+++ AD+RA+ G ++ KI I+P + Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87 Query: 445 MAGGAAD 465 AG AAD Sbjct: 88 GAGTAAD 94
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 38.1 bits (87), Expect = 0.012 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = +1 Query: 265 DGFQKATKAMVNNKKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGT 444 D +K K K GTT ++ G+++ AD+RA+ G ++ KI I+P + Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87 Query: 445 MAGGAAD 465 AG AAD Sbjct: 88 GAGTAAD 94
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 38.1 bits (87), Expect = 0.012 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K GTT +F GVI+ AD+RA+ ++ + KI I P + AG AAD + Sbjct: 37 KTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAE 92
>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 37.7 bits (86), Expect = 0.015 Identities = 18/54 (33%), Positives = 31/54 (57%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT ++ FD GV++ +DSR S G + + K+ ++ + ++G AAD Q Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 37.0 bits (84), Expect = 0.026 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 K GTT ++ G+++ AD+RA+ G ++ KI I+P + AG AAD Sbjct: 41 KTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD 94
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 37.0 bits (84), Expect = 0.026 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K GTT +F GVI+ AD+RA+ ++ + KI I P + AG AAD + Sbjct: 37 KTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTE 92
>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit| PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4) Length = 266 Score = 36.6 bits (83), Expect = 0.034 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Frame = +1 Query: 292 MVNNKK----GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGA 459 MVN ++ GT+ +S +D GVI+AAD+ S G + V ++I + + ++G Sbjct: 31 MVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDI 90 Query: 460 ADCQ 471 +D Q Sbjct: 91 SDMQ 94
>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 242 Score = 35.4 bits (80), Expect = 0.075 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L FD GVI+AAD S G + +I+++N + +G AD Q Sbjct: 31 GTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQ 84
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 35.0 bits (79), Expect = 0.099 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L +D GV++AAD+ S G + ++ ++N +L +G AD Q Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQ 110
>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) Length = 264 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L FD GV++AAD S G + +I+ +N + +G AD Q Sbjct: 53 GTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQ 106
>HSLV_COXBU (Q83A95) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 181 Score = 34.3 bits (77), Expect = 0.17 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 +GTT LS + V++ D + SMG I RK+ + N ++ AGG AD Sbjct: 5 RGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTAD 58
>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (RN3) Length = 263 Score = 34.3 bits (77), Expect = 0.17 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L FD GV++AAD S G + +I+ +N + +G AD Q Sbjct: 52 GTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQ 105
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 33.1 bits (74), Expect = 0.37 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GTT + I +++ AD+RA+ G I+ +K+ I+P + AG AAD + Sbjct: 35 GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTE 88
>PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 154 Score = 32.7 bits (73), Expect = 0.49 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L F+ GV++AAD S G + +I+ +N + +G AD Q Sbjct: 53 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQ 106
>PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (HSN3) (HsBPROS26) Length = 264 Score = 32.7 bits (73), Expect = 0.49 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 GT+ L F+ GV++AAD S G + +I+ +N + +G AD Q Sbjct: 53 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQ 106
>HSLV_RICCN (Q92II7) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 182 Score = 32.3 bits (72), Expect = 0.64 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 GTT L ++ +I+AAD + S G + T RK+ I N ++ AG AD Sbjct: 9 GTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTAD 61
>HSLV_WOLPM (P61479) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 184 Score = 32.3 bits (72), Expect = 0.64 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +1 Query: 298 NNKK-GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEIN-PYMLGTMAGGAAD 465 NNK GTT LS DK V+V D + S+G + +K+ ++ ++ AG AD Sbjct: 6 NNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATAD 63
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 32.0 bits (71), Expect = 0.83 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K+GTT L ++GV++ D R + I ++ K+ +I+ ++ AG AD + Sbjct: 34 KRGTTALGIKVEEGVVLGVDKRVT-SKLIEPESIEKVYQIDTHIGAATAGLVADAR 88
>HSLV_PHOLL (Q7MYC2) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 175 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++ D +A+MG + VRK+ + N ++ AGG AD Sbjct: 1 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTAD 52
>HSLV_VIBPA (Q87T20) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 182 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++A D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTAD 52
>HSLV_RICTY (Q68X53) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 182 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 GTT L ++ +I+AAD + S G + T RK+ I N ++ AG AD Sbjct: 9 GTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTAD 61
>HSLV_VIBCH (Q9KNQ6) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 184 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++A D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTAD 52
>HSLV_VIBVY (Q7MH57) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 183 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++A D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTAD 52
>HSLV_VIBVU (Q8DCP3) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 183 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++A D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTAD 52
>PSA5_YEAST (P32379) Proteasome component PUP2 (EC 3.4.25.1) (Macropain subunit| PUP2) (Proteinase YSCE subunit PUP2) (Multicatalytic endopeptidase complex subunit PUP2) Length = 260 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K G+T + +GV++ + RA+ + S ++ KI+EI+ ++ M+G AD + Sbjct: 32 KLGSTAIGIATKEGVVLGVEKRAT-SPLLESDSIEKIVEIDRHIGCAMSGLTADAR 86
>PSMA2_HALMA (Q5V1D4) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 244 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K+GT ++ + GV++AAD R + I ++ KI EI+ ++ AG AD + Sbjct: 33 KRGTASVGVRTEDGVVIAAD-RHARSPLIERDSIEKIHEIDSHVGVASAGHVADAR 87
>HSLV_RICPR (Q9ZDK9) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 182 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 GTT L + +I+AAD + S G + T RK+ I N ++ AG AD Sbjct: 9 GTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTAD 61
>HSLV_PHOPR (Q6LVI2) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 174 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V++A D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTAD 52
>PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K+G T + +GVI+ AD R + + T+ KI +I+ ++ +G AD + Sbjct: 32 KRGATAIGIKCKEGVILIADKRVG-SKLLEADTIEKIYKIDEHICAATSGLVADAR 86
>PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 KKG+T L F GV++ +D + I ++ KI I+ Y+ +G AD + Sbjct: 32 KKGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADAR 86
>PSA2_TRYBB (Q9U793) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S| proteasome subunit alpha-2) Length = 231 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 KGTT L GV++AA+ + + S T+ K+ ++ ++ T +G DC+ Sbjct: 29 KGTTALGVKATDGVVIAAEKKTT-SPLADSLTLHKVFALDDHVGCTYSGIGPDCR 82
>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 259 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/56 (26%), Positives = 30/56 (53%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 ++GTT + GV++A D R + I ++ KI +I+ +++ +G AD + Sbjct: 34 RRGTTAVGIKCKDGVVLAVDRRIT-SKLIDVSSIEKIFQIDDHIVAATSGLVADAR 88
>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25| Length = 447 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +1 Query: 22 RKKGRDRPRTRGKVRGSKQRKSSLHRLRRFSPHADD 129 R K RDR R R + RG + R R R S H D+ Sbjct: 166 RDKDRDRDRERRRDRGDRDRSRDRDRSHRRSRHEDE 201
>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 KKG+T L F GV++ +D + I ++ KI I+ Y+ +G AD + Sbjct: 32 KKGSTALGLKFSNGVLLISDKKI-RSKLIEQNSLEKIQLIDDYVAAVTSGLVADAR 86
>HSLV_PASMU (P57969) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 175 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V+V D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTAD 52
>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) (20S proteasome alpha subunit) Length = 261 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 ++GTT + GV++A D R + + ++ KI +I+ ++ +G AD + Sbjct: 33 RRGTTAIGIACKDGVVLAVDRRIT-SKLVKIRSIEKIFQIDDHVAAATSGLVADAR 87
>HSLV_HAEIN (P43772) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 174 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 313 TTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 TT +S + V+V D + S+G + RK+ + N +L AGG AD Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTAD 52
>HSLV_BRUSU (Q8FY11) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 184 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINP-YMLGTMAGGAAD 465 GTT ++ D V++A D + S+G + RK+ I ++ AG AD Sbjct: 11 GTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATAD 63
>HSLV_BRUME (Q8YE31) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 184 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINP-YMLGTMAGGAAD 465 GTT ++ D V++A D + S+G + RK+ I ++ AG AD Sbjct: 11 GTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATAD 63
>HSLV_CHRVO (Q7P113) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 183 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 310 GTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEIN-PYMLGTMAGGAAD 465 GTT +S + V + D + ++G + T RKI +++ +L AGG AD Sbjct: 6 GTTIVSVRRGERVALGGDGQVTLGNIVIKATARKIRKLHGGKVLAGFAGGTAD 58
>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 258 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAAD 465 KKG T+L ++GV++AA+ R +G + + KI +I+ ++ AG D Sbjct: 36 KKGWTSLGIKTNEGVVIAAEKR-FIGPLVDIDDIDKIYKIDDHIGVAFAGMGGD 88
>HSLV_DESVH (Q72BQ7) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 181 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 307 KGTTTLSFIFDKGVIVAADSRASMG-GYISSXTVRKIIEI-NPYMLGTMAGGAAD 465 KGTT L+ +GV +A D + +MG + + RK+ + N ++ AG AD Sbjct: 4 KGTTILAVRGAQGVTIAGDGQVTMGQSIVMKHSARKVRRLYNGRVVAGFAGSTAD 58
>PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 248 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = +1 Query: 304 KKGTTTLSFIFDKGVIVAADSRASMGGYISSXTVRKIIEINPYMLGTMAGGAADCQ 471 K+GTT+L +G+++ D R + + ++ KI +I+ ++ +G AD + Sbjct: 33 KRGTTSLGVKSKEGIVLVVDKRPT-SKLVEPKSIEKIFQIDEHIGAATSGLVADAR 87
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -3 Query: 465 ISSTSSHGSQHVGINLDDFSHSXRRYVAAHAGPGVGGDDDALVEDEGERGGP 310 ++ SHG H + D S R+V A G GG+++ E+E E P Sbjct: 146 LAEHGSHGHGHEEEDEDVISSERPRHVLRRAPRGHGGEEEGEEEEEEEEVSP 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,421,495 Number of Sequences: 219361 Number of extensions: 523469 Number of successful extensions: 1951 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 1908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1951 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
