>PRTZ_HORVU (P06293) Protein Z (Z4) (Major endosperm albumin)|
          Length = 399

 Score =  107 bits (268), Expect = 1e-23
 Identities = 62/121 (51%), Positives = 73/121 (60%)
 Frame = +2

Query: 80  TDIRLSIAHQTRFALRLASAISSPSHAKGSSGNAAFSPXXXXXXXXXXXXXXXXXTRDQL 259
           TD+RLSIAHQTRFALRL SAISS  + + ++GN AFSP                 TRDQL
Sbjct: 7   TDVRLSIAHQTRFALRLRSAISS--NPERAAGNVAFSPLSLHVALSLITAGAAA-TRDQL 63

Query: 260 AATLGAAEKGDAEGLHXXXXXXXXXXXXXXSGAGGPRVAFANGVFVDASLKLKPSFKDLV 439
            A LG    GDA+ L+              S  GGPR+AFANG+FVDASL LKPSF++L 
Sbjct: 64  VAILGDGGAGDAKELNALAEQVVQFVLANESSTGGPRIAFANGIFVDASLSLKPSFEELA 123

Query: 440 V 442
           V
Sbjct: 124 V 124

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
 Frame = +1

Query: 4   PRTSPFPLRSNQSPTSDE---LPPGHGD------HRH-PPLHRAPDPLRAPPCLRHLLAL 153
           P+  P P  S   PT  +    PP  G       HRH PP HR   P   P  LRHL   
Sbjct: 196 PQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLRHLPPS 255

Query: 154 PRQ 162
           PR+
Sbjct: 256 PRR 258



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 1   HPRTSPFPLRSNQSPTSDELPPGHGDHRHPPLHRAPDP 114
           H +  P P   +  P+    PP     +HPP HR P P
Sbjct: 137 HGQRPPSPSHGHAPPSGGHTPPRG---QHPPSHRRPSP 171



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +1

Query: 16  PFPLRSNQSPTSDELPPGHGDHRHP-PLHRAPDPLRAPP 129
           P P R  Q PT    PP +     P P +  P P  +PP
Sbjct: 254 PSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292

>SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)|
          Length = 1332

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1    HPRTSPFPLRSNQSPTSDELPPG--HGDHRHPPLHRAP 108
            HP   P P R N SP   +LPP     +  HPPL+R P
Sbjct: 1286 HPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLP 1323

>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 31   SNQSPTSDELPPGHGDHRHPPLHRAPDPLRAPP 129
            S++ P SDE PPG G    PPL   P   + PP
Sbjct: 1302 SHRKPASDEAPPGAGASVPPPLEAPPLVPKVPP 1334

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +1

Query: 13  SPFPLRSNQSPTSDE---LPPGHGDHRHPPL--HRAPDPLRAPP 129
           +P PL SN++   +    LPP  G   HP    H AP P++ PP
Sbjct: 191 TPLPLHSNKAQAYNREKPLPPTPGQRLHPGREGHPAPPPVKPPP 234

>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein|
          Length = 1259

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = +1

Query: 1   HPRTSPFPLR-SNQSP----TSDELPPGHGDHRHPPLHRAPDPLRAPPCL 135
           HP  SPFPL   N SP    T    PP H    HP +   P  L  PP L
Sbjct: 425 HPSASPFPLSLPNHSPLHSFTPTLQPPAHS--HHPNMFAPPTALPPPPPL 472

>PDGFA_XENLA (P13698) Platelet-derived growth factor A chain precursor (PDGF|
           A-chain) (Platelet-derived growth factor alpha
           polypeptide) (PDGF-1)
          Length = 226

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -2

Query: 448 LAHYEILEGRLEFERGVDEDAVGEGDARAASARRVGEHDLHH 323
           LAH EI     + +R +D D+VG G+  +A+  R  +HD HH
Sbjct: 35  LAHSEI-RSISDLQRLLDIDSVGGGEDASAANIRSQKHDFHH 75

>SOS2_MOUSE (Q02384) Son of sevenless homolog 2 (SOS-2) (mSOS-2) (Fragment)|
          Length = 1297

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1    HPRTSPFPLRSNQSPTSDELPPG--HGDHRHPPLHRAP 108
            H    P P R N SP   +LPP     +  HPPL+R P
Sbjct: 1251 HLPAPPVPPRQNSSPLLPKLPPKTYKRELSHPPLYRLP 1288

>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex|
           component SNF5) (Transcription factor TYE4)
          Length = 905

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
 Frame = +1

Query: 1   HPRTSPFPLRS----NQSPTSDELPPGHGDHRHPPLHR---APDPLRAPPCLRHLLALPR 159
           H    P P +S    NQS TS   PP    + HP + +   AP P+  PP +  L    +
Sbjct: 77  HQSPPPPPQQSQPIANQSATSTPPPPPAPHNLHPQIGQVPLAPAPINLPPQIAQLPLATQ 136

Query: 160 QGILRQ 177
           Q +L +
Sbjct: 137 QQVLNK 142

>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 762

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 4   PRTSPFPLRSNQSPTSDELP-PGHGDHRHPPLHRAPDPLRAP 126
           PRTS   L+++Q+  +   P PG G HR P     P P   P
Sbjct: 636 PRTSSSSLQADQANNNAPGPRPGSGSHRSPARQGLPSPPGTP 677

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
 Frame = +1

Query: 1   HPRTSPFPLRSNQSPTSDELPPGHGDHRHPPLH----RAPDPLRAPPCLRH 141
           HP   P P    Q  T     P    H  PPLH      P  L+A P L+H
Sbjct: 815 HPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQH 865

>PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 889

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
 Frame = +1

Query: 4   PRTSPFPLRSNQSPTSDELPPGHGDHRHPPLHRAP----DPLRAPPCLRHLLAL 153
           P   P  L   Q PTS+E P     H  P   R P     P R PP L+    L
Sbjct: 509 PPPKPPRLYLPQEPTSEETPRTKRPHMEPRTRRGPSPPASPTRKPPRLQDFRCL 562

>ZDHC5_PONPY (Q5R838) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5)
          Length = 715

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
 Frame = +1

Query: 82  RHP------PLHRAPDPLRAPPCLRHLLA--LPRQGILRQRCLLP 192
           RHP      P HR P P+R     RH++A    R+ +LRQ   LP
Sbjct: 514 RHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLP 558

>ZDHC5_PANTR (Q2THX1) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5)
          Length = 715

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
 Frame = +1

Query: 82  RHP------PLHRAPDPLRAPPCLRHLLA--LPRQGILRQRCLLP 192
           RHP      P HR P P+R     RH++A    R+ +LRQ   LP
Sbjct: 514 RHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLP 558

>ZDHC5_HUMAN (Q9C0B5) Probable palmitoyltransferase ZDHHC5 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 5) (DHHC-5) (Zinc
           finger protein 375)
          Length = 715

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
 Frame = +1

Query: 82  RHP------PLHRAPDPLRAPPCLRHLLA--LPRQGILRQRCLLP 192
           RHP      P HR P P+R     RH++A    R+ +LRQ   LP
Sbjct: 514 RHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLP 558

>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 765

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
 Frame = +1

Query: 4   PRTSPFPLRSNQSPTSDELP-PGHGDHRHPPLHRAPDP--------LRAP-PCLRHLLAL 153
           PRTS   L+++Q+ ++   P P  G HR P     P P        LR P  C  H    
Sbjct: 639 PRTSSSSLQADQASSNAPGPRPSSGSHRSPARQGLPSPPGTPHLTILRGPQSCRLHPHGP 698

Query: 154 PRQGILRQR 180
           PR   L  R
Sbjct: 699 PRATALADR 707


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,597,126
Number of Sequences: 219361
Number of extensions: 696510
Number of successful extensions: 3408
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3380
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)