ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast65a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.1... 30 1.2
2IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1... 30 1.2
3IPMK_HUMAN (Q8NFU5) Inositol polyphosphate multikinase (EC 2.7.1... 30 1.2
4VNUA_PRVKA (P33485) Probable nuclear antigen 28 4.6
5SYFB_DESDG (Q30Y16) Phenylalanyl-tRNA synthetase beta chain (EC ... 28 7.8

>IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 237 GEVAVPDGVDGDAAGEERALVVLHGDGRVLHQRREPPRG 121
           G V +   V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 28  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 66



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>IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 237 GEVAVPDGVDGDAAGEERALVVLHGDGRVLHQRREPPRG 121
           G V +   V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 28  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 66



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>IPMK_HUMAN (Q8NFU5) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 416

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 237 GEVAVPDGVDGDAAGEERALVVLHGDGRVLHQRREPPRG 121
           G V +   V G   G+++  ++ H DG VL Q + PPRG
Sbjct: 45  GCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRG 83



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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 228  AVPDGVDGDAAGEERALVVLHGDGR--VLHQRREPPRG 121
            A  DG+DGD  G     V + GDG       R EPPRG
Sbjct: 1528 AAGDGLDGDGGGGVGVGVGVGGDGAPGAKRPRIEPPRG 1565



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>SYFB_DESDG (Q30Y16) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 800

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 245 CGAEKLPYQTGLTAMRPERSAPLWYFMVMGGSCTSAVSRLVAT 117
           C AE  P+Q      RP R+A L    +  G C   + +L  T
Sbjct: 394 CRAEPAPWQAAQLRFRPARAAALLGISLDDGFCRETLQKLGCT 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,750,097
Number of Sequences: 219361
Number of extensions: 315641
Number of successful extensions: 1120
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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