ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast65a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN692_HUMAN (Q9BU19) Zinc finger protein 692 30 2.4
2ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoce... 29 3.1
3KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3... 29 4.1

>ZN692_HUMAN (Q9BU19) Zinc finger protein 692|
          Length = 519

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +2

Query: 5   HPAPL--PTQT-CGEVQPCASFSHGGPLDSSAGWRRSSRTAA 121
           HPA L  P ++  G ++PC S S  GPL SS G R S+   A
Sbjct: 471 HPALLLAPQESPSGPLEPCPSISAPGPLGSSEGSRPSASPQA 512



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>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 480

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   PHPAPLPTQTCGEVQPCASFSHGGPL-DSSAGWRRSSRTAAGRRPR 136
           P P+P+P    G  +P A+ +   PL +  AG RR SR  A R  +
Sbjct: 279 PSPSPVPAPPPGPPRPAAAAATTAPLVNGRAGKRRPSRLVALREQK 324



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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 14  PLPTQTCGEVQPCASF---SHGGPLDSSAGWRRSSRTAAGRRP 133
           P+ T++    QP   +   S GGP+D    WR  +R    RRP
Sbjct: 94  PINTKSSFVFQPLDEYPTSSGGGPMDDPDVWRPPTRDVTSRRP 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,374,521
Number of Sequences: 219361
Number of extensions: 245937
Number of successful extensions: 929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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