ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65a11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 428 bits (216), Expect = e-117 Identities = 339/380 (89%) Strand = Plus / Plus Query: 32 cgtacagcttcgccgggatggggtgcagcgccggcacggtgggcatcgacatggcggcgc 91 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 582 cgtacagcctcgccgggatggggtgcagcgccggcacggtggggatcgacatggcggcga 641 Query: 92 ggctgctgcgcgtgcagcgccgcccggggtacgcgctggtggtggtgacggagaacacca 151 || |||||| ||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 642 gggcgctgcgggtgtcgcggcggggcgggtacgcgctggtggtggtgacggagaacatga 701 Query: 152 gcctcaactggtacttcgggaacaacaagcacatgctggtgaccaactgcatcttccgcg 211 |||| |||||||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 702 gcctgaactggtacttcggcgagaacaagcacatgctggtgacaaactgcatcttccggg 761 Query: 212 tcggcagcgcggcggcgctcatcaccgacgtgcccgcgcgccgggccgacgccaagtacc 271 | ||||||||||||||||| | ||||||||| | ||||| || | ||||||||||||| Sbjct: 762 tgggcagcgcggcggcgctggtgaccgacgtggcggcgcggcgcggcgacgccaagtacg 821 Query: 272 agctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtacaacgccgccg 331 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 822 agctggtgcgcacgctgcggacgcaccacggcggcgacgacgcggcgtacaacgccgccg 881 Query: 332 tgcagatggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcg 391 ||||||||||||||||||| || ||| ||||| |||||||||||||||||||| |||| Sbjct: 882 tgcagatggaggacgaggaggggaacgtcggcgtcgcgctcaccaaggacctcgtccgcg 941 Query: 392 tcgccggcgccggcctccgc 411 |||||||||| ||||||||| Sbjct: 942 tcgccggcgcgggcctccgc 961
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 428 bits (216), Expect = e-117 Identities = 339/380 (89%) Strand = Plus / Minus Query: 32 cgtacagcttcgccgggatggggtgcagcgccggcacggtgggcatcgacatggcggcgc 91 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 11695247 cgtacagcctcgccgggatggggtgcagcgccggcacggtggggatcgacatggcggcga 11695188 Query: 92 ggctgctgcgcgtgcagcgccgcccggggtacgcgctggtggtggtgacggagaacacca 151 || |||||| ||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 11695187 gggcgctgcgggtgtcgcggcggggcgggtacgcgctggtggtggtgacggagaacatga 11695128 Query: 152 gcctcaactggtacttcgggaacaacaagcacatgctggtgaccaactgcatcttccgcg 211 |||| |||||||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 11695127 gcctgaactggtacttcggcgagaacaagcacatgctggtgacaaactgcatcttccggg 11695068 Query: 212 tcggcagcgcggcggcgctcatcaccgacgtgcccgcgcgccgggccgacgccaagtacc 271 | ||||||||||||||||| | ||||||||| | ||||| || | ||||||||||||| Sbjct: 11695067 tgggcagcgcggcggcgctggtgaccgacgtggcggcgcggcgcggcgacgccaagtacg 11695008 Query: 272 agctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtacaacgccgccg 331 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 11695007 agctggtgcgcacgctgcggacgcaccacggcggcgacgacgcggcgtacaacgccgccg 11694948 Query: 332 tgcagatggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcg 391 ||||||||||||||||||| || ||| ||||| |||||||||||||||||||| |||| Sbjct: 11694947 tgcagatggaggacgaggaggggaacgtcggcgtcgcgctcaccaaggacctcgtccgcg 11694888 Query: 392 tcgccggcgccggcctccgc 411 |||||||||| ||||||||| Sbjct: 11694887 tcgccggcgcgggcctccgc 11694868 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 17335482 tcgccggcgccggcctccgc 17335501
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 428 bits (216), Expect = e-117 Identities = 339/380 (89%) Strand = Plus / Minus Query: 32 cgtacagcttcgccgggatggggtgcagcgccggcacggtgggcatcgacatggcggcgc 91 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129881 cgtacagcctcgccgggatggggtgcagcgccggcacggtggggatcgacatggcggcga 129822 Query: 92 ggctgctgcgcgtgcagcgccgcccggggtacgcgctggtggtggtgacggagaacacca 151 || |||||| ||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 129821 gggcgctgcgggtgtcgcggcggggcgggtacgcgctggtggtggtgacggagaacatga 129762 Query: 152 gcctcaactggtacttcgggaacaacaagcacatgctggtgaccaactgcatcttccgcg 211 |||| |||||||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 129761 gcctgaactggtacttcggcgagaacaagcacatgctggtgacaaactgcatcttccggg 129702 Query: 212 tcggcagcgcggcggcgctcatcaccgacgtgcccgcgcgccgggccgacgccaagtacc 271 | ||||||||||||||||| | ||||||||| | ||||| || | ||||||||||||| Sbjct: 129701 tgggcagcgcggcggcgctggtgaccgacgtggcggcgcggcgcggcgacgccaagtacg 129642 Query: 272 agctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtacaacgccgccg 331 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 129641 agctggtgcgcacgctgcggacgcaccacggcggcgacgacgcggcgtacaacgccgccg 129582 Query: 332 tgcagatggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcg 391 ||||||||||||||||||| || ||| ||||| |||||||||||||||||||| |||| Sbjct: 129581 tgcagatggaggacgaggaggggaacgtcggcgtcgcgctcaccaaggacctcgtccgcg 129522 Query: 392 tcgccggcgccggcctccgc 411 |||||||||| ||||||||| Sbjct: 129521 tcgccggcgcgggcctccgc 129502
>dbj|AK105487.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B09, full insert sequence Length = 1737 Score = 420 bits (212), Expect = e-114 Identities = 338/380 (88%) Strand = Plus / Plus Query: 32 cgtacagcttcgccgggatggggtgcagcgccggcacggtgggcatcgacatggcggcgc 91 |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 582 cgtacagcctcgccgggatggggtgcagcgccggcatggtggggatcgacatggcggcga 641 Query: 92 ggctgctgcgcgtgcagcgccgcccggggtacgcgctggtggtggtgacggagaacacca 151 || |||||| ||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 642 gggcgctgcgggtgtcgcggcggggcgggtacgcgctggtggtggtgacggagaacatga 701 Query: 152 gcctcaactggtacttcgggaacaacaagcacatgctggtgaccaactgcatcttccgcg 211 |||| |||||||||||||| | |||||||||||||||||||| |||||||||||||| | Sbjct: 702 gcctgaactggtacttcggcgagaacaagcacatgctggtgacaaactgcatcttccggg 761 Query: 212 tcggcagcgcggcggcgctcatcaccgacgtgcccgcgcgccgggccgacgccaagtacc 271 | ||||||||||||||||| | ||||||||| | ||||| || | ||||||||||||| Sbjct: 762 tgggcagcgcggcggcgctggtgaccgacgtggcggcgcggcgcggcgacgccaagtacg 821 Query: 272 agctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtacaacgccgccg 331 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 822 agctggtgcgcacgctgcggacgcaccacggcggcgacgacgcggcgtacaacgccgccg 881 Query: 332 tgcagatggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcg 391 ||||||||||||||||||| || ||| ||||| |||||||||||||||||||| |||| Sbjct: 882 tgcagatggaggacgaggaggggaacgtcggcgtcgcgctcaccaaggacctcgtccgcg 941 Query: 392 tcgccggcgccggcctccgc 411 |||||||||| ||||||||| Sbjct: 942 tcgccggcgcgggcctccgc 961
>gb|AY020444.1| Oryza sativa microsatellite MRG2769 containing (GA)X18, closest to marker S13922, genomic sequence Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 371 tcaccaaggacctcgtgcgcgtcgccggcgccggcctccgc 411 |||||||||||||||| |||||||||||||| ||||||||| Sbjct: 236 tcaccaaggacctcgtccgcgtcgccggcgcgggcctccgc 196
>ref|XM_468364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 ggacgacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||||| |||||||| | || |||||||||||||||||||||| Sbjct: 536 ggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgg 583
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 262 gccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtac 321 |||||||||||||| |||| |||| | ||||||||||| |||||||||||| ||||||| Sbjct: 4855 gccaagtaccagctactgcacacggtacggacgcaccagggcgccgacgaccgggcgtac 4914
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 262 gccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgacgcggcgtac 321 |||||||||||||| |||| |||| | ||||||||||| |||||||||||| ||||||| Sbjct: 10792 gccaagtaccagctactgcacacggtacggacgcaccagggcgccgacgaccgggcgtac 10733
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 ggacgacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||||| |||||||| | || |||||||||||||||||||||| Sbjct: 34872815 ggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgg 34872862 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||| ||||| ||| |||| ||||||||||| | |||| ||||||| Sbjct: 5931432 ccaagtacgagctggtgcacacggtgcggacgcacaagggcggcgacgac 5931383
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 ggacgacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||||| |||||||| | || |||||||||||||||||||||| Sbjct: 94410 ggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgg 94457
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 ggacgacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||||| |||||||| | || |||||||||||||||||||||| Sbjct: 32312 ggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgg 32359
>dbj|AK107210.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C01, full insert sequence Length = 1708 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 18 ggacgacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||||| |||||||| | || |||||||||||||||||||||| Sbjct: 536 ggacgacgtcatggcgtacaacctctccgggatggggtgcagcgccgg 583
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 184 atgctggtgaccaactgcatcttccgcgtcggcagcgcggcggcgct 230 |||||| || ||||||||||||||||| | ||| ||||||||||||| Sbjct: 874 atgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgct 920 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||| ||| || | ||| ||| ||||||||||||||||| Sbjct: 715 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgg 758
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 184 atgctggtgaccaactgcatcttccgcgtcggcagcgcggcggcgct 230 |||||| || ||||||||||||||||| | ||| ||||||||||||| Sbjct: 72447 atgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgct 72401 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||| ||| || | ||| ||| ||||||||||||||||| Sbjct: 72606 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgg 72563
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 184 atgctggtgaccaactgcatcttccgcgtcggcagcgcggcggcgct 230 |||||| || ||||||||||||||||| | ||| ||||||||||||| Sbjct: 3639606 atgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgct 3639560 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Minus Query: 120 gtacgcgctggtggtggtgacggagaacaccagcctcaactggtacttcgggaacaacaa 179 |||||||||||||||| |||||||||| || ||| ||| |||| | || |||||| Sbjct: 14047448 gtacgcgctggtggtgagcacggagaacatcaccctgaacgcgtacatgggcaacaaccg 14047389 Query: 180 gcacatgctggtgaccaactgcatcttccgcgtcggcagcgcggcg 225 || ||||||||||||||| | | |||||||||||| |||||||| Sbjct: 14047388 gccgatgctggtgaccaacaccctgttccgcgtcggcggcgcggcg 14047343 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||| | | |||| |||| || |||| ||||||| ||||| Sbjct: 14047304 cgccaagtaccagctgatccacacggtgcgcacccaccgcggcgcccacgac 14047253 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||| ||| || | ||| ||| ||||||||||||||||| Sbjct: 3639765 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgg 3639722
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 184 atgctggtgaccaactgcatcttccgcgtcggcagcgcggcggcgct 230 |||||| || ||||||||||||||||| | ||| ||||||||||||| Sbjct: 3639527 atgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgct 3639481 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Minus Query: 120 gtacgcgctggtggtggtgacggagaacaccagcctcaactggtacttcgggaacaacaa 179 |||||||||||||||| |||||||||| || ||| ||| |||| | || |||||| Sbjct: 14055690 gtacgcgctggtggtgagcacggagaacatcaccctgaacgcgtacatgggcaacaaccg 14055631 Query: 180 gcacatgctggtgaccaactgcatcttccgcgtcggcagcgcggcg 225 || ||||||||||||||| | | |||||||||||| |||||||| Sbjct: 14055630 gccgatgctggtgaccaacaccctgttccgcgtcggcggcgcggcg 14055585 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||| | | |||| |||| || |||| ||||||| ||||| Sbjct: 14055546 cgccaagtaccagctgatccacacggtgcgcacccaccgcggcgcccacgac 14055495 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccgg 65 ||||||||| ||| || | ||| ||| ||||||||||||||||| Sbjct: 3639686 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgg 3639643
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||| ||| ||| |||| ||||||| ||||||||||||| Sbjct: 935 ccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgac 984
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 120 gtacgcgctggtggtggtgacggagaacaccagcctcaactggtacttcgggaacaacaa 179 |||||||||||||||| |||||||||| || ||| ||| |||| | || |||||| Sbjct: 771 gtacgcgctggtggtgagcacggagaacatcaccctgaacgcgtacatgggcaacaaccg 830 Query: 180 gcacatgctggtgaccaactgcatcttccgcgtcggcagcgcggcg 225 || ||||||||||||||| | | |||||||||||| |||||||| Sbjct: 831 gccgatgctggtgaccaacaccctgttccgcgtcggcggcgcggcg 876 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||| | | |||| |||| || |||| ||||||| ||||| Sbjct: 915 cgccaagtaccagctgatccacacggtgcgcacccaccgcggcgcccacgac 966
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||| ||| ||| |||| ||||||| ||||||||||||| Sbjct: 40661 ccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgac 40612
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 339 ggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcgtcgccgg 398 ||||||||| | || |||||| ||||| |||||| ||||||||||| || ||||||||| Sbjct: 138633 ggaggacgacgccgccggcgtcggcgtcgcgctctccaaggacctcatggccgtcgccgg 138574 Query: 399 cg 400 || Sbjct: 138573 cg 138572 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||||||| |||| |||| || ||| |||||||| |||| Sbjct: 138711 cgccaagtaccagctgctgcacacggtgcgcacccacagcggcgccgccgac 138660
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 339 ggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcgtcgccgg 398 ||||||||| | || |||||| ||||| |||||| ||||||||||| || ||||||||| Sbjct: 21615114 ggaggacgacgccgccggcgtcggcgtcgcgctctccaaggacctcatggccgtcgccgg 21615055 Query: 399 cg 400 || Sbjct: 21615054 cg 21615053 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||||||| |||| |||| || ||| |||||||| |||| Sbjct: 21615192 cgccaagtaccagctgctgcacacggtgcgcacccacagcggcgccgccgac 21615141
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||| ||| ||| |||| ||||||| ||||||||||||| Sbjct: 28405737 ccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgac 28405688 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 cgggatggggtgcagcgccggc 66 |||||||||||||||||||||| Sbjct: 28059946 cgggatggggtgcagcgccggc 28059925 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 194 ccaactgcatcttccgcgtcggcagcgcggcgg 226 |||||||| | |||||||||||| ||||||||| Sbjct: 28059800 ccaactgcctgttccgcgtcggcggcgcggcgg 28059768
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Minus Query: 120 gtacgcgctggtggtggtgacggagaacaccagcctcaactggtacttcgggaacaacaa 179 |||||||||||||||| |||||||||| || ||| ||| |||| | || |||||| Sbjct: 63577 gtacgcgctggtggtgagcacggagaacatcaccctgaacgcgtacatgggcaacaaccg 63518 Query: 180 gcacatgctggtgaccaactgcatcttccgcgtcggcagcgcggcg 225 || ||||||||||||||| | | |||||||||||| |||||||| Sbjct: 63517 gccgatgctggtgaccaacaccctgttccgcgtcggcggcgcggcg 63472 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||| | | |||| |||| || |||| ||||||| ||||| Sbjct: 63433 cgccaagtaccagctgatccacacggtgcgcacccaccgcggcgcccacgac 63382
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 339 ggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcgtcgccgg 398 ||||||||| | || |||||| ||||| |||||| ||||||||||| || ||||||||| Sbjct: 735 ggaggacgacgccgccggcgtcggcgtcgcgctctccaaggacctcatggccgtcgccgg 794 Query: 399 cg 400 || Sbjct: 795 cg 796 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||||||| |||| |||| || ||| |||||||| |||| Sbjct: 657 cgccaagtaccagctgctgcacacggtgcgcacccacagcggcgccgccgac 708
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 120 gtacgcgctggtggtggtgacggagaacaccagcctcaactggtacttcgggaacaacaa 179 |||||||||||||||| |||||||||| || ||| ||| |||| | || |||||| Sbjct: 42 gtacgcgctggtggtgagcacggagaacatcaccctgaacgcgtacatgggcaacaaccg 101 Query: 180 gcacatgctggtgaccaactgcatcttccgcgtcggcagcgcggcg 225 || ||||||||||||||| | | |||||||||||| |||||||| Sbjct: 102 gccgatgctggtgaccaacaccctgttccgcgtcggcggcgcggcg 147 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||| | | |||| |||| || |||| ||||||| ||||| Sbjct: 186 cgccaagtaccagctgatccacacggtgcgcacccaccgcggcgcccacgac 237
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||| ||| ||| |||| ||||||| ||||||||||||| Sbjct: 1394 ccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgac 1443
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 339 ggaggacgaggacggcggcgtgggcgtggcgctcaccaaggacctcgtgcgcgtcgccgg 398 ||||||||| | || |||||| ||||| |||||| ||||||||||| || ||||||||| Sbjct: 21925313 ggaggacgacgccgccggcgtcggcgtcgcgctctccaaggacctcatggccgtcgccgg 21925254 Query: 399 cg 400 || Sbjct: 21925253 cg 21925252 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||||||||||||||| |||| |||| || ||| |||||||| |||| Sbjct: 21925391 cgccaagtaccagctgctgcacacggtgcgcacccacagcggcgccgccgac 21925340
>ref|XM_470771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 34 tacagcttcgccgggatggggtgcagcgc 62 |||||| |||||||||||||||||||||| Sbjct: 544 tacagcctcgccgggatggggtgcagcgc 572
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 220 gcggcggcgctcatcaccgacgtgcccgc 248 |||||||||| |||||||||||||||||| Sbjct: 2836524 gcggcggcgcgcatcaccgacgtgcccgc 2836496
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 34 tacagcttcgccgggatggggtgcagcgc 62 |||||| |||||||||||||||||||||| Sbjct: 14988674 tacagcctcgccgggatggggtgcagcgc 14988702 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 7657471 acggagaacatcaccctcaactggtacttcgg 7657440 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 15047583 ggcgtacaacctctccgggatggggtgcagcgcc 15047616 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 15033443 ggcgtacaacctctccgggatggggtgcagcgcc 15033410 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 7657585 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 7657541 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tgcgcgtcgccggcgccggc 405 |||||||||||||||||||| Sbjct: 9996204 tgcgcgtcgccggcgccggc 9996185 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcg 304 |||||||||||||||| ||| |||| |||| || |||| ||||| Sbjct: 3387901 cgccaagtaccagctgatgcacacggtgcgcacccaccgcggcg 3387944
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 34 tacagcttcgccgggatggggtgcagcgc 62 |||||| |||||||||||||||||||||| Sbjct: 54088 tacagcctcgccgggatggggtgcagcgc 54060 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 9319 ggcgtacaacctctccgggatggggtgcagcgcc 9352
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 34 tacagcttcgccgggatggggtgcagcgc 62 |||||| |||||||||||||||||||||| Sbjct: 14983208 tacagcctcgccgggatggggtgcagcgc 14983236 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 7655306 acggagaacatcaccctcaactggtacttcgg 7655275 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 15042117 ggcgtacaacctctccgggatggggtgcagcgcc 15042150 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 15027977 ggcgtacaacctctccgggatggggtgcagcgcc 15027944 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 7655420 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 7655376 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tgcgcgtcgccggcgccggc 405 |||||||||||||||||||| Sbjct: 9994325 tgcgcgtcgccggcgccggc 9994306 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcg 304 |||||||||||||||| ||| |||| |||| || |||| ||||| Sbjct: 3388012 cgccaagtaccagctgatgcacacggtgcgcacccaccgcggcg 3388055
>gb|AE004580.1| Pseudomonas aeruginosa PAO1, section 141 of 529 of the complete genome Length = 15247 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 79 gacatggcggcgcggctgctgcgcg 103 ||||||||||||||||||||||||| Sbjct: 9683 gacatggcggcgcggctgctgcgcg 9659
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 380 acctcgtgcgcgtcgccggcgccggcct 407 |||||||| ||||||||||||||||||| Sbjct: 3303844 acctcgtgtgcgtcgccggcgccggcct 3303817
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 57819 acggagaacatcaccctcaactggtacttcgg 57850 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 57705 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 57749
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 969 acggagaacatcaccctcaactggtacttcgg 1000 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 855 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 899
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 969 acggagaacatcaccctcaactggtacttcgg 1000 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 855 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 899
>dbj|AK111566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074J05, full insert sequence Length = 1556 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||||||||||||||| Sbjct: 968 acggagaacatcaccctcaactggtacttcgg 999 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 22 gacgtcaaggcgtacagcttcgccgggatggggtgcagcgccggc 66 ||||||||| ||| || | ||| ||| |||||||||||||||||| Sbjct: 854 gacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggc 898
>emb|Y17794.1|GGY17794 Gallus gallus mRNA for transcription factor cFKH-1 Length = 1970 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 cgccgcttcaagatgaaggacgacgtcaagg 31 ||||||||||||| |||||||| |||||||| Sbjct: 397 cgccgcttcaagaagaaggacgccgtcaagg 427
>ref|NM_205006.1| Gallus gallus winged-helix transcription factor (CFKH-1), mRNA Length = 1970 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 cgccgcttcaagatgaaggacgacgtcaagg 31 ||||||||||||| |||||||| |||||||| Sbjct: 397 cgccgcttcaagaagaaggacgccgtcaagg 427
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||| ||||| ||| |||| ||||||||||| | |||| ||||||| Sbjct: 1034 ccaagtacgagctggtgcacacggtgcggacgcacaagggcggcgacgac 1083
>ref|XM_470781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 489 ggcgtacaacctctccgggatggggtgcagcgcc 522
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 cgggatggggtgcagcgccggc 66 |||||||||||||||||||||| Sbjct: 140111 cgggatggggtgcagcgccggc 140090 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 194 ccaactgcatcttccgcgtcggcagcgcggcgg 226 |||||||| | |||||||||||| ||||||||| Sbjct: 139965 ccaactgcctgttccgcgtcggcggcgcggcgg 139933
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cggcacggtgggcatcgacatg 84 |||||||||||||||||||||| Sbjct: 830761 cggcacggtgggcatcgacatg 830782
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cggcacggtgggcatcgacatg 84 |||||||||||||||||||||| Sbjct: 3632738 cggcacggtgggcatcgacatg 3632717 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 agatggaggacgaggacggc 354 |||||||||||||||||||| Sbjct: 4634548 agatggaggacgaggacggc 4634529
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 121330 ggcgtacaacctctccgggatggggtgcagcgcc 121363 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 107190 ggcgtacaacctctccgggatggggtgcagcgcc 107157
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||| ||||| ||| |||| ||||||||||| | |||| ||||||| Sbjct: 109653 ccaagtacgagctggtgcacacggtgcggacgcacaagggcggcgacgac 109604
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||| ||||| ||| |||| ||||||||||| | |||| ||||||| Sbjct: 161234 ccaagtacgagctggtgcacacggtgcggacgcacaagggcggcgacgac 161185
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cgggatggggtgcagcgccggc 66 |||||||||||||||||||||| Sbjct: 964 cgggatggggtgcagcgccggc 985 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 194 ccaactgcatcttccgcgtcggcagcgcggcgg 226 |||||||| | |||||||||||| ||||||||| Sbjct: 1110 ccaactgcctgttccgcgtcggcggcgcggcgg 1142
>dbj|AK110079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-F07, full insert sequence Length = 4087 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 cggcgtgggcgtggcgctcacc 375 |||||||||||||||||||||| Sbjct: 3679 cggcgtgggcgtggcgctcacc 3658
>dbj|AK107106.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A11, full insert sequence Length = 1788 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 1191 ggcgtacaacctctccgggatggggtgcagcgcc 1158
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cgggatggggtgcagcgccggc 66 |||||||||||||||||||||| Sbjct: 965 cgggatggggtgcagcgccggc 986 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 194 ccaactgcatcttccgcgtcggcagcgcggcgg 226 |||||||| | |||||||||||| ||||||||| Sbjct: 1111 ccaactgcctgttccgcgtcggcggcgcggcgg 1143
>dbj|AK071506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093M02, full insert sequence Length = 1666 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 30 ggcgtacagcttcgccgggatggggtgcagcgcc 63 |||||||| | || |||||||||||||||||||| Sbjct: 527 ggcgtacaacctctccgggatggggtgcagcgcc 560
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 263 ccaagtaccagctgctgcgcacgctgcggacgcaccacggcgccgacgac 312 |||||||| ||||| ||| |||| ||||||||||| | |||| ||||||| Sbjct: 1034 ccaagtacgagctggtgcacacggtgcggacgcacaagggcggcgacgac 1083
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcaccacggcgccgacgacgc 314 ||||||||||||||||||||| Sbjct: 152558 gcaccacggcgccgacgacgc 152538
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 231 catcaccgacgtgcccgcgcgccgggccg 259 |||| ||||||||||||||||| |||||| Sbjct: 3010022 catcgccgacgtgcccgcgcgctgggccg 3010050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cgcaccacggcgccgacgac 312 |||||||||||||||||||| Sbjct: 2107516 cgcaccacggcgccgacgac 2107535
>ref|XM_473802.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 cgcgtcgccggcgccggcctc 408 ||||||||||||||||||||| Sbjct: 278 cgcgtcgccggcgccggcctc 258
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcctc 408 ||||||||||||||||||||| Sbjct: 26607 cgcgtcgccggcgccggcctc 26627
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcctc 408 ||||||||||||||||||||| Sbjct: 116270 cgcgtcgccggcgccggcctc 116290
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcctc 408 ||||||||||||||||||||| Sbjct: 44293 cgcgtcgccggcgccggcctc 44313
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcctc 408 ||||||||||||||||||||| Sbjct: 30640562 cgcgtcgccggcgccggcctc 30640582 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacctcgtgcgcgtcgccgg 398 |||||||||||||||||||| Sbjct: 22177025 gacctcgtgcgcgtcgccgg 22177006 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 cgccggcgccggcctccgcagcca 416 ||||||||||||||||||| |||| Sbjct: 16092644 cgccggcgccggcctccgccgcca 16092667
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 catggcggcgcggctgctgcg 101 ||||||||||||||||||||| Sbjct: 20142865 catggcggcgcggctgctgcg 20142845 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ggacgaggacggcggcgtgg 361 |||||||||||||||||||| Sbjct: 23092080 ggacgaggacggcggcgtgg 23092099 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 1401379 tcgccggcgccggcctccgc 1401398
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cacggcgccgacgacgcggcg 318 ||||||||||||||||||||| Sbjct: 6631887 cacggcgccgacgacgcggcg 6631867 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgcaccacggcgccgacgacg 313 ||||||||||||||||||||| Sbjct: 1039110 cgcaccacggcgccgacgacg 1039090
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0007G12 Length = 111819 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 catggcggcgcggctgctgcg 101 ||||||||||||||||||||| Sbjct: 8865 catggcggcgcggctgctgcg 8845
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 catggcggcgcggctgctgcg 101 ||||||||||||||||||||| Sbjct: 131139 catggcggcgcggctgctgcg 131119
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 215 gcagcgcggcggcgctcatcaccga 239 ||||||||||||||| ||||||||| Sbjct: 1916574 gcagcgcggcggcgcgcatcaccga 1916550
>dbj|AK065374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003B24, full insert sequence Length = 1884 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 catggcggcgcggctgctgcg 101 ||||||||||||||||||||| Sbjct: 1587 catggcggcgcggctgctgcg 1607
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 ggacggcggcgtgggcgtggc 368 ||||||||||||||||||||| Sbjct: 32999 ggacggcggcgtgggcgtggc 32979
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 tggcggcgcggctgctgcgcg 103 ||||||||||||||||||||| Sbjct: 4699631 tggcggcgcggctgctgcgcg 4699611
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 302 gcgccgacgacgcggcgtacaacgccgcc 330 |||||||||||||||||| || ||||||| Sbjct: 716466 gcgccgacgacgcggcgttcagcgccgcc 716438
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 gccgtgcagatggaggacgag 348 ||||||||||||||||||||| Sbjct: 1460848 gccgtgcagatggaggacgag 1460828
>dbj|AB070956.1| Streptomyces avermitilis peptide-7 biosynthetic gene cluster Length = 54101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgcaccacggcgccgacgacg 313 ||||||||||||||||||||| Sbjct: 50942 cgcaccacggcgccgacgacg 50922
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcg 304 |||||||||||||||| ||| |||| |||| || |||| ||||| Sbjct: 867 cgccaagtaccagctgatgcacacggtgcgcacccaccgcggcg 910
>ref|XM_472644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacctcgtgcgcgtcgccgg 398 |||||||||||||||||||| Sbjct: 267 gacctcgtgcgcgtcgccgg 248
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccacggcgccgacgacgcgg 316 |||||||||||||||||||| Sbjct: 3197657 ccacggcgccgacgacgcgg 3197638 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggcgcggctgctgcgcgtgcag 108 ||||||||||||||||||| |||| Sbjct: 2712964 gcggcgcggctgctgcgcgcgcag 2712987
>gb|AY308830.1| Marchantia polymorpha FAE3 gene, complete cds Length = 10158 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 acggagaacaccagcctcaactggtacttcgg 170 |||||||||| || |||||| ||||||||||| Sbjct: 4918 acggagaacatcaccctcaattggtacttcgg 4949
>gb|AY658967.1| Synthetic construct Peudomonas aeruginosa clone FLH042574.01F PA1205 gene, partial cds Length = 948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcggcgtgggcgtggcgctc 372 |||||||||||||||||||| Sbjct: 404 gcggcgtgggcgtggcgctc 385
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggcgcggctgctgcgcgtgcag 108 ||||||||||||||||||| |||| Sbjct: 4085452 gcggcgcggctgctgcgcgcgcag 4085475 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccacggcgccgacgacgcgg 316 |||||||||||||||||||| Sbjct: 783493 ccacggcgccgacgacgcgg 783512
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ggcgcggctgctgcgcgtgc 106 |||||||||||||||||||| Sbjct: 1943769 ggcgcggctgctgcgcgtgc 1943750
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 tgcgcgtcgccggcgccggc 405 |||||||||||||||||||| Sbjct: 46120 tgcgcgtcgccggcgccggc 46101
>emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chromosome 10 Contains the cathepsin L-like 1 (CTSLL1) pseudogene, a novel gene, a pseudogene similar to part of ring finger protein 3 (RNF3), the 5' end of the MINPP1 gene for multiple inositol polyphosphate histidine phosphatase 1 and a CpG island, complete sequence Length = 173390 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cttcgggaacaacaagcaca 184 |||||||||||||||||||| Sbjct: 127525 cttcgggaacaacaagcaca 127544
>ref|XM_776751.1| PREDICTED: Strongylocentrotus purpuratus similar to KPL2 protein isoform 1 (LOC576444), mRNA Length = 3023 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggccgacgccaagtaccag 273 |||||||||||||||||||| Sbjct: 1411 gggccgacgccaagtaccag 1430
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcg 304 |||||||||||||||| ||| |||| |||| || |||| ||||| Sbjct: 41313 cgccaagtaccagctgatgcacacggtgcgcacccaccgcggcg 41270
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcct 407 |||||||||||||||||||| Sbjct: 261848 cgcgtcgccggcgccggcct 261867
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cgcgtcgccggcgccggcct 407 |||||||||||||||||||| Sbjct: 173316 cgcgtcgccggcgccggcct 173335
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggcgcggctgctgcgcgtgcag 108 ||||||||||||||||||| |||| Sbjct: 3792039 gcggcgcggctgctgcgcgcgcag 3792062 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccacggcgccgacgacgcgg 316 |||||||||||||||||||| Sbjct: 592139 ccacggcgccgacgacgcgg 592158
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccacggcgccgacgacgcgg 316 |||||||||||||||||||| Sbjct: 288818 ccacggcgccgacgacgcgg 288799 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ggcggcgcggctgctgcgcg 103 |||||||||||||||||||| Sbjct: 120221 ggcggcgcggctgctgcgcg 120202
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ggaggacgaggacggcggcg 358 |||||||||||||||||||| Sbjct: 207453 ggaggacgaggacggcggcg 207434
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cggcgccgacgacgcggcgt 319 |||||||||||||||||||| Sbjct: 65279 cggcgccgacgacgcggcgt 65260
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 cgccggcgccggcctccgcagcca 416 ||||||||||||||||||| |||| Sbjct: 53394 cgccggcgccggcctccgccgcca 53417
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cggcagcgcggcggcgctca 232 |||||||||||||||||||| Sbjct: 4907611 cggcagcgcggcggcgctca 4907592
>gb|AE011992.1| Xanthomonas axonopodis pv. citri str. 306, section 370 of 469 of the complete genome Length = 10571 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 ggcacggtgggcatcgacatggcggcgc 91 ||||||||||||||||| ||||||||| Sbjct: 6155 ggcacggtgggcatcgagctggcggcgc 6182
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 caccacggcgccgacgacgcggcg 318 |||||| ||||||||||||||||| Sbjct: 1902356 caccaccgcgccgacgacgcggcg 1902333
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cgtcgccggcgccggcctcc 409 |||||||||||||||||||| Sbjct: 1425381 cgtcgccggcgccggcctcc 1425400
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgaggacggcggcgtgggcg 364 |||||||||||||||||||| Sbjct: 12192282 cgaggacggcggcgtgggcg 12192301
>gb|AE004550.1| Pseudomonas aeruginosa PAO1, section 111 of 529 of the complete genome Length = 10840 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcggcgtgggcgtggcgctc 372 |||||||||||||||||||| Sbjct: 7706 gcggcgtgggcgtggcgctc 7687
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 agatggaggacgaggacggcggcg 358 |||| ||||||||||||||||||| Sbjct: 2614057 agatcgaggacgaggacggcggcg 2614034
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 8665 tcgccggcgccggcctccgc 8684
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 109918 tcgccggcgccggcctccgc 109937
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tggcggcgcggctgctgcgc 102 |||||||||||||||||||| Sbjct: 3956062 tggcggcgcggctgctgcgc 3956043 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ggacctcgtgcgcgtcgccggcgc 401 ||||||||||||||| |||||||| Sbjct: 2297657 ggacctcgtgcgcgtggccggcgc 2297634 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 caccaaggacctcgtgcgcgtcgccggcgccg 403 |||||||||||| ||||||| |||| |||||| Sbjct: 263700 caccaaggacctggtgcgcgacgcccgcgccg 263669
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 122354 tcgccggcgccggcctccgc 122373
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tcgccggcgccggcctccgc 411 |||||||||||||||||||| Sbjct: 59395 tcgccggcgccggcctccgc 59414
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ggacgaggacggcggcgtgg 361 |||||||||||||||||||| Sbjct: 42728 ggacgaggacggcggcgtgg 42747
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 261 cgccaagtaccagctgctgcgcacgctgcggacgcaccacggcg 304 |||||||||||||||| ||| |||| |||| || |||| ||||| Sbjct: 435 cgccaagtaccagctgatgcacacggtgcgcacccaccgcggcg 478
>dbj|AK063700.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G08, full insert sequence Length = 931 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacctcgtgcgcgtcgccgg 398 |||||||||||||||||||| Sbjct: 376 gacctcgtgcgcgtcgccgg 357
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds Length = 1201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcgcgtcgccggcgccggcc 406 |||||||||||||||||||| Sbjct: 604 gcgcgtcgccggcgccggcc 585
>gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, complete cds Length = 1246 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcgcgtcgccggcgccggcc 406 |||||||||||||||||||| Sbjct: 603 gcgcgtcgccggcgccggcc 584
>gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, complete cds Length = 1226 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcgcgtcgccggcgccggcc 406 |||||||||||||||||||| Sbjct: 604 gcgcgtcgccggcgccggcc 585
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 cggcagcgcggcggcgctcatcaccgac 240 ||||||||||||||||| ||||||||| Sbjct: 143050 cggcagcgcggcggcgcctatcaccgac 143077
>gb|BC098936.1| Rattus norvegicus EF hand domain containing 2, mRNA (cDNA clone MGC:114423 IMAGE:7446346), complete cds Length = 2135 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tgcagatggaggacgaggacggcg 355 |||||||||||||||||| ||||| Sbjct: 68 tgcagatggaggacgagggcggcg 91
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggcgcggctgctgcgcgtgcag 108 ||||||||||||||||||| |||| Sbjct: 3484762 gcggcgcggctgctgcgcgcgcag 3484785
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gcggcgcggctgctgcgcgtgcag 108 ||||||||||||||||||| |||| Sbjct: 1464547 gcggcgcggctgctgcgcgagcag 1464570
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgaggacggcggcgtgggcg 364 |||||||||||||||||||| Sbjct: 12146652 cgaggacggcggcgtgggcg 12146671
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gacctcgtgcgcgtcgccgg 398 |||||||||||||||||||| Sbjct: 46886 gacctcgtgcgcgtcgccgg 46867
>ref|NM_001031648.1| Rattus norvegicus EF hand domain containing 2 (Efhd2), mRNA Length = 2135 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 tgcagatggaggacgaggacggcg 355 |||||||||||||||||| ||||| Sbjct: 68 tgcagatggaggacgagggcggcg 91
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159296 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgaggacggcggcgtgggcg 364 |||||||||||||||||||| Sbjct: 105035 cgaggacggcggcgtgggcg 105016
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds Length = 1265 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcgcgtcgccggcgccggcc 406 |||||||||||||||||||| Sbjct: 603 gcgcgtcgccggcgccggcc 584 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,548,586 Number of Sequences: 3902068 Number of extensions: 3548586 Number of successful extensions: 93683 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84937 Number of HSP's gapped (non-prelim): 8741 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
