Clone Information

BLAST Search Result

Clone Name	bast64f08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)	33	0.30
2	RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun...	33	0.39
3	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	32	0.66
4	RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subun...	32	0.87
5	IF2_SYNEL (Q8DK04) Translation initiation factor IF-2	31	1.5
6	KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)	31	1.5
7	FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear...	31	1.9
8	RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun...	31	1.9
9	RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subun...	30	2.5
10	MSH6_SCHPO (O74502) DNA mismatch repair protein msh6	30	2.5
11	TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki...	30	2.5
12	RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun...	30	2.5
13	RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun...	30	2.5
14	RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun...	30	2.5
15	ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex...	30	3.3
16	NIPBL_HUMAN (Q6KC79) Nipped-B-like protein (Delangin) (SCC2 homo...	30	3.3
17	BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc...	30	3.3
18	NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SC...	30	3.3
19	RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subun...	30	3.3
20	ADCY9_XENLA (P98999) Adenylate cyclase type 9 (EC 4.6.1.1) (Aden...	30	3.3
21	RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subun...	30	3.3
22	LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Ma...	30	4.3
23	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	29	5.6
24	VE2_HPV08 (P06422) Regulatory protein E2	29	5.6
25	LEG3_CRILO (P47953) Galectin-3 (Galactose-specific lectin 3) (Ma...	29	5.6
26	ATPG_CAUCR (Q9A2V8) ATP synthase gamma chain (EC 3.6.3.14) (ATP ...	29	7.3
27	DCP2_ASHGO (Q75BK1) mRNA decapping enzyme 2 (EC 3.-.-.-)	29	7.3
28	ORC4_SCHPO (Q9Y794) Origin recognition complex subunit 4	29	7.3
29	CIC_HUMAN (Q96RK0) Protein capicua homolog	28	9.6
30	ATU_DROME (Q94546) Another transcription unit protein	28	9.6
31	DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)	28	9.6
32	MEI9_DROME (Q24087) Protein mei-9 (Protein meiotic 9)	28	9.6
33	SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)	28	9.6
34	RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun...	28	9.6
35	PRA_MYCLE (P41484) Proline-rich antigen (36 kDa antigen)	28	9.6
36	RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subun...	28	9.6
37	ATPBM_ARATH (P83483) ATP synthase beta chain 1, mitochondrial pr...	28	9.6

>SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)|
          Length = 1053

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -2

Query: 242 GKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGF-GAGTPEPSPQS 102
           G  P    PGPSP               N P A GF G+GTPEP  ++
Sbjct: 501 GSLPGDLQPGPSPESEGGPTLPGVGPNYNSPRAGGFQGSGTPEPGSET 548

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>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1840

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 218  PGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPL 39
            P  SPG   ++           PT+ G+   +P  SP S ++S S     PTS AY  P 
Sbjct: 1539 PSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY-SPT 1597

Query: 38   ARGCSPWRP 12
            +   SP  P
Sbjct: 1598 SPSYSPTSP 1606



 Score = 32.0 bits (71), Expect = 0.87
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS AY  P + G SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPGYSPTSP 1711



 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = -2

Query: 272  TSSESTVSCSGKAPEGAIPGPS-PGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 96
            TS   + +  G +P      PS PG    +        S  PT+  +   +P  SP S S
Sbjct: 1562 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621

Query: 95   FSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            +S +  S  PTS +Y  P +   SP  P
Sbjct: 1622 YSPTSPSYSPTSPSY-SPTSPAYSPTSP 1648



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
 Frame = -2

Query: 272  TSSESTVSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 96
            TS   + S  G +P      P SP     +        S  PT+  +   +P  SP S S
Sbjct: 1576 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635

Query: 95   FSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            +S +  +  PTS AY  P +   SP  P
Sbjct: 1636 YSPTSPAYSPTSPAY-SPTSPAYSPTSP 1662



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = -2

Query: 284  PLVRTSSESTVSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSP 108
            P V   + S  S  G +P      P SPG    +           PT+  +   +P  SP
Sbjct: 1530 PYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1589

Query: 107  QSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
             S ++S +  S  PTS +Y  P +   SP  P
Sbjct: 1590 TSPAYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1620



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPAYSPTSP 1704



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
 Frame = +2

Query: 32  LWPMEQCRQGKSAKRIRNFGKRIGSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGT 211
           L P  +  +G S+    + G   GS +W  G RP+       C   +R E+    A  G 
Sbjct: 521 LTPRARSEEGASSDSSASTGSHEGSSEW--GGRPQ------GCPGKARAETSQQEASEGG 572

Query: 212 DRESPLRELSPSMKQSTQ-NWYGQG 283
           D  SP   LS       Q    GQG
Sbjct: 573 DPASPALSLSSLRSDDLQAETQGQG 597

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>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1) (B220)
          Length = 1733

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+ GFG  +P  SP S ++S +  +  PTS +Y  P +   SP  P
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSY-SPTSPSYSPTSP 1575



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
 Frame = -2

Query: 272  TSSESTVSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 96
            TS    VS  G +P      P SP     +        S  PT+  +   +P  SP S S
Sbjct: 1531 TSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1590

Query: 95   FSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            +S +  S  PTS +Y  P +   SP  P
Sbjct: 1591 YSPTSPSYSPTSPSY-SPTSPSYSPTSP 1617



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
 Frame = -2

Query: 242  GKAPEGAIPG---PSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSV 72
            G+AP    PG    SPG    +        +  PT+  +   +P  SP S S+S +  S 
Sbjct: 1527 GEAPTS--PGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1584

Query: 71   LPTSLAYIVPLARGCSPWRP 12
             PTS +Y  P +   SP  P
Sbjct: 1585 SPTSPSY-SPTSPSYSPTSP 1603



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  +  PTS +Y  P + G SP  P
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY-SPTSPGYSPGSP 1715



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS AY  P +   SP  P
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY-SPTSPSYSPTSP 1673



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSP 1701



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1695



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPAYSPTSP 1666



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1659



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1652



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1600 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1645



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1638



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1586 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1631



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1579 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1624

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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 246 LGESSRRGDSRSVPRPARGDPLSPREQLEQSANSRRVRGRDPRAQ 112
           + +S +R     VPRPAR  P++P  + E+S+  ++ R RD R +
Sbjct: 310 VSQSLQRPPKPKVPRPAR--PVTPAAKTEKSSEKKQSRHRDRRPE 352

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>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1174

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
 Frame = -2

Query: 287 IPLVRTSSESTVSCSGKAPEGAIPGPSP--GRHAATXXXXXXXXSNPPTADGFGAGTPEP 114
           +   R S  +T + S  AP     G  P  G    +         N  T  G+G    + 
Sbjct: 666 VDAARASYSTTGTASTGAPTSPTSGSRPPSGPRTQSSVAAAAAAMNKATQPGYGRSNTDY 725

Query: 113 SPQSQSFSRSYGSVLPT 63
           SPQS    RS GS  PT
Sbjct: 726 SPQS---GRSSGSGYPT 739

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>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3|
           forkhead homolog 1) (HNF-3/forkhead-like protein 1)
           (HFH-1) (HFH-1l)
          Length = 400

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/65 (33%), Positives = 27/65 (41%)
 Frame = -2

Query: 275 RTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 96
           R S  +TVS SG  PE A PGP+    AA          +P       A   E S  +  
Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPAGTPQAAPAARSSPIARSP-------ARQEERSSPASK 263

Query: 95  FSRSY 81
           FS S+
Sbjct: 264 FSSSF 268

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>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1887

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = -2

Query: 236  APEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSL 57
            +P   +  PS  +H+ +           PT   + A +P  SP    +S S     PTS 
Sbjct: 1792 SPTSPLYSPSSPQHSPSNQYS-------PTGSTYSATSPRYSPNMSIYSPSSTKYSPTSP 1844

Query: 56   AYIVPLARGCSPWRP 12
             Y  P AR  SP  P
Sbjct: 1845 TY-TPTARNYSPTSP 1858

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>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1752

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  + A +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1601 PTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1646



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = -2

Query: 209  SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARG 30
            SP   A +        S  PT+  +   +P  SP S S+S +  S  PTS +Y  P +  
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPS 1661

Query: 29   CSPWRP 12
             SP  P
Sbjct: 1662 YSPTSP 1667



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/85 (29%), Positives = 34/85 (40%)
 Frame = -2

Query: 266  SESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSR 87
            S S  S S  A   +    SP     +        S  PT+  +   +P  SP S S+S 
Sbjct: 1598 SYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657

Query: 86   SYGSVLPTSLAYIVPLARGCSPWRP 12
            +  S  PTS +Y  P +   SP  P
Sbjct: 1658 TSPSYSPTSPSY-SPTSPSYSPTSP 1681



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSY-SPTSPSYSPTSP 1632



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1751



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1744



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1737



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1730



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1723



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1716



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1709



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1702



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1695

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>MSH6_SCHPO (O74502) DNA mismatch repair protein msh6|
          Length = 1254

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -2

Query: 266 SESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSR 87
           + S V+ +  +PE  +P  SP  HA T          PP++D F       SP S S  R
Sbjct: 62  NSSNVNKNSSSPERELP-TSPSHHANTEIDSSSSMLPPPSSDPFS------SPLSSSLHR 114

Query: 86  S 84
           S
Sbjct: 115 S 115

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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 284 PLVRTSSESTVSCSGKAPEGAIPGPSP 204
           P V  S+E  + C G +PE   PGP+P
Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484

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>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = -2

Query: 251  SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 75
            S  G  P+     P+   ++ T         N  PT+  +   +P  SP S S+S +  S
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663

Query: 74   VLPTSLAYIVPLARGCSPWRP 12
              PTS +Y  P +   SP  P
Sbjct: 1664 YSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 1754



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1747



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1739



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1732



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1725



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690

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>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = -2

Query: 251  SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 75
            S  G  P+     P+   ++ T         N  PT+  +   +P  SP S S+S +  S
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663

Query: 74   VLPTSLAYIVPLARGCSPWRP 12
              PTS +Y  P +   SP  P
Sbjct: 1664 YSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 1754



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 1747



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1739



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1732



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1725



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690

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>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RPB1) (Fragment)
          Length = 467

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = -2

Query: 251 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 75
           S  G  P+     P+   ++ T         N  PT+  +   +P  SP S S+S +  S
Sbjct: 101 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 160

Query: 74  VLPTSLAYIVPLARGCSPWRP 12
             PTS +Y  P +   SP  P
Sbjct: 161 YSPTSPSY-SPTSPSYSPTSP 180



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 205 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPNYSPTSPN 251



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRPD 9
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P+
Sbjct: 198 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSPN 244



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 191 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 236



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 184 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 229



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 177 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 222



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 170 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 215



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 163 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 208



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 156 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 201



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 149 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 194



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 142 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 187

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>ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex subunit ASH2|
           (ASH2-like protein)
          Length = 623

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +1

Query: 109 GLGSGVPA-PNPSAVGGXXXXXXXXXXVAACRPGDGPGIAPSGAFP---EHETVDSELVR 276
           G G GV A P P A               A   G+GP  AP GA P   E E+ D+ LV 
Sbjct: 7   GPGPGVSAGPGPGAAASATTAEDRETEPVAAGAGEGPSAAP-GAEPSSGEAESGDANLVD 65

Query: 277 TRGI 288
             G+
Sbjct: 66  VSGL 69

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>NIPBL_HUMAN (Q6KC79) Nipped-B-like protein (Delangin) (SCC2 homolog)|
          Length = 2804

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -3

Query: 451  MTRHLATLRES*LLPPFTRAWLNFFTLTFRALGRNHIASASARTIAMLCFN*TVGFPLSV 272
            + R+LA++R      PF +++  + T   R LG N IA    RT AM C +  V    S 
Sbjct: 1756 IVRYLASMR------PFAQSFDIYLTQILRVLGENAIA---VRTKAMKCLSEVVAVDPS- 1805

Query: 271  PVLSRLFHARG 239
             +L+RL   RG
Sbjct: 1806 -ILARLDMQRG 1815

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>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -2

Query: 260 STVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNP--PTADGFGAGTPEPSP 108
           +TV+ +G    GA P P+PG  AAT          P   T D    G P P P
Sbjct: 384 TTVTMTGN---GARPPPAPGAEAATPGSAQATSLPPSSTTVDSSTEGAPPPGP 433

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>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)|
          Length = 2798

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -3

Query: 451  MTRHLATLRES*LLPPFTRAWLNFFTLTFRALGRNHIASASARTIAMLCFN*TVGFPLSV 272
            + R+LA++R      PF +++  + T   R LG N IA    RT AM C +  V    S 
Sbjct: 1750 IVRYLASMR------PFAQSFDIYLTQILRVLGENAIA---VRTKAMKCLSEVVAVDPS- 1799

Query: 271  PVLSRLFHARG 239
             +L+RL   RG
Sbjct: 1800 -ILARLDMQRG 1809

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>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1745

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = -2

Query: 254  VSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYG 78
            VS  G +P      P SP     +        S  PT+  +   +P  SP S S+S +  
Sbjct: 1540 VSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599

Query: 77   SVLPTSLAYIVPLARGCSPWRP 12
            S  PTS +Y  P +   SP  P
Sbjct: 1600 SYSPTSPSY-SPTSPSYSPTSP 1620



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1718



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1711



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1704



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1697



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1690



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1683



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1631 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1676



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1624 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1669



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1617 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1662



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1610 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1655



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1603 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1648



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1596 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1641



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1589 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1634



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1627

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>ADCY9_XENLA (P98999) Adenylate cyclase type 9 (EC 4.6.1.1) (Adenylate cyclase|
           type IX) (ATP pyrophosphate-lyase 9) (Adenylyl cyclase
           9) (xlAC)
          Length = 1305

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 131 PRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQSTQNWY 274
           P  R   +  SSCS GESG  + G G+      ++L    ++ST NW+
Sbjct: 38  PSRRCKYSISSSCSSGESGVKKTG-GSGGARRQKKLPQLFERSTSNWW 84

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>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1852

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = -2

Query: 245  SGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLP 66
            S  +P  +   P+ G+   +        S  PT+  +   +P  SP S S+S +  S  P
Sbjct: 1590 SPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649

Query: 65   TSLAYIVPLARGCSPWRP 12
            TS +Y  P +   SP  P
Sbjct: 1650 TSPSY-SPSSPSYSPSSP 1666



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 25/91 (27%), Positives = 35/91 (38%)
 Frame = -2

Query: 284  PLVRTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 105
            P    + +S VS S      +    SP     +        S  PT+  +   +P  SP 
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1657

Query: 104  SQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            S S+S S  S  P+S  Y  P +   SP  P
Sbjct: 1658 SPSYSPSSPSYSPSSPRY-SPTSPTYSPTSP 1687

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>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29)
          Length = 241

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = -2

Query: 242 GKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGT-PEPSPQSQSFSRSYGSVLP 66
           G+AP G  P P PG H A         + P      GAG  P  SP S S         P
Sbjct: 54  GQAPPG--PYPGPGAHGAYPGQPGGPGAYPSPGQPSGAGAYPGASPYSASAG-------P 104

Query: 65  TSLAYIVPLARGCSP 21
             + Y +PL  G  P
Sbjct: 105 LPVPYDLPLPGGVMP 119

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>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -2

Query: 218 PGPSPGRHAATXXXXXXXXSNPPTA---DGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYI 48
           PGP+PG  +A         + PPT+    G G G P P+P     S   G+  PT  +  
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG-PTPTPPPAVTSAPPGAPPPTPPSSG 173

Query: 47  VP 42
           VP
Sbjct: 174 VP 175

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>VE2_HPV08 (P06422) Regulatory protein E2|
          Length = 498

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
 Frame = +2

Query: 56  QGKSAKRIRNFGK----RIGSEDWARGSRPRTR---RLLADCSSCSRGESGSPRAGRGTD 214
           + +S  R+R  G     R  S    +  RPR+R   R  A  +S  R   GSPR  R T 
Sbjct: 274 RSRSLSRVRAVGSTTVSRSRSSSLTKAVRPRSRSRSRGRATATSRRRAGRGSPRRRRSTS 333

Query: 215 RESPLRELSPSMKQSTQNWYGQG 283
           R         S +   +   G+G
Sbjct: 334 RSPSTNTFKRSQRGGGRRGRGRG 356

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>LEG3_CRILO (P47953) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29) (CBP30)
          Length = 244

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -2

Query: 242 GKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLP 66
           G+AP GA PGP +PG +              P A G     P   P +  +    G++  
Sbjct: 54  GQAPPGAYPGPTAPGAYPGP---APGAYPGQPGASGAYPSAPGAYPAAGPYGAPTGAL-- 108

Query: 65  TSLAYIVPLARGCSP 21
            ++ Y +PLA G  P
Sbjct: 109 -TVPYKLPLAGGVMP 122

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>ATPG_CAUCR (Q9A2V8) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 291

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = +2

Query: 8   HQVSKVNSLWPMEQCRQGKSAKRIRNFGKRIGSEDWARGSRPRTRRLLADCSSCSRGES- 184
           +++S V +   + +  Q  +A ++R       S+D A  +RP  RRL +  ++ + G S 
Sbjct: 9   NRISSVKATQKITKAMQMVAAAKLRR------SQDAAESARPYARRLASVIANLAAGVSG 62

Query: 185 -GSPRAGRGTDRE 220
            G+P+   GT R+
Sbjct: 63  DGAPKLLAGTGRD 75

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>DCP2_ASHGO (Q75BK1) mRNA decapping enzyme 2 (EC 3.-.-.-)|
          Length = 880

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/60 (35%), Positives = 23/60 (38%)
 Frame = -2

Query: 284 PLVRTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 105
           PLV +  ES  S S  AP    P PS     +            P A G  AG P P PQ
Sbjct: 287 PLVFSDDESQASISTSAPTTVPPAPSTANSQSV----------QPIAAGAYAGYPFPFPQ 336

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>ORC4_SCHPO (Q9Y794) Origin recognition complex subunit 4|
          Length = 972

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 101 GSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQST 262
           GSE   +  R R  ++ +   S    +   P+ GRG  R  PL  + PS+ + T
Sbjct: 117 GSEPIIKRKRGRPPKIKSSSPSTKLDDPLKPKRGRGRPRLHPLPVVQPSVDEGT 170

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>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = -2

Query: 236  APEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSL 57
            AP  + P   P +   +        + PP A     G P P+  + + +  + S    S+
Sbjct: 1101 APTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSM 1160

Query: 56   AY--IVPLARGCSPWRPDAV 3
             Y  + P A+  SP  P  V
Sbjct: 1161 TYSLVAPKAQRPSPKAPQKV 1180

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>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = +2

Query: 89  GKRIGSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMK 253
           G   GS+   R      R      SS SR  SGSPR+ R    ES   +LS S +
Sbjct: 28  GSAPGSQRSRRSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSGSAR 82

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>DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)|
          Length = 623

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 42  WNNVGKGSRQNGSVTSGKGLALRTGLGGPGPEP 140
           W   G+G R  G + +G G +    + G  P P
Sbjct: 259 WGRTGEGMRSTGGIRNGSGFSRSQSVPGAAPYP 291

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>MEI9_DROME (Q24087) Protein mei-9 (Protein meiotic 9)|
          Length = 961

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 171 EQLEQSANSRRVRGRDPRAQSSEPILFPKLRIRFADFPCL 52
           E  +++A SR+  G+ P+A    P +   +R   +D PCL
Sbjct: 673 EPTDENAKSRQAGGQAPQATKETPKVIVDMREFRSDLPCL 712

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>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = -2

Query: 233 PEGAIPGPSPGRHAATXXXXXXXXS-----NPPTADGFGAGTPEPSPQSQSFSRSYGSVL 69
           PE   P P+PG  AAT        S      PP A    A  P+P+PQ    + S GS  
Sbjct: 29  PEPQQPPPAPGPGAATASAATSAASPGPERRPPPAQ---APAPQPAPQPAP-TPSVGSSF 84

Query: 68  PTSLAYIV 45
            +SL+  V
Sbjct: 85  FSSLSQAV 92

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>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1599

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLA 36
            PT+  +   +P  SP S S+S +  S  PTS +Y V ++
Sbjct: 1538 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1524 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1569



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1517 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1562



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1510 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1555



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1503 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1548



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1496 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1541



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1534



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1482 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1527



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1475 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1520



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152  PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
            PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 1468 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 1513

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>PRA_MYCLE (P41484) Proline-rich antigen (36 kDa antigen)|
          Length = 249

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
 Frame = -2

Query: 251 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSF------S 90
           S S   P    PG S G   +           PPTA   G   P P P   S+       
Sbjct: 8   SGSNPTPAPPPPGSSGGYEPSFAPSELGSAYPPPTAPPVGGSYPPPPPPGGSYPPPPPPG 67

Query: 89  RSYGSVLPTSLAYIVP 42
            SY    P++ AY  P
Sbjct: 68  GSYPPPPPSTGAYAPP 83

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>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (Fragment)
          Length = 902

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 814 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 859



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 807 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 852



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 800 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 845



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 793 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 838



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 786 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 831



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 779 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 824



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 152 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLARGCSPWRP 12
           PT+  +   +P  SP S S+S +  S  PTS +Y  P +   SP  P
Sbjct: 730 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-SPTSPSYSPTSP 775

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>ATPBM_ARATH (P83483) ATP synthase beta chain 1, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 556

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = -2

Query: 281 LVRTSS-ESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 105
           L+R+SS  S      + P   +P PSP RHAA         +   T+    +  P  +P 
Sbjct: 10  LLRSSSGRSAAKLGNRNPR--LPSPSPARHAAPCSYLLGRVAEYATSSPASSAAPSSAPA 67

Query: 104 SQSFSRSY 81
                ++Y
Sbjct: 68  KDEGKKTY 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,429,664
Number of Sequences: 219361
Number of extensions: 1629548
Number of successful extensions: 5898
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 5154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5813
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result