ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast64g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 69 7e-12
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 65 1e-10
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 42 7e-04
4SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 36 0.037
5EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 36 0.037
6KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 30 2.7
7KPRS_CLOTE (Q899I8) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 29 5.9
8GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-... 29 5.9

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +3

Query: 195 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDF-AGGPTGRFSNGLTTVDVISQLLGF 371
           +P  F FGDS+ D GNNN + +  + NY PYG+DF  G  TGRFSNG    D IS+ LG 
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 372 DDFIP 386
            + +P
Sbjct: 183 KEIVP 187



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 195 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFA-GGPTGRFSNGLTTVDVISQLLGF 371
           +P  F FGDS+ D GNNN + +  ++NY PYG+DF     TGRFSNG+   D +++ +G 
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 372 DDFIP 386
            + +P
Sbjct: 262 KEIVP 266



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +3

Query: 198 PCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLG 368
           P  F FGDS  D G  +     A    PP+G  F G P GR+ +G   +D I++ LG
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAG---PPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 186 EPQVPCYFVFGDSLVDNG 239
           +PQVP YF+FGDSL DNG
Sbjct: 1   DPQVPXYFIFGDSLYDNG 18



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 198 PCYFVFGDSLVDNGNNNGIVSLARANYP---PYGVDFAGGPTGRFSNGLTTVDVISQ 359
           P  F FGDS  D G        A A YP   PYG  F    TGR+S+G   +D I++
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAE 83



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>KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 319

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
 Frame = +3

Query: 225 LVDNGNN------NGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFDDFI 383
           ++++G N      N   SLA       GV       G+FSNG T VD+   + G D F+
Sbjct: 1   MINHGKNIKIFTGNSYPSLAEEIADIIGVQVGDSRVGKFSNGETAVDINETVRGTDLFL 59



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>KPRS_CLOTE (Q899I8) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 320

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 237 GNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFDDFI 383
           GN+N    LA+      GV       GRFS+G  TV++   + G D FI
Sbjct: 15  GNSND--KLAKDIADIVGVPLGSAEVGRFSDGEITVNINETVRGIDAFI 61



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>GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor PGR10)
          Length = 731

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
 Frame = +3

Query: 15  LVAITINLTHSLA--------HSNQQQLTRSAPVPLGSAMAGR 119
           LV +++ LTH L         HSN Q+++R A +P     AGR
Sbjct: 205 LVGLSVPLTHRLLCSEEPPRLHSNYQEISRGASIPGTPPTAGR 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.123    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,581,956
Number of Sequences: 219361
Number of extensions: 542289
Number of successful extensions: 1841
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
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