ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast65a02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189435.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 98 tggatctggacggcggcgccgtggcgccgctcaccatctgcatgatcggcgccggcggct 157 |||||||||||||| | || | ||||| ||||||||||||||||||||||||||||||| Sbjct: 47 tggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggct 106 Query: 158 tcatcggctcccacctctgcgagaagctcatggccgagacccagcacgtcgtcctcgccg 217 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 107 tcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccg 166 Query: 218 tcgacgtccactccgacaagatccgccacctcgtcgacccgccgccgccccacctcgccg 277 |||||||| ||| ||||||||||||||||||||||||||| | || ||||||||| | Sbjct: 167 tcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatg 226 Query: 278 ggcgcatctccttccaccgcctcaacatcaagaacgacccccgcctcgagggcctcgtca 337 | |||||||||||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 227 gccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatca 286 Query: 338 agatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaacacgc 397 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 287 agatggccgatctgacgatcaacctggcggcgatctgcacgccggccgactacaacacgc 346 Query: 398 ggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtactgct 457 | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 347 gccccctcgacaccatctacagcaacttcatcgacgcgctccctgtggtcaagtactgct 406 Query: 458 cggaga 463 | |||| Sbjct: 407 ctgaga 412
>dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063F13, full insert sequence Length = 1823 Score = 480 bits (242), Expect = e-132 Identities = 335/366 (91%) Strand = Plus / Plus Query: 98 tggatctggacggcggcgccgtggcgccgctcaccatctgcatgatcggcgccggcggct 157 |||||||||||||| | || | ||||| ||||||||||||||||||||||||||||||| Sbjct: 215 tggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggct 274 Query: 158 tcatcggctcccacctctgcgagaagctcatggccgagacccagcacgtcgtcctcgccg 217 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 275 tcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccg 334 Query: 218 tcgacgtccactccgacaagatccgccacctcgtcgacccgccgccgccccacctcgccg 277 |||||||| ||| ||||||||||||||||||||||||||| | || ||||||||| | Sbjct: 335 tcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatg 394 Query: 278 ggcgcatctccttccaccgcctcaacatcaagaacgacccccgcctcgagggcctcgtca 337 | |||||||||||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 395 gccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatca 454 Query: 338 agatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaacacgc 397 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 455 agatggccgatctgacgatcaacctggcggcgatctgcacgccggccgactacaacacgc 514 Query: 398 ggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtactgct 457 | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 515 gccccctcgacaccatctacagcaacttcatcgacgcgctccctgtggtcaagtactgct 574 Query: 458 cggaga 463 | |||| Sbjct: 575 ctgaga 580
>gb|BT016798.1| Zea mays clone Contig631 mRNA sequence Length = 1534 Score = 408 bits (206), Expect = e-111 Identities = 315/350 (90%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 127 ctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctc 186 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagcta 135 Query: 187 atggccgagacccagcacgtcgtcctcgccgtcgacgtccactccgacaagatccgccac 246 ||||||||||| || ||| ||||||||| || |||||| ||| |||||||||||||||| Sbjct: 136 atggccgagacgcaccacaccgtcctcgctgttgacgtctactgcgacaagatccgccac 195 Query: 247 ctcgtcgacccgccgccgccccacctcgccgggcgcatctccttccaccgcctcaacatc 306 || |||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 196 cttgtcgaccccgcgccgccgcacctcgccgggcgcatctcattccaccgccttaacata 255 Query: 307 aagaacgacccccgcctcgagggcctcgtcaagatggccgatctgacgataaacctggcg 366 || |||||| || | || ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 256 aaaaacgactccaggctagaggggctcatcaagatggccgatctgaccataaacctggcc 315 Query: 367 gcgatctgcacgccggcggactacaacacgcggccgctcgacaccatctacagcaacttc 426 ||||||||||||||||| ||||||||||| || || || ||||||||||||||||||||| Sbjct: 316 gcgatctgcacgccggccgactacaacactcgcccacttgacaccatctacagcaacttc 375 Query: 427 atcgacgcgctcccggtggtcaagtactgctcggag-acggcaagcgtct 475 |||||||| ||||| ||||||||||||||||| ||| || |||||||||| Sbjct: 376 atcgacgcactcccagtggtcaagtactgctccgagaacagcaagcgtct 425
>gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, complete cds Length = 1505 Score = 408 bits (206), Expect = e-111 Identities = 315/350 (90%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 127 ctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctc 186 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 ctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagcta 251 Query: 187 atggccgagacccagcacgtcgtcctcgccgtcgacgtccactccgacaagatccgccac 246 ||||||||||| || ||| ||||||||| || |||||| ||| |||||||||||||||| Sbjct: 252 atggccgagacgcaccacaccgtcctcgctgttgacgtctactgcgacaagatccgccac 311 Query: 247 ctcgtcgacccgccgccgccccacctcgccgggcgcatctccttccaccgcctcaacatc 306 || |||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 312 cttgtcgaccccgcgccgccgcacctcgccgggcgcatctcattccaccgccttaacata 371 Query: 307 aagaacgacccccgcctcgagggcctcgtcaagatggccgatctgacgataaacctggcg 366 || |||||| || | || ||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 372 aaaaacgactccaggctagaggggctcatcaagatggccgatctgaccataaacctggcc 431 Query: 367 gcgatctgcacgccggcggactacaacacgcggccgctcgacaccatctacagcaacttc 426 ||||||||||||||||| ||||||||||| || || || ||||||||||||||||||||| Sbjct: 432 gcgatctgcacgccggccgactacaacactcgcccacttgacaccatctacagcaacttc 491 Query: 427 atcgacgcgctcccggtggtcaagtactgctcggag-acggcaagcgtct 475 |||||||| ||||| ||||||||||||||||| ||| || |||||||||| Sbjct: 492 atcgacgcactcccagtggtcaagtactgctccgagaacagcaagcgtct 541
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 98 tggatctggacggcggcgccgtggcgccgctcaccatctgcatgatcggcgccggcggct 157 |||||||||||||| | || | ||||| ||||||||||||||||||||||||||||||| Sbjct: 42734319 tggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggct 42734260 Query: 158 tcatcggctcccacctctgcgagaagctcatggccgagacccagcacgtcgtcctcgccg 217 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 42734259 tcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccg 42734200 Query: 218 tcgacgtccactccgacaagatccgccacctcgtcgacccgccgccgccccacctcgccg 277 |||||||| ||| ||||||||||||||||||||||||||| | || ||||||||| | Sbjct: 42734199 tcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatg 42734140 Query: 278 ggcgcatctccttccaccgcctcaacatcaagaacgacccccgcctcgagggcctcgtca 337 | |||||||||||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 42734139 gccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatca 42734080 Query: 338 agatggccgatctg 351 |||||||||||||| Sbjct: 42734079 agatggccgatctg 42734066 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Minus Query: 351 gacgataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacac 410 |||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 42733983 gacgatcaacctggcggcgatctgcacgccggccgactacaacacgcgccccctcgacac 42733924 Query: 411 catctacagcaacttcatcgacgcgctcccggtggt 446 |||||||||||||||||||||||||||||| ||||| Sbjct: 42733923 catctacagcaacttcatcgacgcgctccctgtggt 42733888 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 cgccgtcgacgtccactccgacaag 237 ||||||||||||| ||||||||||| Sbjct: 7623344 cgccgtcgacgtcgactccgacaag 7623320 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 35722708 ctcgtcgacccgccgccgcc 35722689
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 305 bits (154), Expect = 7e-80 Identities = 229/254 (90%) Strand = Plus / Minus Query: 98 tggatctggacggcggcgccgtggcgccgctcaccatctgcatgatcggcgccggcggct 157 |||||||||||||| | || | ||||| ||||||||||||||||||||||||||||||| Sbjct: 67084 tggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggct 67025 Query: 158 tcatcggctcccacctctgcgagaagctcatggccgagacccagcacgtcgtcctcgccg 217 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 67024 tcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccg 66965 Query: 218 tcgacgtccactccgacaagatccgccacctcgtcgacccgccgccgccccacctcgccg 277 |||||||| ||| ||||||||||||||||||||||||||| | || ||||||||| | Sbjct: 66964 tcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatg 66905 Query: 278 ggcgcatctccttccaccgcctcaacatcaagaacgacccccgcctcgagggcctcgtca 337 | |||||||||||||||||||||||||||||||||||| || | |||||||||||| ||| Sbjct: 66904 gccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatca 66845 Query: 338 agatggccgatctg 351 |||||||||||||| Sbjct: 66844 agatggccgatctg 66831 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Minus Query: 351 gacgataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacac 410 |||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 66748 gacgatcaacctggcggcgatctgcacgccggccgactacaacacgcgccccctcgacac 66689 Query: 411 catctacagcaacttcatcgacgcgctcccggtggt 446 |||||||||||||||||||||||||||||| ||||| Sbjct: 66688 catctacagcaacttcatcgacgcgctccctgtggt 66653
>gb|AY103666.1| Zea mays PCO119463 mRNA sequence Length = 1518 Score = 155 bits (78), Expect = 2e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 355 ataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacaccatc 414 ||||||||||| ||||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 198 ataaacctggccgcgatctgcacgccggccgactacaacactcgcccactcgacaccatc 257 Query: 415 tacagcaacttcatcgacgcgctcccggtggtcaagtactgctcggag-acggcaagcgt 473 |||||||||||||||||||| ||||| ||||||||||||||||| ||| || |||||||| Sbjct: 258 tacagcaacttcatcgacgcactcccagtggtcaagtactgctccgagaacagcaagcgt 317 Query: 474 ct 475 || Sbjct: 318 ct 319
>gb|AY088462.1| Arabidopsis thaliana clone 6892 mRNA, complete sequence Length = 1573 Score = 89.7 bits (45), Expect = 8e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||||||||| |||||||||||||| || || |||||||| || || || || ||||| | Sbjct: 362 tcaagatggcagatctgacgataaatctagctgcgatctgtactcccgcagattacaata 421 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 |||| || || ||||| ||||||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 422 cgcgtcctcttgacactatctacagcaatttcattgatgctctcccagtggttaagtact 481 Query: 455 gctcggaga 463 |||| |||| Sbjct: 482 gctcagaga 490 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 163 tgcatgatcggtgccggaggtttcattggctctcatctctgtgagaagct 212
>ref|NM_100694.2| Arabidopsis thaliana AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) AT1G08200 (AXS2) mRNA, complete cds Length = 1672 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||||||||| |||||||||||||| || || |||||||| || || || || ||||| | Sbjct: 363 tcaagatggcagatctgacgataaatctagctgcgatctgtactccagcagattacaata 422 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 |||| || || ||||| ||||||||||| ||||| || || ||||| ||||| || |||| Sbjct: 423 cgcgtcctcttgacactatctacagcaatttcattgatgctctcccagtggttaaatact 482 Query: 455 gctcggaga 463 |||| |||| Sbjct: 483 gctcagaga 491 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 164 tgcatgatcggtgccggaggtttcattggctctcatctctgtgagaagct 213
>gb|AY042880.1| Arabidopsis thaliana similar to dihydroflavonol reductase (T23G18.6) mRNA, complete cds Length = 1561 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||||||||| |||||||||||||| || || |||||||| || || || || ||||| | Sbjct: 344 tcaagatggcagatctgacgataaatctagctgcgatctgtactccagcagattacaata 403 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 |||| || || ||||| ||||||||||| ||||| || || ||||| ||||| || |||| Sbjct: 404 cgcgtcctcttgacactatctacagcaatttcattgatgctctcccagtggttaaatact 463 Query: 455 gctcggaga 463 |||| |||| Sbjct: 464 gctcagaga 472 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||| ||||| || ||||| ||||| || |||||||||||||| Sbjct: 145 tgcatgatcggtgccggaggtttcattggctctcatctctgcgagaagct 194
>gb|BT001220.1| Arabidopsis thaliana similar to dihydroflavonol reductase (At1g08200) mRNA, complete cds Length = 1212 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||||||||| |||||||||||||| || || |||||||| || || || || ||||| | Sbjct: 260 tcaagatggcagatctgacgataaatctagctgcgatctgtactccagcagattacaata 319 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 |||| || || ||||| ||||||||||| ||||| || || ||||| ||||| || |||| Sbjct: 320 cgcgtcctcttgacactatctacagcaatttcattgatgctctcccagtggttaaatact 379 Query: 455 gctcggaga 463 |||| |||| Sbjct: 380 gctcagaga 388 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 61 tgcatgatcggtgccggaggtttcattggctctcatctctgtgagaagct 110
>gb|DQ339463.1| Vitis pseudoreticulata UDP-D-apiose/UDP-D-xylose synthase mRNA, complete cds Length = 882 Score = 79.8 bits (40), Expect = 8e-12 Identities = 139/172 (80%) Strand = Plus / Plus Query: 292 caccgcctcaacatcaagaacgacccccgcctcgagggcctcgtcaagatggccgatctg 351 |||||| ||||||||||| |||| | | ||||| || ||| |||||||||| |||||| Sbjct: 214 caccgcatcaacatcaagcacgattcgaggctcgaaggactcatcaagatggcagatctg 273 Query: 352 acgataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacacc 411 || || || |||||||||||||| || || ||||||||||| || || || ||||| || Sbjct: 274 actatcaatctggcggcgatctgtactcccgcggactacaatactcgtcctctcgatacg 333 Query: 412 atctacagcaacttcatcgacgcgctcccggtggtcaagtactgctcggaga 463 || |||||||| ||||| || || || || ||||| || ||||| ||||||| Sbjct: 334 atttacagcaatttcattgatgcccttccagtggtgaaatactgttcggaga 385 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 139 atgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgagac 197 |||||||||||||| || ||||| || || ||||||||||||||||| ||||||||||| Sbjct: 61 atgatcggcgccggaggattcataggatcgcacctctgcgagaagcttatggccgagac 119
>gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAXs) mRNA, complete cds Length = 1375 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatg 189 ||||||||||||||||| |||||||| ||||||||| | ||||||||||||||| Sbjct: 93 tgcatgatcggcgccggtggcttcattggctcccacttatgcgagaagctcatg 146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||| ||||| |||||||| |||| || || ||||||||||| || || || || || | Sbjct: 292 tcaaaatggcagatctgactgtaaatcttgctgcgatctgcactccagctgattataata 351 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 | || || || ||||| ||||||||||||||||| || || || || ||||| ||||||| Sbjct: 352 cacgtccacttgacacaatctacagcaacttcattgatgctctaccagtggttaagtact 411 Query: 455 gctc 458 |||| Sbjct: 412 gctc 415
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 142 atcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccga 194 ||||||| ||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 42424 atcggcggcggaggcttcatcggatctcacctctgcgagaagctcatggccga 42476 Score = 48.1 bits (24), Expect = 0.027 Identities = 78/96 (81%) Strand = Plus / Plus Query: 351 gacgataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacac 410 |||||| || || ||||| || || ||||||||||| |||||||| || ||| | || || Sbjct: 42716 gacgattaatcttgcggcaatttgtacgccggcggattacaacactcgcccgttggatac 42775 Query: 411 catctacagcaacttcatcgacgcgctcccggtggt 446 ||||||||||| ||||| || ||| | |||||||| Sbjct: 42776 gatctacagcaatttcattgatgcgattccggtggt 42811
>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence Length = 115175 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 133 atctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatg 189 |||||||| |||||||| || || |||||||| || |||||||| |||||||||||| Sbjct: 12397 atctgcattatcggcgctggaggtttcatcggttctcacctctgtgagaagctcatg 12453
>gb|AY391715.1| Nicotiana benthamiana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA, complete cds Length = 1164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 367 gcgatctgcacgccggcggactacaacacgcggccgctcgacaccatctacagcaacttc 426 |||||||||||||| || || ||||| || || || || ||||| ||||||||||||||| Sbjct: 286 gcgatctgcacgccagctgattacaatactcgtccacttgacacaatctacagcaacttc 345 Query: 427 atcgacgc 434 || ||||| Sbjct: 346 attgacgc 353 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||||||||| || ||||| || |||||| | || |||||||| Sbjct: 55 tgcatgatcggcgccggtggtttcattgggtcccacttatgtgagaagct 104
>gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence Length = 1541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 335 tcaagatggccgatctgacgataaacctggcggcgatctgcacgccggcggactacaaca 394 |||| ||||| |||||||| |||| || || || |||||||| || || || || || | Sbjct: 311 tcaaaatggcagatctgactgtaaatcttgctgcaatctgcactccagctgattataata 370 Query: 395 cgcggccgctcgacaccatctacagcaacttcatcgacgcgctcccggtggtcaagtact 454 | || ||||| ||||| ||||||||||||||||| || || || || ||||| ||||||| Sbjct: 371 cacgtccgcttgacacaatctacagcaacttcattgatgctctaccagtggttaagtact 430 Query: 455 gctc 458 |||| Sbjct: 431 gctc 434 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatg 189 ||||||||||||||||| || ||||| ||||| ||| | || |||||||||||| Sbjct: 112 tgcatgatcggcgccggtggattcattggctcgcacttatgtgagaagctcatg 165
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccga 194 ||||| || ||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 192633 cggcggcgccggcttcatcggctcgcacctctgcgacaagctgttggccga 192683
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 148 gccggcggcttcatcggctcccacctc 174 ||||||||||||||||||||||||||| Sbjct: 53451 gccggcggcttcatcggctcccacctc 53477
>ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1) AT2G27860 (AXS1) mRNA, complete cds Length = 1516 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 116 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 175 Query: 196 ac 197 || Sbjct: 176 ac 177
>gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G27860 mRNA, complete cds Length = 1514 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 125 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 184 Query: 196 ac 197 || Sbjct: 185 ac 186
>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR4 Length = 87724 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 289 ttccaccgcctcaacatcaagaacgacccccgcctcgagggcctcgtcaagatggccgat 348 |||||||||||||| || |||||||| | |||||||| |||||| |||| ||||| ||| Sbjct: 11772 ttccaccgcctcaatattaagaacgattctcgcctcgaaggcctcatcaaaatggcagat 11831 Query: 349 ct 350 || Sbjct: 11832 ct 11833 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 139 atgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgagacc 198 ||||| |||||||| || ||||| || || ||||| ||||||||||||||| | ||||| Sbjct: 11622 atgattggcgccggaggtttcatagggtcgcacctgtgcgagaagctcatgtcggagacg 11681 Query: 199 cagcac 204 |||||| Sbjct: 11682 cagcac 11687
>gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 61 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 120 Query: 196 ac 197 || Sbjct: 121 ac 122
>gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 61 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 120 Query: 196 ac 197 || Sbjct: 121 ac 122
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete sequence Length = 94884 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 94237 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 94296 Query: 196 ac 197 || Sbjct: 94297 ac 94298
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 12894 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 12953 Query: 196 ac 197 || Sbjct: 12954 ac 12955
>gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds Length = 1386 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 113 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 172 Query: 196 ac 197 || Sbjct: 173 ac 174
>gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete sequence Length = 1496 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 119 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 178 Query: 196 ac 197 || Sbjct: 179 ac 180
>gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27860) mRNA, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgag 195 ||||||||||||||||| || |||||||| || || ||||| || |||||| || ||||| Sbjct: 61 tgcatgatcggcgccggaggtttcatcggttcacatctctgtgaaaagctcttgaccgag 120 Query: 196 ac 197 || Sbjct: 121 ac 122
>gb|AC144515.14| Medicago truncatula clone mth2-5j8, complete sequence Length = 119095 Score = 48.1 bits (24), Expect = 0.027 Identities = 66/80 (82%) Strand = Plus / Plus Query: 367 gcgatctgcacgccggcggactacaacacgcggccgctcgacaccatctacagcaacttc 426 ||||| ||||| |||||||| || ||||||||||| | || || || ||||| || ||| Sbjct: 86981 gcgatttgcacaccggcggattataacacgcggcctttggatactatttacagtaatttc 87040 Query: 427 atcgacgcgctcccggtggt 446 ||||| ||| |||||||||| Sbjct: 87041 atcgatgcgatcccggtggt 87060
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 153 cggcttcatcggctcccacctctgcgag 180 ||||||| |||||||||||||||||||| Sbjct: 171953 cggcttcctcggctcccacctctgcgag 171926 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gccggcggcttcatcggctc 167 |||||||||||||||||||| Sbjct: 3905809 gccggcggcttcatcggctc 3905790
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I, complete sequence Length = 91470 Score = 48.1 bits (24), Expect = 0.027 Identities = 78/96 (81%) Strand = Plus / Minus Query: 351 gacgataaacctggcggcgatctgcacgccggcggactacaacacgcggccgctcgacac 410 ||||||||| || || |||||||| || || || || ||||| ||||| || || ||||| Sbjct: 34105 gacgataaatctagctgcgatctgtactccagcagattacaatacgcgtcctcttgacac 34046 Query: 411 catctacagcaacttcatcgacgcgctcccggtggt 446 ||||||||||| ||||| || || ||||| ||||| Sbjct: 34045 tatctacagcaatttcattgatgctctcccagtggt 34010 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Minus Query: 136 tgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagct 185 ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 34467 tgcatgatcggtgccggaggtttcattggctctcatctctgtgagaagct 34418
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 153 cggcttcatcggctcccacctctgcga 179 ||||||||||||||||||||| ||||| Sbjct: 27829 cggcttcatcggctcccacctgtgcga 27855
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 95 gggtggatctggacggcggcgcc 117 ||||||||||||||||||||||| Sbjct: 1480236 gggtggatctggacggcggcgcc 1480214 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcaagaacgacccccgcctc 324 |||||||||||||||||||| Sbjct: 615359 tcaagaacgacccccgcctc 615378
>ref|XM_468203.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 432 cttcatcgacgcgctcccggtg 453
>ref|XM_507020.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1046_F07.20 mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 469 cttcatcgacgcgctcccggtg 490
>emb|Z99119.2|BSUB0016 Bacillus subtilis complete genome (section 16 of 21): from 3013458 to 3213379 Length = 199922 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcga 179 ||||| |||||||||||||||||||| Sbjct: 142625 ggctttatcggctcccacctctgcga 142650
>gb|BC108122.1| Bos taurus cDNA clone MGC:128440 IMAGE:7984151, complete cds Length = 2764 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 316 ccccgcctcgagggcctcgtcaagat 341 |||||||||||||||||||| ||||| Sbjct: 1802 ccccgcctcgagggcctcgtgaagat 1827
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 33599274 cttcatcgacgcgctcccggtg 33599253
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 cggcttcatcggctcccacctc 174 |||||||||||||||||||||| Sbjct: 144142 cggcttcatcggctcccacctc 144163
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 69945 cttcatcgacgcgctcccggtg 69924
>dbj|AK101056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021A14, full insert sequence Length = 1609 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 431 cttcatcgacgcgctcccggtg 452
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcccacct 173 |||||||| |||||||||||||| |||||| Sbjct: 3620916 cggcgccgccggcttcatcggcttccacct 3620945
>dbj|AK064699.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-G03, full insert sequence Length = 1751 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 cttcatcgacgcgctcccggtg 444 |||||||||||||||||||||| Sbjct: 469 cttcatcgacgcgctcccggtg 490
>gb|AF008220.1|AF008220 Bacillus subtilis rrnB-dnaB genomic region Length = 220060 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 154 ggcttcatcggctcccacctctgcga 179 ||||| |||||||||||||||||||| Sbjct: 22084 ggctttatcggctcccacctctgcga 22059
>ref|NM_188684.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 cgccgtcgacgtccactccgacaag 237 ||||||||||||| ||||||||||| Sbjct: 144 cgccgtcgacgtcgactccgacaag 168
>ref|XM_550364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1373 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 tcatcgacgcgctcccggtggtcaagtac 453 |||||||||||||||||||| ||| |||| Sbjct: 467 tcatcgacgcgctcccggtgttcatgtac 495
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 acctcgtcgacccgccgccgc 265 ||||||||||||||||||||| Sbjct: 2816313 acctcgtcgacccgccgccgc 2816333
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 tcgacgcgctcccggtggtca 448 ||||||||||||||||||||| Sbjct: 56387 tcgacgcgctcccggtggtca 56407
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||| |||||||||||||||| Sbjct: 81929 cggcgccgccggcttcatcggctcc 81905
>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 67651 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcccacctctgcgag 180 ||||| || ||||||| |||| ||||||||||||||| Sbjct: 45001 cggcggcgccggcttcctcggttcccacctctgcgag 45037
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 9409386 ggcttcatcggctcgcacctcgtcgacaagctcatgg 9409422
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cgccgctcaccatctgcatga 142 ||||||||||||||||||||| Sbjct: 84767 cgccgctcaccatctgcatga 84747
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 acggcggcgccgtggcgccgc 127 ||||||||||||||||||||| Sbjct: 400391 acggcggcgccgtggcgccgc 400411
>emb|AJ440712.1|LAL440712 Linum album mRNA for cinnamoyl-CoA reductase (ccr gene) Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 171 cggcgccggcggcttcatcgcctcc 195
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 106786 ggcttcatcggctcgcacctcgtcgacaagctcatgg 106822
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 tcatcgacgcgctcccggtggtcaagtac 453 |||||||||||||||||||| ||| |||| Sbjct: 3388972 tcatcgacgcgctcccggtgttcatgtac 3388944
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 9407507 ggcttcatcggctcgcacctcgtcgacaagctcatgg 9407543
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete cds Length = 1433 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 202 ggcttcatcggctcgcacctcgtcgacaagctcatgg 238
>gb|AF297877.1|AF297877 Eucalyptus saligna cinnamoyl-CoA reductase (ccr) gene, complete cds Length = 3016 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 142 cggcgccggcggcttcatcgcctcc 166
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 cgccgtcgacgtccactccgacaag 237 ||||||||||||| ||||||||||| Sbjct: 33920 cgccgtcgacgtcgactccgacaag 33896
>gb|AY098581.1|AY098581S1 Eucalyptus globulus cinnamoyl CoA reductase (CCR) gene, exons 1 and 2 Length = 771 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 48 cggcgccggcggcttcatcgcctcc 72
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 tcatcgacgcgctcccggtggtcaagtac 453 |||||||||||||||||||| ||| |||| Sbjct: 5676 tcatcgacgcgctcccggtgttcatgtac 5648
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 tcatcgacgcgctcccggtggtcaagtac 453 |||||||||||||||||||| ||| |||| Sbjct: 80526 tcatcgacgcgctcccggtgttcatgtac 80498
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1053 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 130 ggcttcatcggctcgcacctcgtcgacaagctcatgg 166
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene) Length = 1562 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 368 ggcttcatcggctcgcacctcgtcgacaagctcatgg 404
>emb|X97433.1|EGCCR1GEN E.gunnii CCR1 gene Length = 3202 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 239 cggcgccggcggcttcatcgcctcc 263
>ref|XM_314643.2| Anopheles gambiae str. PEST ENSANGP00000020142 (ENSANGG00000017653), partial mRNA Length = 1353 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cccgtcgcggatccgaccgtc 35 ||||||||||||||||||||| Sbjct: 748 cccgtcgcggatccgaccgtc 768
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full insert sequence Length = 1811 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 618 ggcttcatcggctcgcacctcgtcgacaagctcatgg 654
>dbj|AK100240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P08, full insert sequence Length = 1375 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 tcatcgacgcgctcccggtggtcaagtac 453 |||||||||||||||||||| ||| |||| Sbjct: 467 tcatcgacgcgctcccggtgttcatgtac 495
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacctctgcgagaagctcatgg 190 |||||||||||||| |||||| ||| |||||||||| Sbjct: 229 ggcttcatcggctcgcacctcgtcgacaagctcatgg 265
>emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone 3D10 complete sequence Length = 36858 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aagatccgccacctcgtcgac 255 ||||||||||||||||||||| Sbjct: 27415 aagatccgccacctcgtcgac 27435
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||| |||||||||||||||| Sbjct: 3317270 cggcgccgccggcttcatcggctcc 3317246 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 4737823 tgatcggcgccggcggcttc 4737842
>gb|AY656821.1| Eucalyptus globulus voucher UTAS1580 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3213 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 113 cggcgccggcggcttcatcgcctcc 137
>gb|AY656820.1| Eucalyptus globulus voucher UTAS1042 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3230 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 92 cggcgccggcggcttcatcgcctcc 116
>gb|AY656819.1| Eucalyptus globulus voucher UTAS1270 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3051 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 85 cggcgccggcggcttcatcgcctcc 109
>gb|AY656818.1| Eucalyptus globulus voucher UTAS1180 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3074 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 82 cggcgccggcggcttcatcgcctcc 106
>gb|AY656817.1| Eucalyptus cordata voucher UTAS1498 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3042 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctcc 168 |||||||||||||||||||| |||| Sbjct: 89 cggcgccggcggcttcatcgcctcc 113
>dbj|AB044709.1| Gryllus bimaculatus mRNA for hedgehog protein, partial cds Length = 2963 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cggcggcgccgtggcgccgctcacc 132 |||||||| |||||||||||||||| Sbjct: 988 cggcggcgtcgtggcgccgctcacc 1012
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctc 167 |||||||||||| ||||||||||| Sbjct: 35508 cggcgccggcgggttcatcggctc 35531 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctc 167 |||||||||||| ||||||||||| Sbjct: 26421 cggcgccggcgggttcatcggctc 26444 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctc 167 |||||||||||| ||||||||||| Sbjct: 21836 cggcgccggcgggttcatcggctc 21859
>ref|XM_511248.1| PREDICTED: Pan troglodytes similar to active breakpoint cluster region-related protein isoform a (LOC454408), mRNA Length = 9271 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 237 tcgacaccctctacagcaacttca 260
>ref|XM_481269.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 539 tggacggcggcgccgtggcg 558
>ref|XM_482584.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gacggcggcgccgtggcgcc 125 |||||||||||||||||||| Sbjct: 566 gacggcggcgccgtggcgcc 547
>ref|NM_197592.1| Oryza sativa (japonica cultivar-group) putative pollen allergen (OSJNBb0015I11.10), mRNA Length = 898 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 848 cggcgatctgcacgccggcg 829
>ref|XM_478519.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtcctcgccgtcgacgtcc 226 |||||||||||||||||||| Sbjct: 365 cgtcctcgccgtcgacgtcc 384
>ref|NM_145608.1| Mus musculus cDNA sequence BC021891 (BC021891), mRNA Length = 3616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 567 tgatcggcgccggcggcttc 586
>ref|XM_473047.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 589 tcctcgccgtcgacgtccac 608
>ref|NM_021962.2| Homo sapiens active BCR-related gene (ABR), transcript variant 1, mRNA Length = 5300 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 154 tcgacaccctctacagcaacttca 177
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 36792 ctcgtcgacccgccgccgcc 36773
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 171371 ctcgtcgacccgccgccgcc 171352
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ggtggatctggacggcggcg 115 |||||||||||||||||||| Sbjct: 27544 ggtggatctggacggcggcg 27525
>ref|XM_368949.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00295.4) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gagggagagcatggcgagcg 88 |||||||||||||||||||| Sbjct: 507 gagggagagcatggcgagcg 526
>gb|BC021891.1| Mus musculus cDNA sequence BC021891, mRNA (cDNA clone MGC:27778 IMAGE:3156324), complete cds Length = 3616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 567 tgatcggcgccggcggcttc 586
>ref|NM_198895.1| Mus musculus active BCR-related gene (Abr), transcript variant 3, mRNA Length = 5260 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 327 tcgacaccctctacagcaacttca 350
>gb|AC105066.12| Mus musculus chromosome 8, clone RP23-158A22, complete sequence Length = 238527 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 26548 tgatcggcgccggcggcttc 26529
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ccagcacgtcgtcctcgccgtcga 221 ||||||||| |||||||||||||| Sbjct: 1813977 ccagcacgtagtcctcgccgtcga 1814000
>ref|XM_383224.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03048.1) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcttcatcggctcccacct 173 |||||||||||||||||||| Sbjct: 67 ggcttcatcggctcccacct 86
>ref|XM_849228.1| PREDICTED: Canis familiaris similar to active BCR-related gene isoform 1, transcript variant 2 (LOC480638), mRNA Length = 3257 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 44 tcgacaccctctacagcaacttca 67
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 19531 tcctcgccgtcgacgtccac 19512
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcg 163 |||||||||||||||||||| Sbjct: 1303574 cggcgccggcggcttcatcg 1303593
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 atgatcggcgccggcggctt 158 |||||||||||||||||||| Sbjct: 336990 atgatcggcgccggcggctt 336971 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 228 ctccgacaagatccgccacctcgtcgac 255 ||||||||||| ||||||| |||||||| Sbjct: 190391 ctccgacaagacccgccacgtcgtcgac 190364
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 127059 gccgccgccccacctcgccg 127078
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 131270 gccgccgccccacctcgccg 131251
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cacgtcgtcctcgccgtcgacgtc 225 ||||||| |||||||||||||||| Sbjct: 106746 cacgtcgccctcgccgtcgacgtc 106723
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA, complete cds Length = 1489 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcg 163 |||||||||||||||||||| Sbjct: 226 cggcgccggcggcttcatcg 245
>dbj|AK220424.1| Mus musculus mRNA for mKIAA1804 protein Length = 5693 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 571 tgatcggcgccggcggcttc 590
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcgccgtggcgccgctcacc 132 |||||||||||||||||||| Sbjct: 4887602 gcgccgtggcgccgctcacc 4887583
>gb|AC110611.3| Homo sapiens BAC clone RP11-345F18 from 4, complete sequence Length = 195155 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gggggcagggtggatctgga 107 |||||||||||||||||||| Sbjct: 93716 gggggcagggtggatctgga 93735
>dbj|AK142364.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430023K22 product:active BCR-related gene, full insert sequence Length = 1496 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 319 tcgacaccctctacagcaacttca 342
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 63396 cggcgatctgcacgccggcg 63377
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 ctccgacaagatccgccacctcgtcgac 255 ||||||||||| ||||||| |||||||| Sbjct: 2961435 ctccgacaagacccgccacgtcgtcgac 2961462
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 24898946 tcctcgccgtcgacgtccac 24898927 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 15259573 ctcgtcgacccgccgccgcc 15259554 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 14970321 gccgccgccccacctcgccg 14970340 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 14641616 ctcgtcgacccgccgccgcc 14641597 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 14398351 gccgccgccccacctcgccg 14398332
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgtcctcgccgtcgacgtc 225 |||||||||||||||||||| Sbjct: 16428461 tcgtcctcgccgtcgacgtc 16428480
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 20661944 cggcgatctgcacgccggcg 20661925
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 1958750 ctcgtcgacccgccgccgcc 1958731
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gacggcggcgccgtggcgcc 125 |||||||||||||||||||| Sbjct: 21234399 gacggcggcgccgtggcgcc 21234380 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 11123659 tggacggcggcgccgtggcg 11123640
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtcctcgccgtcgacgtcc 226 |||||||||||||||||||| Sbjct: 20699783 cgtcctcgccgtcgacgtcc 20699764
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 16085622 ctcgtcgacccgccgccgcc 16085603 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ggtggatctggacggcggcg 115 |||||||||||||||||||| Sbjct: 7749958 ggtggatctggacggcggcg 7749939
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ccgacaagatccgccacctcgtcg 253 ||||| |||||||||||||||||| Sbjct: 2096171 ccgaccagatccgccacctcgtcg 2096194
>ref|XM_226572.3| PREDICTED: Rattus norvegicus similar to Mixed lineage kinase 4 (predicted) (LOC307950), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgatcggcgccggcggcttc 159 |||||||||||||||||||| Sbjct: 344 tgatcggcgccggcggcttc 363
>ref|XM_220717.3| PREDICTED: Rattus norvegicus active BCR-related gene (predicted) (Abr_predicted), mRNA Length = 5220 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 339 tcgacaccctctacagcaacttca 362
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cggcggcgccgtggcgccgc 127 |||||||||||||||||||| Sbjct: 1445460 cggcggcgccgtggcgccgc 1445479
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 126045 ctcgtcgacccgccgccgcc 126026
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cggcttcatcggctcccacc 172 |||||||||||||||||||| Sbjct: 752575 cggcttcatcggctcccacc 752594
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ctgcatgatcggcgccggcg 154 |||||||||||||||||||| Sbjct: 2963771 ctgcatgatcggcgccggcg 2963752
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gcgagcgggggcagggtgga 101 |||||||||||||||||||| Sbjct: 1298657 gcgagcgggggcagggtgga 1298676
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 93120 ctcgtcgacccgccgccgcc 93139
>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025H18 Length = 176201 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 107918 ctcgtcgacccgccgccgcc 107899
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtcctcgccgtcgacgtcc 226 |||||||||||||||||||| Sbjct: 52533 cgtcctcgccgtcgacgtcc 52514
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gacggcggcgccgtggcgcc 125 |||||||||||||||||||| Sbjct: 60676 gacggcggcgccgtggcgcc 60657
>dbj|AK121011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047C08, full insert sequence Length = 2003 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 863 tcctcgccgtcgacgtccac 882
>dbj|AK112074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A10, full insert sequence Length = 1701 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 611 tggacggcggcgccgtggcg 630
>dbj|AK111905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058D01, full insert sequence Length = 1705 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 615 tggacggcggcgccgtggcg 634
>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1446H11 Length = 135488 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 94265 tggacggcggcgccgtggcg 94246
>ref|XM_310640.2| Anopheles gambiae str. PEST ENSANGP00000020019 (ENSANGG00000017530), partial mRNA Length = 4566 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 tggcggcgatctgcacgccggcgg 385 ||||||||||| |||||||||||| Sbjct: 2543 tggcggcgatcggcacgccggcgg 2566
>dbj|AK107269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H09, full insert sequence Length = 1461 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtcctcgccgtcgacgtcc 226 |||||||||||||||||||| Sbjct: 365 cgtcctcgccgtcgacgtcc 384
>dbj|AK069369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013E03, full insert sequence Length = 2417 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 88 gccgccgccccacctcgccg 107
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctc 167 |||||||||||| ||||||||||| Sbjct: 142 cggcgccggcgggttcatcggctc 165
>dbj|AK068088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131C11, full insert sequence Length = 1196 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 1032 cggcgatctgcacgccggcg 1013
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ccgccgccgccccacctcgc 275 |||||||||||||||||||| Sbjct: 1002571 ccgccgccgccccacctcgc 1002552
>dbj|AK066611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071J19, full insert sequence Length = 1023 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 864 cggcgatctgcacgccggcg 845
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cggcgccggcggcttcatcggctc 167 |||||||||||| ||||||||||| Sbjct: 141 cggcgccggcgggttcatcggctc 164
>dbj|AK061480.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G10, full insert sequence Length = 906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gccgccgccccacctcgccg 277 |||||||||||||||||||| Sbjct: 123 gccgccgccccacctcgccg 142
>dbj|AK059661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E02, full insert sequence Length = 2020 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 946 tcctcgccgtcgacgtccac 965
>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0560B10, complete sequence Length = 108295 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tggacggcggcgccgtggcg 123 |||||||||||||||||||| Sbjct: 82175 tggacggcggcgccgtggcg 82156
>dbj|AB070585.1| Bradyrhizobium elkanii gyrB gene for DNA gyrase subunit B, partial cds, strain:USDA94 Length = 909 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 acggcggcgccgtggcgccgctca 130 |||||| ||||||||||||||||| Sbjct: 356 acggcgacgccgtggcgccgctca 379
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcgccgtggcgccgctcacc 132 |||||||||||||||||||| Sbjct: 4890620 gcgccgtggcgccgctcacc 4890601
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gatccgccacctcgtcgacc 256 |||||||||||||||||||| Sbjct: 1613059 gatccgccacctcgtcgacc 1613040
>gb|U01147.1|U01147 Human guanine nucleotide regulatory protein (ABR) mRNA, complete cds Length = 5265 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 404 tcgacaccatctacagcaacttca 427 |||||||| ||||||||||||||| Sbjct: 154 tcgacaccctctacagcaacttca 177
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgcgaccgccgggggagcg 69 |||||||||||||||||||| Sbjct: 916278 gcgcgaccgccgggggagcg 916297
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcgatctgcacgccggcg 384 |||||||||||||||||||| Sbjct: 20673216 cggcgatctgcacgccggcg 20673197
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcgtcctcgccgtcgacgtc 225 |||||||||||||||||||| Sbjct: 16381691 tcgtcctcgccgtcgacgtc 16381710
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcgtcctcgccgtcgacgtc 225 |||||||||||||||||||| Sbjct: 145332 tcgtcctcgccgtcgacgtc 145313
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcctcgccgtcgacgtccac 228 |||||||||||||||||||| Sbjct: 160662 tcctcgccgtcgacgtccac 160643
>emb|AL606599.3|OSJN00034 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0050F15, complete sequence Length = 150562 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ctcgtcgacccgccgccgcc 266 |||||||||||||||||||| Sbjct: 109753 ctcgtcgacccgccgccgcc 109734
>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127989 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcgtcctcgccgtcgacgtc 225 |||||||||||||||||||| Sbjct: 23930 tcgtcctcgccgtcgacgtc 23911
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 cgcgccgcgcgaccgccgggggagcgag 71 |||||||||||||||||| ||| ||||| Sbjct: 76425 cgcgccgcgcgaccgccgcgggcgcgag 76452
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ggtggatctggacggcggcg 115 |||||||||||||||||||| Sbjct: 60466 ggtggatctggacggcggcg 60447
>dbj|AB083299.1| Corynebacterium efficiens pyc gene for pyruvate carboxylase, complete cds Length = 4851 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cggcttcatcggctcccacc 172 |||||||||||||||||||| Sbjct: 2509 cggcttcatcggctcccacc 2528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,196,331 Number of Sequences: 3902068 Number of extensions: 3196331 Number of successful extensions: 72576 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67565 Number of HSP's gapped (non-prelim): 5009 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
