ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65b11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 694 bits (350), Expect = 0.0 Identities = 359/362 (99%) Strand = Plus / Plus Query: 87 ggcggcgaccatggcgccaaggtcagacctcctcgccgcgctagcgttggccctcctcgc 146 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16 ggcggcgaccatggcgccaaggtcagacctcctcgccgcgctggcgttggccctcctcgc 75 Query: 147 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 135 Query: 207 cgaccgcgaccacatcgggtaccgggacgacggcaacgacaagggccaggagttctcgct 266 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136 cgaccgcgaccacatcgggtaccgggacgacggcaacgacaaggggcaggagttctcgct 195 Query: 267 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 255 Query: 327 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 315 Query: 387 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggaaactc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 316 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggcaactc 375 Query: 447 ga 448 || Sbjct: 376 ga 377
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 498 bits (251), Expect = e-138 Identities = 275/283 (97%) Strand = Plus / Plus Query: 164 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 161 Query: 224 ggtaccgggacgacggcaacgacaagggccaggagttctcgctggagctcgaccaggagt 283 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 162 ggtaccgggacgacggcaaggacaagggccaggagttctcgctggagctcgaccaggagt 221 Query: 284 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatga 343 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 222 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatga 281 Query: 344 agctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgaga 403 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 282 agctcgtcgacggcaactccgccggcacagtcacctccttctacctgacttccggcgaga 341 Query: 404 gcgccacccacgacgagatcgacatcgagttcatgggaaactc 446 |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 342 gcgcgacccacgacgagatcgacatcgagttcatgggcaactc 384
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 323 bits (163), Expect = 3e-85 Identities = 249/277 (89%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 172 aaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcgggtaccgg 231 ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| | Sbjct: 121 aaggccgacttcgacgaccagtttgaggtgattggcgaccgtgaccacatcgggtacaag 180 Query: 232 gacgacggcaacgacaagggccaggagttctcgctggagctcgaccaggagtccggctcc 291 ||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 181 gacgacggcaacggc---gggcaggagttctctctggagctcgaccaggaatccggctcc 237 Query: 292 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 351 |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 238 ggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatgaagctcgtc 297 Query: 352 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 411 ||||||||||||||||||||||||||||||||||| ||||| ||||| || ||| ||| Sbjct: 298 gacggcaactccgccggcaccgtcacctccttctatctgacgtccggggaaagcagtacc 357 Query: 412 cacgacgagatcgacatcgagttcatgggaaactcga 448 ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 358 cacgatgagatcgacattgagttcatggggaactcga 394
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 285 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 344 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 345 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 404 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 405 cgccacccacgacgagatcgacatcgagttcatggg 440 || | ||||||||||||||||||||||||||||| Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatggg 382
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 285 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 344 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 345 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 404 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 405 cgccacccacgacgagatcgacatcgagttcatggg 440 || | ||||||||||||||||||||||||||||| Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatggg 382
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 167 bits (84), Expect = 4e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 285 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 344 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 238 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 297 Query: 345 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 404 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 298 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 357 Query: 405 cgccacccacgacgagatcgacatcgagttcatggg 440 || | ||| |||||||||||||||||||||||||| Sbjct: 358 cgacggccatgacgagatcgacatcgagttcatggg 393
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 167 bits (84), Expect = 4e-38 Identities = 138/156 (88%) Strand = Plus / Plus Query: 285 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 344 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 226 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 285 Query: 345 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 404 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 286 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 345 Query: 405 cgccacccacgacgagatcgacatcgagttcatggg 440 || | ||| |||||||||||||||||||||||||| Sbjct: 346 cgacggccatgacgagatcgacatcgagttcatggg 381
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatggg 381
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatggg 386
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 8321897 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 8321956 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 8322016 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 8322017 ggcgacggccacgacgagatcgacatcgagttcatggg 8322054 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 340 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 8379189 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 8379142
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 220 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 279 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 339 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 340 ggcgacggccacgacgagatcgacatcgagttcatggg 377
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 62006 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 62065 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 62125 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 62126 ggcgacggccacgacgagatcgacatcgagttcatggg 62163 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 340 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 119298 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 119251
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatggg 386
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 163 bits (82), Expect = 6e-37 Identities = 139/158 (87%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 403 agcgccacccacgacgagatcgacatcgagttcatggg 440 ||| | |||||||||||||||||||||||||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatggg 381
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 133 bits (67), Expect = 5e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 292 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 351 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 133 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 192 Query: 352 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 411 | |||||||||||| || || |||||||||||||||||||| ||||||||| ||| | Sbjct: 193 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgagggcgacgag 252 Query: 412 cacgacgagatcgacatcgagttcatgggaaactc 446 ||||||||||||||||| ||||||||||| ||||| Sbjct: 253 cacgacgagatcgacatggagttcatgggcaactc 287
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 101 bits (51), Expect = 2e-18 Identities = 128/155 (82%), Gaps = 9/155 (5%) Strand = Plus / Plus Query: 292 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 351 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 306 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 365 Query: 352 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 411 | |||||||||||| || || |||||||||||||||||||| ||||||||| ||| Sbjct: 366 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgagggcg----- 420 Query: 412 cacgacgagatcgacatcgagttcatgggaaactc 446 ||||||||||||| ||||||||||| ||||| Sbjct: 421 ----acgagatcgacatggagttcatgggcaactc 451
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||||||||||||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 266 tccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 325 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 326 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcctggg 420
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||||||||||||| |||||||| || | |||||||||||| || || | | | ||| Sbjct: 160 tccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagatc 219 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 220 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 267 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 286 cacgacgagatcgacttcgagttcctggg 314
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 290 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 349 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 275 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 334 Query: 350 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 409 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 335 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 394 Query: 410 cccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||| ||||||||||| Sbjct: 395 ggcacgacgagatcgacatggagttcatggg 425
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 290 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 349 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 300 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 359 Query: 350 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 409 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 360 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 419 Query: 410 cccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||| ||||||||||| Sbjct: 420 ggcacgacgagatcgacatggagttcatggg 450
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 28749714 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 28749773 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 28749774 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 282 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 341 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 28761493 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 28761552 Query: 342 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 28761553 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 28773893 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatgggaaactc 446 ||||||||||||||| |||||||| |||| ||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaactc 13230436 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 28761710 cacgacgagatcgacttcgagttcctggg 28761738 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 355 ggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||| ||| |||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 57489 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 57548 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 57549 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 282 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 341 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 69268 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 69327 Query: 342 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 69328 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 81668 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 69485 cacgacgagatcgacttcgagttcctggg 69513
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 150280 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 150339 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 150340 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 60.0 bits (30), Expect = 6e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 282 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 341 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 162059 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 162118 Query: 342 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 162119 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 162276 cacgacgagatcgacttcgagttcctggg 162304
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 277 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 324 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 343 cacgacgagatcgacttcgagttcctggg 371
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 274 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 321 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 340 cacgacgagatcgacttcgagttcctggg 368
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 287 aagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctg 334 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacttcgagttcttggg 381
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 69.9 bits (35), Expect = 7e-09 Identities = 128/159 (80%) Strand = Plus / Plus Query: 290 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 349 |||||||||| ||||||| ||||||| | |||||||||| ||| |||||||||| Sbjct: 271 ccggcttcaactccaaggagcagtacctttacggcgagttcagcgtcgagatgaagctca 330 Query: 350 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 409 || || |||||||||||||||||| | | ||||||||| | |||||||| ||| | Sbjct: 331 tccgggggaactccgccggcaccgtctcgtgcttctacctctcttccggcgacggcgacg 390 Query: 410 cccacgacgagatcgacatcgagttcatgggaaactcga 448 | ||||||||||||||| ||||||||||| ||||||| Sbjct: 391 ggcgcgacgagatcgacatggagttcatgggcaactcga 429
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 355 ggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacccac 414 ||||||||||| |||||||| ||||||||||||||| | || ||||| | || ||| Sbjct: 379 ggcaactccgcgggcaccgtgacctccttctacctgtcgtcgggcgacgggcccgggcac 438 Query: 415 gacgagatcgacatcgagttcatggg 440 |||||||||||||| ||||||||||| Sbjct: 439 gacgagatcgacatggagttcatggg 464
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 154 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 213 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||| ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 214 aagttcgtccccggcaactccgccggcaccgtcaccaccttctac 258
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 113313 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 113474 cacgacgagatcgacttcgagttcctggg 113502
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 12932 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 13093 cacgacgagatcgacttcgagttcctggg 13121
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19010115 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 19010276 cacgacgagatcgacttcgagttcctggg 19010304
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 282 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 341 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 259 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 318 Query: 342 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 319 caagctcgtccccggcaactccgccggcaccgtcgccaccttctacctg 367 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 386 cacgacgagatcgacttcgagttcctggg 414
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19168764 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 19168925 cacgacgagatcgacttcgagttcctggg 19168953
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 326 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 373 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcttggg 420
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 344 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 10359114 cacgacgagatcgacttcgagttcctggg 10359142
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 344 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 1536 cacgacgagatcgacttcgagttcctggg 1564
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 344 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 124924 cacgacgagatcgacttcgagttcctggg 124952
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 340 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 ||||||||||||| |||| ||||||| ||||||||||| ||||||||||| Sbjct: 294 atgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctg 344
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 339 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 383
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 373
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 330 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 211 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 258 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 337 cacgacgagatcgacttcgagttcctggg 365
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 205 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 264 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 390 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 265 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 312 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatgggaaac 444 ||||||||||||||| |||||||| |||||||| Sbjct: 331 cacgacgagatcgacttcgagttcctgggaaac 363
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 330 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 32994 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 32947 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 32713 cacgacgagatcgacttcgagttcctggg 32685
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 330 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 30557286 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 30557239 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacc 378 |||||||||| || | |||||||||||||||||||| Sbjct: 30508603 aagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 30557005 cacgacgagatcgacttcgagttcctggg 30556977 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 30517192 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 408 cacccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||||| | |||||| |||| Sbjct: 30508424 cacccacgacgagatcgacctggagttcctggg 30508392 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 cgacggcaactccgccggcaccgtc 375 ||||||||| ||||||||||||||| Sbjct: 23253345 cgacggcaagtccgccggcaccgtc 23253369
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 330 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 279 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 326 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 405 cacgacgagatcgacttcgagttcctggg 433
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 355 ggcaactccgccggcaccgtcacctccttctacctg 390 |||||||||||||||||||||||| ||| ||||||| Sbjct: 381 ggcaactccgccggcaccgtcaccgcctactacctg 416
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 54.0 bits (27), Expect = 4e-04 Identities = 122/153 (79%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 342 ||||||||||||||| |||||||| | ||||||||| |||| || || | | | ||| Sbjct: 323 tccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagatc 382 Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 402 ||||| || ||| ||||| ||||||||||||||| |||||||||| | ||| || Sbjct: 383 aagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtccc---ag 439 Query: 403 agcgccacccacgacgagatcgacatcgagttc 435 || ||| |||||||||||||||| |||||||| Sbjct: 440 ggccccaaccacgacgagatcgacttcgagttc 472
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggc 324 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 273 tccggctcgggcttccagtccaaggcccagtacctctacggc 314 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 399 cacgacgagatcgacttcgagttcctggg 427 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 actccgccggcaccgtcacctccttcta 386 ||||||||||||||||| || ||||||| Sbjct: 349 actccgccggcaccgtcgccaccttcta 376
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggc 324 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 163 tccggctcgggcttccagtccaaggcccagtacctctacggc 204 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 414 cacgacgagatcgacttcgagttcctggg 442 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 actccgccggcaccgtcacctccttcta 386 ||||||||||||||||| || ||||||| Sbjct: 239 actccgccggcaccgtcgccaccttcta 266
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 283 tccggctccggcttcaagtccaaggccaagtacctcttcggc 324 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 280 tccggctcgggcttccagtccaaggcccagtacctctacggc 321 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 406 cacgacgagatcgacttcgagttcctggg 434 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 actccgccggcaccgtcacctccttcta 386 ||||||||||||||||| || ||||||| Sbjct: 356 actccgccggcaccgtcgccaccttcta 383
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 340 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 268 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 315
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacc 378 |||||||||| || | |||||||||||||||||||| Sbjct: 244 aagctcgtcgccgacgactccgccggcaccgtcacc 279 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 408 cacccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||||| | |||||| |||| Sbjct: 312 cacccacgacgagatcgacctggagttcctggg 344
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 340 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 186 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 139
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 186 cgaccagttcgaggtgatcggcga 209 |||||||||||||||||||||||| Sbjct: 155164 cgaccagttcgaggtgatcggcga 155187
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 186 cgaccagttcgaggtgatcggcga 209 |||||||||||||||||||||||| Sbjct: 500427 cgaccagttcgaggtgatcggcga 500450 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 186 cgaccagttcgaggtgatcggcga 209 |||||||||||||||||||||||| Sbjct: 405174 cgaccagttcgaggtgatcggcga 405151 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 gatgaagctcgtcgacggcaa 359 ||||||||||||||||||||| Sbjct: 1747182 gatgaagctcgtcgacggcaa 1747162
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacc 378 |||||||||| || | |||||||||||||||||||| Sbjct: 141980 aagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 150569 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 408 cacccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||||| | |||||| |||| Sbjct: 141801 cacccacgacgagatcgacctggagttcctggg 141769
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacc 378 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacc 378 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 342 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 408 cacccacgacgagatcgacatcgagttcatggg 440 ||||||||||||||||||| | |||||| |||| Sbjct: 375 cacccacgacgagatcgacctggagttcctggg 407
>ref|XM_958552.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 303 caaggccaagtacctcttcggcg 325 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>ref|XM_327089.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 303 caaggccaagtacctcttcggcg 325 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 303 caaggccaagtacctcttcggcg 325 ||||||||||||||||||||||| Sbjct: 58531 caaggccaagtacctcttcggcg 58553
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 89 cggcgaccatggcgccaaggtca 111 ||||||||||||||||||||||| Sbjct: 883550 cggcgaccatggcgccaaggtca 883528
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatgggaaactc 446 ||||||||||||||| |||||||| |||| ||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaactc 147624 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 355 ggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||| ||| |||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatgggaaactc 446 ||||||||||||||| |||||||| |||| ||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaactc 677 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 355 ggcaactccgccggcaccgtcacctccttctac 387 |||||||| ||||||||||||||| ||| |||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 411 ccacgacgagatcgacatcgagttcatggg 440 |||||||||||||||||| |||||| |||| Sbjct: 360 ccacgacgagatcgacatggagttcctggg 389
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 361 tccgccggcaccgtcacctccttctacctg 390 |||||||||||||||||| ||| ||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctg 392
>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial sequence Length = 236303 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 cctccttctacctgacctccgg 398 |||||||||||||||||||||| Sbjct: 202208 cctccttctacctgacctccgg 202229
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 411 ccacgacgagatcgacatcgagttcatggg 440 |||||||||||||||||| |||||| |||| Sbjct: 17438275 ccacgacgagatcgacatggagttcctggg 17438304
>gb|AC007401.4| Homo sapiens BAC clone RP11-501O7 from 2, complete sequence Length = 83656 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 cctccttctacctgacctccgg 398 |||||||||||||||||||||| Sbjct: 60552 cctccttctacctgacctccgg 60531
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 411 ccacgacgagatcgacatcgagttcatggg 440 |||||||||||||||||| |||||| |||| Sbjct: 106499 ccacgacgagatcgacatggagttcctggg 106528
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 220 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>ref|XM_472791.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 474 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 cgacggcaactccgccggcaccgtc 375 ||||||||| ||||||||||||||| Sbjct: 135 cgacggcaagtccgccggcaccgtc 159
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 ttcgaggtgatcggcgaccgcgacc 217 ||||||||| ||||||||||||||| Sbjct: 19260 ttcgaggtgctcggcgaccgcgacc 19284
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 cgaggtgatcggcgaccgcgaccac 219 ||||||| ||||||||||||||||| Sbjct: 30223 cgaggtggtcggcgaccgcgaccac 30199
>emb|BX294371.15| Zebrafish DNA sequence from clone CH211-263B6 in linkage group 5, complete sequence Length = 152696 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 taataataagcttcaggctaa 24 ||||||||||||||||||||| Sbjct: 78627 taataataagcttcaggctaa 78607
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 292 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctggg 102
>gb|AE004730.1| Pseudomonas aeruginosa PAO1, section 291 of 529 of the complete genome Length = 20021 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 cgaggtgatcggcgaccgcgaccacatcg 223 |||||||||||||| ||||||| |||||| Sbjct: 17835 cgaggtgatcggcgcccgcgactacatcg 17807
>dbj|AK119676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G11, full insert sequence Length = 757 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 cgacggcaactccgccggcaccgtc 375 ||||||||| ||||||||||||||| Sbjct: 220 cgacggcaagtccgccggcaccgtc 244
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 343 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 387 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 310 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>dbj|AK059231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E05, full insert sequence Length = 753 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 cgacggcaactccgccggcaccgtc 375 ||||||||| ||||||||||||||| Sbjct: 216 cgacggcaagtccgccggcaccgtc 240
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttcatggg 440 ||||||||||||||| |||||||| |||| Sbjct: 417 cacgacgagatcgacttcgagttcctggg 445
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 cgacggcaactccgccggcaccgtc 375 ||||||||| ||||||||||||||| Sbjct: 91498 cgacggcaagtccgccggcaccgtc 91522
>gb|AC167918.2| Mycosphaerella graminicola clone JGIBBWB-5F7, complete sequence Length = 32954 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 cgacgagatcgacatcgagt 433 |||||||||||||||||||| Sbjct: 21417 cgacgagatcgacatcgagt 21436
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggccaaggccgacttcgacg 187 |||||||||||||||||||| Sbjct: 2170872 ggccaaggccgacttcgacg 2170853
>ref|NM_187550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgaagctcgtcgacggcaactccg 364 ||||||||| |||||||||||||| Sbjct: 278 tgaagctcgacgacggcaactccg 301
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 cgaggtgatcggcgaccgcg 214 |||||||||||||||||||| Sbjct: 47016 cgaggtgatcggcgaccgcg 46997
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgaagctcgtcgacggcaactccg 364 ||||||||| |||||||||||||| Sbjct: 829621 tgaagctcgacgacggcaactccg 829644
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggccaaggccgacttcgacg 187 |||||||||||||||||||| Sbjct: 654195 ggccaaggccgacttcgacg 654176
>ref|XM_387049.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06873.1) partial mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 cgacgagatcgacatcgagt 433 |||||||||||||||||||| Sbjct: 351 cgacgagatcgacatcgagt 370
>gb|AF494052.1| Chlamydomonas reinhardtii thioredoxin reductase TR1 mRNA, complete cds Length = 2941 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ccaaggccgacttcgacgac 189 |||||||||||||||||||| Sbjct: 1563 ccaaggccgacttcgacgac 1582
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccgccggcaccgtcacctcc 381 |||||||||||||||||||| Sbjct: 18260 ccgccggcaccgtcacctcc 18241
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccgccggcaccgtcacctcc 381 |||||||||||||||||||| Sbjct: 78242 ccgccggcaccgtcacctcc 78223
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cgacttcgacgaccagttcg 196 |||||||||||||||||||| Sbjct: 3175019 cgacttcgacgaccagttcg 3175038
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgaagctcgtcgacggcaactccg 364 ||||||||| |||||||||||||| Sbjct: 829619 tgaagctcgacgacggcaactccg 829642
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 aactccgccggcaccgtcac 377 |||||||||||||||||||| Sbjct: 341 aactccgccggcaccgtcac 360
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 cacgacgagatcgacatcgagttc 435 ||||||||||||||| |||||||| Sbjct: 446 cacgacgagatcgacttcgagttc 469
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tcgctggagctcgaccagga 281 |||||||||||||||||||| Sbjct: 3136434 tcgctggagctcgaccagga 3136453 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cgccacccacgacgagatcg 424 |||||||||||||||||||| Sbjct: 2262247 cgccacccacgacgagatcg 2262228
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cctccggcgagagcgccacc 411 |||||||||||||||||||| Sbjct: 80401 cctccggcgagagcgccacc 80420
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgaagctcgtcgacggcaactccg 364 ||||||||| |||||||||||||| Sbjct: 125166 tgaagctcgacgacggcaactccg 125189
>dbj|AK107855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B01, full insert sequence Length = 767 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 tgaagctcgtcgacggcaactccg 364 ||||||||| |||||||||||||| Sbjct: 274 tgaagctcgacgacggcaactccg 297
>dbj|AK067158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M16, full insert sequence Length = 2073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cttctacctgacctccggcg 400 |||||||||||||||||||| Sbjct: 189 cttctacctgacctccggcg 170
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 acgagatcgacatcgagttc 435 |||||||||||||||||||| Sbjct: 110345 acgagatcgacatcgagttc 110364
>dbj|D82039.1| Oryza sativa mRNA for OSK1, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cttctacctgacctccggcg 400 |||||||||||||||||||| Sbjct: 183 cttctacctgacctccggcg 164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,297,964 Number of Sequences: 3902068 Number of extensions: 2297964 Number of successful extensions: 47695 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46274 Number of HSP's gapped (non-prelim): 1412 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
