>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                           
Query: 310     gagctcttgccgttcatccgcgtgtacaagagtggccgcgtcgagcgcctcctcggcacc 369
               |||||| | |||||||||||||| |||  ||| |||||||| |||||||| |||||||||
Sbjct: 5824406 gagctcctcccgttcatccgcgtctacgtgagcggccgcgtggagcgcctgctcggcacc 5824465

                                                                  
Query: 370     gacaccgtgccggcgtccttcgacgcgtccacgggcgtggcgtccaaggac 420
               ||||| ||  |||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 5824466 gacacggtcgcggcgtccctcgacgagcccacgggcgtggcttccaaggac 5824516

>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                          
Query: 310    gagctcttgccgttcatccgcgtgtacaagagtggccgcgtcgagcgcctcctcggcacc 369
              |||||| | |||||||||||||| |||  ||| |||||||| |||||||| |||||||||
Sbjct: 139935 gagctcctcccgttcatccgcgtctacgtgagcggccgcgtggagcgcctgctcggcacc 139994

                                                                 
Query: 370    gacaccgtgccggcgtccttcgacgcgtccacgggcgtggcgtccaaggac 420
              ||||| ||  |||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 139995 gacacggtcgcggcgtccctcgacgagcccacgggcgtggcttccaaggac 140045

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                         
Query: 310   gagctcttgccgttcatccgcgtgtacaagagtggccgcgtcgagcgcctcctcggcacc 369
             |||||| | |||||||||||||| |||  ||| |||||||| |||||||| |||||||||
Sbjct: 25181 gagctcctcccgttcatccgcgtctacgtgagcggccgcgtggagcgcctgctcggcacc 25240

                                                                
Query: 370   gacaccgtgccggcgtccttcgacgcgtccacgggcgtggcgtccaaggac 420
             ||||| ||  |||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 25241 gacacggtcgcggcgtccctcgacgagcccacgggcgtggcttccaaggac 25291

>dbj|AK108107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B08, full
           insert sequence
          Length = 1131

 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 310 gagctcttgccgttcatccgcgtgtacaagagtggccgcgtcgagcgcctcctcggcacc 369
           |||||| | |||||||||||||| |||  ||| |||||||| |||||||| |||||||||
Sbjct: 93  gagctcctcccgttcatccgcgtctacgtgagcggccgcgtggagcgcctgctcggcacc 152

                                                              
Query: 370 gacaccgtgccggcgtccttcgacgcgtccacgggcgtggcgtccaaggac 420
           ||||| ||  |||||||| |||||| | ||||||||||||| |||||||||
Sbjct: 153 gacacggtcgcggcgtccctcgacgagcccacgggcgtggcttccaaggac 203

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 322      ttcatccgcgtgtacaagagtggccgcgtcgagcgcctcct 362
                |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 17417908 ttcatccgcgtgtacaagagcggccgcgtcgagcgcttcct 17417948

>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 322    ttcatccgcgtgtacaagagtggccgcgtcgagcgcctcct 362
              |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 141821 ttcatccgcgtgtacaagagcggccgcgtcgagcgcttcct 141861

>ref|XM_482924.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 334 tacaagagtggccgcgtcgagcgcctcctcggcaccgacaccgtgccggcgtccttcgac 393
           |||||||| |||||||||| |||  || | ||||| |||||||||||||||||  | |||
Sbjct: 112 tacaagagcggccgcgtcgtgcggttcattggcacggacaccgtgccggcgtcgatggac 171

                                      
Query: 394 gcgtccacgggcgtggcgtccaaggac 420
            || |||| |||||||| |||||||||
Sbjct: 172 ccggccaccggcgtggcctccaaggac 198

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                            
Query: 334      tacaagagtggccgcgtcgagcgcctcctcggcaccgacaccgtgccggcgtccttcgac 393
                |||||||| |||||||||| |||  || | ||||| |||||||||||||||||  | |||
Sbjct: 23396767 tacaagagcggccgcgtcgtgcggttcattggcacggacaccgtgccggcgtcgatggac 23396708

                                           
Query: 394      gcgtccacgggcgtggcgtccaaggac 420
                 || |||| |||||||| |||||||||
Sbjct: 23396707 ccggccaccggcgtggcctccaaggac 23396681

>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                         
Query: 334   tacaagagtggccgcgtcgagcgcctcctcggcaccgacaccgtgccggcgtccttcgac 393
             |||||||| |||||||||| |||  || | ||||| |||||||||||||||||  | |||
Sbjct: 78604 tacaagagcggccgcgtcgtgcggttcattggcacggacaccgtgccggcgtcgatggac 78545

                                        
Query: 394   gcgtccacgggcgtggcgtccaaggac 420
              || |||| |||||||| |||||||||
Sbjct: 78544 ccggccaccggcgtggcctccaaggac 78518

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 369     cgacaccgtgccggcgtccttcgacg 394
               |||||||||||||||| |||||||||
Sbjct: 3755640 cgacaccgtgccggcgaccttcgacg 3755615

>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 369    cgacaccgtgccggcgtccttcgacg 394
              |||||||||||||||| |||||||||
Sbjct: 295753 cgacaccgtgccggcgaccttcgacg 295728

>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 369    cgacaccgtgccggcgtccttcgacg 394
              |||||||||||||||| |||||||||
Sbjct: 273942 cgacaccgtgccggcgaccttcgacg 273917

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     caccaacggcaaggcgagggc 99
              |||||||||||||||||||||
Sbjct: 777292 caccaacggcaaggcgagggc 777312

>ref|XM_582866.2| PREDICTED: Bos taurus similar to kinesin family member 7 (LOC538808),
            mRNA
          Length = 5498

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 182  tccgtcccctgcttcttctccttca 206
            |||||| ||||||||||||||||||
Sbjct: 2942 tccgtcgcctgcttcttctccttca 2918

>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 343   ggccgcgtcgagcgcctcctcggcaccga 371
             ||||||||||| ||| |||||||||||||
Sbjct: 88052 ggccgcgtcgaacgcttcctcggcaccga 88024

>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    cctgcttcttctccttcactt 209
              |||||||||||||||||||||
Sbjct: 353154 cctgcttcttctccttcactt 353174

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 344     gccgcgtcgagcgcctcctcg 364
               |||||||||||||||||||||
Sbjct: 3404280 gccgcgtcgagcgcctcctcg 3404260



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 68      cgcacgcacctcaccaacggcaaggcga 95
               ||||||||||||||| ||||| ||||||
Sbjct: 4459368 cgcacgcacctcacccacggcgaggcga 4459395

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 362     tcggcaccgacaccgtgccggcgtc 386
               ||||||||||||||||| |||||||
Sbjct: 5258693 tcggcaccgacaccgtgtcggcgtc 5258717

>ref|XM_321009.2| Anopheles gambiae str. PEST ENSANGP00000019866
           (ENSANGG00000017377), partial mRNA
          Length = 2289

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 108 tcgccccaccccgctcgacgc 128
           |||||||||||||||||||||
Sbjct: 938 tcgccccaccccgctcgacgc 958

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 50      gtgtccggcgcgcggccgcg 69
               ||||||||||||||||||||
Sbjct: 1284998 gtgtccggcgcgcggccgcg 1284979

>emb|AL672114.1|MLO672114 Mesorhizobium loti R7A symbiosis island; segment 3/4
          Length = 149050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gtccggcgcgcggccgcgca 71
             ||||||||||||||||||||
Sbjct: 40970 gtccggcgcgcggccgcgca 40951

>gb|AE012116.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 24 of
             460 of the complete genome
          Length = 13074

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acgtgcagtgtgcgcgcagc 20
             ||||||||||||||||||||
Sbjct: 11261 acgtgcagtgtgcgcgcagc 11242

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      acgtgcagtgtgcgcgcagc 20
              ||||||||||||||||||||
Sbjct: 265522 acgtgcagtgtgcgcgcagc 265503

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     cgcccgccgccggaatggct 279
               ||||||||||||||||||||
Sbjct: 2516165 cgcccgccgccggaatggct 2516146

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 347     gcgtcgagcgcctcctcggc 366
               ||||||||||||||||||||
Sbjct: 5091946 gcgtcgagcgcctcctcggc 5091965

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      cgcggccgcgcacgcacctc 79
               ||||||||||||||||||||
Sbjct: 7967309 cgcggccgcgcacgcacctc 7967328

>gb|AY785778.1| Crithidia oncopelti paraflagellar rod protein (PFR1) mRNA, partial
           cds
          Length = 927

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gccgcgtcgagcgcctcctc 363
           ||||||||||||||||||||
Sbjct: 701 gccgcgtcgagcgcctcctc 682

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gcgtcgagcgcctcctcggc 366
              ||||||||||||||||||||
Sbjct: 578045 gcgtcgagcgcctcctcggc 578026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,656,333
Number of Sequences: 3902068
Number of extensions: 2656333
Number of successful extensions: 60297
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58358
Number of HSP's gapped (non-prelim): 1939
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)