| Clone Name | bast64h12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 102 gccgaggagaccgtcgccgcgcccccgccgaccccggc 139 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 17618903 gccgaggagaccgtccccgcgccgccgccaaccccggc 17618940
>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0564B04 Length = 64684 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 102 gccgaggagaccgtcgccgcgcccccgccgaccccggc 139 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 45251 gccgaggagaccgtccccgcgccgccgccaaccccggc 45288
>dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051P18, full insert sequence Length = 1147 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 102 gccgaggagaccgtcgccgcgcccccgccgaccccggc 139 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 73 gccgaggagaccgtccccgcgccgccgccaaccccggc 110
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 46.1 bits (23), Expect = 0.040 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||||||||||||||||||| Sbjct: 145586 cgccgcgcccccgccgaccccgg 145608 Score = 46.1 bits (23), Expect = 0.040 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||||||||||||||||||| Sbjct: 128423 cgccgcgcccccgccgaccccgg 128401
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 46.1 bits (23), Expect = 0.040 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||||||||||||||||||| Sbjct: 151418 cgccgcgcccccgccgaccccgg 151440 Score = 46.1 bits (23), Expect = 0.040 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||||||||||||||||||| Sbjct: 131006 cgccgcgcccccgccgaccccgg 130984
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.040 Identities = 23/23 (100%) Strand = Plus / Minus Query: 143 gccggccgagggcgccccgccgc 165 ||||||||||||||||||||||| Sbjct: 1585317 gccggccgagggcgccccgccgc 1585295
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 cgcccccgccgaccccggcagcgccg 146 |||||||| ||||||||||||||||| Sbjct: 17988729 cgcccccggcgaccccggcagcgccg 17988754
>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete sequence Length = 131589 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 121 cgcccccgccgaccccggcagcgccg 146 |||||||| ||||||||||||||||| Sbjct: 127472 cgcccccggcgaccccggcagcgccg 127447
>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete sequence Length = 142896 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 121 cgcccccgccgaccccggcagcgccg 146 |||||||| ||||||||||||||||| Sbjct: 33563 cgcccccggcgaccccggcagcgccg 33538
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 cgcccccgccgaccccggcagcgccg 146 |||||||| ||||||||||||||||| Sbjct: 17982270 cgcccccggcgaccccggcagcgccg 17982295
>ref|XM_233542.3| PREDICTED: Rattus norvegicus procollagen, type VIII, alpha 2 (predicted) (Col8a2_predicted), mRNA Length = 4583 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 ccccgccgctgtccgcggagccgccg 182 ||||||||||| |||||||||||||| Sbjct: 1012 ccccgccgctgcccgcggagccgccg 1037
>gb|BC080762.1| Mus musculus TBC1 domain family, member 4, mRNA (cDNA clone IMAGE:5351629), partial cds Length = 2693 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 663 gcgcccccgccgaccccggca 643
>ref|XM_619279.3| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 2 (Tbc1d4), mRNA Length = 3493 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_919007.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 7 (Tbc1d4), mRNA Length = 3861 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_919062.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 12 (Tbc1d4), mRNA Length = 6675 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_919002.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 6 (Tbc1d4), mRNA Length = 6672 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_919052.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 11 (Tbc1d4), mRNA Length = 6861 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_904849.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 5 (Tbc1d4), mRNA Length = 6864 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_973368.1| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 1 (Tbc1d4), mRNA Length = 6876 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>ref|XM_884420.2| PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 3 (Tbc1d4), mRNA Length = 6876 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1076 gcgcccccgccgaccccggca 1056
>gb|BC064433.1| Mus musculus TBC1 domain family, member 4, mRNA (cDNA clone IMAGE:4980904), partial cds Length = 2696 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 669 gcgcccccgccgaccccggca 649
>emb|BX047060.1|CNS098H4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 847 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ccccggcagcgccggccgagg 153 ||||||||||||||||||||| Sbjct: 616 ccccggcagcgccggccgagg 596
>emb|BX047059.1|CNS098H3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 852 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ccccggcagcgccggccgagg 153 ||||||||||||||||||||| Sbjct: 200 ccccggcagcgccggccgagg 220
>dbj|AK039337.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330026C01 product:hypothetical Phosphotyrosine interaction (PID or PI) containing protein, full insert sequence Length = 3251 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 1046 gcgcccccgccgaccccggca 1026
>dbj|AK044719.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930035N22 product:hypothetical Phosphotyrosine interaction (PID or PI) containing protein, full insert sequence Length = 3104 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 687 gcgcccccgccgaccccggca 667
>dbj|AK031120.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930406J04 product:hypothetical Phosphotyrosine interaction (PID or PI) containing protein, full insert sequence Length = 2901 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gcgcccccgccgaccccggca 140 ||||||||||||||||||||| Sbjct: 889 gcgcccccgccgaccccggca 869
>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds Length = 615 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 atggccgatccagccgagga 109 |||||||||||||||||||| Sbjct: 1 atggccgatccagccgagga 20
>ref|NM_192062.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 ccgtcgccgcgcccccgccgaccccggc 139 |||||||||| ||||| ||||||||||| Sbjct: 230 ccgtcgccgccccccctccgaccccggc 203
>ref|XM_362098.1| Magnaporthe grisea 70-15 hypothetical protein (MG04543.4) partial cds Length = 1350 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 aggagaccgtcgccgcgccc 125 |||||||||||||||||||| Sbjct: 257 aggagaccgtcgccgcgccc 276
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ccccggcagcgccggccgag 152 |||||||||||||||||||| Sbjct: 1160615 ccccggcagcgccggccgag 1160596
>ref|XM_870740.1| PREDICTED: Bos taurus similar to Interferon regulatory factor 4 (IRF-4) (Lymphocyte specific interferon regulatory factor) (LSIRF) (NF-EM5) (Multiple myeloma oncogene 1) (LOC618409), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggagccgccggccagcgcc 191 |||||||||||||||||||| Sbjct: 1085 cggagccgccggccagcgcc 1104
>ref|XM_533365.2| PREDICTED: Canis familiaris similar to RNA polymerase II subunit A C-terminal domain phosphatase (TFIIF-associating CTD phosphatase), transcript variant 1 (LOC476158), mRNA Length = 2802 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ctgtccgcggagccgccggccagc 188 |||||||||||||| ||||||||| Sbjct: 1574 ctgtccgcggagccaccggccagc 1551
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgtcgccgcgcccccgccg 131 |||||||||||||||||||| Sbjct: 11001 ccgtcgccgcgcccccgccg 11020
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcgccccgccgctgtccgcg 173 |||||||||||||||||||| Sbjct: 6179802 gcgccccgccgctgtccgcg 6179821
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 ccgtcgccgcgcccccgccgaccccggc 139 |||||||||| ||||| ||||||||||| Sbjct: 28126665 ccgtcgccgccccccctccgaccccggc 28126638
>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence Length = 94287 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ccgccgaccccggcagcgccggcc 149 ||||||| |||||||||||||||| Sbjct: 52774 ccgccgatcccggcagcgccggcc 52751
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ccgaccccggcagcgccggccgag 152 |||||||||||||||| ||||||| Sbjct: 1168096 ccgaccccggcagcgctggccgag 1168119 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 cgaggagaccgtcgccgcg 122 ||||||||||||||||||| Sbjct: 6992736 cgaggagaccgtcgccgcg 6992718 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 125 cccgccgaccccggcagcg 143 ||||||||||||||||||| Sbjct: 1402310 cccgccgaccccggcagcg 1402292
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 ccgtcgccgcgcccccgccgaccccggc 139 |||||||||| ||||| ||||||||||| Sbjct: 10659 ccgtcgccgccccccctccgaccccggc 10632
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 ccgtcgccgcgcccccgccgaccccggc 139 |||||||||| ||||| ||||||||||| Sbjct: 141864 ccgtcgccgccccccctccgaccccggc 141837
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 gcgccccgccgctgtccgcg 173 |||||||||||||||||||| Sbjct: 145284 gcgccccgccgctgtccgcg 145303
>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome Length = 12825 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cgaggagaccgtcgccgcgc 123 |||||||||||||||||||| Sbjct: 509 cgaggagaccgtcgccgcgc 490
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cgaggagaccgtcgccgcgc 123 |||||||||||||||||||| Sbjct: 2858007 cgaggagaccgtcgccgcgc 2857988
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gccggccgagggcgccccgccgct 166 |||||||||||||| ||||||||| Sbjct: 591050 gccggccgagggcggcccgccgct 591027
>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete sequence Length = 158903 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ccccggcagcgccggccgagggcg 156 |||||||||||||| ||||||||| Sbjct: 140540 ccccggcagcgccgtccgagggcg 140563
>dbj|D45382.2|STMAFSK1 Streptomyces coelicolor genes for KbpA, afsK, orfB and afsS, complete cds Length = 8199 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgtcgccgcgcccccgccg 131 |||||||||||||||||||| Sbjct: 2641 ccgtcgccgcgcccccgccg 2660
>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1, aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds Length = 64957 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ccgaccccggcagcgccggccgag 152 |||||||||||||||| ||||||| Sbjct: 30380 ccgaccccggcagcgctggccgag 30403
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 143 gccggccgagggcgccccgccgc 165 |||||||||||||||| |||||| Sbjct: 2552826 gccggccgagggcgccgcgccgc 2552804
>ref|XM_514029.1| PREDICTED: Pan troglodytes LOC457552 (LOC457552), mRNA Length = 3942 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 231 ccgcgcccccgccgacccc 213
>ref|NM_007314.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) (ABL2), transcript variant b, mRNA Length = 3849 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 186 ccgcgcccccgccgacccc 168
>ref|XM_585702.2| PREDICTED: Bos taurus similar to Zinc finger and BTB domain containing protein 20 (Zinc finger protein 288) (Dendritic-derived BTB/POZ zinc finger protein) (LOC508864), mRNA Length = 2474 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 ccggccgagggcgccccgc 162 ||||||||||||||||||| Sbjct: 1090 ccggccgagggcgccccgc 1108
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 ccgtcgccgcgcccccgcc 130 ||||||||||||||||||| Sbjct: 1836982 ccgtcgccgcgcccccgcc 1837000
>ref|XM_875030.1| PREDICTED: Bos taurus hypothetical protein LOC613865 (LOC613865), mRNA Length = 738 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 165 ccgcgcccccgccgacccc 147
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 117 gccgcgcccccgccgaccccggc 139 |||||||||||||||||| |||| Sbjct: 31928 gccgcgcccccgccgacctcggc 31950
>ref|XM_854603.1| PREDICTED: Canis familiaris similar to tousled-like kinase 1, transcript variant 2 (LOC478795), mRNA Length = 2773 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 ggcagcgccggccgagggc 155 ||||||||||||||||||| Sbjct: 149 ggcagcgccggccgagggc 131
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 gcagagaaccagaggggaa 50 ||||||||||||||||||| Sbjct: 122183 gcagagaaccagaggggaa 122201
>gb|AC125204.4| Mus musculus BAC clone RP23-237H8 from 10, complete sequence Length = 198473 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 gagagcagagaaccagagg 46 ||||||||||||||||||| Sbjct: 120408 gagagcagagaaccagagg 120426
>emb|AL512326.25| Human DNA sequence from clone RP11-345I18 on chromosome 1 Contains the 5' end of the ABL2 gene for v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene), a ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene, a pseudogene similar to mouse SET translocation, a eukaryotic translation initiation factor 4A, isoform 1 pseudogene, a UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 3 (B3GALT3) pseudogene, a cytochrome c oxidase subunit Vb (COX5B) pseudogene, the 5' end of the SOAT1 gene for sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1, complete sequence Length = 187270 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 103828 ccgcgcccccgccgacccc 103846
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 167 gtccgcggagccgccggcc 185 ||||||||||||||||||| Sbjct: 174764 gtccgcggagccgccggcc 174782
>emb|AL356119.31| Human DNA sequence from clone RP5-856H7 on chromosome 6 Contains the 5' part of the alternatively spliced gene for the human orthologs of mouse QKI-7 and QKI-7B (KH Domain RNA Binding proteins) and zebrafish ZKQ-1 (Quaking protein homolog) and a CpG island, complete sequence Length = 75152 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gcgccggccgagggcgccc 159 ||||||||||||||||||| Sbjct: 22771 gcgccggccgagggcgccc 22789
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 178 cgccggccagcgccgacgc 196 ||||||||||||||||||| Sbjct: 2638521 cgccggccagcgccgacgc 2638503
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 gcgccccgccgctgtccgc 172 ||||||||||||||||||| Sbjct: 66073 gcgccccgccgctgtccgc 66091
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 gcgccccgccgctgtccgc 172 ||||||||||||||||||| Sbjct: 124374 gcgccccgccgctgtccgc 124392
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 112 ccgtcgccgcgcccccgccgacc 134 |||||||||||||||||| |||| Sbjct: 2996913 ccgtcgccgcgcccccgcagacc 2996935
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 38.2 bits (19), Expect = 9.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 116 cgccgcgcccccgccgaccccggcagcgccggccg 150 |||||||||||||| | ||||||| ||||| |||| Sbjct: 172078 cgccgcgcccccgcggcccccggccgcgcccgccg 172044
>gb|AE005752.1| Caulobacter crescentus CB15 section 78 of 359 of the complete genome Length = 10737 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcgccggccgagggcgccc 159 ||||||||||||||||||| Sbjct: 5647 gcgccggccgagggcgccc 5629
>emb|CR601496.1| full-length cDNA clone CS0DI062YF05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 891 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcgccggccgagggcgccc 159 ||||||||||||||||||| Sbjct: 262 gcgccggccgagggcgccc 244
>emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 in linkage group 3, complete sequence Length = 145520 Score = 38.2 bits (19), Expect = 9.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 59 tacctttcctgtagctccgtttgctcc 85 ||||||||||||| |||| |||||||| Sbjct: 122983 tacctttcctgtatctccttttgctcc 122957
>gb|AY965678.1| Eptatretus burgeri nonfunctional variable lymphocyte receptor A (VLRA) gene, complete sequence Length = 43362 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 gctccgtttgctccgtccatggc 94 ||||||| ||||||||||||||| Sbjct: 20439 gctccgtgtgctccgtccatggc 20417
>ref|XM_945487.1| PREDICTED: Homo sapiens hypothetical protein LOC652427 (LOC652427), mRNA Length = 1759 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gcgccggccgagggcgccc 159 ||||||||||||||||||| Sbjct: 1353 gcgccggccgagggcgccc 1371
>ref|XM_931426.1| PREDICTED: Homo sapiens hypothetical protein LOC643234 (LOC643234), mRNA Length = 1684 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gcgccggccgagggcgccc 159 ||||||||||||||||||| Sbjct: 1353 gcgccggccgagggcgccc 1371
>gb|DQ385561.1| Cyperus ustulatus voucher AK286797 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 713 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 cgaggagaccgtcgccgcg 122 ||||||||||||||||||| Sbjct: 625 cgaggagaccgtcgccgcg 643
>gb|DQ385560.1| Cyperus insularis voucher CHR569767 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 713 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 cgaggagaccgtcgccgcg 122 ||||||||||||||||||| Sbjct: 625 cgaggagaccgtcgccgcg 643
>gb|DQ385559.1| Cyperus insularis voucher CHR569890 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 713 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 cgaggagaccgtcgccgcg 122 ||||||||||||||||||| Sbjct: 625 cgaggagaccgtcgccgcg 643
>gb|DQ385558.1| Cyperus ustulatus voucher AK288573 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 713 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 cgaggagaccgtcgccgcg 122 ||||||||||||||||||| Sbjct: 625 cgaggagaccgtcgccgcg 643
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster, complete sequence Length = 55972 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 109 agaccgtcgccgcgcccccgccg 131 |||||| |||||||||||||||| Sbjct: 44913 agaccgccgccgcgcccccgccg 44935
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 gcgccccgccgctgtccgc 172 ||||||||||||||||||| Sbjct: 20042117 gcgccccgccgctgtccgc 20042099
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 141 gcgccggccgagggcgccccgccgctgtccg 171 |||||||||| | || ||||||||||||||| Sbjct: 10936244 gcgccggccgcgagctccccgccgctgtccg 10936274
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 117 gccgcgcccccgccgaccccggc 139 |||||||||||||||||| |||| Sbjct: 22442521 gccgcgcccccgccgacctcggc 22442543
>gb|DQ009672.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) (ABL2) gene, complete cds Length = 125255 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 1495 ccgcgcccccgccgacccc 1477
>gb|AC087241.11| Homo sapiens 12 BAC RP11-268P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146000 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 174 gagccgccggccagcgccg 192 ||||||||||||||||||| Sbjct: 34825 gagccgccggccagcgccg 34843
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 gaccgtcgccgcgcccccgccga 132 ||||||||||||||| ||||||| Sbjct: 2365606 gaccgtcgccgcgccgccgccga 2365584
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 cggagccgccggccagcgc 190 ||||||||||||||||||| Sbjct: 5027573 cggagccgccggccagcgc 5027591 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 113 cgtcgccgcgcccccgccg 131 ||||||||||||||||||| Sbjct: 1904826 cgtcgccgcgcccccgccg 1904844
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 141 gcgccggccgagggcgccccgccgctgtccg 171 |||||||||| | || ||||||||||||||| Sbjct: 112619 gcgccggccgcgagctccccgccgctgtccg 112649
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 116 cgccgcgcccccgccgacc 134 ||||||||||||||||||| Sbjct: 2581511 cgccgcgcccccgccgacc 2581529
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||| ||||||||||||||| Sbjct: 151335 cgccgcggccccgccgaccccgg 151357 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 116 cgccgcgcccccgccgaccccgg 138 ||||||| ||||||||||||||| Sbjct: 131968 cgccgcggccccgccgaccccgg 131946
>gb|AY104742.1| Zea mays PCO152525 mRNA sequence Length = 1163 Score = 38.2 bits (19), Expect = 9.7 Identities = 58/71 (81%) Strand = Plus / Plus Query: 88 ccatggccgatccagccgaggagaccgtcgccgcgcccccgccgaccccggcagcgccgg 147 ||||||||||||| || ||||||| ||| | | |||| || |||||||| || || || | Sbjct: 93 ccatggccgatccggcggaggagaacgttgtctcgccgccaccgacccctgcggccccag 152 Query: 148 ccgagggcgcc 158 ||| ||||||| Sbjct: 153 ccgtgggcgcc 163
>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197369 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 gtgcttacctttcctgtagctcc 76 |||||||||||||||| |||||| Sbjct: 146904 gtgcttacctttcctggagctcc 146926
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 115 tcgccgcgcccccgccgac 133 ||||||||||||||||||| Sbjct: 1873974 tcgccgcgcccccgccgac 1873956
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 178 cgccggccagcgccgacgc 196 ||||||||||||||||||| Sbjct: 401602 cgccggccagcgccgacgc 401584
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 117 gccgcgcccccgccgaccccggc 139 |||||||||||||| |||||||| Sbjct: 1066675 gccgcgcccccgcccaccccggc 1066653
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 gcgccccgccgctgtccgc 172 ||||||||||||||||||| Sbjct: 20053393 gcgccccgccgctgtccgc 20053375
>gb|U22416.1|CRU22416 Chlamydomonas reinhardtii superoxide dismutase precursor gene, complete cds Length = 3097 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgcgcccccgccgaccc 135 ||||||||||||||||||| Sbjct: 1283 gccgcgcccccgccgaccc 1301
>gb|M35296.1|HUMARGCAA Human tyrosine kinase arg gene mRNA Length = 3849 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 ccgcgcccccgccgacccc 136 ||||||||||||||||||| Sbjct: 186 ccgcgcccccgccgacccc 168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,172,097 Number of Sequences: 3902068 Number of extensions: 1172097 Number of successful extensions: 96474 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91444 Number of HSP's gapped (non-prelim): 5030 length of query: 196 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 174 effective length of database: 17,147,199,772 effective search space: 2983612760328 effective search space used: 2983612760328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)