ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 87 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 146 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 147 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 203 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 204 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 263 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 264 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 323 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 324 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 383 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 384 gacaagaccgaggaggaccg 403
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 86 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 145 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 202 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 203 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 262 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 263 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 322 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 323 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 382 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 383 gacaagaccgaggaggaccg 402
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 86 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 145 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 202 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 203 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 262 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 263 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 322 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 323 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 382 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 383 gacaagaccgaggaggaccg 402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Minus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 29386467 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 29386408 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 29386407 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 29386351 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 29386350 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 29386291 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 29386290 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 29386231 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 29386230 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 29386171 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 29386170 gacaagaccgaggaggaccg 29386151
>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full insert sequence Length = 1599 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 86 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 145 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 202 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 203 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 262 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 263 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 322 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 323 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 382 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 383 gacaagaccgaggaggaccg 402
>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full insert sequence Length = 1597 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 87 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 146 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 147 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 203 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 204 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 263 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 264 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 323 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 324 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 383 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 384 gacaagaccgaggaggaccg 403
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Minus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 49389 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 49330 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 49329 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 49273 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 49272 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 49213 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 49212 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 49153 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 49152 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 49093 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 49092 gacaagaccgaggaggaccg 49073
>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full insert sequence Length = 1615 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| Sbjct: 86 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgac 145 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccccccgccgcc 202 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 203 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 262 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 263 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 322 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 323 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 382 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 383 gacaagaccgaggaggaccg 402
>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1609 Score = 416 bits (210), Expect = e-113 Identities = 293/320 (91%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 89 gcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgac 148 |||||||||||||||||||| ||||| ||||||||||||| |||||| ||||| |||||| Sbjct: 54 gcgaccatggggcagggcaccccgggaggcatgggcaagcagggcggtgcccccggcgac 113 Query: 149 cgcaacaagccgggcggcgacggcgacaagaaggacaagaagttcgagccccccgccgcg 208 ||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 114 cgcaa---gcctggcggcgacggcgacaagaaggaccgcaagttcgagccctccgccgcc 170 Query: 209 ccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcccgcctc 268 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 171 ccctcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctc 230 Query: 269 cccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgcgtcaag 328 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 231 cccaacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaag 290 Query: 329 gactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgccccacagag 388 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 291 gactacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgag 350 Query: 389 gagaagacggaggaggaccg 408 || ||||| ||||||||||| Sbjct: 351 gacaagaccgaggaggaccg 370
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 252 bits (127), Expect = 8e-64 Identities = 278/326 (85%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 86 ccggcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggc 145 |||||| | |||||||||||||| || ||||| ||||| |||| ||||||| ||| ||| Sbjct: 10434505 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 10434564 Query: 146 gaccgcaa-caagccg--ggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 || ||||| | | || ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 10434565 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 10434624 Query: 203 gccgcgccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcc 262 |||||||| |||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 10434625 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 10434684 Query: 263 cgcctccccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgc 322 ||||| ||| ||| ||||||||||||||||||||||||||| | |||||||| || || Sbjct: 10434685 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 10434744 Query: 323 gtcaaggactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgcccc 382 ||||||||||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 10434745 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 10434804 Query: 383 acagaggagaagacggaggaggaccg 408 | ||||| ||||||||||||||||| Sbjct: 10434805 agcgaggacaagacggaggaggaccg 10434830
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 252 bits (127), Expect = 8e-64 Identities = 278/326 (85%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 86 ccggcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggc 145 |||||| | |||||||||||||| || ||||| ||||| |||| ||||||| ||| ||| Sbjct: 91058 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 91117 Query: 146 gaccgcaa-caagccg--ggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 || ||||| | | || ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 91118 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 91177 Query: 203 gccgcgccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcc 262 |||||||| |||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 91178 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 91237 Query: 263 cgcctccccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgc 322 ||||| ||| ||| ||||||||||||||||||||||||||| | |||||||| || || Sbjct: 91238 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 91297 Query: 323 gtcaaggactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgcccc 382 ||||||||||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 91298 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 91357 Query: 383 acagaggagaagacggaggaggaccg 408 | ||||| ||||||||||||||||| Sbjct: 91358 agcgaggacaagacggaggaggaccg 91383
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 252 bits (127), Expect = 8e-64 Identities = 278/326 (85%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 86 ccggcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggc 145 |||||| | |||||||||||||| || ||||| ||||| |||| ||||||| ||| ||| Sbjct: 10432606 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 10432665 Query: 146 gaccgcaa-caagccg--ggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 || ||||| | | || ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 10432666 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 10432725 Query: 203 gccgcgccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcc 262 |||||||| |||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 10432726 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 10432785 Query: 263 cgcctccccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgc 322 ||||| ||| ||| ||||||||||||||||||||||||||| | |||||||| || || Sbjct: 10432786 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 10432845 Query: 323 gtcaaggactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgcccc 382 ||||||||||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 10432846 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 10432905 Query: 383 acagaggagaagacggaggaggaccg 408 | ||||| ||||||||||||||||| Sbjct: 10432906 agcgaggacaagacggaggaggaccg 10432931
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 252 bits (127), Expect = 8e-64 Identities = 278/326 (85%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 86 ccggcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggc 145 |||||| | |||||||||||||| || ||||| ||||| |||| ||||||| ||| ||| Sbjct: 70 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 129 Query: 146 gaccgcaa-caagccg--ggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 || ||||| | | || ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 130 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 189 Query: 203 gccgcgccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcc 262 |||||||| |||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 190 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 249 Query: 263 cgcctccccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgc 322 ||||| ||| ||| ||||||||||||||||||||||||||| | |||||||| || || Sbjct: 250 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 309 Query: 323 gtcaaggactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgcccc 382 ||||||||||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 310 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 369 Query: 383 acagaggagaagacggaggaggaccg 408 | ||||| ||||||||||||||||| Sbjct: 370 agcgaggacaagacggaggaggaccg 395
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 252 bits (127), Expect = 8e-64 Identities = 278/326 (85%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 86 ccggcgaccatggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggc 145 |||||| | |||||||||||||| || ||||| ||||| |||| ||||||| ||| ||| Sbjct: 14 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 73 Query: 146 gaccgcaa-caagccg--ggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 || ||||| | | || ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 74 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 133 Query: 203 gccgcgccctcccgcgtcggccgcaagcagcgccgccagaaggggcccgaggcggccgcc 262 |||||||| |||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 134 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 193 Query: 263 cgcctccccaacgtcgcgccgctctccaagtgccgcctccgcctcctcaagctcgaccgc 322 ||||| ||| ||| ||||||||||||||||||||||||||| | |||||||| || || Sbjct: 194 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 253 Query: 323 gtcaaggactacctcctcatggaggaggagttcgtcgccgcgcaggagcgcctccgcccc 382 ||||||||||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 254 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 313 Query: 383 acagaggagaagacggaggaggaccg 408 | ||||| ||||||||||||||||| Sbjct: 314 agcgaggacaagacggaggaggaccg 339
>ref|XM_450245.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/109 (83%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 94 catggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgaccgcaa 153 ||||||||||||||| || || ||||||||||||| ||| ||| |||| || || || Sbjct: 1444 catggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcg--- 1500 Query: 154 caagccgggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 |||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1501 caagtctggcggcgacggcgacaagaaggagcgcaagttcgagcccccc 1549
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/109 (83%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 94 catggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgaccgcaa 153 ||||||||||||||| || || ||||||||||||| ||| ||| |||| || || || Sbjct: 3436783 catggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcg--- 3436727 Query: 154 caagccgggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 |||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 3436726 caagtctggcggcgacggcgacaagaaggagcgcaagttcgagcccccc 3436678
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/109 (83%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 94 catggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgaccgcaa 153 ||||||||||||||| || || ||||||||||||| ||| ||| |||| || || || Sbjct: 152715 catggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcg--- 152659 Query: 154 caagccgggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 |||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 152658 caagtctggcggcgacggcgacaagaaggagcgcaagttcgagcccccc 152610
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/109 (83%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 94 catggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgaccgcaa 153 ||||||||||||||| || || ||||||||||||| ||| ||| |||| || || || Sbjct: 105264 catggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcg--- 105208 Query: 154 caagccgggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 |||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 105207 caagtctggcggcgacggcgacaagaaggagcgcaagttcgagcccccc 105159
>dbj|AK109459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C04, full insert sequence Length = 1959 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/109 (83%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 94 catggggcagggcacgccgggcggcatgggcaagccgggcggcgccccgggcgaccgcaa 153 ||||||||||||||| || || ||||||||||||| ||| ||| |||| || || || Sbjct: 1444 catggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcg--- 1500 Query: 154 caagccgggcggcgacggcgacaagaaggacaagaagttcgagcccccc 202 |||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1501 caagtctggcggcgacggcgacaagaaggagcgcaagttcgagcccccc 1549
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA, complete cds Length = 1845 Score = 61.9 bits (31), Expect = 1e-06 Identities = 145/183 (79%) Strand = Plus / Plus Query: 176 aagaaggacaagaagttcgagccccccgccgcgccctcccgcgtcggccgcaagcagcgc 235 |||||||| ||||||| |||||| |||| | ||| | ||||| || |||||||||||| Sbjct: 259 aagaaggagaagaagtacgagccggccgcgccacccacgcgcgtggggcgcaagcagcgc 318 Query: 236 cgccagaaggggcccgaggcggccgcccgcctccccaacgtcgcgccgctctccaagtgc 295 |||||||| ||||||||||||| ||||| ||| ||| |||| | ||||||| Sbjct: 319 aagcagaagggctccgaggcggccgcgcgcctgcccgttgtcacgcccgccaccaagtgt 378 Query: 296 cgcctccgcctcctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 ||| ||||| || ||||| ||||| | ||||||||| || |||||| ||||||||||| Sbjct: 379 aacctgcgcctgctgaagctggaccgtgccaaggactatctgctcatgaaggaggagttc 438 Query: 356 gtc 358 ||| Sbjct: 439 gtc 441
>emb|CR727756.2|CNS0GOHE Tetraodon nigroviridis full-length cDNA Length = 1397 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 151 aaggactacctcctgatggaggaggagttc 180
>emb|CR719511.2|CNS0GI4D Tetraodon nigroviridis full-length cDNA Length = 1483 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR711378.2|CNS0GBUM Tetraodon nigroviridis full-length cDNA Length = 765 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR713443.2|CNS0GDFZ Tetraodon nigroviridis full-length cDNA Length = 765 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR695652.2|CNS0FZPS Tetraodon nigroviridis full-length cDNA Length = 1333 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR689180.2|CNS0FUQ0 Tetraodon nigroviridis full-length cDNA Length = 1478 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR650415.2|CNS0F0TX Tetraodon nigroviridis full-length cDNA Length = 1469 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR649796.2|CNS0F0CQ Tetraodon nigroviridis full-length cDNA Length = 1461 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR646015.2|CNS0EXFP Tetraodon nigroviridis full-length cDNA Length = 1507 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 326 aaggactacctcctcatggaggaggagttc 355 |||||||||||||| ||||||||||||||| Sbjct: 240 aaggactacctcctgatggaggaggagttc 269
>emb|BX060993.1|CNS09J85 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41CD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 275 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 322
>emb|BX067931.1|CNS09OKV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 935 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 207 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 254
>emb|BX041812.1|CNS094FC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 546 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 201 ctcaagctggagcgcctcaaggactatctgctgatggaggaggagttc 248
>emb|BX038369.1|CNS091RP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2DA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 720 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Minus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 463 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 416
>emb|BX017976.1|CNS08M18 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 949 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 203 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 250
>emb|BX009769.1|CNS08FP9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 882 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 271 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 318
>ref|XM_312924.2| Anopheles gambiae str. PEST ENSANGP00000014726 (ENSANGG00000012237), partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228
>ref|XM_312923.2| Anopheles gambiae str. PEST ENSANGP00000014769 (ENSANGG00000012280), partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228
>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 (ENSANGG00000014617), partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228
>ref|XM_312719.2| Anopheles gambiae str. PEST ENSANGP00000017098 (ENSANGG00000014609), partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Plus Query: 308 ctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228
>ref|XM_969766.1| PREDICTED: Tribolium castaneum similar to CG5289-PA (LOC663731), mRNA Length = 1377 Score = 46.1 bits (23), Expect = 0.089 Identities = 44/51 (86%) Strand = Plus / Plus Query: 305 ctcctcaagctcgaccgcgtcaaggactacctcctcatggaggaggagttc 355 |||||||| ||||| ||| |||| || |||||| | ||||||||||||||| Sbjct: 238 ctcctcaaactcgaacgcatcaaagattacctcttgatggaggaggagttc 288
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 342 tggaggaggagttcgtcgccgcg 364 ||||||||||||||||||||||| Sbjct: 36583 tggaggaggagttcgtcgccgcg 36561
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Plus Query: 95 atggggcagggcacgccgggcggcatg 121 |||| |||||||||||||||||||||| Sbjct: 1042238 atggcgcagggcacgccgggcggcatg 1042264
>gb|BT020983.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA, complete cds Length = 1534 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Plus Query: 329 gactacctcctcatggaggaggagttc 355 ||||| ||||||||||||||||||||| Sbjct: 231 gactatctcctcatggaggaggagttc 257
>ref|NM_001014855.1| Bos taurus proteasome 26S ATPase subunit 1 (PSMC1), mRNA Length = 1534 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Plus Query: 329 gactacctcctcatggaggaggagttc 355 ||||| ||||||||||||||||||||| Sbjct: 231 gactatctcctcatggaggaggagttc 257
>ref|NM_196696.1| Oryza sativa (japonica cultivar-group) putative metal-binding protein (OSJNBa0046P18.5), mRNA Length = 1080 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ggcggcgacggcgacaagaaggacaa 186 ||||||| |||||||||||||||||| Sbjct: 727 ggcggcggcggcgacaagaaggacaa 752
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ggcggcgacggcgacaagaaggacaa 186 ||||||| |||||||||||||||||| Sbjct: 15314020 ggcggcggcggcgacaagaaggacaa 15314045
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ggcggcgacggcgacaagaaggacaa 186 ||||||| |||||||||||||||||| Sbjct: 31383 ggcggcggcggcgacaagaaggacaa 31408
>gb|AC154798.2| Mus musculus BAC clone RP24-495N16 from chromosome 17, complete sequence Length = 138195 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 aagccagagagaaaagaaaaga 32 |||||||||||||||||||||| Sbjct: 28230 aagccagagagaaaagaaaaga 28209
>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence Length = 148876 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 aagccagagagaaaagaaaaga 32 |||||||||||||||||||||| Sbjct: 107861 aagccagagagaaaagaaaaga 107840
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ggcggcgacggcgacaagaaggacaa 186 ||||||| |||||||||||||||||| Sbjct: 15322261 ggcggcggcggcgacaagaaggacaa 15322286
>emb|AL589986.15| Human DNA sequence from clone RP11-107M16 on chromosome 1 Contains the THH gene for trichohyalin, two novel genes, a family with sequence similarity 16 member A X-linked (FAM16AX) pseudogene, the 5' end of a variant of a novel gene and the gene for a novel S-100/ICaBP type calcium binding domain EF hand domain and Filaggrin domain containing protein, complete sequence Length = 151578 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ctggttgaagccagagagaaaa 25 |||||||||||||||||||||| Sbjct: 76574 ctggttgaagccagagagaaaa 76553
>gb|AC138293.11| Mus musculus chromosome 18, clone RP23-33P24, complete sequence Length = 235495 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 aagccagagagaaaagaaaaga 32 |||||||||||||||||||||| Sbjct: 19413 aagccagagagaaaagaaaaga 19392
>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence Length = 180660 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 73796 agccagagagaaaagaaaaga 73816
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 14709 agccagagagaaaagaaaaga 14729
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence Length = 225183 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 115797 agccagagagaaaagaaaaga 115817
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttgaagccagagagaaaagaa 28 ||||||||||||||||||||| Sbjct: 205773 ttgaagccagagagaaaagaa 205793
>gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome 8, complete sequence Length = 204239 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttgaagccagagagaaaagaa 28 ||||||||||||||||||||| Sbjct: 1290 ttgaagccagagagaaaagaa 1310
>gb|AC124195.4| Mus musculus BAC clone RP23-285G17 from 16, complete sequence Length = 196102 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 98510 agccagagagaaaagaaaaga 98490
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ccagagagaaaagaaaagaga 34 ||||||||||||||||||||| Sbjct: 137020 ccagagagaaaagaaaagaga 137000
>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence Length = 196300 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 1255 agccagagagaaaagaaaaga 1275
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 cgtcgccgcgcaggagcgcctccgc 379 |||||||||||||||||||| |||| Sbjct: 466789 cgtcgccgcgcaggagcgccaccgc 466765
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 aagccgggcggcgacggcgac 175 ||||||||||||||||||||| Sbjct: 117314 aagccgggcggcgacggcgac 117294
>ref|XM_394511.2| PREDICTED: Apis mellifera similar to echinus (LOC411038), mRNA Length = 5499 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gcgacggcgacaagaaggacaagaa 189 |||||| |||||||||||||||||| Sbjct: 2270 gcgacgacgacaagaaggacaagaa 2294
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 125165 agccagagagaaaagaaaaga 125185
>gb|AC158605.5| Mus musculus BAC RP24-406I15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172269 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 12487 agccagagagaaaagaaaaga 12507
>gb|AC154136.13| Mus musculus BAC RP23-184A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 220233 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 193674 agccagagagaaaagaaaaga 193694
>gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, complete sequence Length = 183178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 9350 agccagagagaaaagaaaaga 9330
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 65972 agccagagagaaaagaaaaga 65952
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gcccgaggcggccgcccgcct 267 ||||||||||||||||||||| Sbjct: 2042580 gcccgaggcggccgcccgcct 2042560
>gb|AC129329.3| Mus musculus BAC clone RP23-43M12 from 10, complete sequence Length = 176092 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 124956 agccagagagaaaagaaaaga 124936
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 97910 agccagagagaaaagaaaaga 97890
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaaga 32 ||||||||||||||||||||| Sbjct: 194103 agccagagagaaaagaaaaga 194123
>emb|AL844873.4| Mouse DNA sequence from clone RP23-26H8 on chromosome 2, complete sequence Length = 250495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ccagagagaaaagaaaagaga 34 ||||||||||||||||||||| Sbjct: 81462 ccagagagaaaagaaaagaga 81482
>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete sequence Length = 190178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ccagagagaaaagaaaagaga 34 ||||||||||||||||||||| Sbjct: 168642 ccagagagaaaagaaaagaga 168622
>ref|NM_127300.3| Arabidopsis thaliana RHA3A; protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G17450 (RHA3A) mRNA, complete cds Length = 827 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 535 gcgacaagaaggacaagaag 516
>ref|XM_476085.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcatggaggaggagttc 355 |||||||||||||||||||| Sbjct: 1784 tcctcatggaggaggagttc 1803
>gb|AY830138.1| Ipomoea batatas cultivar Beauregard clone BAC117E14, complete sequence Length = 99025 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagagagaaaagaaaagaga 34 |||||||||||||||||||| Sbjct: 78083 cagagagaaaagaaaagaga 78102
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcatggaggaggagttc 355 |||||||||||||||||||| Sbjct: 34826 tcctcatggaggaggagttc 34845
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gccgcaagcagcgccgccag 241 |||||||||||||||||||| Sbjct: 911122 gccgcaagcagcgccgccag 911103
>ref|XM_512496.1| PREDICTED: Pan troglodytes similar to B-cell novel protein 1 (LOC455842), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgaggcggccgcccgcctcc 269 |||||||||||||||||||| Sbjct: 946 cgaggcggccgcccgcctcc 965
>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence Length = 128493 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 tgccgcctccgcctcctcaagctc 316 ||||||| |||||||||||||||| Sbjct: 26281 tgccgccgccgcctcctcaagctc 26258
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gaggagttcgtcgccgcgca 366 |||||||||||||||||||| Sbjct: 1631486 gaggagttcgtcgccgcgca 1631505
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 agccgggcggcgacggcgac 175 |||||||||||||||||||| Sbjct: 66364 agccgggcggcgacggcgac 66345
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gaggagttcgtcgccgcgca 366 |||||||||||||||||||| Sbjct: 2878200 gaggagttcgtcgccgcgca 2878219
>gb|AC144776.2| Mus musculus BAC clone RP23-357B5 from chromosome 16, complete sequence Length = 190860 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 95514 agagagaaaagaaaagagat 95533
>ref|NM_012088.2| Homo sapiens 6-phosphogluconolactonase (PGLS), mRNA Length = 1043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgaggcggccgcccgcctcc 269 |||||||||||||||||||| Sbjct: 773 cgaggcggccgcccgcctcc 792
>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence Length = 144353 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagagagaaaagaaaagaga 34 |||||||||||||||||||| Sbjct: 46100 cagagagaaaagaaaagaga 46119
>ref|XM_914626.2| PREDICTED: Mus musculus expressed sequence AI481105, transcript variant 7 (AI481105), mRNA Length = 7967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 851 gccccccgccgcgccctccc 870
>ref|XM_001005072.1| PREDICTED: Mus musculus similar to expressed sequence AI481105 (LOC668949), mRNA Length = 381 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 92 gccccccgccgcgccctccc 111
>ref|XM_895133.2| PREDICTED: Mus musculus expressed sequence AI481105, transcript variant 1 (AI481105), mRNA Length = 7968 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 851 gccccccgccgcgccctccc 870
>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence Length = 143926 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagagagaaaagaaaagaga 34 |||||||||||||||||||| Sbjct: 133729 cagagagaaaagaaaagaga 133748
>emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete sequence Length = 229049 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 52149 agccagagagaaaagaaaag 52168
>emb|CR812476.12| Zebrafish DNA sequence from clone DKEY-60I7 in linkage group 5, complete sequence Length = 92704 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 50348 agagagaaaagaaaagagat 50367
>emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in linkage group 23, complete sequence Length = 176131 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 10163 agagagaaaagaaaagagat 10144
>gb|AC122385.2| Mus musculus BAC clone RP24-72B22 from chromosome 1, complete sequence Length = 178821 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 176795 agccagagagaaaagaaaag 176776
>emb|AJ243972.1|HSA243972 Homo sapiens mRNA for 6-phosphogluconolactonase (6PGL gene) Length = 1010 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgaggcggccgcccgcctcc 269 |||||||||||||||||||| Sbjct: 740 cgaggcggccgcccgcctcc 759
>gb|U41009.1| Caenorhabditis elegans cosmid C06E7, complete sequence Length = 44451 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 40872 agagagaaaagaaaagagat 40891
>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence Length = 223833 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 54342 agccagagagaaaagaaaag 54361
>emb|BX322790.2| Human DNA sequence from clone RP11-114H20 on chromosome X Contains the gene for a novel protein (LOC349420,LOC256106), complete sequence Length = 14513 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 ccacagaggagaagacggaggagg 404 ||||||||||||||| |||||||| Sbjct: 9002 ccacagaggagaagagggaggagg 9025
>emb|AL928717.5| Human DNA sequence from clone RP11-363G10 on chromosome X Contains the gene for family D 4 melanoma antigen (MAGED4) (KIAA1859, DKFZp761N1924, FLJ37222, FLJ25964), gene LOC349420 (FLJ39060) and a CpG island, complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 ccacagaggagaagacggaggagg 404 ||||||||||||||| |||||||| Sbjct: 60440 ccacagaggagaagagggaggagg 60417
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cgcaagcagcgccgccagaa 243 |||||||||||||||||||| Sbjct: 539126 cgcaagcagcgccgccagaa 539107
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tcccgcgtcggccgcaagca 231 |||||||||||||||||||| Sbjct: 449894 tcccgcgtcggccgcaagca 449913
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gaggagttcgtcgccgcgca 366 |||||||||||||||||||| Sbjct: 3066179 gaggagttcgtcgccgcgca 3066198
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cacgccgggcggcatgggca 125 |||||||||||||||||||| Sbjct: 2307259 cacgccgggcggcatgggca 2307240
>emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 on chromosome X Contains the 3' end of a novel gene (FLJ23018) and the 3' end of the TRPC5 gene for transient receptor potential cation channel subfamily C member 5, complete sequence Length = 113028 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gagagaaaagaaaagagatc 36 |||||||||||||||||||| Sbjct: 104216 gagagaaaagaaaagagatc 104197
>emb|CR381637.5| Zebrafish DNA sequence from clone DKEY-225P19 in linkage group 21, complete sequence Length = 171229 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 100868 agagagaaaagaaaagagat 100849
>gb|AY062961.1| Arabidopsis thaliana putative RING zinc finger protein (At2g17450) mRNA, complete cds Length = 589 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 432 gcgacaagaaggacaagaag 413
>gb|AF370239.1| Arabidopsis thaliana putative RING zinc finger protein (At2g17450) mRNA, complete cds Length = 776 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 476 gcgacaagaaggacaagaag 457
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gaggagttcgtcgccgcgca 366 |||||||||||||||||||| Sbjct: 2608361 gaggagttcgtcgccgcgca 2608380
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 6040 agccagagagaaaagaaaag 6059
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagagagaaaagaaaagaga 34 |||||||||||||||||||| Sbjct: 101872 cagagagaaaagaaaagaga 101853
>emb|CR407571.9| Zebrafish DNA sequence from clone CH211-140C16 in linkage group 1, complete sequence Length = 161017 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 147137 agagagaaaagaaaagagat 147118
>emb|BX957352.9| Zebrafish DNA sequence from clone CH211-114O15 in linkage group 23, complete sequence Length = 180880 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 79299 agagagaaaagaaaagagat 79318
>gb|BC014006.2| Homo sapiens 6-phosphogluconolactonase, mRNA (cDNA clone MGC:20013 IMAGE:4053022), complete cds Length = 1034 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgaggcggccgcccgcctcc 269 |||||||||||||||||||| Sbjct: 747 cgaggcggccgcccgcctcc 766
>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13, complete sequence Length = 89710 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 54900 agagagaaaagaaaagagat 54881
>gb|AC010618.9| Homo sapiens chromosome 19 clone CTD-3131K8, complete sequence Length = 107226 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgaggcggccgcccgcctcc 269 |||||||||||||||||||| Sbjct: 31267 cgaggcggccgcccgcctcc 31286
>emb|BX571845.5| Zebrafish DNA sequence from clone DKEY-18P12 in linkage group 9, complete sequence Length = 131458 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 76817 agagagaaaagaaaagagat 76798
>emb|BX510949.10| Zebrafish DNA sequence from clone DKEY-97E19 in linkage group 5, complete sequence Length = 109001 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 22118 agagagaaaagaaaagagat 22137
>gb|AE005810.1| Caulobacter crescentus CB15 section 136 of 359 of the complete genome Length = 10762 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cgccggcgaccatggggcagggca 107 |||||||||||||||||| ||||| Sbjct: 10222 cgccggcgaccatggggcggggca 10245
>dbj|AK096379.1| Homo sapiens cDNA FLJ39060 fis, clone NT2RP7013729 Length = 2369 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 ccacagaggagaagacggaggagg 404 ||||||||||||||| |||||||| Sbjct: 810 ccacagaggagaagagggaggagg 787
>gb|AC116634.5| Homo sapiens BAC clone RP11-462G13 from 4, complete sequence Length = 85439 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gaagccagagagaaaagaaa 29 |||||||||||||||||||| Sbjct: 26584 gaagccagagagaaaagaaa 26565
>emb|BX548073.8| Zebrafish DNA sequence from clone CH211-207C6, complete sequence Length = 222583 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gccagagagaaaagaaaaga 32 |||||||||||||||||||| Sbjct: 130331 gccagagagaaaagaaaaga 130350
>gb|AC091531.9| Mus musculus Strain C57BL6/J Chromosome 9 RP23-283E4, complete sequence Length = 178084 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 162633 agccagagagaaaagaaaag 162614
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gggcaagccgggcggcgccc 140 |||||||||||||||||||| Sbjct: 1556891 gggcaagccgggcggcgccc 1556910
>gb|AC007584.4| Arabidopsis thaliana chromosome 2 clone MJB20 map mi398, complete sequence Length = 84592 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 1614 gcgacaagaaggacaagaag 1633
>dbj|AK147652.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1099N19 product:Ab1-133 homolog [Rattus norvegicus], full insert sequence Length = 7214 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 102 gccccccgccgcgccctccc 121
>dbj|AK147564.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1079N23 product:Ab1-133 homolog [Rattus norvegicus], full insert sequence Length = 7216 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 103 gccccccgccgcgccctccc 122
>ref|XM_377002.2| PREDICTED: Homo sapiens similar to hypothetical protein LOC401589 (LOC653466), mRNA Length = 2357 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 ccacagaggagaagacggaggagg 404 ||||||||||||||| |||||||| Sbjct: 804 ccacagaggagaagagggaggagg 781
>gb|AC175193.2| Sporobolomyces roseus clone JGIBAIF-13I18, complete sequence Length = 33112 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gaggagaagacggaggagga 405 |||||||||||||||||||| Sbjct: 23357 gaggagaagacggaggagga 23338
>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24, complete sequence Length = 155584 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 27959 agagagaaaagaaaagagat 27940
>emb|BX324133.12| Zebrafish DNA sequence from clone CH211-209H1 in linkage group 10, complete sequence Length = 127130 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 99861 agagagaaaagaaaagagat 99880
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3, complete sequence Length = 195436 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 98401 agagagaaaagaaaagagat 98420
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence Length = 253824 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 130581 agccagagagaaaagaaaag 130562
>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence Length = 194449 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 42326 agccagagagaaaagaaaag 42307
>gb|AF321236.1|AF321236 Mus musculus chromosome 7E3 m50 olfactory receptor and B3 olfactory receptor genes, complete cds Length = 20744 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 11575 agccagagagaaaagaaaag 11594
>emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 in linkage group 10, complete sequence Length = 247227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 81477 agagagaaaagaaaagagat 81496
>emb|CR338848.2| Gallus gallus finished cDNA, clone ChEST199n9 Length = 599 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cccgaggcggccgcccgcctcccc 271 |||||||||||||||||| ||||| Sbjct: 258 cccgaggcggccgcccgcgtcccc 281
>emb|BX324002.8| Zebrafish DNA sequence from clone CH211-129H21 in linkage group 24, complete sequence Length = 178173 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 80421 agagagaaaagaaaagagat 80440
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagagagaaaagaaaagaga 34 |||||||||||||||||||| Sbjct: 29599183 cagagagaaaagaaaagaga 29599164
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 tgccgcctccgcctcctcaagctc 316 ||||||| |||||||||||||||| Sbjct: 6465860 tgccgccgccgcctcctcaagctc 6465837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcatggaggaggagttc 355 |||||||||||||||||||| Sbjct: 5828062 tcctcatggaggaggagttc 5828081
>emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in linkage group 5, complete sequence Length = 151068 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 43022 agagagaaaagaaaagagat 43003
>emb|BX822040.1|CNS0A954 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 723 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 459 gcgacaagaaggacaagaag 440
>emb|BX821155.1|CNS0A973 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 819 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 535 gcgacaagaaggacaagaag 516
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agccgggcggcgacggcgac 175 |||||||||||||||||||| Sbjct: 70262 agccgggcggcgacggcgac 70281
>gb|AC074392.5| Homo sapiens BAC clone RP11-649K1 from 2, complete sequence Length = 109601 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gaggagaagacggaggagga 405 |||||||||||||||||||| Sbjct: 35291 gaggagaagacggaggagga 35272
>gb|AC157947.2| Mus musculus BAC clone RP23-238L21 from chromosome 9, complete sequence Length = 174016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 44610 agccagagagaaaagaaaag 44591
>gb|AC012500.7| Homo sapiens BAC clone RP11-434M17 from 2, complete sequence Length = 117763 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggttgaagccagagagaaaa 25 |||||||||||||||||||| Sbjct: 66999 ggttgaagccagagagaaaa 66980
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 acaagaaggacaagaagttcgagc 197 ||||||| |||||||||||||||| Sbjct: 7878218 acaagaacgacaagaagttcgagc 7878195
>emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 in linkage group 23, complete sequence Length = 141252 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 137945 agagagaaaagaaaagagat 137926
>emb|AL929331.15| Zebrafish DNA sequence from clone DKEY-16O9, complete sequence Length = 221062 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 141024 agagagaaaagaaaagagat 141043
>emb|BX005094.3| Zebrafish DNA sequence from clone CH211-180H17 in linkage group 3, complete sequence Length = 155431 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 133382 agagagaaaagaaaagagat 133363
>emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in linkage group 20, complete sequence Length = 176916 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 56157 agagagaaaagaaaagagat 56176
>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence Length = 186742 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 113421 agagagaaaagaaaagagat 113402
>emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, complete sequence Length = 168257 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 36405 agagagaaaagaaaagagat 36424
>dbj|AK111332.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E05, full insert sequence Length = 1221 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 tgccgcctccgcctcctcaagctc 316 ||||||| |||||||||||||||| Sbjct: 206 tgccgccgccgcctcctcaagctc 229
>emb|BX321890.5| Zebrafish DNA sequence from clone CH211-258D5 in linkage group 5, complete sequence Length = 147231 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 14287 agagagaaaagaaaagagat 14306
>dbj|AK062931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-A07, full insert sequence Length = 594 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 304 gcgacaagaaggacaagaag 323
>emb|AL604064.10| Zebrafish DNA sequence from clone BUSM1-180G5 in linkage group 3, complete sequence Length = 136041 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 95681 agagagaaaagaaaagagat 95700
>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20, complete sequence Length = 202340 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 93647 agagagaaaagaaaagagat 93666
>emb|BX322665.5| Zebrafish DNA sequence from clone DKEY-183N20 in linkage group 20, complete sequence Length = 192437 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 186533 agagagaaaagaaaagagat 186552
>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20, complete sequence Length = 201942 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 199478 agagagaaaagaaaagagat 199459
>gb|AY107904.1| Zea mays PCO096404 mRNA sequence Length = 910 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 ctctccaagtgccgcctccgcctc 307 ||||||||| |||||||||||||| Sbjct: 181 ctctccaagcgccgcctccgcctc 158
>emb|CR354611.10| Zebrafish DNA sequence from clone CH211-249B21 in linkage group 25, complete sequence Length = 81016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 15184 agagagaaaagaaaagagat 15165
>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8, complete sequence Length = 217745 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 1456 agagagaaaagaaaagagat 1475
>gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome 3, complete sequence Length = 230573 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 125250 agccagagagaaaagaaaag 125269
>gb|AF078824.1|AF078824 Arabidopsis thaliana RING-H2 finger protein RHA3a mRNA, complete cds Length = 826 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gcgacaagaaggacaagaag 190 |||||||||||||||||||| Sbjct: 528 gcgacaagaaggacaagaag 509
>emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chromosome 17, complete sequence Length = 189049 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 145301 agccagagagaaaagaaaag 145320
>emb|AL954180.6| Zebrafish DNA sequence from clone CH211-222A10, complete sequence Length = 225504 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 156813 agagagaaaagaaaagagat 156794
>emb|CT030226.8| Mouse DNA sequence from clone RP24-98O3 on chromosome 16, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 21462 agagagaaaagaaaagagat 21481
>gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Locus class II region Length = 138187 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 113032 agccagagagaaaagaaaag 113051
>emb|AL928628.9| Zebrafish DNA sequence from clone DKEY-5G18 in linkage group 7, complete sequence Length = 229942 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agagagaaaagaaaagagat 35 |||||||||||||||||||| Sbjct: 170027 agagagaaaagaaaagagat 170008
>gb|AF385934.1| HIV-1 isolate URTR23 from Uruguay, complete genome Length = 9770 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agagaaaagaaaagagatcc 37 |||||||||||||||||||| Sbjct: 9115 agagaaaagaaaagagatcc 9134 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agagaaaagaaaagagatcc 37 |||||||||||||||||||| Sbjct: 20 agagaaaagaaaagagatcc 39
>ref|NM_001013687.1| Homo sapiens hypothetical protein LOC401589 (LOC401589), mRNA Length = 2369 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 ccacagaggagaagacggaggagg 404 ||||||||||||||| |||||||| Sbjct: 810 ccacagaggagaagagggaggagg 787
>gb|AC166350.4| Mus musculus BAC clone RP24-220P10 from chromosome 17, complete sequence Length = 156954 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 79768 agccagagagaaaagaaaag 79787
>emb|AL772338.9| Mouse DNA sequence from clone RP23-47A6 on chromosome 4, complete sequence Length = 235366 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 53488 agccagagagaaaagaaaag 53507
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 130736 agccagagagaaaagaaaag 130717
>gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, complete sequence Length = 211802 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 1254 agccagagagaaaagaaaag 1235
>emb|AL591711.22| Mouse DNA sequence from clone RP23-19L12 on chromosome 2, complete sequence Length = 197743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gccccccgccgcgccctccc 215 |||||||||||||||||||| Sbjct: 135663 gccccccgccgcgccctccc 135644
>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7 Length = 239057 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aagccagagagaaaagaaaa 30 |||||||||||||||||||| Sbjct: 47759 aagccagagagaaaagaaaa 47740
>emb|AL607032.16| Mouse DNA sequence from clone RP23-15L19 on chromosome 4, complete sequence Length = 136416 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 agccagagagaaaagaaaag 31 |||||||||||||||||||| Sbjct: 126917 agccagagagaaaagaaaag 126898 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,521,038 Number of Sequences: 3902068 Number of extensions: 4521038 Number of successful extensions: 135538 Number of sequences better than 10.0: 180 Number of HSP's better than 10.0 without gapping: 180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132156 Number of HSP's gapped (non-prelim): 3358 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
