Clone Information

BLAST Search Result

Clone Name	bast64g11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-su...	137	1e-32
2	DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-su...	134	1e-31
3	DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-su...	132	4e-31
4	DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-su...	129	3e-30
5	DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-su...	129	3e-30
6	DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-su...	124	9e-29
7	DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-su...	124	9e-29
8	DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-su...	124	1e-28
9	DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-su...	124	1e-28
10	DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-su...	121	1e-27
11	DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-su...	120	2e-27
12	DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone...	116	3e-26
13	DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein ...	116	3e-26
14	DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein ...	103	3e-22
15	DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein ...	102	4e-22
16	DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-su...	100	2e-21
17	DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-su...	98	9e-21
18	DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-su...	97	2e-20
19	DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein ...	82	9e-16
20	DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein ...	81	1e-15
21	DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein ...	71	2e-12
22	FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1...	63	3e-10
23	FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1...	63	4e-10
24	FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1...	62	5e-10
25	FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1...	57	3e-08
26	FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1...	54	2e-07
27	FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1...	52	9e-07
28	FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1...	52	9e-07
29	FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1...	52	9e-07
30	FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1...	52	9e-07
31	FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1...	49	6e-06
32	Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092	46	5e-05
33	Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067	43	4e-04
34	DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein ...	32	0.59
35	PYRK_PYRAB (Q9UXV5) Probable dihydroorotate dehydrogenase electr...	31	1.7
36	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	30	2.3
37	PYRK_PYRKO (Q5JJ90) Probable dihydroorotate dehydrogenase electr...	30	2.9
38	PYRK_PYRHO (O57738) Probable dihydroorotate dehydrogenase electr...	30	2.9
39	CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (...	30	2.9
40	MOP_DESGI (Q46509) Aldehyde oxidoreductase (EC 1.2.99.7) (Molybd...	30	3.8
41	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	30	3.8
42	PYRK_METJA (Q58841) Probable dihydroorotate dehydrogenase electr...	30	3.8
43	IORA_BREDI (Q51697) Isoquinoline 1-oxidoreductase alpha subunit ...	30	3.8
44	XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (E...	29	5.0
45	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	29	5.0
46	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	29	5.0
47	COLI_THUOB (Q9YGK2) Corticotropin-lipotropin precursor (Pro-opio...	29	6.6
48	KCNA5_RABIT (P50638) Potassium voltage-gated channel subfamily A...	29	6.6
49	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	28	8.6
50	FER_PHYAF (P83524) Ferredoxin	28	8.6
51	ASCD_YERPS (Q66DP5) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-d...	28	8.6
52	ASCD_YERPE (P68641) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-d...	28	8.6

>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 253

 Score =  137 bits (345), Expect = 1e-32
 Identities = 62/75 (82%), Positives = 67/75 (89%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           KTF IYRW+PD P+ KPHL++YKVDL DCGPMVLDALLKIKNEQD +LTFRRSCREGICG
Sbjct: 21  KTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGICG 80

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNI G N LACL
Sbjct: 81  SCAMNIGGANTLACL 95

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>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 266

 Score =  134 bits (336), Expect = 1e-31
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           KTF +YRW+PD PS KPHL+ Y+VDL+DCGPMVLDALLKIK+EQD +LTFRRSCREGICG
Sbjct: 34  KTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICG 93

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNI G N LAC+
Sbjct: 94  SCAMNIGGRNTLACI 108

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>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 261

 Score =  132 bits (332), Expect = 4e-31
 Identities = 58/75 (77%), Positives = 68/75 (90%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K+F IYRW+PD+P+ KP +++YKVDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG
Sbjct: 29  KSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 88

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNI G N LACL
Sbjct: 89  SCAMNIGGRNTLACL 103

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>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 283

 Score =  129 bits (325), Expect = 3e-30
 Identities = 59/75 (78%), Positives = 64/75 (85%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K FSIYRW+PD PS KP L+ Y +DL  CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 52  KEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRRSCREGICG 111

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNIDG N LACL
Sbjct: 112 SCAMNIDGVNTLACL 126

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>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 252

 Score =  129 bits (325), Expect = 3e-30
 Identities = 57/75 (76%), Positives = 65/75 (86%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           KTF IYRW+P+ P  KP L+ Y VDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG
Sbjct: 22  KTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 81

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNI+G N LAC+
Sbjct: 82  SCAMNINGSNTLACI 96

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>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  124 bits (312), Expect = 9e-29
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K F IYRW+PD+   KP+++ Y+VDL +CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 47  KKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICG 106

Query: 410 SCAMNIDGDNGLACLT 457
           SCAMNI G N LAC++
Sbjct: 107 SCAMNIGGTNTLACIS 122

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>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 295

 Score =  124 bits (312), Expect = 9e-29
 Identities = 57/75 (76%), Positives = 63/75 (84%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K F IYRW+PD PS KP L+ Y +DL+  GPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 53  KQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCREGICG 112

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNIDG N LACL
Sbjct: 113 SCAMNIDGVNTLACL 127

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>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  124 bits (311), Expect = 1e-28
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = +2

Query: 227 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 406
           TKTF IYRW+PD P+ KP ++ Y +DL+  GPM+LDAL++IKNE DP+LTFRRSCREGIC
Sbjct: 63  TKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGIC 122

Query: 407 GSCAMNIDGDNGLACL 454
           GSCAMNIDG N LACL
Sbjct: 123 GSCAMNIDGVNTLACL 138

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>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 280

 Score =  124 bits (311), Expect = 1e-28
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K F+IYRWDPD    KPH++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 40  KKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 99

Query: 410 SCAMNIDGDNGLAC 451
           SCAMNI+G N LAC
Sbjct: 100 SCAMNINGGNTLAC 113

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>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 282

 Score =  121 bits (303), Expect = 1e-27
 Identities = 54/74 (72%), Positives = 62/74 (83%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K F+IYRWDPD    KP ++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 42  KKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 101

Query: 410 SCAMNIDGDNGLAC 451
           SCAMNI+G N LAC
Sbjct: 102 SCAMNINGGNTLAC 115

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>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score =  120 bits (301), Expect = 2e-27
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = +2

Query: 236 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC 415
           F +YRW+PD    KPH+  Y VDL+ CGPMVLDAL+KIKNEQD +LTFRRSCREG+CGSC
Sbjct: 11  FKVYRWNPDKKE-KPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSC 69

Query: 416 AMNIDGDNGLACL 454
           AMNIDG N LAC+
Sbjct: 70  AMNIDGTNTLACI 82

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>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur|
           protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP
           subunit of complex II)
          Length = 298

 Score =  116 bits (290), Expect = 3e-26
 Identities = 51/75 (68%), Positives = 62/75 (82%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           KTF IYR++P++P  KP ++ + VDL  CG M+LDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 54  KTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICG 113

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNI G N LAC+
Sbjct: 114 SCAMNIGGQNTLACI 128

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>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 259

 Score =  116 bits (290), Expect = 3e-26
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           + F+IYRWDPD+    P +  Y VD+  CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 28  RRFNIYRWDPDT-GENPRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNIDG N LAC+
Sbjct: 87  SCAMNIDGGNHLACI 101

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>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  103 bits (256), Expect = 3e-22
 Identities = 48/75 (64%), Positives = 58/75 (77%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           +   IYR+DPD     P +  +++DLS  GPM+LDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 28  RKIKIYRYDPDLDKN-PTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICG 86

Query: 410 SCAMNIDGDNGLACL 454
           SCAMNIDG N LAC+
Sbjct: 87  SCAMNIDGTNTLACI 101

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>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  102 bits (255), Expect = 4e-22
 Identities = 48/71 (67%), Positives = 57/71 (80%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           +YR+DPD     P +  +++DLS  GPMVLDAL+KIKNE D +LTFRRSCREGICGSCAM
Sbjct: 32  VYRYDPDLDEN-PTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAM 90

Query: 422 NIDGDNGLACL 454
           NIDG N LAC+
Sbjct: 91  NIDGTNTLACI 101

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>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 250

 Score =  100 bits (249), Expect = 2e-21
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K   IYRW+P+  +  P    + +  ++CGPM+LDAL++IKN QD SLTFRRSCREGICG
Sbjct: 21  KFIRIYRWNPNL-NLNPWFSIFPISTNNCGPMILDALIQIKNIQDSSLTFRRSCREGICG 79

Query: 410 SCAMNIDGDNGLACL 454
           SC+MNIDG N LACL
Sbjct: 80  SCSMNIDGTNSLACL 94

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>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K   IYRW P S   +     + +  S+CGPM+LDAL+KIK+EQD SL FRRSCREGICG
Sbjct: 11  KFIRIYRWTP-SNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCREGICG 69

Query: 410 SCAMNIDGDNGLACL 454
           SC+MNIDG N LACL
Sbjct: 70  SCSMNIDGINTLACL 84

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>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 262

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = +2

Query: 230 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           K   I+RWD  S    P    Y V L +CGP+VLDAL+KIKNE D +++FRRSCREGICG
Sbjct: 21  KLIKIFRWD-SSEKKDPWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGICG 79

Query: 410 SCAMNIDGDNGLACL 454
           SCA+NI+G N LACL
Sbjct: 80  SCAININGTNSLACL 94

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>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = +2

Query: 236 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 412
           FSIYR++PD     P ++DY ++  +   M+L DAL+++K E+DPSL+FRRSCREG+CGS
Sbjct: 5   FSIYRYNPDVDDA-PRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62

Query: 413 CAMNIDGDNGLACLT 457
             +N++G NGLAC+T
Sbjct: 63  DGLNMNGKNGLACIT 77

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>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = +2

Query: 236 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 412
           FSIYR++PD  +  P ++DY ++  +   M+L DAL+++K E+DPSL+FRRSCREG+CGS
Sbjct: 5   FSIYRYNPDVDNA-PRMQDYTLEGEEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62

Query: 413 CAMNIDGDNGLACLT 457
             +N++G NGLAC+T
Sbjct: 63  DGLNMNGKNGLACIT 77

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>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 235

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = +2

Query: 233 TFSIYRWDPDSPSTKPHLKDYKVDLSDC-GPMVLDALLKIKNEQDPSLTFRRSCREGICG 409
           TFSI R++P++   KP+++D+++D+S   G M+L+AL  ++ E+ P +  RRSC EG+CG
Sbjct: 2   TFSIMRFNPETDK-KPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCG 59

Query: 410 SCAMNIDGDNGLACLT 457
           S  MNI+G N LAC+T
Sbjct: 60  SDGMNINGKNALACVT 75

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>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 239

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = +2

Query: 233 TFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGS 412
           T  ++++DP S  +KPH ++YK++ +    + +  L  I+   DP L F   CR GICGS
Sbjct: 6   TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIFI-VLNMIRETYDPDLNFDFVCRAGICGS 64

Query: 413 CAMNIDGDNGLACLT 457
           C M I+G   LAC T
Sbjct: 65  CGMMINGRPSLACRT 79

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>FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + ++DP S  +KPH K+Y++  +    + + AL  I+  QDP L+F   CR GICGSCAM
Sbjct: 12  VLKFDPQSAVSKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70

Query: 422 NIDGDNGLACLT 457
            ++G   LAC T
Sbjct: 71  MVNGRPRLACKT 82

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>FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + ++DP S   KPH K+Y++  +    + + AL  I+  QDP L+F   CR GICGSCAM
Sbjct: 12  VLKFDPQSAVNKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70

Query: 422 NIDGDNGLACLT 457
            ++G   LAC T
Sbjct: 71  MVNGRPRLACKT 82

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>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 256

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P+    +PHL  Y+V   D    +LDAL  IK++ +PSL++R SCR  ICGSC M
Sbjct: 11  VLRYNPEIDQ-EPHLSTYQVPY-DNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 69  MVNNKPKLACKT 80

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>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 247

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 33/72 (45%), Positives = 43/72 (59%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R+ P+  S  P  + Y+V L+     VLD L  IK+  D +L+FR SCR GICGS  M
Sbjct: 9   VSRYRPEIESA-PTFQAYEVPLTREWA-VLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66

Query: 422 NIDGDNGLACLT 457
            I+GD  LAC T
Sbjct: 67  TINGDPKLACAT 78

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>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 68  MVNNVPKLACKT 79

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>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 68  MVNNVPKLACKT 79

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>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 68  MVNNVPKLACKT 79

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>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 68  MVNNVPKLACKT 79

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>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 244

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +2

Query: 242 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 421
           + R++P++    PH   Y V   +    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 11  VMRYNPETDDA-PHFVTYDVPYDE-QTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68

Query: 422 NIDGDNGLACLT 457
            ++    LAC T
Sbjct: 69  MVNRVPKLACKT 80

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>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092|
          Length = 489

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 25/61 (40%), Positives = 36/61 (59%)
 Frame = +2

Query: 275 KPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACL 454
           K +L+ Y+V  +     VL+AL  I    + ++ FR SCR   CGSCA+ I+G+  LAC 
Sbjct: 13  KEYLESYEVPENIT---VLEALEYINKHYEANILFRASCRNAQCGSCAVTINGEPRLACE 69

Query: 455 T 457
           T
Sbjct: 70  T 70

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>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +2

Query: 317 GPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLT 457
           G  +LDAL  I      ++ FR SC+ G CGSCA+ I+  + LAC T
Sbjct: 22  GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKT 68

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>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 252

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +2

Query: 341 LKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLAC 451
           + +K E+   +T+  +C E +CG+C+M I+G    +C
Sbjct: 47  VNVKGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSC 83

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>PYRK_PYRAB (Q9UXV5) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 247

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 296 KVDLSD---CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 421
           KV+ S    CGP V+ A +L+I N +   ++  R   C  GICGSCA+
Sbjct: 163 KVEFSQVYACGPEVMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210

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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
 Frame = +1

Query: 280 PPQGLQG-----------GPLRLRPHGARRAPQDQERAGPVPHLPPELP 393
           PP G++G           GP R  P+G +R P    R  P P +PP  P
Sbjct: 369 PPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGP 417

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>PYRK_PYRKO (Q5JJ90) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 233

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +2

Query: 314 CGPM-VLDALLKIKNEQDPSLTFRR--SCREGICGSC 415
           CGP  +L A+LK+ N ++  ++  R   C  G+CGSC
Sbjct: 174 CGPEPMLKAVLKVMNYKNVQISAERYMKCGIGVCGSC 210

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>PYRK_PYRHO (O57738) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 247

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +2

Query: 314 CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 421
           CGP ++ A +L+I N +   ++  R   C  GICGSCA+
Sbjct: 172 CGPEIMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210

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>CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (Cx44)|
          Length = 412

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +1

Query: 265 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVP----HLPPELP 393
           P    PP    GGP +  P GA  +  D +  G V     H PPE P
Sbjct: 342 PPASTPPAAPAGGPQQFLPGGAAGSSGDSDGEGAVTAVELHAPPEPP 388

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>MOP_DESGI (Q46509) Aldehyde oxidoreductase (EC 1.2.99.7) (Molybdenum iron|
           sulfur protein)
          Length = 907

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 332 DALLKIKNEQDPSLT-FRRSCREGICGSCAMNIDGDNGLACLT 457
           +ALL     Q   LT  +  C +G CG+C++ +DG    AC+T
Sbjct: 20  EALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVT 62

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 265 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVPHLPPELP 393
           P D   PQG+Q  P    P G +  P  Q  +GP  H+ P+ P
Sbjct: 668 PQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710

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>PYRK_METJA (Q58841) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 257

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 275 KPHLKDYKVDLS-DCGP-MVLDALLKIKNEQD----PSLTFRRSCREGICGSCAMNIDG 433
           K  LK+ K DL   CGP +++  +++I NE +     S+     C  GICG C ++ +G
Sbjct: 164 KEVLKEEKFDLIITCGPEIMMKKVVEIANEYNIPVQVSMERYMKCGIGICGQCCVDDEG 222

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>IORA_BREDI (Q51697) Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)|
          Length = 152

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 389 CREGICGSCAMNIDGDNGLACLT 457
           C  G+CG+C ++I+G+   +C+T
Sbjct: 39  CGLGLCGACTVHINGEAARSCIT 61

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>XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (EC 1.17.1.4)|
           (XDHase subunit E)
          Length = 173

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 386 SCREGICGSCAMNIDGDNGLACLT 457
           SC  G CG+C++ IDG    AC+T
Sbjct: 51  SCGIGRCGACSILIDGKLANACMT 74

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 265 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 393
           P+   PP    G   R  P   +   R+  D  R+GP P LPP+ P
Sbjct: 368 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 413

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 265 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 393
           P+   PP    G   R  P   +   R+  D  R+GP P LPP+ P
Sbjct: 362 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 407

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>COLI_THUOB (Q9YGK2) Corticotropin-lipotropin precursor (Pro-opiomelanocortin)|
           (POMC) [Contains: Corticotropin (Adrenocorticotropic
           hormone) (ACTH); Melanotropin alpha (Alpha-MSH);
           Corticotropin-like intermediary peptide (CLIP);
           Lipotropin beta (Beta-LPH)
          Length = 222

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 441 PLSPSMFMAQLPQMPSRQLRRKVRDGSCSFLILRSASSTMGPQSERS-TL*SLRWG 277
           P+ P     Q P +P           S SF++  S+SS+  PQS+RS ++   RWG
Sbjct: 54  PVIPGNAHLQPPPLPDPS-------SSSSFILPSSSSSSSSPQSKRSYSMEHFRWG 102

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>KCNA5_RABIT (P50638) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5)
          Length = 598

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +1

Query: 277 APPQGLQGGPLRLRPHG----ARRAPQDQERAGPVPHLPPELP 393
           AP  GL  G     P G    ARR  +  ER  P+P  PPELP
Sbjct: 30  APTAGLGDGSQEPAPRGRGCSARRGAEPGER--PLPPQPPELP 70

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 265 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 393
           P+   PP    G   R  P   +   R+  D  R+GP P LPP+ P
Sbjct: 378 PLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRP 423

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>FER_PHYAF (P83524) Ferredoxin|
          Length = 97

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = +2

Query: 293 YKVDL-SDCGPMVLDA-----LLKIKNEQDPSLTFRRSCREGICGSCA 418
           YKV L +  GP+V D      +L    EQ   L +  SCR G C SCA
Sbjct: 3   YKVKLITPDGPVVFDCPDNEYILDAAEEQGHDLPY--SCRAGSCSSCA 48

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>ASCD_YERPS (Q66DP5) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase|
           reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase)
           (EC 1.17.1.-) (E3)
          Length = 328

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 308 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGD 436
           SD    +LDA L      D ++    SC++G CGSC A+ I G+
Sbjct: 15  SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGE 52

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>ASCD_YERPE (P68641) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase|
           reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase)
           (EC 1.17.1.-) (E3)
          Length = 328

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 308 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGD 436
           SD    +LDA L      D ++    SC++G CGSC A+ I G+
Sbjct: 15  SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGE 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,365,832
Number of Sequences: 219361
Number of extensions: 438983
Number of successful extensions: 2135
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result