| Clone Name | bast65a04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA, complete cds Length = 2105 Score = 603 bits (304), Expect = e-169 Identities = 319/324 (98%) Strand = Plus / Plus Query: 149 gatcggtaccagacacagtgccaagatggggagcttccacaagaccacctttgttctcct 208 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1 gatcggtaccagacacagtgccaagatggggaacttgcacaagaccacctttgttctcct 60 Query: 209 catgttctgcttggtggcgttgggaagcgcggattaactcaagtacaaggatccgaagca 268 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 catgttctgcttggcggcgttgggaagcgcggattatctcaagtacaaggatccgaagca 120 Query: 269 gcctcttggcgttcgcatcaaggatctgcttggtcggatgactctcgctgaaaagatagg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcctcttggcgttcgcatcaaggatctgcttggtcggatgactctcgctgaaaagatagg 180 Query: 329 ccagatgacccagattgagagggagaatgccacggcagaggccatgtccaagtacttcat 388 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccagatgacccagatcgagagggagaatgccacggcagaggccatgtccaagtacttcat 240 Query: 389 aggtagcgtactgagtggtggaggcagtgtgccttctcctcaagcatccgctgcggcttg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aggtagcgtactgagtggtggaggcagtgtgccttctcctcaagcatccgctgcggcttg 300 Query: 449 gcagtcgatggtgaatgaaatgca 472 |||||||||||||||||||||||| Sbjct: 301 gcagtcgatggtgaatgaaatgca 324
>gb|AY586531.1| Secale cereale cell wall beta-glucosidase mRNA, complete cds Length = 2215 Score = 513 bits (259), Expect = e-142 Identities = 325/347 (93%) Strand = Plus / Plus Query: 126 ggtctatatatacagtcggtggtgatcggtaccagacacagtgccaagatggggagcttc 185 |||||||| ||| | ||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 135 ggtctatacatatactcggtggtgatcgacaccagacagagtgccaagatggggagtttg 194 Query: 186 cacaagaccacctttgttctcctcatgttctgcttggtggcgttgggaagcgcggattaa 245 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 195 cacaagaccacctttgttctcctcatgttctgcttggcggcgttgggaagcgcggatcat 254 Query: 246 ctcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgg 305 ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| Sbjct: 255 ctcaagtacaaggatccgaagcagcctattggtgtccgcatcaaggatctgcttggtcgg 314 Query: 306 atgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggca 365 |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 315 atgactctggctgaaaagattggccagatgacccagattgagagagagaatgccacagca 374 Query: 366 gaggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttct 425 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 375 gaggccatgtccaagtacttcataggtagcgtactcagtggtggaggcagcgtgccttct 434 Query: 426 cctcaagcatccgctgcggcttggcagtcgatggtgaatgaaatgca 472 ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 435 cctcaagcatccgctgcagcttggcagtcgatggtgaatgagatgca 481
>gb|AY091513.1| Triticum aestivum beta-D-glucan exohydrolase mRNA, complete cds Length = 2116 Score = 505 bits (255), Expect = e-140 Identities = 279/287 (97%) Strand = Plus / Plus Query: 186 cacaagaccacctttgttctcctcatgttctgcttggtggcgttgggaagcgcggattaa 245 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13 cacaagaccacctttgttctcctcatgttctgcttggcggcgttgggaagcgcggattat 72 Query: 246 ctcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ctcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgg 132 Query: 306 atgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggca 365 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 133 atgaccctcgctgaaaagatcggccagatgacccagattgagagggagaatgccacagca 192 Query: 366 gaggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gaggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttct 252 Query: 426 cctcaagcatccgctgcggcttggcagtcgatggtgaatgaaatgca 472 ||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 253 cctcaggcatccgctgcggcttggcagtcgatggtgaacgagatgca 299
>ref|XM_469751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2156 Score = 202 bits (102), Expect = 7e-49 Identities = 195/226 (86%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 352 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 411 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 412 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 471 Query: 367 aggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttctc 426 || || ||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 472 agcagattgccaagtacttcataggtagtgtactgagtggtggaggcagtgtgcctgctc 531 Query: 427 ctcaagcatccgctgcggcttggcagtcgatggtgaatgaaatgca 472 |||| ||||| ||| ||||||| || ||||||||||||||||| Sbjct: 532 ctcaggcatcagctcaggcttgggcttcaatggtgaatgaaatgca 577
>dbj|AK122100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125I15, full insert sequence Length = 2144 Score = 202 bits (102), Expect = 7e-49 Identities = 195/226 (86%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 92 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 151 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 152 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 211 Query: 367 aggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttctc 426 || || ||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 212 agcagattgccaagtacttcataggtagtgtactgagtggtggaggcagtgtgcctgctc 271 Query: 427 ctcaagcatccgctgcggcttggcagtcgatggtgaatgaaatgca 472 |||| ||||| ||| ||||||| || ||||||||||||||||| Sbjct: 272 ctcaggcatcagctcaggcttgggcttcaatggtgaatgaaatgca 317
>dbj|AK065044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H22, full insert sequence Length = 3093 Score = 202 bits (102), Expect = 7e-49 Identities = 195/226 (86%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 1042 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 1101 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 1102 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 1161 Query: 367 aggccatgtccaagtacttcataggtagcgtactgagtggtggaggcagtgtgccttctc 426 || || ||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1162 agcagattgccaagtacttcataggtagtgtactgagtggtggaggcagtgtgcctgctc 1221 Query: 427 ctcaagcatccgctgcggcttggcagtcgatggtgaatgaaatgca 472 |||| ||||| ||| ||||||| || ||||||||||||||||| Sbjct: 1222 ctcaggcatcagctcaggcttgggcttcaatggtgaatgaaatgca 1267
>gb|AY103742.1| Zea mays PCO090119 mRNA sequence Length = 2612 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 207 ctcatgttctgcttggtggcgttgggaagcgcggattaactcaagtacaaggatccgaag 266 |||||||||||| || | ||| |||| || ||||| || |||||||||||||| || ||| Sbjct: 417 ctcatgttctgcctgctagcgctggggagagcggagtacctcaagtacaaggacccaaag 476 Query: 267 cagcctcttggcgttcgcatcaaggatctgcttggtcggatgactctcgctgaaaagata 326 ||||| | | |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 477 cagcccgtcgctgttcgcatcaaggacctgctgggtcggatgactctcgccgaaaagatc 536 Query: 327 ggccagatgacccagattgagagggagaatgccacggcagaggccatgtccaagtacttc 386 ||||||||||| ||||| |||||||| || |||||||| || || || |||| |||||| Sbjct: 537 ggccagatgacgcagatcgagagggaaaacgccacggccgacgcgctggccaaatacttc 596 Query: 387 ataggtagcgtactgagtggtggaggcagtgtgccttctcctca 430 ||||||||||| ||||| || |||||||| |||||| ||||||| Sbjct: 597 ataggtagcgtgctgagcggcggaggcagcgtgcctgctcctca 640
>gb|AF225411.1|AF225411 Zea mays exoglucanase precursor (exg1) gene, complete cds Length = 4193 Score = 147 bits (74), Expect = 4e-32 Identities = 158/186 (84%) Strand = Plus / Plus Query: 207 ctcatgttctgcttggtggcgttgggaagcgcggattaactcaagtacaaggatccgaag 266 |||||||||||| || | ||| |||| || ||||| || |||||||||||||| |||||| Sbjct: 716 ctcatgttctgcctgctagcgctggggagagcggagtacctcaagtacaaggacccgaag 775 Query: 267 cagcctcttggcgttcgcatcaaggatctgcttggtcggatgactctcgctgaaaagata 326 ||||| | | |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 776 cagcccgtcgctgttcgcatcaaggacctgctgggtcggatgactctcgccgaaaagatc 835 Query: 327 ggccagatgacccagattgagagggagaatgccacggcagaggccatgtccaagtacttc 386 ||||||||||| ||||| |||||||| || |||||||| || || || |||| |||||| Sbjct: 836 ggccagatgacgcagatcgagagggaaaacgccacggccgacgcgctggccaaatacttc 895 Query: 387 ataggt 392 |||||| Sbjct: 896 ataggt 901
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 30561618 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 30561677 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 30561678 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 30561737 Query: 367 aggccatgtccaagtacttcataggt 392 || || ||||||||||||||||| Sbjct: 30561738 agcagattgccaagtacttcataggt 30561763 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 389 aggtagcgtactgagtggtggaggcagtgtgccttctcctcaagcatccgctgcggcttg 448 |||||| ||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 30561857 aggtagtgtactgagtggtggaggcagtgtgcctgctcctcaggcatcagctcaggcttg 30561916 Query: 449 gcagtcgatggtgaatgaaatgca 472 | || ||||||||||||||||| Sbjct: 30561917 ggcttcaatggtgaatgaaatgca 30561940 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 303 cggatgactctcgctgaaaagataggccagatgacccagat 343 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 30592877 cggatgacgctcgcggagaagatcggccagatgacgcagat 30592917 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcccgccgcacgccgccgc 86 |||||||||||||||||||| Sbjct: 33508619 ctcccgccgcacgccgccgc 33508600
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 93191 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 93250 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 93251 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 93310 Query: 367 aggccatgtccaagtacttcataggt 392 || || ||||||||||||||||| Sbjct: 93311 agcagattgccaagtacttcataggt 93336 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 389 aggtagcgtactgagtggtggaggcagtgtgccttctcctcaagcatccgctgcggcttg 448 |||||| ||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 93430 aggtagtgtactgagtggtggaggcagtgtgcctgctcctcaggcatcagctcaggcttg 93489 Query: 449 gcagtcgatggtgaatgaaatgca 472 | || ||||||||||||||||| Sbjct: 93490 ggcttcaatggtgaatgaaatgca 93513 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 303 cggatgactctcgctgaaaagataggccagatgacccagat 343 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 124450 cggatgacgctcgcggagaagatcggccagatgacgcagat 124490
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 6e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 247 tcaagtacaaggatccgaagcagcctcttggcgttcgcatcaaggatctgcttggtcgga 306 ||||||| ||||||||||||||||| | ||||| ||||||||||||| || |||| Sbjct: 30653040 tcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccgga 30653099 Query: 307 tgactctcgctgaaaagataggccagatgacccagattgagagggagaatgccacggcag 366 ||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| | Sbjct: 30653100 tgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcgg 30653159 Query: 367 aggccatgtccaagtacttcataggt 392 || || ||||||||||||||||| Sbjct: 30653160 agcagattgccaagtacttcataggt 30653185 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 389 aggtagcgtactgagtggtggaggcagtgtgccttctcctcaagcatccgctgcggcttg 448 |||||| ||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 30653279 aggtagtgtactgagtggtggaggcagtgtgcctgctcctcaggcatcagctcaggcttg 30653338 Query: 449 gcagtcgatggtgaatgaaatgca 472 | || ||||||||||||||||| Sbjct: 30653339 ggcttcaatggtgaatgaaatgca 30653362 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 303 cggatgactctcgctgaaaagataggccagatgacccagat 343 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 30684299 cggatgacgctcgcggagaagatcggccagatgacgcagat 30684339 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcccgccgcacgccgccgc 86 |||||||||||||||||||| Sbjct: 33599091 ctcccgccgcacgccgccgc 33599072
>gb|AY357946.1| Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds Length = 2134 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 tacttcataggtagcgtactgagtggtggaggcagtgtgcc 421 |||||||||||||| || ||||||||||||| |||||||| Sbjct: 294 tacttcataggtagtttattgagtggtggaggtagtgtgcc 334
>ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT3G47050 mRNA, complete cds Length = 1928 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 302 tcggatgactctcgctgaaaagataggccagatgac 337 |||||||||||| |||||||| || ||||||||||| Sbjct: 110 tcggatgactctggctgaaaaaatcggccagatgac 145
>gb|AY335818.1| Gossypium hirsutum beta-D-glucosidase mRNA, complete cds Length = 2071 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 304 ggatgactctcgctgaaaagataggccagatgacccagattgag 347 |||||||| | ||||||||||| ||||| ||||| ||||||||| Sbjct: 235 ggatgactttggctgaaaagattggccaaatgactcagattgag 278 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 381 tacttcataggtagcgtactgagtggtggaggcagtgtgcc 421 |||||||| || || || |||||||||||||| |||||||| Sbjct: 312 tacttcattgggagtgttctgagtggtggagggagtgtgcc 352
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12 Length = 140680 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 302 tcggatgactctcgctgaaaagataggccagatgac 337 |||||||||||| |||||||| || ||||||||||| Sbjct: 48208 tcggatgactctggctgaaaaaatcggccagatgac 48173
>ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 65 gcctcccgccgcacgccgccgcc 87 ||||||||||||||||||||||| Sbjct: 1289 gcctcccgccgcacgccgccgcc 1267
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 gcctcccgccgcacgccgccgcc 87 ||||||||||||||||||||||| Sbjct: 72 gcctcccgccgcacgccgccgcc 94
>ref|NM_191428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 381 tacttcataggtagcgtactgagtggtggaggcagtgtgccttctcc 427 |||||||||||||| ||| |||||||||| || ||||| ||| |||| Sbjct: 211 tacttcataggtagtgtattgagtggtggtggaagtgtccctgctcc 257
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 65 gcctcccgccgcacgccgccgcc 87 ||||||||||||||||||||||| Sbjct: 22236051 gcctcccgccgcacgccgccgcc 22236029 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccg 85 |||||||||||||||||||| Sbjct: 7934264 cctcccgccgcacgccgccg 7934283
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 65 gcctcccgccgcacgccgccgcc 87 ||||||||||||||||||||||| Sbjct: 131895 gcctcccgccgcacgccgccgcc 131873
>dbj|AK066300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060A09, full insert sequence Length = 2670 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 381 tacttcataggtagcgtactgagtggtggaggcagtgtgccttctcc 427 |||||||||||||| ||| |||||||||| || ||||| ||| |||| Sbjct: 544 tacttcataggtagtgtattgagtggtggtggaagtgtccctgctcc 590
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full insert sequence Length = 1505 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 gcctcccgccgcacgccgccgcc 87 ||||||||||||||||||||||| Sbjct: 72 gcctcccgccgcacgccgccgcc 94
>gb|BT013550.1| Lycopersicon esculentum clone 132277F, mRNA sequence Length = 2049 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 324 ataggccagatgacccagattgagag 349 ||||| |||||||||||||||||||| Sbjct: 215 ataggtcagatgacccagattgagag 240 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 381 tacttcataggtagcgtactgagtggtggaggcagtg 417 |||||||| || || ||||||||||||||||| |||| Sbjct: 272 tacttcattgggagtgtactgagtggtggaggaagtg 308
>gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, complete sequence Length = 138416 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 cttggtggcgttgggaagcgcg 239 |||||||||||||||||||||| Sbjct: 8176 cttggtggcgttgggaagcgcg 8155
>gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, complete sequence Length = 160348 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 cttggtggcgttgggaagcgcg 239 |||||||||||||||||||||| Sbjct: 58905 cttggtggcgttgggaagcgcg 58926
>ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2192 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 303 cggatgactctcgctgaaaagataggccagatgacccagat 343 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 286 cggatgacgctcgcggagaagatcggccagatgacgcagat 326
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gccgcacgccgccgcctcgcc 92 ||||||||||||||||||||| Sbjct: 101027 gccgcacgccgccgcctcgcc 101047
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gccgcacgccgccgcctcgcc 92 ||||||||||||||||||||| Sbjct: 99867 gccgcacgccgccgcctcgcc 99887
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 25819 cctcccgccgcac-ccgccgcctcgcccg 25846
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 152387 cctcccgccgcac-ccgccgcctcgcccg 152414
>gb|AC093178.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0091B12, complete sequence Length = 137568 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 38259 cctcccgccgcac-ccgccgcctcgcccg 38232 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6093 cctcccgccgcac-ccgccgcctcgcccg 6066
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 3247948 cctcccgccgcac-ccgccgcctcgcccg 3247975 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 2300500 cctcccgccgcac-ccgccgcctcgcccg 2300527
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6089986 cctcccgccgcac-ccgccgcctcgcccg 6089959 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cccgccgcacgccgccgcctcgcc 92 |||||||||| ||||||||||||| Sbjct: 22638602 cccgccgcactccgccgcctcgcc 22638625
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 8966660 cctcccgccgcac-ccgccgcctcgcccg 8966687 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6835232 cctcccgccgcac-ccgccgcctcgcccg 6835205 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6803066 cctcccgccgcac-ccgccgcctcgcccg 6803039 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgccc 93 ||||||||||| |||||||||||||||| Sbjct: 17359688 cctcccgccgc-cgccgccgcctcgccc 17359714
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gccgcacgccgccgcctcgcc 92 ||||||||||||||||||||| Sbjct: 5414353 gccgcacgccgccgcctcgcc 5414373 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gccgccgcctcgcccggccg 98 |||||||||||||||||||| Sbjct: 15583802 gccgccgcctcgcccggccg 15583821
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 54883 cctcccgccgcac-ccgccgcctcgcccg 54910
>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full insert sequence Length = 2424 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 303 cggatgactctcgctgaaaagataggccagatgacccagat 343 |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 499 cggatgacgctcgcggagaagatcggccagatgacgcagat 539
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 8971799 cctcccgccgcac-ccgccgcctcgcccg 8971826 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6838518 cctcccgccgcac-ccgccgcctcgcccg 6838491 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6806352 cctcccgccgcac-ccgccgcctcgcccg 6806325 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgccc 93 ||||||||||| |||||||||||||||| Sbjct: 17368728 cctcccgccgc-cgccgccgcctcgccc 17368754
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 6089888 cctcccgccgcac-ccgccgcctcgcccg 6089861 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cccgccgcacgccgccgcctcgcc 92 |||||||||| ||||||||||||| Sbjct: 22566793 cccgccgcactccgccgcctcgcc 22566816
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 125507 cctcccgccgcac-ccgccgcctcgcccg 125534
>emb|AL928778.4|CNS08CC8 Oryza sativa chromosome 12, . BAC OSJNBb0074J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125153 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccgcctcgcccg 94 ||||||||||||| ||||||||||||||| Sbjct: 15360 cctcccgccgcac-ccgccgcctcgcccg 15387
>ref|XM_549885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 282 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 172 cgccgccgcctcgcccggcc 153
>ref|XM_493785.1| Oryza sativa (japonica cultivar-group), Ozsa8504 predicted mRNA Length = 1314 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccg 94 ||||||||||||||||| |||||| Sbjct: 308 cgccgcacgccgccgccgcgcccg 331
>ref|XM_483762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 143 tcccgccgcacgccgccgcc 124
>ref|XM_507334.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.11 mRNA Length = 561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 189 tcccgccgcacgccgccgcc 170
>ref|XM_480961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 225 Score = 40.1 bits (20), Expect = 6.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccg 102 |||||| ||||||||||||| ||||||||||| Sbjct: 202 cgccgcgcgccgccgcctcg-ccggccggccg 172
>ref|XM_477868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 192 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gccgcacgccgccgcctcgc 91 |||||||||||||||||||| Sbjct: 22 gccgcacgccgccgcctcgc 3
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccggccgtccgtcaccgtgg 115 |||||||||||||||||||| Sbjct: 175546 ccggccgtccgtcaccgtgg 175527
>gb|AC125021.12| Mus musculus chromosome 1, clone RP24-212P5, complete sequence Length = 174626 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 40610 cgccgccgcctcgcccggcc 40591
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccggccg 98 ||||||||||||||||| ||||| |||| Sbjct: 58449 cgccgcacgccgccgccgcgccccgccg 58476
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccggccg 98 ||||||||||||||||| ||||| |||| Sbjct: 144768 cgccgcacgccgccgccgcgccccgccg 144795
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctcccgccgcacgccgccgc 86 |||||||||||||||||||| Sbjct: 156461 ctcccgccgcacgccgccgc 156480
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gccgccgcctcgcccggccg 98 |||||||||||||||||||| Sbjct: 50388 gccgccgcctcgcccggccg 50407
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 tgccaagatggggagcttccacaagacc 194 ||||||||||| ||||||| |||||||| Sbjct: 107580 tgccaagatggagagcttctacaagacc 107553
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 acctttgttctcctcatgtt 214 |||||||||||||||||||| Sbjct: 172503 acctttgttctcctcatgtt 172522
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcccgccgcacgccgccgc 86 |||||||||||||||||||| Sbjct: 37808 ctcccgccgcacgccgccgc 37789
>ref|XM_898204.2| PREDICTED: Mus musculus nitric oxide synthase 1 (neuronal) adaptor protein, transcript variant 2 (Nos1ap), mRNA Length = 1607 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 378 cgccgccgcctcgcccggcc 397
>gb|AC121836.2| Mus musculus BAC clone RP24-73L11 from 8, complete sequence Length = 195192 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 acctttgttctcctcatgtt 214 |||||||||||||||||||| Sbjct: 74590 acctttgttctcctcatgtt 74609
>ref|XM_773574.1| Giardia lamblia ATCC 50803 hypothetical protein (dnaJ) partial mRNA Length = 1230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctcaagtacaaggatccgaa 265 |||||||||||||||||||| Sbjct: 1102 ctcaagtacaaggatccgaa 1121
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 66 cctcccgccgcacgccgccgcctcgccc 93 ||||||||||| |||||||||||||||| Sbjct: 12591 cctcccgccgc-cgccgccgcctcgccc 12565
>emb|BX322538.9| Zebrafish DNA sequence from clone CH211-245G11 in linkage group 15, complete sequence Length = 159879 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ccacaagaccacctttgttc 204 |||||||||||||||||||| Sbjct: 87632 ccacaagaccacctttgttc 87613
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 1501675 cgccgccgcctcgcccggcc 1501656
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gagggagaatgccacggcag 366 |||||||||||||||||||| Sbjct: 659588 gagggagaatgccacggcag 659607
>dbj|AK045124.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130038C01 product:RIKEN cDNA 6330408P19 gene, full insert sequence Length = 3126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 332 cgccgccgcctcgcccggcc 351
>dbj|AK018149.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330408P19 product:weakly similar to CARBOXYL-TERMINAL PDZ LIGAND OF NEURONAL NITRIC OXIDE SYNTHASE [Rattus norvegicus], full insert sequence Length = 1605 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 378 cgccgccgcctcgcccggcc 397
>dbj|AK053892.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318M18 product:RIKEN cDNA 6330408P19 gene, full insert sequence Length = 3393 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 379 cgccgccgcctcgcccggcc 398
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccggccg 98 ||||||||||||||||| ||||| |||| Sbjct: 17550754 cgccgcacgccgccgccgcgccccgccg 17550781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gccgccgcctcgcccggccg 98 |||||||||||||||||||| Sbjct: 15306758 gccgccgcctcgcccggccg 15306777
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ccggccggccgtccgtcacc 111 |||||||||||||||||||| Sbjct: 21119065 ccggccggccgtccgtcacc 21119046
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 27959142 tcccgccgcacgccgccgcc 27959123 Score = 40.1 bits (20), Expect = 6.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccg 102 |||||| ||||||||||||| ||||||||||| Sbjct: 8914712 cgccgcgcgccgccgcctcg-ccggccggccg 8914682
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 ccgccgcacgccgccgcctcgcccggcc 97 |||||| ||||||||||||||| ||||| Sbjct: 29295521 ccgccgtacgccgccgcctcgcgcggcc 29295494 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgcacgccgccgcctcgc 91 |||||||||||||||||||| Sbjct: 14957538 gccgcacgccgccgcctcgc 14957557
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccgtccg 106 |||||| ||||||||||||| |||||||||| |||| Sbjct: 26636277 cgccgcgcgccgccgcctcg-ccggccggccctccg 26636243 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccg 94 ||||||||||||||||| |||||| Sbjct: 9512190 cgccgcacgccgccgccgcgcccg 9512213 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 685320 cgccgccgcctcgcccggcc 685301
>dbj|AP005882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0069D16 Length = 14774 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ccggccggccgtccgtcacc 111 |||||||||||||||||||| Sbjct: 2219 ccggccggccgtccgtcacc 2200
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccg 94 ||||||||||||||||| |||||| Sbjct: 45619 cgccgcacgccgccgccgcgcccg 45642
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 ccgccgcacgccgccgcctcgcccggcc 97 |||||| ||||||||||||||| ||||| Sbjct: 84210 ccgccgtacgccgccgcctcgcgcggcc 84183
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 36634 tcccgccgcacgccgccgcc 36615
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 40.1 bits (20), Expect = 6.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccg 102 |||||| ||||||||||||| ||||||||||| Sbjct: 16374 cgccgcgcgccgccgcctcg-ccggccggccg 16344
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 6.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccg 102 |||||| ||||||||||||| ||||||||||| Sbjct: 98355 cgccgcgcgccgccgcctcg-ccggccggccg 98325
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 40.1 bits (20), Expect = 6.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 71 cgccgcacgccgccgcctcgcccggccggccgtccg 106 |||||| ||||||||||||| |||||||||| |||| Sbjct: 109991 cgccgcgcgccgccgcctcg-ccggccggccctccg 109957
>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10, complete sequence Length = 187807 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctcatgttctgcttggtggc 226 |||||||||||||||||||| Sbjct: 31199 ctcatgttctgcttggtggc 31218
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggcc 97 |||||||||||||||||||| Sbjct: 69064 cgccgccgcctcgcccggcc 69045
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgcacgccgccgcctcgc 91 |||||||||||||||||||| Sbjct: 97708 gccgcacgccgccgcctcgc 97727
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctcccgccgcacgccgccg 85 |||||||||||||||||||| Sbjct: 57679 cctcccgccgcacgccgccg 57698
>dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 143 tcccgccgcacgccgccgcc 124
>gb|AY112489.1| Zea mays CL31817_1 mRNA sequence Length = 600 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 aggccatgtccaagtacttc 386 |||||||||||||||||||| Sbjct: 310 aggccatgtccaagtacttc 291
>dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 189 tcccgccgcacgccgccgcc 170
>gb|AF128225.1|AF128225 Giardia intestinalis DnaJ homolog gene, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctcaagtacaaggatccgaa 265 |||||||||||||||||||| Sbjct: 1102 ctcaagtacaaggatccgaa 1121
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ccggccggccgtccgtcacc 111 |||||||||||||||||||| Sbjct: 140365 ccggccggccgtccgtcacc 140346
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gccgccgcctcgcccggccg 98 |||||||||||||||||||| Sbjct: 115407 gccgccgcctcgcccggccg 115426
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 71 cgccgcacgccgccgcctcgcccggccg 98 ||||||||||||||||| ||||| |||| Sbjct: 17644462 cgccgcacgccgccgccgcgccccgccg 17644489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gccgccgcctcgcccggccg 98 |||||||||||||||||||| Sbjct: 15389695 gccgccgcctcgcccggccg 15389714
>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138368 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cccgccgcacgccgccgcctcgcc 92 |||||||||| ||||||||||||| Sbjct: 83722 cccgccgcactccgccgcctcgcc 83745
>gb|U14664.1|CHU14664 Cercopithecine herpesvirus 1 gB glycoprotein (UL27) gene, complete cds, and (UL28) gene, partial cds Length = 3177 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cgccgccgcctcgcccggccggcc 101 ||||||||| |||||||||||||| Sbjct: 1672 cgccgccgcgtcgcccggccggcc 1649
>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164480 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctgaaaagataggccagatg 335 |||||||||||||||||||| Sbjct: 79185 ctgaaaagataggccagatg 79166
>dbj|AB029059.1| Oryza sativa (japonica cultivar-group) OsIF1-1 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 498 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 tcccgccgcacgccgccgcc 87 |||||||||||||||||||| Sbjct: 101 tcccgccgcacgccgccgcc 82 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,382,739 Number of Sequences: 3902068 Number of extensions: 3382739 Number of successful extensions: 67043 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 65477 Number of HSP's gapped (non-prelim): 1678 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)