ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64h07 |
|---|---|
| Clone Library Name | barley_pub |
>IF36_MOUSE (P60229) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Mammary tumor-associated protein INT-6) (Viral integration site protein INT-6) (MMTV integration site 6) Length = 445 Score = 103 bits (258), Expect = 2e-22 Identities = 51/134 (38%), Positives = 87/134 (64%), Gaps = 2/134 (1%) Frame = +3 Query: 87 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKS 266 MAE+DLT +A ++D HLV P+LEFL + +Y ++E+L+GK+ LL TNMVD+AMD++K+ Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60 Query: 267 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA--DXQYNLHMLQE 440 L+ +D++P + +R+ VV +L+ LQ PIV P+ +++ + D + L + Sbjct: 61 LY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD 119 Query: 441 RHHIGPDQIEALYR 482 +H + ++ LYR Sbjct: 120 KHGFRQEYLDTLYR 133
>IF36_HUMAN (P60228) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Viral integration site protein INT-6 homolog) Length = 445 Score = 103 bits (258), Expect = 2e-22 Identities = 51/134 (38%), Positives = 87/134 (64%), Gaps = 2/134 (1%) Frame = +3 Query: 87 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKS 266 MAE+DLT +A ++D HLV P+LEFL + +Y ++E+L+GK+ LL TNMVD+AMD++K+ Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60 Query: 267 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA--DXQYNLHMLQE 440 L+ +D++P + +R+ VV +L+ LQ PIV P+ +++ + D + L + Sbjct: 61 LY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD 119 Query: 441 RHHIGPDQIEALYR 482 +H + ++ LYR Sbjct: 120 KHGFRQEYLDTLYR 133
>IF36_SCHPO (O94513) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) Length = 501 Score = 90.9 bits (224), Expect = 2e-18 Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 3/133 (2%) Frame = +3 Query: 93 EHDLTASVAAWMDPHLVLPVLEFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKSLH 272 ++DL+ + +D HL+ P+LEFL R + +E+L+ K LL TNM DY ++ +LH Sbjct: 14 KYDLSQKIMQHLDRHLIFPLLEFLSLRQTHDPKELLQAKYDLLKDTNMTDYVANLWTNLH 73 Query: 273 G--TDEVPADMVA-RRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADXQYNLHMLQER 443 G TDE A+ A +R V++ L L+E V I+ L +P L+ L D NL LQE Sbjct: 74 GGHTDEDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQEH 133 Query: 444 HHIGPDQIEALYR 482 ++I P++I LY+ Sbjct: 134 YNITPERIAVLYK 146
>IF36_DROME (O77410) Probable eukaryotic translation initiation factor 3| subunit 6 (eIF-3 p48) (eIF3e) Length = 435 Score = 79.3 bits (194), Expect = 5e-15 Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 2/134 (1%) Frame = +3 Query: 87 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKS 266 MA DLT ++D HL P+LEFL + +Y +E+L + + TNM+DY MD K Sbjct: 1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKR 60 Query: 267 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQ--ELHADXQYNLHMLQE 440 L+ + E+P ++V R++EV+ L+ LQ VAPI + + +++ E D + ++ LQ+ Sbjct: 61 LNLSQEMPEELVQRKAEVLATLKQLQNEVAPI---MKATDILKNGESMKDSKTFVNALQK 117 Query: 441 RHHIGPDQIEALYR 482 ++ + +E+ Y+ Sbjct: 118 DYNFKVEHLESAYK 131
>IF36_CAEEL (O61820) Probable eukaryotic translation initiation factor 3| subunit 6 (eIF-3 p48) (eIF3e) Length = 432 Score = 68.6 bits (166), Expect = 8e-12 Identities = 35/137 (25%), Positives = 76/137 (55%), Gaps = 5/137 (3%) Frame = +3 Query: 87 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKS 266 M+ DLT +A ++D HL++P+LEF++ RG+Y ++ + +LL TNM+D ++ + Sbjct: 1 MSTFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIETYNG 60 Query: 267 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADXQYN-----LHM 431 +PA + A++ ++++ L+ V +VA L P++ + + + + + L Sbjct: 61 ----KPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEH 116 Query: 432 LQERHHIGPDQIEALYR 482 L + H+ D ++ L++ Sbjct: 117 LTQNHNFTVDMVDTLFK 133
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 37.4 bits (85), Expect = 0.021 Identities = 21/42 (50%), Positives = 22/42 (52%) Frame = +2 Query: 80 DSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 D+ GG R G R G G P GP G P G RG RRG AG Sbjct: 246 DNFGGGRGRGGRHGGPGGPGGPGGPGGPRGGRG-GRRGGTAG 286
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 35.4 bits (80), Expect = 0.080 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNP 199 G A GERG G DG P P RAG P PGA GL +G+P Sbjct: 1290 GSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGL--KGSP 1328 Score = 31.2 bits (69), Expect = 1.5 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 11/52 (21%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGP--PSGPARAGVPPGARGLR-RRGNP 199 R G P GERG G+ GP P GP + PPGA GL+ +G+P Sbjct: 2412 RGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDP 2463
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 34.7 bits (78), Expect = 0.14 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPGARGLR-RRGNPAG 205 G + +G GV GPP G AG PPG +G++ RG+P G Sbjct: 831 GEKGEGGPPGVAGPPGGSGPAG-PPGPQGVKGERGSPGG 868 Score = 32.0 bits (71), Expect = 0.88 Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERGG--VDGPPSGPARAGVP-----PGARGLRRRGNPAG 205 GGA P G GG GPP P AG P PG RG P G Sbjct: 696 GGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKG 741 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 199 G A P G +G G G P GP AG PGARGL GNP Sbjct: 849 GPAGPPGPQGVKGERGSPGGPGAAGF-PGARGLPGPPGSNGNP 890 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 R + G A P G G G DG P GP G+P PG G + P G Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPG 555 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 92 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 178 GAR DG RG G GPP P AG P PGA+G Sbjct: 318 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 351 Score = 29.3 bits (64), Expect = 5.7 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 119 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 211 G GPP P +AG PPG G PAG+D Sbjct: 198 GYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKD 230
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 33.5 bits (75), Expect = 0.30 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 + GG P GE G G GP +GPA PPG G R G P G Sbjct: 738 KGERGGKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.5 bits (75), Expect = 0.30 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 89 GGARPDGERGG--VDGPPSGPARAGVPPGARGL-RRRGNPAG 205 GGA P G GG GPP P AG PG +G+ RG P G Sbjct: 540 GGAGPPGPEGGKGAAGPPGPPGSAGT-PGLQGMPGERGGPGG 580 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +2 Query: 83 SHGGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNPAGQ 208 S+G P G G G DGPP P G P PG G + P G+ Sbjct: 730 SNGNPGPPGSSGAPGKDGPPGPPGSNGAPGSPGISGPKGDSGPPGE 775 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPGARGLR-RRGNPAG 205 G + +G G GP G AG PPG +G++ RG+P G Sbjct: 675 GEKGEGGPPGAAGPAGGSGPAG-PPGPQGVKGERGSPGG 712 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 GG P G RG G +G P GP G+P PG G + P G Sbjct: 354 GGPGPAGPRGVAGEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPG 399 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 92 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 178 GAR DG RG G GPP P AG P PGA+G Sbjct: 162 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 195 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G + GERG G GPP GP PPG G + P G Sbjct: 519 GDSGAPGERGPPGAGGPP-GPRGGAGPPGPEGGKGAAGPPG 558
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 33.1 bits (74), Expect = 0.40 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPGARGLR-RRGNPAG 205 G + +G G GPP G AG PPG +G++ RG+P G Sbjct: 830 GEKGEGGPPGAAGPPGGSGPAG-PPGPQGVKGERGSPGG 867 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +2 Query: 89 GGARPDGERGGVDGP--PSGPARAGVPPGARGL-RRRGNP 199 GGA P G GG GP P GP PPG +G+ RG P Sbjct: 695 GGAGPPGPEGG-KGPAGPPGPPGTSGPPGLQGMPGERGGP 733 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 GG P G RG G DG P GP G+P PG G + P G Sbjct: 509 GGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPGGPGNDGKPGPPG 554 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 92 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 178 GAR DG RG G GPP P AG P PGA+G Sbjct: 317 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 350 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 199 G A P G +G G G P GP AG PG RGL GNP Sbjct: 848 GPAGPPGPQGVKGERGSPGGPGAAGF-PGGRGLPGPPGNNGNP 889 Score = 29.3 bits (64), Expect = 5.7 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 119 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 211 G GPP P +AG PPG G PAG+D Sbjct: 197 GYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKD 229 Score = 28.9 bits (63), Expect = 7.5 Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +2 Query: 83 SHGGARPDGERGGVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 S G P GE G DG P P GVP PG RG PAG Sbjct: 453 SPGIPGPKGE-DGKDGSPGEPGANGVPGNPGERGAPGFRGPAG 494
>FBRL_CANGA (Q6FN88) Fibrillarin| Length = 323 Score = 32.3 bits (72), Expect = 0.67 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 83 SHGGARPD-GERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 S GG+R G RGG G P G +R G GARG R G G Sbjct: 38 SRGGSRGGFGGRGGSRGGPRGGSRGGPRGGARGGARGGAKGG 79
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 32.0 bits (71), Expect = 0.88 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 77 RDSHGGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 R G A P GE R G GPP P G PPG G+ P+GQ Sbjct: 1713 RGPPGPAGPSGESRPGSPGPPGSPGPRG-PPGHLGVPGPQGPSGQ 1756 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 RD G R + G GPP P G+P PG G+ P G Sbjct: 1547 RDGSPGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGITGSMGPQG 1591
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 32.0 bits (71), Expect = 0.88 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 77 RDSHGGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 R G A P GE R G GPP P G PPG G+ P+GQ Sbjct: 1712 RGPPGPAGPSGESRPGSPGPPGSPGPRG-PPGHLGVPGPQGPSGQ 1755 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 RD G R + G GPP P G+P PG G+ P G Sbjct: 1546 RDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQG 1590
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 32.0 bits (71), Expect = 0.88 Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +2 Query: 89 GGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPA 202 GG P G RGG PP G RAG PPG RG+ G A Sbjct: 1072 GGPAPGGPGRGGA--PPPGAGRAG-PPGGRGMPAPGGAA 1107 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = +2 Query: 89 GGARPDGERG---GVDGPPSGPARAGVPPGARGLRRRGNP 199 GGA P G G GPP G PPG G+R RG P Sbjct: 1104 GGAAPRGRGAPPPGAGGPPGGGRGGAPPPG--GMRGRGGP 1141 Score = 30.4 bits (67), Expect = 2.6 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 GG P RGG P GP R G PP G R G P G+ Sbjct: 1063 GGPGPMRGRGGP--APGGPGRGGAPPPGAG--RAGPPGGR 1098
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +2 Query: 77 RDSHGGARPDGERGGV-DGPPSGPARAGVPPGARGLRRRGNP 199 R GG RP +GG GP G R G PG R +G P Sbjct: 197 RPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGP 238
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 195 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAG 240 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 150 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 195 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 123 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 168
>SYB_LOLPE (P47194) Synaptobrevin| Length = 125 Score = 31.2 bits (69), Expect = 1.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 101 PDGERGGVDGPPSGPARAGVPPG 169 P + G GPPSGP + G PPG Sbjct: 4 PQNPQAGPGGPPSGPPQPGGPPG 26
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 R++ GG DG+RGG +G G G P G G P G Sbjct: 204 RETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 246
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 77 RDSHGGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 R + G A P G G G+ GPP P +G+ PG G R P+G Sbjct: 99 RGALGPAGPPGPAGKGLPGPPGPPGPSGL-PGGNGFRGPPGPSG 141
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 150 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 195 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 105 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 150 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 +P G+R DG P+G AG P G R G R G PAG Sbjct: 219 QPAGDRA--DGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAG 258 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 +P G+R DG P+G AG P G R G R G PAG Sbjct: 201 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 240 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 +P G+R DG P+G AG P G R G R G PAG Sbjct: 183 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 222
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 784 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 G + P G++G G GP P GP PPG +G + P G Sbjct: 1510 GSSGPKGDQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1552 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 208 R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1392 RGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1448 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 178 G A P GERG G GPP P + G+P PG RG Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 982
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 30.8 bits (68), Expect = 2.0 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 89 GGARPDGERG-----GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G + P GE+G G GPP P G PPG +G + P G Sbjct: 1510 GSSGPKGEQGITGPSGPIGPPGPPGLPG-PPGPKGAKGSSGPTG 1552 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 784 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 208 R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1392 RGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1448 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 178 G A P GERG G GPP P + G+P PG RG Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 982
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 2.0 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 G A P G+RG G GPP P G P G G R PAG Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.8 bits (68), Expect = 2.0 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 G + P GE+G G GP P GP PPG +G + P G Sbjct: 1512 GSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1554 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 738 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 786 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 208 R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1394 RGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1450 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 178 G A P GERG G GPP P + G+P PG RG Sbjct: 942 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 984
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.8 bits (68), Expect = 2.0 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 G + P GE+G G GP P GP PPG +G + P G Sbjct: 1512 GSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1554 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 738 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 786 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 208 R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1394 RGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1450 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 89 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 178 G A P GERG G GPP P + G+P PG RG Sbjct: 942 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 984
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 125 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 170 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 92 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 80 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 125 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 +P G+R DG P+G AG P G R G R G PAG Sbjct: 176 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 215 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 205 +P G+R DG P+G AG P G R G R G PAG Sbjct: 158 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 197
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.8 bits (68), Expect = 2.0 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Frame = +2 Query: 89 GGARPDGERG-----GVDGPPSGPARAGVPPGARGLR-RRGNPAG 205 G P G RG G GP GP G PPG +G++ RG+P G Sbjct: 824 GERGPPGLRGEAGPPGAAGPQGGPGAPG-PPGPQGVKGERGSPGG 867 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 7/48 (14%) Frame = +2 Query: 83 SHGGARPDGERG--GVDGPPSGPARAGVP-----PGARGLRRRGNPAG 205 + GG P G G G GPP P G+P PG RG P G Sbjct: 693 ARGGPGPAGSEGAKGPPGPPGAPGGTGLPGLQGMPGERGASGSPGPKG 740 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVP-----PGARGLRRRGNPAG 205 G G RG G GPP R G P PG RG R PAG Sbjct: 932 GSPGASGARGPPGPAGPPGKDGRGGYPGPIGPPGPRGNRGESGPAG 977
>IGEB_MOUSE (P03975) IgE-binding protein| Length = 557 Score = 30.8 bits (68), Expect = 2.0 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 261 KSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA 407 K + G E +D VAR +E ER+ E AP++ L Q +E A Sbjct: 363 KIIQGPQESFSDFVARMTEAAERIFGESEQAAPLIEQLIYEQATKECRA 411
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPGARG 178 G PD E PSGP A PPGA G Sbjct: 23 GRAPDSEAARAAPTPSGPPAAAAPPGAPG 51
>FBRL_ASHGO (Q756P0) Fibrillarin| Length = 326 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 80 DSHGGARPD-GERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 DS GGAR G RGG G P G R G G RG R G G Sbjct: 43 DSRGGARGGFGGRGGSRGGPRGGPRGGA-RGGRGGARGGAKGG 84
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +2 Query: 83 SHGGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 199 S G A P G +G G G P GP AG PG RGL GNP Sbjct: 846 SSGPAGPPGPQGVKGERGSPGGPGTAGF-PGGRGLPGPPGNNGNP 889 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 205 GG P G RG G DG P GP G+P PG G + P G Sbjct: 509 GGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPGGPGNDGKPGPPG 554 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 83 SHGGARPDGERGGVDGP--PSGPARAGVPPGARGL-RRRGNP 199 + GGA P G GG GP P GP A PG +G+ RG P Sbjct: 693 ARGGAGPPGPEGG-KGPAGPPGPPGASGSPGLQGMPGERGGP 733 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 92 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 178 GAR DG RG G GPP P AG P PGA+G Sbjct: 317 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 350 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 119 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 211 G GPP P +AG PPG G PAG+D Sbjct: 197 GYQGPPGEPGQAGPAGPPGPPGALGPAGPAGKD 229
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGP--PSGPARAGVPPGARG 178 R G A P G R GVDGP P GP A PPG G Sbjct: 41 RGQRGPAGPRG-RDGVDGPVGPPGPPGAPGPPGPPG 75 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 G P GE G G GP +GP+ PPG G R G P G Sbjct: 748 GTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPG 790
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 80 DSHGGARPDGERGGVDGPPSGPARAGVPPGARG 178 D G R G++GG G PSG R G PG RG Sbjct: 334 DGRTGEREQGDQGGRRG-PSGGGRTGGRPGRRG 365
>GAG_IPMA (P11365) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 827 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 261 KSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA 407 K + G E +D VAR +E ER+ E AP++ L Q +E A Sbjct: 363 KVVQGPQESFSDFVARMTEAAERIFGESEQAAPLIEQLIYEQATKECRA 411
>GRASP_MOUSE (Q9JJA9) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) Length = 392 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPGARG 178 G PD E PSGP A PPGA G Sbjct: 23 GRAPDSEAARAAPLPSGPPAAAAPPGAPG 51
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 211 + S G P G RG G+ G P GPA PPG G G PAG D Sbjct: 747 KGSKGAPGPAGARGESGLAGAP-GPAGPPGPPGPPGPPGPGLPAGFD 792
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 205 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 976 GETGPIGERG-YPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024 Score = 29.6 bits (65), Expect = 4.4 Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 211 R S G A P G RG G GPP GPA PG +G + PAG+D Sbjct: 1062 RGSAGTAGPIGLRGRPGPQGPP-GPAGEKGAPGEKGPQ---GPAGRD 1104 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +2 Query: 83 SHGGARPDGERGGVDGP-PSGPARAGVPPGARGLRRRGNPAG 205 S GG GE G P P G A G P G RG + P G Sbjct: 1247 SVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPG 1288 Score = 28.5 bits (62), Expect = 9.7 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +2 Query: 92 GARPDGERGGVDGP--PSGPARAGVPPGARGLRRRGNPAGQ 208 GA+ DG G GP P GP P G +G + PAGQ Sbjct: 1483 GAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQ 1523
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 30.0 bits (66), Expect = 3.3 Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGVPPGARG--LRRRGNPAG 205 R GG RP G GG G P G AG P G G R G P G Sbjct: 328 RGPGGGGRPGGPGGG-GGRPGGGGFAGRPGGGGGGFAGRPGGPGG 371 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/39 (41%), Positives = 16/39 (41%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 GG P G G G P GP G PG G G P G Sbjct: 321 GGGGPGGRGPGGGGRPGGPGGGGGRPGGGGF--AGRPGG 357
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%) Frame = +2 Query: 107 GERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 GE+G G+ GPP P AG+ PPG +G G P G Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 388
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 RD GA+ D G GPP P G P G G R PAG Sbjct: 1015 RDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 RD GA+ D G GPP P G P G G R PAG Sbjct: 1015 RDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +2 Query: 89 GGARPDGERGGVDGP-PSGPARAGVPPGARG 178 G A P G G V P P GP A PPGA G Sbjct: 834 GPAGPPGPIGNVGAPGPKGPRGAAGPPGATG 864
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 77 RDSHGGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 R S G P G G G+ GPP G A PPG GLR P+G Sbjct: 103 RGSLGPPGPPGLGGKGLPGPP-GEAGVSGPPGGIGLRGPPGPSG 145
>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related| transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein) (Megacaryocytic acute leukemia protein) Length = 931 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +3 Query: 309 RSEVVERLRALQEAVAPIVAFLSSPQLVQELHADXQYNLHMLQERHHIGPDQIEA 473 ++E++ERLRA Q+ ++P+ +P LH + + R GP + A Sbjct: 370 KTELIERLRAYQDQISPVPGAPKAPAATSILHKAGEVVVAFPAARLSTGPALVAA 424
>EMID1_HUMAN (Q96A84) EMI domain-containing protein 1 precursor (Protein Emu1)| (Emilin and multimerin domain-containing protein 1) Length = 441 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGV--PPGARGLRRRGNPAG 205 G P G RG G GPP P RAG PG RG P G Sbjct: 212 GSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG 254
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 205 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 974 GETGPIGERGH-PGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1022
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G P+GE G PSGP PG+RGL PAG Sbjct: 379 GKRGPNGEAGSAG--PSGPPGLRGSPGSRGLPGADGPAG 415 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 + G P GE G G GP +GP+ PPG G R G P G Sbjct: 738 KGERGTKGPKGENGPVGPTGPIGSAGPSGPNGPPGPAGSRGDGGPPG 784 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 107 GERG--GVDGPP--SGPARAGVPPGARGLRRRGNPAGQD 211 GERG G GP +GPA A PGA+G R P G++ Sbjct: 712 GERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGEN 750
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 RD GA+ D G GPP P G P G G R PAG Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAG 1073
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%) Frame = +2 Query: 107 GERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 GE+G G+ GPP P AG+ PPG++G G P G Sbjct: 345 GEQGPQGLGGPPGLPGSAGLPGRRGPPGSKGEVGPGGPPG 384
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 +PDG GG P PA + VPP + +P+G Sbjct: 1191 QPDGAGGGGSSPSPAPATSPVPPSPSPVPTPASPSG 1226
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 77 RDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 R + G RP+G+R G P GP R G P G G P G Sbjct: 390 RPAGGAPRPEGQREGGYRPAGGPPRPGGAPRPGGF--GGAPGG 430
>VGLB_MCMVS (P27171) Glycoprotein B precursor| Length = 928 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = +2 Query: 101 PDGERGGVDGPPSGPARAGV---PPGARGLRRRGNPAGQD 211 P + V P G A G+ PPGA GL RR N G D Sbjct: 813 PYATQTAVQYAPPGGAHGGLESGPPGAPGLHRRVNAGGSD 852
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Frame = +2 Query: 83 SHGGARPDGERGGVDGPPSGP-----ARAGVPPGARGLRR---RGNP 199 SH G G RGG GPP P G PG RG R RG+P Sbjct: 702 SHHGGERGGMRGGDRGPPPPPFHRNRGGRGGEPGYRGRGRGGERGHP 748
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +2 Query: 92 GARPDGERGGVDGPPSG----PARAGVPPGARGLRRRGNPA 202 G P+G RGG PP G P R PP RRG+PA Sbjct: 354 GPGPNG-RGGYGPPPRGGYGPPMRGRAPPPGYQYDRRGSPA 393
>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = +2 Query: 89 GGARPDGERGGVD--GPPSGPARAGVPPGAR---GLRRRGNPAG 205 G R GE GG GPP G PP R GL G P+G Sbjct: 629 GSLRRGGEPGGTGDGGPPPSRGSTGAPPNLRALPGLHPYGAPSG 672
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 29.3 bits (64), Expect = 5.7 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 7/48 (14%) Frame = +2 Query: 89 GGARPDGE-----RGGVDGP--PSGPARAGVPPGARGLRRRGNPAGQD 211 G A PDG+ +GG GP P GPA PGA G GQ+ Sbjct: 149 GPAGPDGQPGADGQGGAPGPAGPEGPAGDAGAPGAPGAPGNDGQPGQN 196
>TAF6L_HUMAN (Q9Y6J9) TAF6-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65 alpha) (PAF65-alpha) Length = 622 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = +2 Query: 86 HGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 HG P G GG SGPA + P R R RG P Q Sbjct: 497 HGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQ 537
>ABC3G_MACMU (Q7YR23) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| (Fragment) Length = 370 Score = 29.3 bits (64), Expect = 5.7 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 454 PMWWRSWSMWRLYCXSAWSSCTSCGLE 374 P W +R+ C ++WS C SC E Sbjct: 260 PFWKLDGQQYRVTCFTSWSPCFSCAQE 286
>XKR7_RAT (Q5GH56) XK-related protein 7| Length = 580 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +2 Query: 92 GARPDGERGGVDGPPSGPARAGVPPG--ARGLRRRG 193 GA GER G PP R G+PP AR LR G Sbjct: 486 GAAVGGERAGTPTPPVFQVRPGLPPTPVARPLRTEG 521
>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (MAP2 RNA trans-acting protein 1) (MARTA1) Length = 721 Score = 29.3 bits (64), Expect = 5.7 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%) Frame = +2 Query: 128 GPPSGPARAGVPPGARGLRRR----GNPAGQ 208 GPP P G+PPG RG R G P G+ Sbjct: 397 GPPGPPGAPGMPPGGRGRGRGQGNWGPPGGE 427
>WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor| Length = 417 Score = 29.3 bits (64), Expect = 5.7 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +2 Query: 98 RPDGERGGVDGPPSGPARAGVP-PGARGLRRRGNPA 202 RP GG P GPA A P PGA G RRR +PA Sbjct: 301 RPHNRNGGQLEP--GPAGAPSPAPGAPGPRRRASPA 334
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 205 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 743 GETGPIGERGH-PGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDGPAG 791
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 13/56 (23%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGPPSGPARAGV-----------PPGARGLRRRGNPAG 205 R G A P G++G G G P P AG PPG+ G R PAG Sbjct: 442 RGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAG 497
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +2 Query: 86 HGGARPDGERGGVDGPPS--GPARAGVPPGARGLRRRGNPAG 205 H G++ D G G P GPA PPGA G + R P G Sbjct: 1086 HKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPG 1127 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = +2 Query: 104 DGERGGVDGPPSGPARAGVPPGARG-LRRRGNP 199 DGERG +GPP +AG PG RG L RG+P Sbjct: 580 DGERGA-EGPPGPTGQAG-EPGPRGLLGPRGSP 610
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 29.3 bits (64), Expect = 5.7 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = +2 Query: 77 RDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 + G P GE G G GP +GP+ PPG G R G P G Sbjct: 736 KGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPG 782 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 107 GERG--GVDGPP--SGPARAGVPPGARGLRRRGNPAGQD 211 GERG G GP +GPA A PGA+G R P G++ Sbjct: 710 GERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGEN 748
>ABC3G_PAPAN (Q694B7) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 383 Score = 29.3 bits (64), Expect = 5.7 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 454 PMWWRSWSMWRLYCXSAWSSCTSCGLE 374 P W +R+ C ++WS C SC E Sbjct: 267 PFWKLDGQQYRVTCFTSWSPCFSCAQE 293
>ABC3G_MACNG (Q694C4) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 383 Score = 29.3 bits (64), Expect = 5.7 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 454 PMWWRSWSMWRLYCXSAWSSCTSCGLE 374 P W +R+ C ++WS C SC E Sbjct: 267 PFWKLDGQQYRVTCFTSWSPCFSCAQE 293
>ABC3G_MACFA (Q694C2) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 384 Score = 29.3 bits (64), Expect = 5.7 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -2 Query: 454 PMWWRSWSMWRLYCXSAWSSCTSCGLE 374 P W +R+ C ++WS C SC E Sbjct: 268 PFWKLDGQQYRVTCFTSWSPCFSCAQE 294
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 89 GGARPDGERGGVDGPP--SGPARAGVPPGARG 178 G A DGE G GPP +GP A PPG RG Sbjct: 439 GDAGKDGETGAA-GPPGAAGPTGARGPPGPRG 469 Score = 28.9 bits (63), Expect = 7.5 Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +2 Query: 89 GGARPDGERGGVDGP-PSGPARAGVPPGARGLRRRGNPAG 205 G A GERG V PSGPA G GA G R P G Sbjct: 484 GEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRG 523
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Frame = +2 Query: 86 HGGARPD---GERGGVDGPPSGPARAGVPPGARGLRRRGNP 199 HG A P G GGV GP GP PP G+P Sbjct: 630 HGNAGPHMGHGHMGGVPGPGPGPGGMNGPPHPHMSPHHGHP 670
>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2327 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRR 190 GG R RGG G GP + G+PPG R L ++ Sbjct: 17 GGERA---RGGGAGGAGGPGQGGLPPGQRVLYKQ 47
>LRP1_HHV1F (P17588) Latency-related protein 1| Length = 340 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/41 (43%), Positives = 18/41 (43%) Frame = +2 Query: 83 SHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 S GG P G RGG P R G G RG RRG G Sbjct: 292 SGGGRGPGGGRGG---PRGSRGRGGRGRGGRGGGRRGRQGG 329
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 28.9 bits (63), Expect = 7.5 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%) Frame = +2 Query: 77 RDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 205 R S G G RG G DGP P+GP A PPG +G+ AG Sbjct: 638 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAG 690 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 107 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 GERG G +G P P G+P GARGL R AG Sbjct: 462 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 501
>CRSP2_HUMAN (O60244) CRSP complex subunit 2 (Cofactor required for Sp1| transcriptional activation subunit 2) (Transcriptional coactivator CRSP150) (Vitamin D3 receptor-interacting protein complex 150 kDa component) (DRIP150) (Thyroid hormone receptor-ass Length = 1454 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 80 DSHGGARPDGERGGVDGPPSGPARAGVPPGA 172 ++H P G GG GPPS PA PPGA Sbjct: 7 ENHQLVPPGGGGGGSGGPPSAPAPP--PPGA 35
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +2 Query: 95 ARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNP 199 +RP G GG + PP GP+ GVPPG G G P Sbjct: 250 SRPHG-MGGPNMPPPGPS--GVPPGMPGQPPGGPP 281
>GAG_IPHA (P04023) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 572 Score = 28.9 bits (63), Expect = 7.5 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +3 Query: 141 VLPVL-EFLQERGVYADEEILRGKIRLLGGTNMVDYAMDIHKSLHGTDEVPADMVARRSE 317 VLP + ++++ + ++ D + ++ G + + + K + G E +D VAR +E Sbjct: 316 VLPNMGQYMEWKALWYDAAQAQARVNATAGRS----SGHLTKIVQGPQEPFSDFVARMTE 371 Query: 318 VVERLRALQEAVAPIVAFLSSPQLVQELHA 407 R+ E P++ L Q QE A Sbjct: 372 AASRIFGDSEQAMPLIEQLVYEQATQECRA 401
>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2336 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRR 190 GG R RGG G GP + G+PPG R L ++ Sbjct: 17 GGERA---RGGGAGGAGGPGQGGLPPGQRVLYKQ 47
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Frame = +2 Query: 83 SHGGARPDGERG--GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 208 S GG G +G G +GPP GP PG GLR P G+ Sbjct: 46 SEGGQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGE 94
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 28.9 bits (63), Expect = 7.5 Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Frame = +2 Query: 86 HGGA--RPDGERGGVDGPPSGPARAGVPPG-ARGLRRRGNPAG 205 HGGA RPD G PSGP G P G G PAG Sbjct: 362 HGGAPGRPDTAGGAGSAHPSGPGGPGAAPSQGYGDGSAGAPAG 404
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 205 G P G+RG G GPP P G P G G R PAG Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1069
>YRF2_CAEEL (Q09578) Putative cuticle collagen K03H9.2| Length = 285 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +2 Query: 101 PDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 211 P G+ G G+DGPP P G PG RG+ G D Sbjct: 134 PKGKSGYKGIDGPPGIPGWPG-EPGVRGMNGERGSTGLD 171
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%) Frame = +2 Query: 89 GGARPDGERGGVDGP--PSGPARAGVPPGARGLRRRGNPAG 205 G P G G GP P GP G P G G G P G Sbjct: 401 GAGTPGGAGRGTGGPGGPGGPGGLGGPGGPGGTGGPGGPGG 441
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 GG P G G G GPP G R G +G++R P G Sbjct: 645 GGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHG 685
>KIF3B_HUMAN (O15066) Kinesin-like protein KIF3B (Microtubule plus end-directed| kinesin motor 3B) (HH0048) Length = 747 Score = 28.5 bits (62), Expect = 9.7 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 18/103 (17%) Frame = +3 Query: 192 EILRGKIR------LLGGTNMVDYAMDIHKSLHGTDEVPADMVARRSEVVERLRALQEAV 353 E+L KI+ L+GG N+VD+ + K L + A+ R E+ +++ + E Sbjct: 461 EMLGAKIKAMESKLLVGGKNIVDHTNEQQKILEQKRQEIAEQKRREREIQQQMESRDEET 520 Query: 354 APIVAFLSSPQ------------LVQELHADXQYNLHMLQERH 446 + SS Q L +L A + +H LQE H Sbjct: 521 LELKETYSSLQQEVDIKTKKLKKLFSKLQA-VKAEIHDLQEEH 562
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 28.5 bits (62), Expect = 9.7 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +2 Query: 89 GGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G G+RG G+ GP P G PPGA G GN G Sbjct: 193 GSPGKSGQRGRGLPGPSGAPGPQG-PPGAPGQPGSGNAPG 231
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 8/35 (22%) Frame = +2 Query: 89 GGARPDGERG--------GVDGPPSGPARAGVPPG 169 GG P G +G G DG P GP AG P G Sbjct: 241 GGPGPAGPKGPPGAAGAPGADGNPGGPGTAGKPGG 275
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 8/51 (15%) Frame = +2 Query: 77 RDSHGGARPDGERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 RD GA+ GERG G+ G P GPA + P G G R G P+G Sbjct: 929 RDGLPGAK--GERGYPGNTGPSGLAGAP-GPAGSAGPAGKSGNRGEGGPSG 976 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +2 Query: 89 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 205 G A G+RG + P+GP+ P GA G R PAG Sbjct: 676 GPAGGPGDRG--ESGPAGPSGVAGPRGAPGERGEAGPAG 712 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 101 PDGERGGVDGPPSGPARAGVPPGARG 178 PDG GG+ P+G + PPGARG Sbjct: 401 PDGRAGGIG--PAGSRGSSGPPGARG 424
>ADA1D_HUMAN (P25100) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)| (Alpha 1D-adrenoreceptor) (Alpha-1A adrenergic receptor) (Alpha adrenergic receptor 1a) Length = 572 Score = 28.5 bits (62), Expect = 9.7 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Frame = +2 Query: 80 DSHGGARPDGERGGVDG---PPSGPARAGVPPGARG 178 DS G G GG G P GPA GVP GA G Sbjct: 17 DSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGG 52
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 28.5 bits (62), Expect = 9.7 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Frame = +2 Query: 77 RDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 205 R S G G RG G DGP P GP A PPG +G+ AG Sbjct: 639 RGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAG 691 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 107 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 GERG G +G P P G+P GARGL R AG Sbjct: 463 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 502
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 92 GARP---DGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 GARP DG G DGP GPA G+ G G+ R +G+ Sbjct: 321 GARPTAPDGAPGRWDGPADGPA-PGLGRGGWGVGREAGGSGR 361
>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 265 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 6/35 (17%) Frame = +2 Query: 107 GERGG-VDGPPSGPARAGVPPG-----ARGLRRRG 193 G+RG VD PP+G +A +PPG A GL+ +G Sbjct: 150 GDRGKFVDDPPTGLEKAVIPPGKNVRSALGLKEQG 184
>YCAO_ECOLI (P75838) Hypothetical UPF0142 protein ycaO| Length = 586 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 282 EVPADMVARRSEVVERLRALQEAVAPIVAF 371 E+PAD++AR VVE + L+ PI A+ Sbjct: 218 EIPADVLARYPAVVEAIETLEAEGFPIFAY 247
>KAD2_ORYSA (Q08480) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 243 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Frame = +3 Query: 273 GTDEVPAD-MVARRSEVVE----RLRALQEAVAPIVAFLSSPQLVQELHAD 410 G D+V + ++ R+ + E RL A + P++ + S LV LHA+ Sbjct: 178 GVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAE 228
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +2 Query: 89 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQ 208 G P GERG G DGP +GP P GA G+ P+G+ Sbjct: 2837 GPVGPPGERGFTGKDGP-TGPRGPPGPAGAPGVPGVAGPSGK 2877
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 28.5 bits (62), Expect = 9.7 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Frame = +2 Query: 77 RDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 205 R S G G RG G DGP P GP A PPG +G+ AG Sbjct: 679 RGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAG 731 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 107 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 205 GERG G +G P P G+P GARGL R AG Sbjct: 503 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 542 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.130 0.499 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,068,376 Number of Sequences: 219361 Number of extensions: 809502 Number of successful extensions: 5728 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 4480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5606 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
