ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast64h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 6e-04
2dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic D... 52 6e-04
3dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 6e-04
4gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 46 0.040
5gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 46 0.040
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.040
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.16
8gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genom... 44 0.16
9gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genom... 44 0.16
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
11ref|XM_233542.3| PREDICTED: Rattus norvegicus procollagen, type ... 44 0.16
12gb|BC080762.1| Mus musculus TBC1 domain family, member 4, mRNA (... 42 0.62
13ref|XM_619279.3| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
14ref|XM_919007.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
15ref|XM_919062.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
16ref|XM_919002.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
17ref|XM_919052.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
18ref|XM_904849.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
19ref|XM_973368.1| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
20ref|XM_884420.2| PREDICTED: Mus musculus TBC1 domain family, mem... 42 0.62
21gb|BC064433.1| Mus musculus TBC1 domain family, member 4, mRNA (... 42 0.62
22emb|BX047060.1|CNS098H4 Single read from an extremity of a full-... 42 0.62
23emb|BX047059.1|CNS098H3 Single read from an extremity of a full-... 42 0.62
24dbj|AK039337.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 42 0.62
25dbj|AK044719.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 0.62
26dbj|AK031120.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 42 0.62
27gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds 40 2.5
28ref|NM_192062.1| Oryza sativa (japonica cultivar-group), predic... 40 2.5
29ref|XM_362098.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 2.5
30gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 2.5
31ref|XM_870740.1| PREDICTED: Bos taurus similar to Interferon reg... 40 2.5
32ref|XM_533365.2| PREDICTED: Canis familiaris similar to RNA poly... 40 2.5
33emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 2.5
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
36dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 2.5
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.5
38dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
39dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
40dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
41gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the c... 40 2.5
42gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 2.5
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 2.5
44gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromos... 40 2.5
45dbj|D45382.2|STMAFSK1 Streptomyces coelicolor genes for KbpA, af... 40 2.5
46dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gen... 40 2.5
47gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 38 9.7
48ref|XM_514029.1| PREDICTED: Pan troglodytes LOC457552 (LOC457552... 38 9.7
49ref|NM_007314.1| Homo sapiens v-abl Abelson murine leukemia vira... 38 9.7
50ref|XM_585702.2| PREDICTED: Bos taurus similar to Zinc finger an... 38 9.7
51gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 38 9.7
52ref|XM_875030.1| PREDICTED: Bos taurus hypothetical protein LOC6... 38 9.7
53gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.7
54ref|XM_854603.1| PREDICTED: Canis familiaris similar to tousled-... 38 9.7
55emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chr... 38 9.7
56gb|AC125204.4| Mus musculus BAC clone RP23-237H8 from 10, comple... 38 9.7
57emb|AL512326.25| Human DNA sequence from clone RP11-345I18 on ch... 38 9.7
58gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 38 9.7
59emb|AL356119.31| Human DNA sequence from clone RP5-856H7 on chro... 38 9.7
60gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 9.7
61gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno... 38 9.7
62gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno... 38 9.7
63gb|CP000088.1| Thermobifida fusca YX, complete genome 38 9.7
64emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 38 9.7
65gb|AE005752.1| Caulobacter crescentus CB15 section 78 of 359 of ... 38 9.7
66emb|CR601496.1| full-length cDNA clone CS0DI062YF05 of Placenta ... 38 9.7
67emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 i... 38 9.7
68gb|AY965678.1| Eptatretus burgeri nonfunctional variable lymphoc... 38 9.7
69ref|XM_945487.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 9.7
70ref|XM_931426.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 9.7
71gb|DQ385561.1| Cyperus ustulatus voucher AK286797 18S ribosomal ... 38 9.7
72gb|DQ385560.1| Cyperus insularis voucher CHR569767 18S ribosomal... 38 9.7
73gb|DQ385559.1| Cyperus insularis voucher CHR569890 18S ribosomal... 38 9.7
74gb|DQ385558.1| Cyperus ustulatus voucher AK288573 18S ribosomal ... 38 9.7
75gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin bios... 38 9.7
76dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
77dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
78dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
79gb|DQ009672.1| Homo sapiens v-abl Abelson murine leukemia viral ... 38 9.7
80gb|AC087241.11| Homo sapiens 12 BAC RP11-268P4 (Roswell Park Can... 38 9.7
81dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 9.7
82dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 9.7
83dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
84emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 9.7
85gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 38 9.7
86gb|AY104742.1| Zea mays PCO152525 mRNA sequence 38 9.7
87emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-4... 38 9.7
88gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 9.7
89gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 9.7
90gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 38 9.7
91gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 9.7
92gb|U22416.1|CRU22416 Chlamydomonas reinhardtii superoxide dismut... 38 9.7
93gb|M35296.1|HUMARGCAA Human tyrosine kinase arg gene mRNA 38 9.7

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 102      gccgaggagaccgtcgccgcgcccccgccgaccccggc 139
                ||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 17618903 gccgaggagaccgtccccgcgccgccgccaaccccggc 17618940



to top

>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0564B04
          Length = 64684

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 102   gccgaggagaccgtcgccgcgcccccgccgaccccggc 139
             ||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 45251 gccgaggagaccgtccccgcgccgccgccaaccccggc 45288



to top

>dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051P18, full
           insert sequence
          Length = 1147

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 102 gccgaggagaccgtcgccgcgcccccgccgaccccggc 139
           ||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 73  gccgaggagaccgtccccgcgccgccgccaaccccggc 110



to top

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              |||||||||||||||||||||||
Sbjct: 145586 cgccgcgcccccgccgaccccgg 145608



 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              |||||||||||||||||||||||
Sbjct: 128423 cgccgcgcccccgccgaccccgg 128401



to top

>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              |||||||||||||||||||||||
Sbjct: 151418 cgccgcgcccccgccgaccccgg 151440



 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              |||||||||||||||||||||||
Sbjct: 131006 cgccgcgcccccgccgaccccgg 130984



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 143     gccggccgagggcgccccgccgc 165
               |||||||||||||||||||||||
Sbjct: 1585317 gccggccgagggcgccccgccgc 1585295



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 121      cgcccccgccgaccccggcagcgccg 146
                |||||||| |||||||||||||||||
Sbjct: 17988729 cgcccccggcgaccccggcagcgccg 17988754



to top

>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete
              sequence
          Length = 131589

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 121    cgcccccgccgaccccggcagcgccg 146
              |||||||| |||||||||||||||||
Sbjct: 127472 cgcccccggcgaccccggcagcgccg 127447



to top

>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete
             sequence
          Length = 142896

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 121   cgcccccgccgaccccggcagcgccg 146
             |||||||| |||||||||||||||||
Sbjct: 33563 cgcccccggcgaccccggcagcgccg 33538



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 121      cgcccccgccgaccccggcagcgccg 146
                |||||||| |||||||||||||||||
Sbjct: 17982270 cgcccccggcgaccccggcagcgccg 17982295



to top

>ref|XM_233542.3| PREDICTED: Rattus norvegicus procollagen, type VIII, alpha 2
            (predicted) (Col8a2_predicted), mRNA
          Length = 4583

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 157  ccccgccgctgtccgcggagccgccg 182
            ||||||||||| ||||||||||||||
Sbjct: 1012 ccccgccgctgcccgcggagccgccg 1037



to top

>gb|BC080762.1| Mus musculus TBC1 domain family, member 4, mRNA (cDNA clone
           IMAGE:5351629), partial cds
          Length = 2693

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 gcgcccccgccgaccccggca 140
           |||||||||||||||||||||
Sbjct: 663 gcgcccccgccgaccccggca 643



to top

>ref|XM_619279.3| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 2 (Tbc1d4), mRNA
          Length = 3493

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_919007.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 7 (Tbc1d4), mRNA
          Length = 3861

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_919062.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 12 (Tbc1d4), mRNA
          Length = 6675

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_919002.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 6 (Tbc1d4), mRNA
          Length = 6672

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_919052.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 11 (Tbc1d4), mRNA
          Length = 6861

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_904849.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 5 (Tbc1d4), mRNA
          Length = 6864

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_973368.1| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 1 (Tbc1d4), mRNA
          Length = 6876

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>ref|XM_884420.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript
            variant 3 (Tbc1d4), mRNA
          Length = 6876

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1076 gcgcccccgccgaccccggca 1056



to top

>gb|BC064433.1| Mus musculus TBC1 domain family, member 4, mRNA (cDNA clone
           IMAGE:4980904), partial cds
          Length = 2696

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 gcgcccccgccgaccccggca 140
           |||||||||||||||||||||
Sbjct: 669 gcgcccccgccgaccccggca 649



to top

>emb|BX047060.1|CNS098H4 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 847

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 ccccggcagcgccggccgagg 153
           |||||||||||||||||||||
Sbjct: 616 ccccggcagcgccggccgagg 596



to top

>emb|BX047059.1|CNS098H3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 852

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 ccccggcagcgccggccgagg 153
           |||||||||||||||||||||
Sbjct: 200 ccccggcagcgccggccgagg 220



to top

>dbj|AK039337.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330026C01 product:hypothetical
            Phosphotyrosine interaction (PID or PI) containing
            protein, full insert sequence
          Length = 3251

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  gcgcccccgccgaccccggca 140
            |||||||||||||||||||||
Sbjct: 1046 gcgcccccgccgaccccggca 1026



to top

>dbj|AK044719.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930035N22 product:hypothetical Phosphotyrosine
           interaction (PID or PI) containing protein, full insert
           sequence
          Length = 3104

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 gcgcccccgccgaccccggca 140
           |||||||||||||||||||||
Sbjct: 687 gcgcccccgccgaccccggca 667



to top

>dbj|AK031120.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length
           enriched library, clone:5930406J04 product:hypothetical
           Phosphotyrosine interaction (PID or PI) containing
           protein, full insert sequence
          Length = 2901

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 gcgcccccgccgaccccggca 140
           |||||||||||||||||||||
Sbjct: 889 gcgcccccgccgaccccggca 869



to top

>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  atggccgatccagccgagga 109
           ||||||||||||||||||||
Sbjct: 1   atggccgatccagccgagga 20



to top

>ref|NM_192062.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 112 ccgtcgccgcgcccccgccgaccccggc 139
           |||||||||| ||||| |||||||||||
Sbjct: 230 ccgtcgccgccccccctccgaccccggc 203



to top

>ref|XM_362098.1| Magnaporthe grisea 70-15 hypothetical protein (MG04543.4) partial
           cds
          Length = 1350

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 aggagaccgtcgccgcgccc 125
           ||||||||||||||||||||
Sbjct: 257 aggagaccgtcgccgcgccc 276



to top

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 133     ccccggcagcgccggccgag 152
               ||||||||||||||||||||
Sbjct: 1160615 ccccggcagcgccggccgag 1160596



to top

>ref|XM_870740.1| PREDICTED: Bos taurus similar to Interferon regulatory factor 4
            (IRF-4) (Lymphocyte specific interferon regulatory
            factor) (LSIRF) (NF-EM5) (Multiple myeloma oncogene 1)
            (LOC618409), mRNA
          Length = 1584

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  cggagccgccggccagcgcc 191
            ||||||||||||||||||||
Sbjct: 1085 cggagccgccggccagcgcc 1104



to top

>ref|XM_533365.2| PREDICTED: Canis familiaris similar to RNA polymerase II subunit A
            C-terminal domain phosphatase (TFIIF-associating CTD
            phosphatase), transcript variant 1 (LOC476158), mRNA
          Length = 2802

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 165  ctgtccgcggagccgccggccagc 188
            |||||||||||||| |||||||||
Sbjct: 1574 ctgtccgcggagccaccggccagc 1551



to top

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   ccgtcgccgcgcccccgccg 131
             ||||||||||||||||||||
Sbjct: 11001 ccgtcgccgcgcccccgccg 11020



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     gcgccccgccgctgtccgcg 173
               ||||||||||||||||||||
Sbjct: 6179802 gcgccccgccgctgtccgcg 6179821



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 112      ccgtcgccgcgcccccgccgaccccggc 139
                |||||||||| ||||| |||||||||||
Sbjct: 28126665 ccgtcgccgccccccctccgaccccggc 28126638



to top

>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   ccgccgaccccggcagcgccggcc 149
             ||||||| ||||||||||||||||
Sbjct: 52774 ccgccgatcccggcagcgccggcc 52751



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 129     ccgaccccggcagcgccggccgag 152
               |||||||||||||||| |||||||
Sbjct: 1168096 ccgaccccggcagcgctggccgag 1168119



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 104     cgaggagaccgtcgccgcg 122
               |||||||||||||||||||
Sbjct: 6992736 cgaggagaccgtcgccgcg 6992718



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 125     cccgccgaccccggcagcg 143
               |||||||||||||||||||
Sbjct: 1402310 cccgccgaccccggcagcg 1402292



to top

>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0445E10
          Length = 145912

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 112   ccgtcgccgcgcccccgccgaccccggc 139
             |||||||||| ||||| |||||||||||
Sbjct: 10659 ccgtcgccgccccccctccgaccccggc 10632



to top

>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0019E03
          Length = 152092

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 112    ccgtcgccgcgcccccgccgaccccggc 139
              |||||||||| ||||| |||||||||||
Sbjct: 141864 ccgtcgccgccccccctccgaccccggc 141837



to top

>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1006_A02
          Length = 175153

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    gcgccccgccgctgtccgcg 173
              ||||||||||||||||||||
Sbjct: 145284 gcgccccgccgctgtccgcg 145303



to top

>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome
          Length = 12825

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 cgaggagaccgtcgccgcgc 123
           ||||||||||||||||||||
Sbjct: 509 cgaggagaccgtcgccgcgc 490



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     cgaggagaccgtcgccgcgc 123
               ||||||||||||||||||||
Sbjct: 2858007 cgaggagaccgtcgccgcgc 2857988



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    gccggccgagggcgccccgccgct 166
              |||||||||||||| |||||||||
Sbjct: 591050 gccggccgagggcggcccgccgct 591027



to top

>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete
              sequence
          Length = 158903

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 133    ccccggcagcgccggccgagggcg 156
              |||||||||||||| |||||||||
Sbjct: 140540 ccccggcagcgccgtccgagggcg 140563



to top

>dbj|D45382.2|STMAFSK1 Streptomyces coelicolor genes for KbpA, afsK, orfB and afsS, complete
            cds
          Length = 8199

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ccgtcgccgcgcccccgccg 131
            ||||||||||||||||||||
Sbjct: 2641 ccgtcgccgcgcccccgccg 2660



to top

>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1,
             aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds
          Length = 64957

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   ccgaccccggcagcgccggccgag 152
             |||||||||||||||| |||||||
Sbjct: 30380 ccgaccccggcagcgctggccgag 30403



to top

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 143     gccggccgagggcgccccgccgc 165
               |||||||||||||||| ||||||
Sbjct: 2552826 gccggccgagggcgccgcgccgc 2552804



to top

>ref|XM_514029.1| PREDICTED: Pan troglodytes LOC457552 (LOC457552), mRNA
          Length = 3942

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 ccgcgcccccgccgacccc 136
           |||||||||||||||||||
Sbjct: 231 ccgcgcccccgccgacccc 213



to top

>ref|NM_007314.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2
           (arg, Abelson-related gene) (ABL2), transcript variant
           b, mRNA
          Length = 3849

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 ccgcgcccccgccgacccc 136
           |||||||||||||||||||
Sbjct: 186 ccgcgcccccgccgacccc 168



to top

>ref|XM_585702.2| PREDICTED: Bos taurus similar to Zinc finger and BTB domain
            containing protein 20 (Zinc finger protein 288)
            (Dendritic-derived BTB/POZ zinc finger protein)
            (LOC508864), mRNA
          Length = 2474

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 144  ccggccgagggcgccccgc 162
            |||||||||||||||||||
Sbjct: 1090 ccggccgagggcgccccgc 1108



to top

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 112     ccgtcgccgcgcccccgcc 130
               |||||||||||||||||||
Sbjct: 1836982 ccgtcgccgcgcccccgcc 1837000



to top

>ref|XM_875030.1| PREDICTED: Bos taurus hypothetical protein LOC613865 (LOC613865),
           mRNA
          Length = 738

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 ccgcgcccccgccgacccc 136
           |||||||||||||||||||
Sbjct: 165 ccgcgcccccgccgacccc 147



to top

>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 117   gccgcgcccccgccgaccccggc 139
             |||||||||||||||||| ||||
Sbjct: 31928 gccgcgcccccgccgacctcggc 31950



to top

>ref|XM_854603.1| PREDICTED: Canis familiaris similar to tousled-like kinase 1,
           transcript variant 2 (LOC478795), mRNA
          Length = 2773

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 137 ggcagcgccggccgagggc 155
           |||||||||||||||||||
Sbjct: 149 ggcagcgccggccgagggc 131



to top

>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete
              sequence
          Length = 223982

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     gcagagaaccagaggggaa 50
              |||||||||||||||||||
Sbjct: 122183 gcagagaaccagaggggaa 122201



to top

>gb|AC125204.4| Mus musculus BAC clone RP23-237H8 from 10, complete sequence
          Length = 198473

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     gagagcagagaaccagagg 46
              |||||||||||||||||||
Sbjct: 120408 gagagcagagaaccagagg 120426



to top

>emb|AL512326.25| Human DNA sequence from clone RP11-345I18 on chromosome 1 Contains the 5'
              end of the ABL2 gene for v-abl Abelson murine leukemia
              viral oncogene homolog 2 (arg, Abelson-related gene), a
              ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR)
              pseudogene, a pseudogene similar to mouse SET
              translocation, a eukaryotic translation initiation factor
              4A, isoform 1 pseudogene, a UDP-Gal:betaGlcNAc beta
              1,3-galactosyltransferase, polypeptide 3 (B3GALT3)
              pseudogene, a cytochrome c oxidase subunit Vb (COX5B)
              pseudogene, the 5' end of the SOAT1 gene for sterol
              O-acyltransferase (acyl-Coenzyme A: cholesterol
              acyltransferase) 1, complete sequence
          Length = 187270

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 118    ccgcgcccccgccgacccc 136
              |||||||||||||||||||
Sbjct: 103828 ccgcgcccccgccgacccc 103846



to top

>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 167    gtccgcggagccgccggcc 185
              |||||||||||||||||||
Sbjct: 174764 gtccgcggagccgccggcc 174782



to top

>emb|AL356119.31| Human DNA sequence from clone RP5-856H7 on chromosome 6 Contains the 5'
             part of the alternatively spliced gene for the human
             orthologs of mouse QKI-7 and QKI-7B (KH Domain RNA Binding
             proteins) and zebrafish ZKQ-1 (Quaking protein homolog)
             and a CpG island, complete sequence
          Length = 75152

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 141   gcgccggccgagggcgccc 159
             |||||||||||||||||||
Sbjct: 22771 gcgccggccgagggcgccc 22789



to top

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 178     cgccggccagcgccgacgc 196
               |||||||||||||||||||
Sbjct: 2638521 cgccggccagcgccgacgc 2638503



to top

>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
             sequence
          Length = 148611

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 154   gcgccccgccgctgtccgc 172
             |||||||||||||||||||
Sbjct: 66073 gcgccccgccgctgtccgc 66091



to top

>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
              sequence
          Length = 132900

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 154    gcgccccgccgctgtccgc 172
              |||||||||||||||||||
Sbjct: 124374 gcgccccgccgctgtccgc 124392



to top

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 112     ccgtcgccgcgcccccgccgacc 134
               |||||||||||||||||| ||||
Sbjct: 2996913 ccgtcgccgcgcccccgcagacc 2996935



to top

>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                 
Query: 116    cgccgcgcccccgccgaccccggcagcgccggccg 150
              |||||||||||||| | ||||||| ||||| ||||
Sbjct: 172078 cgccgcgcccccgcggcccccggccgcgcccgccg 172044



to top

>gb|AE005752.1| Caulobacter crescentus CB15 section 78 of 359 of the complete genome
          Length = 10737

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 141  gcgccggccgagggcgccc 159
            |||||||||||||||||||
Sbjct: 5647 gcgccggccgagggcgccc 5629



to top

>emb|CR601496.1| full-length cDNA clone CS0DI062YF05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 891

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 141 gcgccggccgagggcgccc 159
           |||||||||||||||||||
Sbjct: 262 gcgccggccgagggcgccc 244



to top

>emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 in linkage group 3,
              complete sequence
          Length = 145520

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 59     tacctttcctgtagctccgtttgctcc 85
              ||||||||||||| |||| ||||||||
Sbjct: 122983 tacctttcctgtatctccttttgctcc 122957



to top

>gb|AY965678.1| Eptatretus burgeri nonfunctional variable lymphocyte receptor A (VLRA)
             gene, complete sequence
          Length = 43362

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    gctccgtttgctccgtccatggc 94
             ||||||| |||||||||||||||
Sbjct: 20439 gctccgtgtgctccgtccatggc 20417



to top

>ref|XM_945487.1| PREDICTED: Homo sapiens hypothetical protein LOC652427 (LOC652427),
            mRNA
          Length = 1759

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 141  gcgccggccgagggcgccc 159
            |||||||||||||||||||
Sbjct: 1353 gcgccggccgagggcgccc 1371



to top

>ref|XM_931426.1| PREDICTED: Homo sapiens hypothetical protein LOC643234 (LOC643234),
            mRNA
          Length = 1684

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 141  gcgccggccgagggcgccc 159
            |||||||||||||||||||
Sbjct: 1353 gcgccggccgagggcgccc 1371



to top

>gb|DQ385561.1| Cyperus ustulatus voucher AK286797 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 713

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cgaggagaccgtcgccgcg 122
           |||||||||||||||||||
Sbjct: 625 cgaggagaccgtcgccgcg 643



to top

>gb|DQ385560.1| Cyperus insularis voucher CHR569767 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 713

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cgaggagaccgtcgccgcg 122
           |||||||||||||||||||
Sbjct: 625 cgaggagaccgtcgccgcg 643



to top

>gb|DQ385559.1| Cyperus insularis voucher CHR569890 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 713

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cgaggagaccgtcgccgcg 122
           |||||||||||||||||||
Sbjct: 625 cgaggagaccgtcgccgcg 643



to top

>gb|DQ385558.1| Cyperus ustulatus voucher AK288573 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 713

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cgaggagaccgtcgccgcg 122
           |||||||||||||||||||
Sbjct: 625 cgaggagaccgtcgccgcg 643



to top

>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
             complete sequence
          Length = 55972

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 109   agaccgtcgccgcgcccccgccg 131
             |||||| ||||||||||||||||
Sbjct: 44913 agaccgccgccgcgcccccgccg 44935



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 154      gcgccccgccgctgtccgc 172
                |||||||||||||||||||
Sbjct: 20042117 gcgccccgccgctgtccgc 20042099



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                               
Query: 141      gcgccggccgagggcgccccgccgctgtccg 171
                |||||||||| | || |||||||||||||||
Sbjct: 10936244 gcgccggccgcgagctccccgccgctgtccg 10936274



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 117      gccgcgcccccgccgaccccggc 139
                |||||||||||||||||| ||||
Sbjct: 22442521 gccgcgcccccgccgacctcggc 22442543



to top

>gb|DQ009672.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2
            (arg, Abelson-related gene) (ABL2) gene, complete cds
          Length = 125255

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 118  ccgcgcccccgccgacccc 136
            |||||||||||||||||||
Sbjct: 1495 ccgcgcccccgccgacccc 1477



to top

>gb|AC087241.11| Homo sapiens 12 BAC RP11-268P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146000

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 174   gagccgccggccagcgccg 192
             |||||||||||||||||||
Sbjct: 34825 gagccgccggccagcgccg 34843



to top

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 110     gaccgtcgccgcgcccccgccga 132
               ||||||||||||||| |||||||
Sbjct: 2365606 gaccgtcgccgcgccgccgccga 2365584



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 172     cggagccgccggccagcgc 190
               |||||||||||||||||||
Sbjct: 5027573 cggagccgccggccagcgc 5027591



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 113     cgtcgccgcgcccccgccg 131
               |||||||||||||||||||
Sbjct: 1904826 cgtcgccgcgcccccgccg 1904844



to top

>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0028O21
          Length = 134543

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 141    gcgccggccgagggcgccccgccgctgtccg 171
              |||||||||| | || |||||||||||||||
Sbjct: 112619 gcgccggccgcgagctccccgccgctgtccg 112649



to top

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 116     cgccgcgcccccgccgacc 134
               |||||||||||||||||||
Sbjct: 2581511 cgccgcgcccccgccgacc 2581529



to top

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              ||||||| |||||||||||||||
Sbjct: 151335 cgccgcggccccgccgaccccgg 151357



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 116    cgccgcgcccccgccgaccccgg 138
              ||||||| |||||||||||||||
Sbjct: 131968 cgccgcggccccgccgaccccgg 131946



to top

>gb|AY104742.1| Zea mays PCO152525 mRNA sequence
          Length = 1163

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 58/71 (81%)
 Strand = Plus / Plus

                                                                       
Query: 88  ccatggccgatccagccgaggagaccgtcgccgcgcccccgccgaccccggcagcgccgg 147
           ||||||||||||| || ||||||| ||| | | |||| || |||||||| || || || |
Sbjct: 93  ccatggccgatccggcggaggagaacgttgtctcgccgccaccgacccctgcggccccag 152

                      
Query: 148 ccgagggcgcc 158
           ||| |||||||
Sbjct: 153 ccgtgggcgcc 163



to top

>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197369

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 54     gtgcttacctttcctgtagctcc 76
              |||||||||||||||| ||||||
Sbjct: 146904 gtgcttacctttcctggagctcc 146926



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 115     tcgccgcgcccccgccgac 133
               |||||||||||||||||||
Sbjct: 1873974 tcgccgcgcccccgccgac 1873956



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 178    cgccggccagcgccgacgc 196
              |||||||||||||||||||
Sbjct: 401602 cgccggccagcgccgacgc 401584



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 117     gccgcgcccccgccgaccccggc 139
               |||||||||||||| ||||||||
Sbjct: 1066675 gccgcgcccccgcccaccccggc 1066653



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 154      gcgccccgccgctgtccgc 172
                |||||||||||||||||||
Sbjct: 20053393 gcgccccgccgctgtccgc 20053375



to top

>gb|U22416.1|CRU22416 Chlamydomonas reinhardtii superoxide dismutase precursor gene,
            complete cds
          Length = 3097

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 117  gccgcgcccccgccgaccc 135
            |||||||||||||||||||
Sbjct: 1283 gccgcgcccccgccgaccc 1301



to top

>gb|M35296.1|HUMARGCAA Human tyrosine kinase arg gene mRNA
          Length = 3849

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 118 ccgcgcccccgccgacccc 136
           |||||||||||||||||||
Sbjct: 186 ccgcgcccccgccgacccc 168


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,172,097
Number of Sequences: 3902068
Number of extensions: 1172097
Number of successful extensions: 96474
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91444
Number of HSP's gapped (non-prelim): 5030
length of query: 196
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 174
effective length of database: 17,147,199,772
effective search space: 2983612760328
effective search space used: 2983612760328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top