ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit mRNA, complete cds Length = 860 Score = 624 bits (315), Expect = e-176 Identities = 341/350 (97%) Strand = Plus / Plus Query: 124 gacgacgcgatgatccccaacctctccgccctcgagaaccacttcggcgcggccgccgcc 183 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 gacgacgcgatgattcccaacctctccgccctcgagaaccacttcggcgccgccgccgcc 60 Query: 184 ggcggcgacgacttcgccggcctcttctccgccgacgccgccggccagctcgccctcgag 243 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 61 ggcagcgacgacttcgccggcctcttctccgccgacgccgccgaccagctcgccctcgag 120 Query: 244 ttccccacctgcgacgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaac 303 |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 121 ttccccacctgcaacgacttcgatgggttccagaaggcgaccaaggagatggtgaacaac 180 Query: 304 aagaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgac 240 Query: 364 tcccgggccagcatgggcggctacatatcttcgcanactgtgagaaaaatcatcgagatt 423 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 241 tcccgggccagcatgggcggctacatatcttcgcaaactgtgaggaaaatcatcgagatt 300 Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 350
>dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E06, full insert sequence Length = 1099 Score = 262 bits (132), Expect = 9e-67 Identities = 282/331 (85%), Gaps = 6/331 (1%) Strand = Plus / Plus Query: 146 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 205 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 70 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 129 Query: 206 tcttctccgccgacgccgccggccagctcgccctcgagttccccacctgc---gacgact 262 ||||| ||||| ||||| | | || |||| | ||| ||||||||||| | ||||| Sbjct: 130 tcttcggcgccggcgccgac---ctgcccgccatggagctccccacctgccccgccgact 186 Query: 263 tcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacgc 322 |||||||||||||||||| |||||||| |||| |||| |||||||||| || ||||||| Sbjct: 187 tcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgc 246 Query: 323 tctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggcg 382 || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 247 tcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcg 306 Query: 383 gctacatatcttcgcanactgtgagaaaaatcatcgagattaatccctacatgctgggaa 442 | |||||||||||||| |||||||| ||||| || || || ||||| |||||||| |||| Sbjct: 307 gatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaa 366 Query: 443 ccatggctggaggtgctgctgattgccaatt 473 | ||||| ||||||||||||||||| ||||| Sbjct: 367 caatggcaggaggtgctgctgattgtcaatt 397
>dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C04, full insert sequence Length = 1099 Score = 262 bits (132), Expect = 9e-67 Identities = 282/331 (85%), Gaps = 6/331 (1%) Strand = Plus / Plus Query: 146 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 205 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 70 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 129 Query: 206 tcttctccgccgacgccgccggccagctcgccctcgagttccccacctgc---gacgact 262 ||||| ||||| ||||| | | || |||| | ||| ||||||||||| | ||||| Sbjct: 130 tcttcggcgccggcgccgac---ctgcccgccatggagctccccacctgccccgccgact 186 Query: 263 tcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacgc 322 |||||||||||||||||| |||||||| |||| |||| |||||||||| || ||||||| Sbjct: 187 tcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgc 246 Query: 323 tctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggcg 382 || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 247 tcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcg 306 Query: 383 gctacatatcttcgcanactgtgagaaaaatcatcgagattaatccctacatgctgggaa 442 | |||||||||||||| |||||||| ||||| || || || ||||| |||||||| |||| Sbjct: 307 gatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaa 366 Query: 443 ccatggctggaggtgctgctgattgccaatt 473 | ||||| ||||||||||||||||| ||||| Sbjct: 367 caatggcaggaggtgctgctgattgtcaatt 397
>dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099E18, full insert sequence Length = 1217 Score = 256 bits (129), Expect = 6e-65 Identities = 194/216 (89%) Strand = Plus / Plus Query: 258 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 317 ||||||||||||||||||||||| |||||||| |||| |||| |||||||||| || || Sbjct: 187 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 246 Query: 318 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 377 ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 247 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 306 Query: 378 gggcggctacatatcttcgcanactgtgagaaaaatcatcgagattaatccctacatgct 437 |||||| |||||||||||||| |||||||| ||||| || || || ||||| |||||||| Sbjct: 307 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 366 Query: 438 gggaaccatggctggaggtgctgctgattgccaatt 473 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 367 tggaacaatggcaggaggtgctgctgattgtcaatt 402
>dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mRNA for beta 5 subunit of 20S proteasome, complete cds Length = 1233 Score = 256 bits (129), Expect = 6e-65 Identities = 194/216 (89%) Strand = Plus / Plus Query: 258 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 317 ||||||||||||||||||||||| |||||||| |||| |||| |||||||||| || || Sbjct: 181 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 240 Query: 318 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 377 ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 241 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 300 Query: 378 gggcggctacatatcttcgcanactgtgagaaaaatcatcgagattaatccctacatgct 437 |||||| |||||||||||||| |||||||| ||||| || || || ||||| |||||||| Sbjct: 301 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 360 Query: 438 gggaaccatggctggaggtgctgctgattgccaatt 473 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 361 tggaacaatggcaggaggtgctgctgattgtcaatt 396
>gb|BT016601.1| Zea mays clone Contig434 mRNA sequence Length = 1072 Score = 226 bits (114), Expect = 5e-56 Identities = 200/229 (87%) Strand = Plus / Plus Query: 245 tccccacctgcgacgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaaca 304 |||||| |||||||||||||||||| |||||| ||| ||||||| |||||||| || | Sbjct: 180 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 239 Query: 305 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 364 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 240 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 299 Query: 365 cccgggccagcatgggcggctacatatcttcgcanactgtgagaaaaatcatcgagatta 424 || |||||||||||||||| || ||||| || || || ||||| ||||| || || || | Sbjct: 300 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 359 Query: 425 atccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 360 atccttacatgctggggacaatggctggaggtgctgctgattgccaatt 408
>gb|AY103704.1| Zea mays PCO130904 mRNA sequence Length = 1115 Score = 226 bits (114), Expect = 5e-56 Identities = 200/229 (87%) Strand = Plus / Plus Query: 245 tccccacctgcgacgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaaca 304 |||||| |||||||||||||||||| |||||| ||| ||||||| |||||||| || | Sbjct: 205 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 264 Query: 305 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 364 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 265 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 324 Query: 365 cccgggccagcatgggcggctacatatcttcgcanactgtgagaaaaatcatcgagatta 424 || |||||||||||||||| || ||||| || || || ||||| ||||| || || || | Sbjct: 325 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 384 Query: 425 atccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 385 atccttacatgctggggacaatggctggaggtgctgctgattgccaatt 433
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 262 ttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacg 321 ||||||||||||||||||| |||||||| |||| |||| |||||||||| || |||||| Sbjct: 2772703 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 2772644 Query: 322 ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 381 ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2772643 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 2772584 Query: 382 ggctacatat 391 || ||||||| Sbjct: 2772583 ggatacatat 2772574 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 392 cttcgcanactgtgagaaaaatcatcgagattaatccctacatgctgggaaccatggctg 451 ||||||| |||||||| ||||| || || || ||||| |||||||| ||||| ||||| | Sbjct: 2771656 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcag 2771597 Query: 452 gaggtgctgctgattgccaatt 473 |||||||||||||||| ||||| Sbjct: 2771596 gaggtgctgctgattgtcaatt 2771575 Score = 44.1 bits (22), Expect = 0.41 Identities = 64/78 (82%) Strand = Plus / Minus Query: 146 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 205 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 2772933 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 2772874 Query: 206 tcttctccgccgacgccg 223 ||||| ||||| ||||| Sbjct: 2772873 tcttcggcgccggcgccg 2772856 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 343 ggcgtcatcgtcgccgccgactcccgggccagca 376 |||||| || ||||||||||||||||| |||||| Sbjct: 2093420 ggcgtcgtcctcgccgccgactcccggaccagca 2093387 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgccgacgccgccggccagctcgc 236 |||| ||||||||||||||||||| Sbjct: 30322709 cgcccacgccgccggccagctcgc 30322686
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 262 ttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacg 321 ||||||||||||||||||| |||||||| |||| |||| |||||||||| || |||||| Sbjct: 16184 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 16125 Query: 322 ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 381 ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 16124 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 16065 Query: 382 ggctacatat 391 || ||||||| Sbjct: 16064 ggatacatat 16055 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 392 cttcgcanactgtgagaaaaatcatcgagattaatccctacatgctgggaaccatggctg 451 ||||||| |||||||| ||||| || || || ||||| |||||||| ||||| ||||| | Sbjct: 15137 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcag 15078 Query: 452 gaggtgctgctgattgccaatt 473 |||||||||||||||| ||||| Sbjct: 15077 gaggtgctgctgattgtcaatt 15056 Score = 44.1 bits (22), Expect = 0.41 Identities = 64/78 (82%) Strand = Plus / Minus Query: 146 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 205 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 16414 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 16355 Query: 206 tcttctccgccgacgccg 223 ||||| ||||| ||||| Sbjct: 16354 tcttcggcgccggcgccg 16337
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 68214 attaatccgtacatgcttggaactatggctggaggtgctgctgattgccaatt 68266
>gb|AY683448.1| Lemna minor 26S proteasome beta subunit mRNA, partial cds Length = 349 Score = 69.9 bits (35), Expect = 7e-09 Identities = 97/118 (82%) Strand = Plus / Plus Query: 356 ccgccgactcccgggccagcatgggcggctacatatcttcgcanactgtgagaaaaatca 415 ||||||| |||||||| |||||||| || || || ||||| || | |||| ||||||| Sbjct: 63 ccgccgattcccgggctagcatgggaggatatatctcttctcagtcggtgaagaaaatca 122 Query: 416 tcgagattaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 | ||||| || ||||||||||| || || ||||||||||| || || ||||||||||| Sbjct: 123 tagagatcaacccctacatgcttgggacaatggctggaggcgccgcagattgccaatt 180
>emb|AJ291741.1|NTA291741 Nicotiana tabacum partial mRNA for putative beta5 proteasome subunit (b5 gene) Length = 524 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 409 aaaatcatcgagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 468 |||||||| || || ||||| || ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 40 aaaatcattgaaataaatccgtatatgcttggaacaatggctgggggtgctgctgactgc 99 Query: 469 caatt 473 ||||| Sbjct: 100 caatt 104
>gb|AY550121.1| Saussurea medusa 20S proteasome beta subunit E mRNA, partial cds Length = 498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 364 tcccgggccagcatgggcggctacatatcttcgcanactgtgagaaaaatcatcgagatt 423 ||||| || |||||||| ||||| || || || || |||||| || ||||| || ||| Sbjct: 267 tcccgagctagcatgggaggctatatctcatctcaatctgtgaagaagatcattgaaatt 326 Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgcca 470 |||||||| ||| |||| || ||||||||||| ||||| |||||||| Sbjct: 327 aatccctatatgttgggtacaatggctggaggagctgccgattgcca 373
>ref|NM_101176.2| Arabidopsis thaliana PBE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G13060 (PBE1) mRNA, complete cds Length = 1147 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 394 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 443
>gb|AY150473.1| Arabidopsis thaliana proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 856 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 283 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 332
>emb|Y13695.1|ATY13695 Arabidopsis thaliana mRNA for proteasome subunit prce Length = 1031 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 309 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 358
>gb|AY050871.1| Arabidopsis thaliana putative proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 376 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 425
>gb|AF348579.1| Arabidopsis thaliana clone C00191 (e) putative proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 825 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 283 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 332
>emb|BX814144.1|CNS0AC2D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 958 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 295 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 344
>emb|BX815505.1|CNS0ABBC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZF03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 376 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 425
>emb|BX841869.1|CNS09Y42 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 321 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 370
>gb|AY089104.1| Arabidopsis thaliana clone 33591 mRNA, complete sequence Length = 1090 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 395 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 444
>dbj|AK175091.1| Ciona intestinalis cDNA, clone:cixxx00142, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 439 ggaaccatggctggaggtgctgctgattgc 468 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>dbj|AK175090.1| Ciona intestinalis cDNA, clone:cixxx00141, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 439 ggaaccatggctggaggtgctgctgattgc 468 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>dbj|AK174277.1| Ciona intestinalis cDNA, clone:cicl019o10, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 439 ggaaccatggctggaggtgctgctgattgc 468 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 26001 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 26050
>gb|AF043536.1|AF043536 Arabidopsis thaliana 20S proteasome beta subunit PBE1 (PBE1) mRNA, complete cds Length = 1031 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 424 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| || ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 309 aatccttatatgctcggtacaatggctggaggagctgctgattgccaatt 358
>ref|NM_113541.2| Arabidopsis thaliana endopeptidase/ threonine endopeptidase AT3G26340 mRNA, complete cds Length = 1108 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 388 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaatt 440
>ref|XM_387062.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG06886.1) partial mRNA Length = 852 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 434 tgctgggaaccatggctggaggtgctgctgattgcca 470 ||||||||||||||||||| |||||||| || ||||| Sbjct: 326 tgctgggaaccatggctggtggtgctgcagactgcca 362
>gb|DQ450069.1| Arachis hypogaea clone 6A4R2G 20S proteasome beta subunit mRNA, partial cds Length = 802 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 129 attaatccatatatgcttggaacaatggccggaggtgccgcggattgccaatt 181
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcg 199 ||||||||||||||||||||||||| Sbjct: 145174 gccgccgccggcggcgacgacttcg 145198 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cgccgccggcggcgacgacttcgc 200 |||||||||||||| ||||||||| Sbjct: 145189 cgccgccggcggcggcgacttcgc 145166
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcg 199 ||||||||||||||||||||||||| Sbjct: 211652 gccgccgccggcggcgacgacttcg 211676 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cgccgccggcggcgacgacttcgc 200 |||||||||||||| ||||||||| Sbjct: 211667 cgccgccggcggcggcgacttcgc 211644
>gb|AY125569.1| Arabidopsis thaliana AT3g26340/F20C19_6 mRNA, complete cds Length = 822 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 280 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaatt 332
>gb|AF439846.1|AF439846 Arabidopsis thaliana AT3g26340/F20C19_6 mRNA, complete cds Length = 1053 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 333 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaatt 385
>gb|AY085678.1| Arabidopsis thaliana clone 16981 mRNA, complete sequence Length = 1105 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 389 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaatt 441
>dbj|AP001298.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F20C19 Length = 71184 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 421 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 15760 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaatt 15708
>gb|AY656247.1| Oryza sativa (japonica cultivar-group) 17.7 kDa low temperature induced protein mRNA, complete cds Length = 1043 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 334 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 381
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 13258179 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 13258226 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 |||||||||||||| || ||||||||||||| Sbjct: 26129254 cgcggccgccgccgacgccgacgacttcgcc 26129224
>ref|XM_745627.1| Aspergillus fumigatus Af293 proteasome component Pre2 (Afu6g08310) partial mRNA Length = 891 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 437 tgggaaccatggctggaggtgctgctgattgccaat 472 |||| ||||||||||| |||||||| |||||||||| Sbjct: 371 tgggtaccatggctggtggtgctgcggattgccaat 406
>dbj|AB110172.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPB022 Length = 943 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 279 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 13254954 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 13255001 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 |||||||||||||| || ||||||||||||| Sbjct: 26220563 cgcggccgccgccgacgccgacgacttcgcc 26220533
>dbj|AK068753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E09, full insert sequence Length = 1292 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 509 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 556
>dbj|AK062176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D01, full insert sequence Length = 994 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 319 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 366
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 222 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 61662 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 61615
>ref|NM_189817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 ||||||||||| ||||||||||| ||||||| Sbjct: 106 cgcggccgccggcggcggcgacgtcttcgcc 76
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.10 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcg 199 ||||||||||||||||||| ||||| Sbjct: 1529432 gccgccgccggcggcgacgmcttcg 1529456 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cgccgccggcggcgacgacttcgc 200 |||||||||||||| ||||||||| Sbjct: 1529447 cgccgccggcggcggcgacttcgc 1529424
>ref|XM_537370.2| PREDICTED: Canis familiaris similar to proteasome beta 5 subunit (LOC480246), mRNA Length = 1081 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctgg 452 ||||| ||||||||| ||||||| ||||||||||| Sbjct: 358 gagatcaatccctacctgctgggcaccatggctgg 392
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 |||||||||||||| || ||||||||||||| Sbjct: 27296 cgcggccgccgccgacgccgacgacttcgcc 27326
>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5' end of a novel gene, the Sfrs1 gene for arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1 gene for vascular endothelial zinc finger 1, a novel gene (2210416O15Rik), the gene for the likely ortholog of H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the Mrps23 gene for mitochondrial ribosomal protein S23 and two CpG islands, complete sequence Length = 223276 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 gaaagaaaggaagagacagaccg 45 ||||||||||||||||||||||| Sbjct: 56093 gaaagaaaggaagagacagaccg 56115
>ref|NM_001037612.1| Bos taurus proteasome (prosome, macropain) subunit, beta type, 5 (PSMB5), mRNA Length = 1385 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 468 ||||| || |||||| ||||||| ||||||||||| ||||| || |||||| Sbjct: 637 gagatcaacccctacctgctgggcaccatggctgggggtgcagcggattgc 687
>gb|BC110039.1| Bos taurus cDNA clone MGC:134464 IMAGE:8048388, complete cds Length = 1385 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 468 ||||| || |||||| ||||||| ||||||||||| ||||| || |||||| Sbjct: 637 gagatcaacccctacctgctgggcaccatggctgggggtgcagcggattgc 687
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 ||||||||||| ||||||||||| ||||||| Sbjct: 25416076 cgcggccgccggcggcggcgacgtcttcgcc 25416046 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgccgccggcggcgacgac 195 |||||||||||||||||||| Sbjct: 19474033 ccgccgccggcggcgacgac 19474052
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 ||||||||||| ||||||||||| ||||||| Sbjct: 109166 cgcggccgccggcggcggcgacgtcttcgcc 109136
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 ||||||||||| ||||||||||| ||||||| Sbjct: 39793 cgcggccgccggcggcggcgacgtcttcgcc 39763
>dbj|AK104971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H09, full insert sequence Length = 851 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 |||||||||||||| || ||||||||||||| Sbjct: 138 cgcggccgccgccgacgccgacgacttcgcc 108
>dbj|AK073152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011D07, full insert sequence Length = 826 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcgacgacttcgcc 201 |||||||||||||| || ||||||||||||| Sbjct: 169 cgcggccgccgccgacgccgacgacttcgcc 139
>ref|XM_483676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggc 204 ||||||||||||||||||||| ||||||| Sbjct: 574 gccgccgccggcggcgacgaccgcgccggc 603
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gcggccgccgccggcggcgacg 193 |||||||||||||||||||||| Sbjct: 55093 gcggccgccgccggcggcgacg 55072
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagacaga 42 |||||||||||||||||||||| Sbjct: 144839 aagaaagaaaggaagagacaga 144860
>emb|CR734153.2|CNS0GT94 Tetraodon nigroviridis full-length cDNA Length = 585 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 333 gagatcaacccctacctgctgggcaccatggctggagg 370
>emb|CR733451.2|CNS0GSPM Tetraodon nigroviridis full-length cDNA Length = 1122 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 321 gagatcaacccctacctgctgggcaccatggctggagg 358
>emb|CR727187.1|CNS0GO1L Tetraodon nigroviridis full-length cDNA Length = 1046 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 279 gagatcaacccctacctgctgggcaccatggctggagg 316
>emb|CR726086.2|CNS0GN70 Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 327 gagatcaacccctacctgctgggcaccatggctggagg 364
>emb|CR724930.2|CNS0GMAW Tetraodon nigroviridis full-length cDNA Length = 1119 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 319 gagatcaacccctacctgctgggcaccatggctggagg 356
>emb|CR718720.2|CNS0GHIE Tetraodon nigroviridis full-length cDNA Length = 1110 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 313 gagatcaacccctacctgctgggcaccatggctggagg 350
>emb|CR687751.2|CNS0FTMB Tetraodon nigroviridis full-length cDNA Length = 1120 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 313 gagatcaacccctacctgctgggcaccatggctggagg 350
>emb|CR663774.2|CNS0FB50 Tetraodon nigroviridis full-length cDNA Length = 1111 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 308 gagatcaacccctacctgctgggcaccatggctggagg 345
>emb|CR659418.2|CNS0F7S0 Tetraodon nigroviridis full-length cDNA Length = 805 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 316 gagatcaacccctacctgctgggcaccatggctggagg 353
>emb|CR657851.2|CNS0F6KH Tetraodon nigroviridis full-length cDNA Length = 1102 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggagg 455 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 314 gagatcaacccctacctgctgggcaccatggctggagg 351
>ref|XM_500920.1| Yarrowia lipolytica CLIB122, YALI0B15224g predicted mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 tgctgggaaccatggctggagg 455 |||||||||||||||||||||| Sbjct: 326 tgctgggaaccatggctggagg 347
>gb|AF078727.2| Rangiferine herpesvirus 1 strain Salla 82 glycoprotein B gene, complete cds Length = 3065 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 169 ggcgcggccgccgccggcggcg 190 |||||||||||||||||||||| Sbjct: 490 ggcgcggccgccgccggcggcg 469
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgccg 226 |||||||||||||| ||||||||||| Sbjct: 137258 cggcctcttctccgacgacgccgccg 137283 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 201 cggcctcttctccgccgacgccgccg 226 |||||||||||||| ||||||||||| Sbjct: 107344 cggcctcttctccgacgacgccgccg 107319
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gcggccgccgccggcggcgacg 193 |||||||||||||||||||||| Sbjct: 18657217 gcggccgccgccggcggcgacg 18657196 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 15873079 cgcggccgccgccggcggcga 15873099 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cgccggcctcttctccgccg 217 |||||||||||||||||||| Sbjct: 16506739 cgccggcctcttctccgccg 16506720 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgc 224 ||||||||||||| |||||||||| Sbjct: 15290882 cggcctcttctcctccgacgccgc 15290905 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 ggcgcggccgccgccggcggcgac 192 |||||||||||||||| ||||||| Sbjct: 14758386 ggcgcggccgccgccgccggcgac 14758409
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgacttcgccggc 204 ||||||||||||||||||||| ||||||| Sbjct: 27595578 gccgccgccggcggcgacgaccgcgccggc 27595549 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgccgacgccgccggccagctcgc 236 ||||| |||||||||||||||||| Sbjct: 21591854 cgccgccgccgccggccagctcgc 21591831
>gb|AY772189.1| Oryza sativa (japonica cultivar-group) glucosamine-6-phosphate acetyltransferase (GNA1) mRNA, complete cds Length = 604 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 gcggccgccgccggcggcgacg 193 |||||||||||||||||||||| Sbjct: 38 gcggccgccgccggcggcgacg 59
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagacaga 42 |||||||||||||||||||||| Sbjct: 3931 aagaaagaaaggaagagacaga 3952
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 343 ggcgtcatcgtcgccgccgactcccgggccagca 376 |||||| || ||||||||||||||||| |||||| Sbjct: 114282 ggcgtcgtcctcgccgccgactcccggaccagca 114249
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgccg 226 |||||||||||||| ||||||||||| Sbjct: 430 cggcctcttctccgacgacgccgccg 455
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgacttcgccggc 204 ||||||||||||||||||||| ||||||| Sbjct: 77868 gccgccgccggcggcgacgaccgcgccggc 77839
>dbj|AK105338.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F06, full insert sequence Length = 1246 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgacttcgccggc 204 ||||||||||||||||||||| ||||||| Sbjct: 727 gccgccgccggcggcgacgaccgcgccggc 756
>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full insert sequence Length = 999 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 343 ggcgtcatcgtcgccgccgactcccgggccagca 376 |||||| || ||||||||||||||||| |||||| Sbjct: 218 ggcgtcgtcctcgccgccgactcccggaccagca 251
>dbj|AK063214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D10, full insert sequence Length = 737 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 gcggccgccgccggcggcgacg 193 |||||||||||||||||||||| Sbjct: 34 gcggccgccgccggcggcgacg 55
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 tgctgggaaccatggctggagg 455 |||||||||||||||||||||| Sbjct: 2028054 tgctgggaaccatggctggagg 2028075
>emb|AL732552.8| Mouse DNA sequence from clone RP23-145O14 on chromosome 4, complete sequence Length = 203332 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 23 gaaagaaaggaagagacagaccgagaacaa 52 |||||||||||||||| ||| ||||||||| Sbjct: 102154 gaaagaaaggaagagagagagcgagaacaa 102125
>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences Length = 15141 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgccg 226 |||||||||||||| ||||||||||| Sbjct: 5682 cggcctcttctccgacgacgccgccg 5707
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 201 cggcctcttctccgccgacgccgccg 226 |||||||||||||| ||||||||||| Sbjct: 6634 cggcctcttctccgacgacgccgccg 6609
>gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, complete sequence Length = 210051 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 321 gctctccttcatcttcgacaagggc 345 |||||||||||||||| |||||||| Sbjct: 171205 gctctccttcatcttctacaagggc 171181
>ref|XM_475257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 990 gccgccgccggcggcgacgac 970
>ref|XM_464303.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 46 cgcggccgccgccggcggcga 26
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aaggggaccaccacgctctcc 327 ||||||||||||||||||||| Sbjct: 13188 aaggggaccaccacgctctcc 13168
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 147854 gccgccgccggcggcgacgac 147874
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcgacgac 195 ||||||||||||||| ||||||||| Sbjct: 110866 cgcggccgccgccggaggcgacgac 110890
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gcgcggccgccgccggcggcg 190 ||||||||||||||||||||| Sbjct: 2555510 gcgcggccgccgccggcggcg 2555530
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcgacgac 195 ||||||||||||||| ||||||||| Sbjct: 10682 cgcggccgccgccggaggcgacgac 10706
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 2254109 gccgccgccggcggcgacgac 2254089
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gcgcggccgccgccggcggcg 190 ||||||||||||||||||||| Sbjct: 3767782 gcgcggccgccgccggcggcg 3767802
>ref|XM_709731.1| Candida albicans SC5314 hypothetical protein (CaO19.2233), mRNA Length = 858 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 atggctggaggtgctgctgattgccaatt 473 |||||||| |||||||||||||| ||||| Sbjct: 352 atggctggtggtgctgctgattgtcaatt 380
>ref|XM_709671.1| Candida albicans SC5314 hypothetical protein (CaO19.9775), mRNA Length = 858 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 445 atggctggaggtgctgctgattgccaatt 473 |||||||| |||||||||||||| ||||| Sbjct: 352 atggctggtggtgctgctgattgtcaatt 380
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 90431 gccgccgccggcggcgacgac 90451
>gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome 15, complete sequence Length = 176829 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 21 aagaaagaaaggaagagacagaccgagaa 49 |||||||||||||||||| |||| ||||| Sbjct: 70428 aagaaagaaaggaagagagagacagagaa 70400
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gaaagaaaggaagagacagac 43 ||||||||||||||||||||| Sbjct: 43915 gaaagaaaggaagagacagac 43895
>emb|AL390121.6| Human DNA sequence from clone RP11-147C23 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 150396 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gaaagaaaggaagagacagac 43 ||||||||||||||||||||| Sbjct: 141085 gaaagaaaggaagagacagac 141105
>emb|AL109843.25|HSDJ763G1 Human DNA sequence from clone RP4-763G1 on chromosome 1p31.2-32.1 Contains the 5' end of the gene for interleukin-23 receptor (IL23R), complete sequence Length = 114713 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 agaaagaaaggaagagacaga 42 ||||||||||||||||||||| Sbjct: 73617 agaaagaaaggaagagacaga 73597
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gcgcggccgccgccggcggcg 190 ||||||||||||||||||||| Sbjct: 3508120 gcgcggccgccgccggcggcg 3508140
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gaaagaaaggaagagacagac 43 ||||||||||||||||||||| Sbjct: 96145 gaaagaaaggaagagacagac 96165
>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 118235 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gaaagaaaggaagagacagac 43 ||||||||||||||||||||| Sbjct: 1626 gaaagaaaggaagagacagac 1606
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 agaaagaaaggaagagacaga 42 ||||||||||||||||||||| Sbjct: 112691 agaaagaaaggaagagacaga 112671
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence Length = 195335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gaaagaaaggaagagacagac 43 ||||||||||||||||||||| Sbjct: 34799 gaaagaaaggaagagacagac 34779
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 1572791 gccgccgccggcggcgacgac 1572811
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcgacgac 195 ||||||||||||||| ||||||||| Sbjct: 17951200 cgcggccgccgccggaggcgacgac 17951224 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcggcga 191 |||||| ||||||||||||||||| Sbjct: 3350909 cggcgccgccgccgccggcggcga 3350932
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 20834630 gccgccgccggcggcgacgac 20834650 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcggccgccgccggcggcga 191 |||||||||||||||||||| Sbjct: 27267022 gcggccgccgccggcggcga 27267041 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggccgccgccggcggcgacg 193 |||||||||||||||||||| Sbjct: 3127478 ggccgccgccggcggcgacg 3127459
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 3955851 cgcggccgccgccggcggcga 3955871 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 22627001 gccgccgccggcggcgacga 22626982 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 22010677 cgcggccgccgccggcggcg 22010696 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 18105445 gccgccgccggcggcgacga 18105426
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggcgcggccgccgccggcggc 189 ||||||||||||||||||||| Sbjct: 1806099 ggcgcggccgccgccggcggc 1806119 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ccgccgacgccgccggccag 231 |||||||||||||||||||| Sbjct: 6701050 ccgccgacgccgccggccag 6701031 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggccgccgccggcggcgacg 193 |||||||||||||||||||| Sbjct: 3995151 ggccgccgccggcggcgacg 3995170
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 36205 cgcggccgccgccggcggcga 36225
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 2517 cgcggccgccgccggcggcga 2537
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 154322 cgcggccgccgccggcggcga 154342
>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7 Length = 80117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agaaagaaaggaagagacaga 42 ||||||||||||||||||||| Sbjct: 5385 agaaagaaaggaagagacaga 5405
>dbj|AK104973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B03, full insert sequence Length = 994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 581 cgcggccgccgccggcggcga 601
>dbj|AK072558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I21, full insert sequence Length = 916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcga 191 ||||||||||||||||||||| Sbjct: 594 cgcggccgccgccggcggcga 614
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 cgacgccgccggccagctcgc 236 ||||||||||||||||||||| Sbjct: 1433873 cgacgccgccggccagctcgc 1433853
>dbj|AK067448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107N09, full insert sequence Length = 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacgac 195 ||||||||||||||||||||| Sbjct: 509 gccgccgccggcggcgacgac 489
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcgacgac 195 ||||||||||||||| ||||||||| Sbjct: 18043991 cgcggccgccgccggaggcgacgac 18044015 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcggcga 191 |||||| ||||||||||||||||| Sbjct: 3359614 cggcgccgccgccgccggcggcga 3359637
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 aaggggaccaccacgctctcc 327 ||||||||||||||||||||| Sbjct: 193548 aaggggaccaccacgctctcc 193528
>ref|XM_482642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgccgacgccgccggccagctcgc 236 ||||| |||||||||||||||||| Sbjct: 181 cgccgccgccgccggccagctcgc 158
>ref|XM_466433.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 299 gccgccgccggcggcgacga 280
>gb|DQ214027.1| Taeniopygia guttata clone 0058P0034B02 ankyrin-like protein variant 2-like mRNA, complete sequence Length = 1038 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 578 ggccagcatgggcggctaca 597
>gb|DQ214026.1| Taeniopygia guttata clone 0058P0001C03 ankyrin-like protein variant 2-like mRNA, complete sequence Length = 1038 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 578 ggccagcatgggcggctaca 597
>gb|DQ214025.1| Taeniopygia guttata clone 0058P0045H05 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>gb|DQ214024.1| Taeniopygia guttata clone 0058P0016G03 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>gb|DQ214023.1| Taeniopygia guttata clone 0058P0052B06 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>ref|XM_466373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 63 cgcggccgccgccggcggcg 44
>ref|XM_465886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 498 gccgccgccggcggcgacga 479
>ref|NM_196945.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBa0079L16.3), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 220 cgcggccgccgccggcggcg 201
>ref|XM_478359.1| Oryza sativa (japonica cultivar-group), mRNA Length = 489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgccgccggcggcgacgac 195 |||||||||||||||||||| Sbjct: 325 ccgccgccggcggcgacgac 344
>gb|BT017486.1| Zea mays clone EL01N0412G05.c mRNA sequence Length = 1255 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttctccgccgacgccgccg 226 |||||||||||||||||||| Sbjct: 98 cttctccgccgacgccgccg 79
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggccgccgccggcggcgacg 193 |||||||||||||||||||| Sbjct: 5195 ggccgccgccggcggcgacg 5176
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggccgccgccggcggcgacg 193 |||||||||||||||||||| Sbjct: 114722 ggccgccgccggcggcgacg 114703
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 cggcgcggccgccgccggcggcga 191 |||||| ||||||||||||||||| Sbjct: 63385 cggcgccgccgccgccggcggcga 63362
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcggccgccgccggcggcga 191 |||||||||||||||||||| Sbjct: 141990 gcggccgccgccggcggcga 142009
>ref|XM_369576.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05888.4) partial mRNA Length = 1200 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cgccgccggcggcgacgact 196 |||||||||||||||||||| Sbjct: 78 cgccgccggcggcgacgact 97
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 acttcggcgcggccgccgcc 183 |||||||||||||||||||| Sbjct: 806053 acttcggcgcggccgccgcc 806072
>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence Length = 221662 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 135320 aagaaagaaaggaagagaca 135339
>ref|XM_675572.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7395.2), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 aaggaagagacagaccgaga 48 |||||||||||||||||||| Sbjct: 378 aaggaagagacagaccgaga 359
>ref|XM_455453.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08228g predicted mRNA Length = 858 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 442 accatggctggaggtgctgctgattgccaatt 473 |||||||| || |||||||||||||| ||||| Sbjct: 346 accatggccggtggtgctgctgattgtcaatt 377
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggcgtcatcgtcgccgccga 362 |||||||||||||||||||| Sbjct: 2726293 ggcgtcatcgtcgccgccga 2726312
>gb|AC175749.2| Pan troglodytes BAC clone CH251-1124N9 from chromosome y, complete sequence Length = 176979 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 agaaagaaaggaagagacagaccgagaa 49 ||||||||||| |||||||||| ||||| Sbjct: 95447 agaaagaaagggagagacagacagagaa 95474 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 agaaagaaaggaagagacagaccgagaa 49 ||||||||||| |||||||||| ||||| Sbjct: 94605 agaaagaaagggagagacagacagagaa 94632
>gb|AY518886.1| Brassica napus putative proteasome 20S beta5 subunit mRNA, partial cds Length = 449 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 418 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatt 473 ||||| ||||| || ||||| || || ||||||||||| |||||||| ||||||| Sbjct: 49 gagatcaatccttatatgcttggtacaatggctggaggagctgctgaccgccaatt 104
>ref|XM_859995.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 6 (LOC476662), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 570 ggccagcatgggcggctaca 589
>ref|XM_859974.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 5 (LOC476662), mRNA Length = 975 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 525 ggccagcatgggcggctaca 544
>ref|XM_859956.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 4 (LOC476662), mRNA Length = 870 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 420 ggccagcatgggcggctaca 439
>ref|XM_533866.2| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 1 (LOC476662), mRNA Length = 939 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggccagcatgggcggctaca 388 |||||||||||||||||||| Sbjct: 489 ggccagcatgggcggctaca 508
>gb|AC002291.1| Arabidopsis thaliana chromosome I BAC F22K20 genomic sequence, complete sequence Length = 96642 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tcttcttcggccgcaagaaagaaa 30 ||||||||||| |||||||||||| Sbjct: 30132 tcttcttcggctgcaagaaagaaa 30109
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 103404 aagaaagaaaggaagagaca 103423
>gb|AC093627.4| Homo sapiens BAC clone RP11-90P13 from 7, complete sequence Length = 179269 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 93186 aagaaagaaaggaagagaca 93205
>gb|AC093666.4| Homo sapiens BAC clone RP11-482G13 from 7, complete sequence Length = 157816 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 105821 aagaaagaaaggaagagaca 105840
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cgccggcctcttctccgccg 217 |||||||||||||||||||| Sbjct: 2314286 cgccggcctcttctccgccg 2314305
>emb|BX063853.1|CNS09LFL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45DF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1001 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccagaaggcgaccaaggcg 291 |||||||||||||||||||| Sbjct: 285 tccagaaggcgaccaaggcg 304
>emb|BX060118.1|CNS09IJU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40BE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1047 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccagaaggcgaccaaggcg 291 |||||||||||||||||||| Sbjct: 1028 tccagaaggcgaccaaggcg 1047
>emb|BX054899.1|CNS09EIV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC33BB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccagaaggcgaccaaggcg 291 |||||||||||||||||||| Sbjct: 604 tccagaaggcgaccaaggcg 623
>emb|BX046530.1|CNS0982E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20AH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 947 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tccagaaggcgaccaaggcg 291 |||||||||||||||||||| Sbjct: 664 tccagaaggcgaccaaggcg 645
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 442 accatggctggaggtgctgctgattgccaatt 473 |||||||| || |||||||||||||| ||||| Sbjct: 771090 accatggccggtggtgctgctgattgtcaatt 771059
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gcgcggccgccgccggcggcgacg 193 |||||||||||||||||| ||||| Sbjct: 289748 gcgcggccgccgccggcgtcgacg 289725
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 123134 gccgccgccggcggcgacga 123115
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tgatccccaacctctccgcc 153 |||||||||||||||||||| Sbjct: 58084 tgatccccaacctctccgcc 58065
>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a PDZ domain containing guanine (Pdzgef1) pseudogene, a tubulin alpha 4 (Tuba4) pseudogene , an olfactory receptor pseudogene, a novel pseudogene and the 3' end of a novel gene, complete sequence Length = 108424 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaagaaaggaagagacagac 43 |||||||||||||||||||| Sbjct: 59028 aaagaaaggaagagacagac 59047
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcggcgcggccgccgccggcggcg 190 ||||| |||||||||||||||||| Sbjct: 42416 tcggcccggccgccgccggcggcg 42393
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ctccgccgacgccgccggcc 229 |||||||||||||||||||| Sbjct: 3631226 ctccgccgacgccgccggcc 3631245 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 2311947 gccgccgccggcggcgacga 2311966
>gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185259 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 38394 aagaaagaaaggaagagaca 38375
>gb|AE011860.1| Xanthomonas axonopodis pv. citri str. 306, section 238 of 469 of the complete genome Length = 12040 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cggcggcgacgacttcgccg 202 |||||||||||||||||||| Sbjct: 2075 cggcggcgacgacttcgccg 2094
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccggcggcgacgacttcgccgg 203 ||||||||||||||||| |||||| Sbjct: 3109805 cgccggcggcgacgactgcgccgg 3109782 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 ggcggcgacgacttcgccggcctc 207 |||||||||||||||||| ||||| Sbjct: 309601 ggcggcgacgacttcgcccgcctc 309624
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 542552 gccgccgccggcggcgacga 542533
>gb|AC108218.3| Homo sapiens BAC clone RP11-717K11 from 4, complete sequence Length = 138344 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 agaaagaaaggaagagacagaccgagaa 49 |||||||||| ||||||||||| ||||| Sbjct: 48491 agaaagaaagaaagagacagacagagaa 48464
>gb|AC093614.4| Homo sapiens PAC clone RP1-164D18 from 7, complete sequence Length = 72666 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 24159 aagaaagaaaggaagagaca 24178
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 3836566 gccgccgccggcggcgacga 3836547 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ctccgccgacgccgccggcc 229 |||||||||||||||||||| Sbjct: 2300684 ctccgccgacgccgccggcc 2300665
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 acttcggcgcggccgccgccggcg 187 |||||||||||||||| ||||||| Sbjct: 2415208 acttcggcgcggccgctgccggcg 2415185
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tgatccccaacctctccgcc 153 |||||||||||||||||||| Sbjct: 27789414 tgatccccaacctctccgcc 27789395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 16834537 cgcggccgccgccggcggcg 16834556
>gb|AC124016.3| Homo sapiens BAC clone RP11-127B20 from 4, complete sequence Length = 102218 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gaaagaaaggaagagacaga 42 |||||||||||||||||||| Sbjct: 5307 gaaagaaaggaagagacaga 5288
>gb|AC069513.28| Homo sapiens 3 BAC RP11-171N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174097 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcgccggcctcttctccgcc 216 |||||||||||||||||||| Sbjct: 63815 tcgccggcctcttctccgcc 63834
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 gccgacgccgccggccagctcgcc 237 |||||||| ||||||||||||||| Sbjct: 144301 gccgacgctgccggccagctcgcc 144278
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 18989 cgcggccgccgccggcggcg 19008
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 4031942 cgcggccgccgccggcggcg 4031923 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcg 187 |||||||||||||||||||| Sbjct: 2260212 cggcgcggccgccgccggcg 2260231
>gb|AF240584.1|AF240584 Homo sapiens clone 7ptel159c74t7c76t7c121t7c15t3c25t3 sequence Length = 1601 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 1326 aagaaagaaaggaagagaca 1345
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgccgccggcggcgacgac 195 |||||||||||||||||||| Sbjct: 163571 ccgccgccggcggcgacgac 163590
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 59299 cgcggccgccgccggcggcg 59318
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 ggcgcggccgccgccggcggcgac 192 ||||||||||||| |||||||||| Sbjct: 991592 ggcgcggccgccgtcggcggcgac 991615
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgacgccgccggccagctcg 235 |||||||||||||||||||| Sbjct: 3808224 cgacgccgccggccagctcg 3808205
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgccgacgccgccggccagctcgc 236 |||| ||||||||||||||||||| Sbjct: 69304 cgcccacgccgccggccagctcgc 69281
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cgccggcctcttctccgccg 217 |||||||||||||||||||| Sbjct: 38964 cgccggcctcttctccgccg 38945
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 ggcgcggccgccgccggcggcgac 192 |||||||||||||||| ||||||| Sbjct: 43775 ggcgcggccgccgccgccggcgac 43798
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgc 224 ||||||||||||| |||||||||| Sbjct: 184858 cggcctcttctcctccgacgccgc 184881
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgc 224 ||||||||||||| |||||||||| Sbjct: 70071 cggcctcttctcctccgacgccgc 70094
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccgccgccggcggcgacgac 195 |||||||||||||||||||| Sbjct: 17377 ccgccgccggcggcgacgac 17396
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 28846 gccgccgccggcggcgacga 28827
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccgccgccggcggcgacga 194 |||||||||||||||||||| Sbjct: 74812 gccgccgccggcggcgacga 74793
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 118999 aagaaagaaaggaagagaca 119018
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgccgacgccgccggccagctcgc 236 ||||| |||||||||||||||||| Sbjct: 52028 cgccgccgccgccggccagctcgc 52005
>dbj|AK121166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080J06, full insert sequence Length = 3462 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 2894 cgcggccgccgccggcggcg 2913
>dbj|AK120833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P07, full insert sequence Length = 1647 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cgccggcctcttctccgccg 217 |||||||||||||||||||| Sbjct: 362 cgccggcctcttctccgccg 381
>dbj|AK120024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C07, full insert sequence Length = 1568 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 cggcctcttctccgccgacgccgc 224 ||||||||||||| |||||||||| Sbjct: 260 cggcctcttctcctccgacgccgc 283
>dbj|AK119462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E11, full insert sequence Length = 2513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggccgccgccggcggcgacg 193 |||||||||||||||||||| Sbjct: 222 ggccgccgccggcggcgacg 241
>ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 (ENSANGG00000016594), mRNA Length = 1481 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tccagaaggcgaccaaggcg 291 |||||||||||||||||||| Sbjct: 1141 tccagaaggcgaccaaggcg 1160
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcggccgccgccggcggcga 191 |||||||||||||||||||| Sbjct: 248 gcggccgccgccggcggcga 229
>dbj|AK107512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E12, full insert sequence Length = 1901 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 cggcgcggccgccgccggcggcga 191 |||||| ||||||||||||||||| Sbjct: 378 cggcgccgccgccgccggcggcga 355
>emb|AJ328366.1|HSA328366 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-4AC7RS Length = 697 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ctccgccgacgccgccggcc 229 |||||||||||||||||||| Sbjct: 164 ctccgccgacgccgccggcc 183
>dbj|AK069500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H01, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 ggcgcggccgccgccggcggcgac 192 |||||||||||||||| ||||||| Sbjct: 458 ggcgcggccgccgccgccggcgac 435
>dbj|AK066147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B11, full insert sequence Length = 3362 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 2996 cgcggccgccgccggcggcg 3015
>dbj|AK065261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J21, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 cgccgacgccgccggccagctcgc 236 |||| ||||||||||||||||||| Sbjct: 887 cgcccacgccgccggccagctcgc 910
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcggcgacgac 195 ||||| ||||| |||||||||||||||| Sbjct: 25278 cggcggggccggcgccggcggcgacgac 25305
>emb|AJ430034.1|HSA430034 Homo sapiens partial MUC4 gene for mucin 4, exons 5-25 Length = 25773 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcgccggcctcttctccgcc 216 |||||||||||||||||||| Sbjct: 10357 tcgccggcctcttctccgcc 10376
>gb|AF080002.1|AF080002 Heliobacillus mobilis exopolyphosphatase Ppx (ppx) gene, partial cds; cobyric acid synthase CobQ (cobQ), UDP-N-acetylmuramyl tripeptide synthetase MurC (murC), glutamyl tRNA reductase HemA (hemA), photosynthesis gene cluster, complete sequence, stage II sporulation protein E Sp2E (sp2E), cell cycle protein MesJ (mesJ), and ATP-dependent zinc metallopeptidase FtsH (ftsH) genes, complete cds; and nucleoside diphosphate kinase B NdkB (ndkB) gene, partial cds Length = 35618 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accacttcggcgcggccgccgccg 184 ||||||||||||| |||||||||| Sbjct: 455 accacttcggcgctgccgccgccg 432
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcg 187 |||||||||||||||||||| Sbjct: 3284742 cggcgcggccgccgccggcg 3284761 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cggcgcggccgccgccggcg 187 |||||||||||||||||||| Sbjct: 2933236 cggcgcggccgccgccggcg 2933255
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 3292002 cgcggccgccgccggcggcg 3291983 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gcggccgccgccggcggcgacgac 195 ||||||| |||||||||||||||| Sbjct: 1254541 gcggccggcgccggcggcgacgac 1254518 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ttcggcgcggccgccgccgg 185 |||||||||||||||||||| Sbjct: 1120271 ttcggcgcggccgccgccgg 1120290
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 167 tcggcgcggccgccgccggcggcgacgacttcgccggcct 206 ||||||||||| |||| ||||| |||||||| ||||||| Sbjct: 331877 tcggcgcggccttcgcccgcggccacgacttccccggcct 331838
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggccgccgccggcggcg 190 |||||||||||||||||||| Sbjct: 16843577 cgcggccgccgccggcggcg 16843596
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tcttcttcttcttcggccgc 20 |||||||||||||||||||| Sbjct: 2696367 tcttcttcttcttcggccgc 2696348
>emb|AL831733.4| Mouse DNA sequence from clone RP23-109O11 on chromosome 4, complete sequence Length = 196863 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aagaaagaaaggaagagaca 40 |||||||||||||||||||| Sbjct: 25937 aagaaagaaaggaagagaca 25918
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 cgccgccggcggcgacgacttcgc 200 |||||||||||||||||| ||||| Sbjct: 7890 cgccgccggcggcgacgatttcgc 7913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,506,827 Number of Sequences: 3902068 Number of extensions: 6506827 Number of successful extensions: 796062 Number of sequences better than 10.0: 218 Number of HSP's better than 10.0 without gapping: 231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 782517 Number of HSP's gapped (non-prelim): 13537 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
