>LORI_HUMAN (P23490) Loricrin|
          Length = 316

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 318 AGGSTRWRGGSQRAAGKAACWSTGGG 241
           +GGS ++ GG   + G + C+S+GGG
Sbjct: 84  SGGSVKYSGGGGSSGGGSGCFSSGGG 109

>HNF3G_BOVIN (Q3Y598) Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box|
           protein A3)
          Length = 351

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +1

Query: 199 GRGPPFVHLRGREMPASG*PTCGLSRRSLGSTAPPSAAARLVTMASDQHP 348
           G GP  VH  G+EMP          RR L    PP +   L+TMA  Q P
Sbjct: 95  GPGPGLVH--GKEMPKG-------YRRPLAHAKPPYSYISLITMAIQQAP 135

>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa|
           protein)
          Length = 537

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 206 DRHSSTSAGERCPPPVDQHAAFPAARWDP-PRH 301
           + H+     E  PPP ++HA  PAA   P P H
Sbjct: 50  EEHAPPPKEEHAPPPKEEHAPAPAAETPPAPEH 82

>Y4FR_RHISN (P55456) Hypothetical 60.5 kDa protein y4fR|
          Length = 546

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 338 SDAIVTRRAAALGGAVDPSERRERPHVGQPEAGISRPRRWTNGG 207
           ++A  +  +++ G  V      ERP  G+P+  +SR R W   G
Sbjct: 38  TEAEASAASSSQGQIVAAPTAEERPWEGRPQEAVSRTRAWREAG 81

>HNF3G_HUMAN (P55318) Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box|
           protein A3) (Fork head-related protein FKH H3)
          Length = 350

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +1

Query: 160 LGPFISSAAARRKGRGPPFVHLRGREMPASG*PTCGLSRRSLGSTAPPSAAARLVTMASD 339
           LG    S+++     GP  VH  G+EMP          RR L    PP +   L+TMA  
Sbjct: 81  LGVSGGSSSSGYGAPGPGLVH--GKEMPKG-------YRRPLAHAKPPYSYISLITMAIQ 131

Query: 340 QHP 348
           Q P
Sbjct: 132 QAP 134

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 182  PPLDGREGDRHSSTSAGERCPPPVDQHAAFPAARWDPPRHLVL 310
            P L     +  SS+ AG   PPP  Q  A P     PP +L L
Sbjct: 2828 PVLGRNPAEPTSSSPAGPSPPPPAVQPVAPPPTSGPPPTYLTL 2870


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,532,046
Number of Sequences: 219361
Number of extensions: 704222
Number of successful extensions: 2378
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)