| Clone Name | bast64f12 |
|---|---|
| Clone Library Name | barley_pub |
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 73.6 bits (179), Expect = 2e-13 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Frame = +3 Query: 198 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 374 +C+ K + +Q A+D+ACG G DC+ + C++P VVAH +YA N+YYQK Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419 Query: 375 MGATCDFMGVATLT 416 +CDF GVAT+T Sbjct: 420 ASGSCDFKGVATVT 433
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 71.6 bits (174), Expect = 7e-13 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Frame = +3 Query: 192 AMYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKN 368 +M+CV K+DA+ + +++ACG+G A+C I PC+ P V +H S+A N YYQK Sbjct: 360 SMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKM 419 Query: 369 AGMGATCDFMGVATLT 416 G TCDF G A T Sbjct: 420 KSAGGTCDFDGTAITT 435
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 71.2 bits (173), Expect = 9e-13 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Frame = +3 Query: 198 YCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAG 374 YC+ + +Q A+D+ACG G ++C++I C+QP +V H S+A NSYYQK Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331 Query: 375 MGATCDFMGVATLT 416 +CDF GVA +T Sbjct: 332 ASGSCDFKGVAMIT 345
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 70.9 bits (172), Expect = 1e-12 Identities = 34/73 (46%), Positives = 40/73 (54%) Frame = +3 Query: 198 YCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGM 377 +CV K AN +Q I+YACG DC I S G CF P S+ AH SY N+YYQ N Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435 Query: 378 GATCDFMGVATLT 416 CDF G +T Sbjct: 436 DLACDFKGTGIVT 448
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +3 Query: 195 MYCVCKSDANPVAMQKAIDYACGKG-ADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371 ++CV AN +++ + AC + C + C++P+S+ H SYA NSY+ + Sbjct: 388 VWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFR 447 Query: 372 GMGATCDFMGVA 407 C F G+A Sbjct: 448 NQSIQCFFNGLA 459
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = +3 Query: 198 YCVCKSDANPVAMQ--KAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371 +C+ +AN Q ++ YAC ADCT + C +++ + SYA NSYYQ + Sbjct: 365 WCILAPNANLQDPQLGPSVSYACDH-ADCTSLGYGSSCGN-LNLAQNVSYAFNSYYQVSN 422 Query: 372 GMGATCDFMGVATLT 416 + + C F G++ ++ Sbjct: 423 QLDSACKFPGLSIVS 437
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 38.5 bits (88), Expect = 0.006 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 5/81 (6%) Frame = +3 Query: 186 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 350 S ++ CV + + DY C K DC+ I +N + P S+ N Sbjct: 373 SSSLKCVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLN 431 Query: 351 SYYQKNAGMGATCDFMGVATL 413 YY++ + CDF G A+L Sbjct: 432 LYYEEQNESKSACDFSGSASL 452
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 37.7 bits (86), Expect = 0.011 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Frame = +3 Query: 201 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACNSYYQK 365 CV D + + ++ C + DC+ I++NG + + S+ N YY+K Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437 Query: 366 NAGMGATCDFMGVATL 413 + G + C F G ATL Sbjct: 438 SGGSKSDCSFSGSATL 453
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 37.0 bits (84), Expect = 0.018 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +3 Query: 198 YCVCKSDA--NPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNA 371 +CV K + + + A+ YAC G DCT + C + + SYA NSYYQ Sbjct: 362 WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCAN-LDGKQNISYAFNSYYQIQD 419 Query: 372 GMGATCDFMGVATLT 416 + C F ++ +T Sbjct: 420 QLDTACKFPNISEVT 434
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 36.6 bits (83), Expect = 0.024 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Frame = +3 Query: 186 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGP-----CFQPISVVAHCSYACN 350 S ++ CV + Y C K DC I +NG + P S+ N Sbjct: 375 SASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDKLSFVMN 433 Query: 351 SYYQKNAGMGATCDFMGVATL 413 YY++N + CDF G A+L Sbjct: 434 LYYEQNKESKSACDFGGSASL 454
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 32.7 bits (73), Expect = 0.35 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +3 Query: 204 VCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCSYACNSYYQKNAGMGA 383 +C ++P Q + AC + C Q C +PI V CS A + QK++ A Sbjct: 137 ICSGASSPCCQQSSCQSACCTFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPA 196 Query: 384 TC 389 C Sbjct: 197 CC 198
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 32.3 bits (72), Expect = 0.45 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 5/81 (6%) Frame = +3 Query: 186 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPC-----FQPISVVAHCSYACN 350 S + CV D + CG DC I++NG F S SY N Sbjct: 385 SQSFNCVVADDVDAEDYSTLFGEVCGY-IDCGDISANGNTGEYGGFSFCSDKDRLSYVLN 443 Query: 351 SYYQKNAGMGATCDFMGVATL 413 YY CDF G A++ Sbjct: 444 QYYHDQNERADACDFAGSASI 464
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 31.6 bits (70), Expect = 0.78 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Frame = +3 Query: 186 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQPISVVAHCS------YAC 347 S ++ CV D + CG DC+ I+++G + V + CS Y Sbjct: 385 SKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGSKGE-YGVASFCSDKDRLSYVL 442 Query: 348 NSYYQKNAGMGATCDFMGVATL 413 N YY + CDF G A++ Sbjct: 443 NQYYLDQDKKSSACDFKGSASI 464
>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor| Length = 4007 Score = 30.4 bits (67), Expect = 1.7 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +3 Query: 201 CVCKSDANPVAMQKAIDYACGKGADCTQITSNGPCFQP-ISVVAHCSYACNSYYQKNAGM 377 C+C Q + CGKG ++ +G C + +S CSY YQ Sbjct: 242 CICDRGEVRCHKQACLPLRCGKGQ--SRARRHGQCCEECVSPAGSCSYDGVVRYQDEMWK 299 Query: 378 GATCDF 395 G+ C+F Sbjct: 300 GSACEF 305
>NPC1_HUMAN (O15118) Niemann-Pick C1 protein precursor| Length = 1278 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +3 Query: 186 SDAMYCVCKSDANPVAMQKAIDYACGKGADCTQITS 293 ++AMY C+ P + KA+ CGK AD T+ Sbjct: 153 ANAMYNACRDVEAPSSNDKALGLLCGKDADACNATN 188
>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)| (Loop-tail-associated protein) (Loop-tail protein 1) Length = 521 Score = 29.3 bits (64), Expect = 3.8 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 167 QEHEDQRSRHCSKQRDGAR 111 ++H D+R RH SK RDG+R Sbjct: 21 RKHRDRRDRHRSKSRDGSR 39
>RSMB_VIBCH (Q9KVU5) Ribosomal RNA small subunit methyltransferase B (EC| 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) Length = 434 Score = 29.3 bits (64), Expect = 3.8 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Frame = +2 Query: 2 LHTTTPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALAR--- 172 L T +H LP A+ A ALT A + EL C G H L R Sbjct: 216 LETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERTPE 275 Query: 173 -HVRRLRCDVLRVQVGRE 223 V + CD R++ RE Sbjct: 276 SQVVAIDCDETRLKRVRE 293
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = +3 Query: 207 CKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKNA 371 C D++ + C + C Q + CF+PI V CS A S Q+++ Sbjct: 145 CSEDSSSCCQHSSCQPTCCTSSPCQQSCYVPVCCKPVCFKPICCVPVCSGASTSCCQQSS 204 Query: 372 GMGATC 389 A C Sbjct: 205 CQPACC 210
>DLDH_TRYBB (Q04933) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (Dihydrolipoamide| dehydrogenase) Length = 479 Score = 29.3 bits (64), Expect = 3.8 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Frame = +2 Query: 14 TPLHSLPRHADXXXXXXXXXATSALTSAAREELELHPAACCNGGSSGPHALARHVRR--- 184 T + PR A AL +E+ + NG ++G AL V + Sbjct: 210 TVVEFAPRCAPTLDSDVTDALVGALKRNGEDEVPMTGIEGVNGTNNGSIALTLEVEQAGG 269 Query: 185 ----LRCDVLRVQVGREP 226 L CD L V VGR P Sbjct: 270 QAETLHCDALLVSVGRRP 287
>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1| Length = 328 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +3 Query: 207 CKSDANPVAMQKAIDYACGKGA--DCTQITSNGPCFQPISVVAHCS 338 C+SDA PVA+Q A G GA C + + P P + A S Sbjct: 28 CRSDARPVALQPAFPLGNGDGAFVSCLPLAAARPSPSPPAAPARPS 73
>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2) (Strabismus| 1) (Loop-tail protein 1 homolog) Length = 521 Score = 28.9 bits (63), Expect = 5.0 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 167 QEHEDQRSRHCSKQRDGAR 111 ++H D+R RH SK RDG R Sbjct: 21 RKHRDRRDRHRSKSRDGGR 39
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = +3 Query: 204 VCKSDANPVAMQKAIDYACGKGADCTQ-----ITSNGPCFQPISVVAHCSYACNSYYQKN 368 VC D++ Q + AC + C Q + C +P+ V CS A + Q++ Sbjct: 242 VCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQS 301 Query: 369 AGMGATC 389 + A C Sbjct: 302 SCQPACC 308
>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2813 Score = 28.9 bits (63), Expect = 5.0 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = -3 Query: 226 GFASDLHTQYIASEPANMASKSMRTRGAAIAASSGMELELFSRRRGQSTSSWQAKR 59 GF D+ QY+ + A++++ S+ A+ SS +SR G+ST S Q++R Sbjct: 169 GFFLDV-AQYLLPDEADISTLSLARASPALTRSSPAPGSGYSRSGGRSTPSTQSQR 223
>REV_HV1BN (P12485) REV protein (Anti-repression transactivator protein)| (ART/TRS) (Fragment) Length = 106 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = -1 Query: 234 SPPGSRPTCTRSTSHLSRRTWRARA*GPEEPPLQQAAGWXXXXSL 100 S P RP TR RR WRAR + +Q +GW L Sbjct: 15 SNPPPRPEGTRQARRNRRRRWRAR-----QRQIQSLSGWILSTFL 54
>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding| protein MBD1) (Protein containing methyl-CpG-binding domain 1) Length = 605 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +1 Query: 16 PTPLSPTPRRLAPSPSLLASY*CSD 90 P P P PR LAPSP Y C D Sbjct: 298 PEPTEPHPRALAPSPPAEFIYYCVD 322
>CALD1_HUMAN (Q05682) Caldesmon (CDM)| Length = 793 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = -3 Query: 208 HTQYIASEPANMASKSMRTRGAAIAASSGMELELFSRRRGQSTS 77 HT+ S P AS + A +G LE RRRG++ S Sbjct: 505 HTENTFSRPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETES 548 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,764,668 Number of Sequences: 219361 Number of extensions: 844544 Number of successful extensions: 3455 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3449 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)