| Clone Name | bast65a04 |
|---|---|
| Clone Library Name | barley_pub |
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +3 Query: 252 YKDPKQPLGVRIKDLLGRMTLAEKIGQM 335 Y+D + P R DL+ RMTLAEK G M Sbjct: 58 YEDWRLPAAERAADLVSRMTLAEKAGVM 85
>PURA_THET8 (Q5SLS1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 408 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +3 Query: 252 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEA 371 Y D + +G+R DLL TL E++ ++ E+ N+T EA Sbjct: 129 YSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167
>PURA_THET2 (Q72GT4) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 408 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +3 Query: 252 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEA 371 Y D + +G+R DLL TL E++ ++ E+ N+T EA Sbjct: 129 YSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167
>PURA_BACSU (P29726) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 430 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 252 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEAM 374 Y D +G+RI DLL R AEK+ + +E +N E M Sbjct: 136 YMDKAARIGIRIADLLDRDAFAEKLER--NLEEKNRLLEKM 174
>Y2144_AQUAE (O67900) Hypothetical protein aq_2144| Length = 298 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 297 LGRMTLAEKIGQMTQIERENATAEAMSKYFI 389 LG+ L E I M IE+EN E++ YFI Sbjct: 102 LGKKELQEAIDTMINIEKENLKEESIYDYFI 132
>ZN121_HUMAN (P58317) Zinc finger protein 121 (Zinc finger protein 20)| (Fragment) Length = 295 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 185 EAPHLGTVSGTDHHRLYI*TSQFTTVTDGRPGEAAACG 72 E P+ G ++R Y+ T F T T+ +P E CG Sbjct: 130 EKPYECNECGKAYNRFYLLTEHFKTHTEEKPFECKVCG 167
>JAD1C_CRIGR (P41228) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) (Fragment) Length = 180 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 163 TVPRWGASTRPPLFSS-CSAWWRWEARINSSTRIRS 267 TVPR +S RP SS AWW W+ + +RS Sbjct: 10 TVPRLLSSQRPGFTSSPLLAWWEWDTKFLCPLCMRS 45
>DUSC_AZOVI (P96192) tRNA-dihydrouridine synthase C (EC 1.-.-.-)| Length = 309 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = +1 Query: 136 YSRW*SVPDTVPRWGASTRPPLFSSCSAWWRWEARINSSTR 258 YSRW + P G+ PL S S W W A I R Sbjct: 250 YSRWCASSGGAPGSGSRRATPLAGSSSGWACWRAVIRRRPR 290 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,772,133 Number of Sequences: 219361 Number of extensions: 1264562 Number of successful extensions: 3863 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3863 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)