>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = -2

Query: 86  GEQSNTW*ILLHNDRKSRHRRIKKQRRY 3
           GEQ N W +L   D  SRHR  K  RRY
Sbjct: 66  GEQPNPWDLLQPQDAMSRHRGAKPPRRY 93

>BETA_RHILO (Q985M5) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)|
          Length = 550

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3

Query: 370 MARALGGASAPNVGRGERRAQASHASLDSDLEAFSHNPAHGSFAP 236
           + R + G SA +  RG+  +  SH   D DL+ F  + A  ++ P
Sbjct: 423 LTREIFGQSAFDAFRGQEISPGSHVQSDDDLDVFIRDHAESAYHP 467

>PRGR_MOUSE (Q00175) Progesterone receptor (PR)|
          Length = 923

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -3

Query: 367 ARALGGASAPNVGRGERRAQASHASLDSDLEAFSHNPAHGSFAPLAFQPSAMTNCVNQR 191
           A   GG S+  V      A +S ++L+  L      P  GSFAPL  +P A  +C+  R
Sbjct: 432 AAVAGGPSSAAVSP----ASSSGSALECILYKAEAPPTQGSFAPLPCKPPAAASCLLPR 486

>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 267 LNASKSESKLACDACARRSPRPTLGALAPPRAR 365
           L   +  S LACD C+ RS + +   LAP R++
Sbjct: 234 LGPGRPRSPLACDDCSLRSAKSSFSLLAPIRSK 266

>IL17C_HUMAN (Q9P0M4) Interleukin-17C precursor (IL-17C) (Cytokine CX2)|
          Length = 197

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -3

Query: 358 LGGASAPNVGRGERRAQASHASLDSDLEAFSHNPAHGSFAPLAFQPSAMTNC 203
           LG A    + RG +  QA   +L S LEA SH   H        +PSA T C
Sbjct: 44  LGQAPPHLLARGAKWGQALPVALVSSLEAASHRGRHE-------RPSATTQC 88

>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)|
           (Sterol regulatory element-binding transcription factor
           1) (Adipocyte determination- and
           differentiation-dependent factor 1) (ADD1) (Fragment)
          Length = 1024

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 28/71 (39%), Positives = 35/71 (49%)
 Frame = -3

Query: 421 GSFEAADHGTSAGPT*PMARALGGASAPNVGRGERRAQASHASLDSDLEAFSHNPAHGSF 242
           G F+A   G   G T P +    GAS+P        + +S ASL S LEAF   P   + 
Sbjct: 21  GLFDAPYAGGETGDTGPSSP---GASSPE-------SFSSPASLGSSLEAFLGGP-KVTP 69

Query: 241 APLAFQPSAMT 209
           APL+  PSA T
Sbjct: 70  APLSPPPSAPT 80

>PTH_NANEQ (P61235) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -3

Query: 337 NVGRGERRAQASHASLDSDLEAFSHN 260
           ++G+G+  AQ +HASLD+ L+ + +N
Sbjct: 12  DIGKGKLCAQVAHASLDAALKVYRNN 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,114,420
Number of Sequences: 219361
Number of extensions: 1195785
Number of successful extensions: 3644
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3637
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)