| Clone Name | bast65b12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 pre... | 93 | 4e-19 | 2 | FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 p... | 88 | 9e-18 | 3 | FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 pre... | 82 | 6e-16 | 4 | RADA_PICTO (Q6L126) DNA repair and recombination protein radA | 30 | 3.8 |
|---|
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 92.8 bits (229), Expect = 4e-19 Identities = 41/82 (50%), Positives = 60/82 (73%) Frame = +3 Query: 195 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRH 374 +N+T++L +P +S F+ LTQT LA +IN+RRTITV V N+ M +L G TL T+++ Sbjct: 25 HNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTLKN 84 Query: 375 MLQIHVLVDYYGGKKLHQLAHG 440 +L +HVL+DY+G KKLHQ+ G Sbjct: 85 ILSLHVLLDYFGTKKLHQIRDG 106
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 88.2 bits (217), Expect = 9e-18 Identities = 46/85 (54%), Positives = 59/85 (69%) Frame = +3 Query: 192 GYNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIR 371 G+NIT+IL + PEYS FN L+QT+LA +IN R TITVLV+ N M SLA G L ++ Sbjct: 25 GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLA-GKHPLSVVK 83 Query: 372 HMLQIHVLVDYYGGKKLHQLAHGVT 446 + L + VL+DYY KLHQL+ G T Sbjct: 84 NALSLLVLLDYYDPLKLHQLSKGTT 108
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 82.0 bits (201), Expect = 6e-16 Identities = 42/84 (50%), Positives = 58/84 (69%) Frame = +3 Query: 195 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRH 374 +NIT+IL + P+YS FN L+QT+LA +IN R TITVLV+ N M +LA G L I+ Sbjct: 26 HNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALA-GKHPLSVIKS 84 Query: 375 MLQIHVLVDYYGGKKLHQLAHGVT 446 L + VL+DYY +KLH+++ G T Sbjct: 85 ALSLLVLLDYYDPQKLHKISKGTT 108
>RADA_PICTO (Q6L126) DNA repair and recombination protein radA| Length = 323 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +3 Query: 207 KILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRHMLQI 386 KI+ +Y+ T + +NKR+ I L +S++ +L GGG Q+I Sbjct: 59 KIINAARKYADVGNFETGEEI---LNKRKEIKKLTTGSSNLDNLLGGGLETQSITEFFG- 114 Query: 387 HVLVDYYGGKK--LHQLAHGVT 446 ++ GK +HQLA T Sbjct: 115 ----EFGSGKTQIMHQLAVNAT 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,947,316 Number of Sequences: 219361 Number of extensions: 414724 Number of successful extensions: 1397 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1354 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1395 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)