ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 434 bits (219), Expect = e-118 Identities = 355/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggagagggagccgccgcagccatgggtcgcgtccgca 60 |||||||||||| |||||||||||||||| ||||||||||||||||| || | Sbjct: 13815441 ccgccgccgccgtcgccggagaaggagagg-------agcagccatgggtcgcgtgcgga 13815493 Query: 61 ccaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgaccc 120 ||||||| |||||||||||||| | ||||| |||||||||||||| || |||||||| | Sbjct: 13815494 ccaagacggtgaagaagacctcgaggcaggtgatcgagaagtactactcgcggatgacgc 13815553 Query: 121 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgcc 180 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct: 13815554 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcctgccgtcgaagcggc 13815613 Query: 181 tccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggccccg 240 | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 13815614 tgcgcaacaaggtggccgggttcaccacccacctgatgcgccgcatccagcgcgggcccg 13815673 Query: 241 tccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttcgtcc 300 | || |||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 13815674 tgcggggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatggacttcgtcc 13815733 Query: 301 ctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaaggagacgatggacatgc 360 | ||||||||||| || ||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 13815734 cggagaagtcggcgctcgaggtggaggagatccgcgtcgacaaggagaccatggagatgc 13815793 Query: 361 tggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 | || |||||||||||||| ||||| |||||||||||| Sbjct: 13815794 tcgccgcgctcggcatggccgacctccccggcgtcgagcgc 13815834 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 22632792 cgccgccgccgctgccggagaag 22632814 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaag 24 ||||||||||||| |||||||||| Sbjct: 21162879 ccgccgccgccgccgccggagaag 21162856
>gb|AC027659.1| Oryza sativa (japonica cultivar-group) BAC nbxb0015J03 chromosome 10, complete sequence Length = 172742 Score = 434 bits (219), Expect = e-118 Identities = 355/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggagagggagccgccgcagccatgggtcgcgtccgca 60 |||||||||||| |||||||||||||||| ||||||||||||||||| || | Sbjct: 141970 ccgccgccgccgtcgccggagaaggagagg-------agcagccatgggtcgcgtgcgga 142022 Query: 61 ccaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgaccc 120 ||||||| |||||||||||||| | ||||| |||||||||||||| || |||||||| | Sbjct: 142023 ccaagacggtgaagaagacctcgaggcaggtgatcgagaagtactactcgcggatgacgc 142082 Query: 121 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgcc 180 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct: 142083 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcctgccgtcgaagcggc 142142 Query: 181 tccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggccccg 240 | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 142143 tgcgcaacaaggtggccgggttcaccacccacctgatgcgccgcatccagcgcgggcccg 142202 Query: 241 tccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttcgtcc 300 | || |||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142203 tgcggggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatggacttcgtcc 142262 Query: 301 ctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaaggagacgatggacatgc 360 | ||||||||||| || ||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 142263 cggagaagtcggcgctcgaggtggaggagatccgcgtcgacaaggagaccatggagatgc 142322 Query: 361 tggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 | || |||||||||||||| ||||| |||||||||||| Sbjct: 142323 tcgccgcgctcggcatggccgacctccccggcgtcgagcgc 142363
>gb|AY109334.1| Zea mays CL3259_2 mRNA sequence Length = 1585 Score = 434 bits (219), Expect = e-118 Identities = 324/359 (90%) Strand = Plus / Minus Query: 43 ccatgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagt 102 ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct: 663 ccatgggtcgcgtccgcaccaagaccgtgaagaagacctccaggcaggtgatcgagaagt 604 Query: 103 actattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtcca 162 |||| || || |||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 603 actactcccgcatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtctcga 544 Query: 163 tcttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgcc 222 | ||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct: 543 ttctgccctcgaagcgcctccgcaacaaggtggctggcttcagtacccacctgatgcgcc 484 Query: 223 gcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaac 282 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | Sbjct: 483 gcatccagcgcggcccagtccgcggcatctcgctcaagctgcaggaggaggagcgcgagc 424 Query: 283 gccgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgaca 342 |||||||||||||||| || |||||||| || || |||||||| |||||||||||||||| Sbjct: 423 gccgcatggacttcgtgccggagaagtccgcgctcgaggtcgaagagatccgcgtcgaca 364 Query: 343 aggagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 ||||||| ||||| ||||| || ||||||||||||||| || || ||||| |||||| Sbjct: 363 aggagaccatggagatgctcgctgccctcggcatggccgacctgcccggcgttgagcgc 305
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 434 bits (219), Expect = e-118 Identities = 355/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggagagggagccgccgcagccatgggtcgcgtccgca 60 |||||||||||| |||||||||||||||| ||||||||||||||||| || | Sbjct: 13822783 ccgccgccgccgtcgccggagaaggagagg-------agcagccatgggtcgcgtgcgga 13822835 Query: 61 ccaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgaccc 120 ||||||| |||||||||||||| | ||||| |||||||||||||| || |||||||| | Sbjct: 13822836 ccaagacggtgaagaagacctcgaggcaggtgatcgagaagtactactcgcggatgacgc 13822895 Query: 121 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgcc 180 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct: 13822896 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcctgccgtcgaagcggc 13822955 Query: 181 tccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggccccg 240 | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 13822956 tgcgcaacaaggtggccgggttcaccacccacctgatgcgccgcatccagcgcgggcccg 13823015 Query: 241 tccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttcgtcc 300 | || |||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 13823016 tgcggggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatggacttcgtcc 13823075 Query: 301 ctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaaggagacgatggacatgc 360 | ||||||||||| || ||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 13823076 cggagaagtcggcgctcgaggtggaggagatccgcgtcgacaaggagaccatggagatgc 13823135 Query: 361 tggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 | || |||||||||||||| ||||| |||||||||||| Sbjct: 13823136 tcgccgcgctcggcatggccgacctccccggcgtcgagcgc 13823176 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 22645260 cgccgccgccgctgccggagaag 22645282 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaag 24 ||||||||||||| |||||||||| Sbjct: 21174143 ccgccgccgccgccgccggagaag 21174120
>gb|BT018883.1| Zea mays clone EL01T0205A07.d mRNA sequence Length = 1280 Score = 426 bits (215), Expect = e-116 Identities = 323/359 (89%) Strand = Plus / Plus Query: 43 ccatgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagt 102 ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct: 656 ccatgggtcgcgtccgcaccaagaccgtgaagaagacctccaggcaggtgatcgagaagt 715 Query: 103 actattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtcca 162 |||| || || |||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 716 actactcccgcatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtctcga 775 Query: 163 tcttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgcc 222 | ||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||| Sbjct: 776 ttctgccctcgaagcgcctccgcaacaaggtggctggcttcagtacccacctgatgcgcc 835 Query: 223 gcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaac 282 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | Sbjct: 836 gcatccagcgcggcccagtccgcggcatctcgctcaagctgcaggaggaggagcgcgagc 895 Query: 283 gccgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgaca 342 |||||| ||||||||| || |||||||| || || |||||||| |||||||||||||||| Sbjct: 896 gccgcagggacttcgtgccggagaagtccgcgctcgaggtcgaagagatccgcgtcgaca 955 Query: 343 aggagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 ||||||| ||||| ||||| || ||||||||||||||| || || ||||| |||||| Sbjct: 956 aggagaccatggagatgctcgctgccctcggcatggccgacctgcccggcgttgagcgc 1014
>dbj|AK059434.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F09, full insert sequence Length = 736 Score = 426 bits (215), Expect = e-116 Identities = 354/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggagagggagccgccgcagccatgggtcgcgtccgca 60 |||||||||||| |||||||||||||||| ||||||||||||||||| || | Sbjct: 61 ccgccgccgccgtcgccggagaaggagagg-------agcagccatgggtcgcgtgcgga 113 Query: 61 ccaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgaccc 120 ||||||| |||||||||||||| | ||||| |||||||||||||| || |||||||| | Sbjct: 114 ccaagacggtgaagaagacctcgaggcaggtgatcgagaagtactactcgcggatgacgc 173 Query: 121 tcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgcc 180 |||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| | Sbjct: 174 tcgacttccacaccaacaagaaggtgttcgaggaggtgtccatcctgccgtcgaagcggc 233 Query: 181 tccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggccccg 240 | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 234 tgcgcaacaaggtggccgggttcaccacccacctgatgcgccgcatccagcgcgggcccg 293 Query: 241 tccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttcgtcc 300 | || |||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 294 tgcggggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatggacttcgtcc 353 Query: 301 ctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaaggagacgatggacatgc 360 | ||||||||||| || ||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 354 cggagaagtcggcgctcgaggtggaggagatccgcgtcgacaaggagaccatggagatgc 413 Query: 361 tggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 | || |||||||||||||| ||||| |||||||||||| Sbjct: 414 tcgccgcgctcggcatggccgacctccccggcgtcgagcgc 454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Minus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| ||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 538166 catggggcgcgtgcgcacgaagacggtgaagaagacgtctcggcaggtgatcgagaagta 538107 Query: 104 ctattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtccat 163 ||| || ||||||||||| ||||||||||| |||||||||||||| ||||||||||| || Sbjct: 538106 ctactcgcggatgaccctggacttccacacgaacaagaaggtgctggaggaggtgtcgat 538047 Query: 164 cttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccg 223 | ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 538046 cctgccgtcgaagcgcctccgcaacaaggtggccggcttcagcacccacctgatgcgccg 537987 Query: 224 catccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacg 283 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 537986 catccagcgcggccccgtccgcggcatctccctcaagctccaggaggaggagcgcgagcg 537927 Query: 284 ccgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaa 343 |||||||||||||||||| || | |||||| || ||||||||||| |||||||||||||| Sbjct: 537926 ccgcatggacttcgtcccggacaggtcggcgctcgaggtcgacgacatccgcgtcgacaa 537867 Query: 344 ggagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 |||||| | |||||||| | | ||||||||||||||| ||||| ||||||| |||| Sbjct: 537866 ggagaccctcgacatgctcacctccctcggcatggccgacctccccggcgtcgtgcgc 537809 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggag 21 ||||||||||||||||||||| Sbjct: 22844652 ccgccgccgccgctgccggag 22844672
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Minus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| ||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 538164 catggggcgcgtgcgcacgaagacggtgaagaagacgtctcggcaggtgatcgagaagta 538105 Query: 104 ctattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtccat 163 ||| || ||||||||||| ||||||||||| |||||||||||||| ||||||||||| || Sbjct: 538104 ctactcgcggatgaccctggacttccacacgaacaagaaggtgctggaggaggtgtcgat 538045 Query: 164 cttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccg 223 | ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 538044 cctgccgtcgaagcgcctccgcaacaaggtggccggcttcagcacccacctgatgcgccg 537985 Query: 224 catccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacg 283 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 537984 catccagcgcggccccgtccgcggcatctccctcaagctccaggaggaggagcgcgagcg 537925 Query: 284 ccgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaa 343 |||||||||||||||||| || | |||||| || ||||||||||| |||||||||||||| Sbjct: 537924 ccgcatggacttcgtcccggacaggtcggcgctcgaggtcgacgacatccgcgtcgacaa 537865 Query: 344 ggagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 |||||| | |||||||| | | ||||||||||||||| ||||| ||||||| |||| Sbjct: 537864 ggagaccctcgacatgctcacctccctcggcatggccgacctccccggcgtcgtgcgc 537807 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggag 21 ||||||||||||||||||||| Sbjct: 22837680 ccgccgccgccgctgccggag 22837700
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 424 bits (214), Expect = e-115 Identities = 322/358 (89%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| ||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 77752 catggggcgcgtgcgcacgaagacggtgaagaagacgtctcggcaggtgatcgagaagta 77811 Query: 104 ctattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtccat 163 ||| || ||||||||||| ||||||||||| |||||||||||||| ||||||||||| || Sbjct: 77812 ctactcgcggatgaccctggacttccacacgaacaagaaggtgctggaggaggtgtcgat 77871 Query: 164 cttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccg 223 | ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 77872 cctgccgtcgaagcgcctccgcaacaaggtggccggcttcagcacccacctgatgcgccg 77931 Query: 224 catccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacg 283 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 77932 catccagcgcggccccgtccgcggcatctccctcaagctccaggaggaggagcgcgagcg 77991 Query: 284 ccgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaa 343 |||||||||||||||||| || | |||||| || ||||||||||| |||||||||||||| Sbjct: 77992 ccgcatggacttcgtcccggacaggtcggcgctcgaggtcgacgacatccgcgtcgacaa 78051 Query: 344 ggagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 |||||| | |||||||| | | ||||||||||||||| ||||| ||||||| |||| Sbjct: 78052 ggagaccctcgacatgctcacctccctcggcatggccgacctccccggcgtcgtgcgc 78109
>ref|XM_468565.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 435 Score = 422 bits (213), Expect = e-115 Identities = 321/357 (89%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 ||||| ||||| ||||| ||||| ||||||||||| || || ||||| |||||||||||| Sbjct: 1 atggggcgcgtgcgcacgaagacggtgaagaagacgtctcggcaggtgatcgagaagtac 60 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatc 164 || || ||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 61 tactcgcggatgaccctggacttccacacgaacaagaaggtgctggaggaggtgtcgatc 120 Query: 165 ttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgc 224 ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 121 ctgccgtcgaagcgcctccgcaacaaggtggccggcttcagcacccacctgatgcgccgc 180 Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgc 284 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 181 atccagcgcggccccgtccgcggcatctccctcaagctccaggaggaggagcgcgagcgc 240 Query: 285 cgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaag 344 ||||||||||||||||| || | |||||| || ||||||||||| ||||||||||||||| Sbjct: 241 cgcatggacttcgtcccggacaggtcggcgctcgaggtcgacgacatccgcgtcgacaag 300 Query: 345 gagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 ||||| | |||||||| | | ||||||||||||||| ||||| ||||||| |||| Sbjct: 301 gagaccctcgacatgctcacctccctcggcatggccgacctccccggcgtcgtgcgc 357
>ref|NM_196466.1| Oryza sativa (japonica cultivar-group) contains similarity to 40S ribosomal protein S17 (OSJNBa0015J03.22), mRNA Length = 426 Score = 422 bits (213), Expect = e-115 Identities = 321/357 (89%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 ||||||||||| || |||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 1 atgggtcgcgtgcggaccaagacggtgaagaagacctcgaggcaggtgatcgagaagtac 60 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatc 164 || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tactcgcggatgacgctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatc 120 Query: 165 ttgcagtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgc 224 ||| ||||||||| || ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 ctgccgtcgaagcggctgcgcaacaaggtggccgggttcaccacccacctgatgcgccgc 180 Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgc 284 ||||||||||| ||||| || |||||||| || ||||||||||||||||||||||| ||| Sbjct: 181 atccagcgcgggcccgtgcggggcatctcgctgaagctgcaggaggaggagcgcgagcgc 240 Query: 285 cgcatggacttcgtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaag 344 ||||||||||||||||| ||||||||||| || ||||| || |||||||||||||||||| Sbjct: 241 cgcatggacttcgtcccggagaagtcggcgctcgaggtggaggagatccgcgtcgacaag 300 Query: 345 gagacgatggacatgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 ||||| ||||| ||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 301 gagaccatggagatgctcgccgcgctcggcatggccgacctccccggcgtcgagcgc 357
>gb|BT017440.1| Zea mays clone EL01N0404H05.c mRNA sequence Length = 511 Score = 295 bits (149), Expect = 6e-77 Identities = 207/225 (92%), Gaps = 1/225 (0%) Strand = Plus / Minus Query: 178 gcctccgcaacaaggtg-gccggcttcaccacccatctgatgcgccgcatccagcgcggc 236 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 511 gcctccgcaacaaggtgtgccggcttcaccacccatctgatgcgccgcatccagcggggc 452 Query: 237 cccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttc 296 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 451 cccgtccgtggcatctcgctcaagctgcaggaggaggagcgggagcgccgcatggacttc 392 Query: 297 gtccctgagaagtcggctcttgaggtcgacgagatccgcgtcgacaaggagacgatggac 356 ||||| |||||||| || || |||||||| ||||||||||||||||||||||| ||||| Sbjct: 391 gtcccggagaagtcagcgctcgaggtcgaagagatccgcgtcgacaaggagaccatggag 332 Query: 357 atgctggcgttcctcggcatggccgatctccctggcgtcgagcgc 401 ||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 331 atgctggcggcactcggcatggccgatctcccgggcgtagagcgc 287
>ref|XM_956742.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S17 (CRP3) (NCU07014.1) partial mRNA Length = 441 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgc 233 |||||||||||||||||| | ||||||| ||||||||| ||||| || |||||||| Sbjct: 130 aagcgcctccgcaacaagattgccggctacaccacccacttgatgaagcgtatccagcgt 189 Query: 234 ggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 190 ggccccgtccgcggtatctccttcaagctgcaggaggaggagcg 233
>ref|XM_327299.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S17 (CRP3) (NCU07014.1) partial mRNA Length = 441 Score = 111 bits (56), Expect = 2e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgc 233 |||||||||||||||||| | ||||||| ||||||||| ||||| || |||||||| Sbjct: 130 aagcgcctccgcaacaagattgccggctacaccacccacttgatgaagcgtatccagcgt 189 Query: 234 ggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 190 ggccccgtccgcggtatctccttcaagctgcaggaggaggagcg 233
>ref|XM_809649.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S17 (Tc00.1047053508827.70) partial mRNA Length = 591 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 231 cgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatg 290 |||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 352 cgcggccccgtccgtggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatg 411 Query: 291 gact 294 |||| Sbjct: 412 gact 415
>ref|NM_001036758.1| Arabidopsis thaliana structural constituent of ribosome AT5G04800 transcript variant AT5G04800.4 mRNA, complete cds Length = 822 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 189 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 248 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 249 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 308 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 309 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 368 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 369 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 424
>ref|NM_120562.2| Arabidopsis thaliana structural constituent of ribosome AT5G04800 transcript variant AT5G04800.1 mRNA, complete cds Length = 745 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 129 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 188 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 189 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 248 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 249 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 308 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 309 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 364
>ref|NM_001036757.1| Arabidopsis thaliana structural constituent of ribosome AT5G04800 transcript variant AT5G04800.3 mRNA, complete cds Length = 768 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 135 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 194 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 195 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 254 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 255 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 314 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 315 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 370
>ref|NM_180434.1| Arabidopsis thaliana structural constituent of ribosome AT5G04800 transcript variant AT5G04800.2 mRNA, complete cds Length = 751 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 135 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 194 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 195 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 254 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 255 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 314 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 315 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 370
>ref|XM_809656.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S17 (Tc00.1047053508827.79) partial mRNA Length = 426 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 231 cgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatg 290 |||||||| ||||| |||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 187 cgcggccctgtccgtggcatctcgctgaagctgcaggaggaggagcgcgagcgccgcatg 246 Query: 291 gact 294 |||| Sbjct: 247 gact 250
>gb|BT000851.1| Arabidopsis thaliana At5g04800/MUK11_12 mRNA, complete cds Length = 426 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 16 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 75 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 76 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 135 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 136 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 195 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 196 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 251
>emb|AL162972.1|ATT1E3 Arabidopsis thaliana DNA chromosome 5, BAC clone T1E3 (ESSA project) Length = 83485 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 79145 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 79204 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 79205 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 79264 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 79265 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 79324 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 79325 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 79380
>gb|AF361843.1| Arabidopsis thaliana AT5g04800/MUK11_12 mRNA, complete cds Length = 723 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 134 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 193 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 194 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 253 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 254 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 313 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 314 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 369
>gb|AY087862.1| Arabidopsis thaliana clone 39018 mRNA, complete sequence Length = 718 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 129 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 188 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 189 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 248 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 249 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 308 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 309 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 364
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 87.7 bits (44), Expect = 3e-14 Identities = 188/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 36758 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 36817 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 36818 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 36877 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 36878 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 36937 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 36938 gtccgtggaatctcactcaagcttcaggaagaggagcgtgaacgccgcatggactt 36993
>gb|M63879.1|NEUCRP3 Neurospora crassa ribosomal protein gene, complete cds Length = 1714 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 195 gccggcttcaccacccatctgatgcgccgcatccagcgcggccccgtccgcggcatctcc 254 ||||||| ||||||||| ||||| || |||||||| |||||||||||||| |||||| Sbjct: 1112 gccggctacaccacccacttgatgaagcgtatccagcgtggccccgtccgcggtatctcc 1171 Query: 255 ctcaagctgcaggaggaggagcg 277 |||||||||||||||||||||| Sbjct: 1172 ttcaagctgcaggaggaggagcg 1194 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtg 194 ||||||||||||||||||||| Sbjct: 998 aagcgcctccgcaacaaggtg 1018
>emb|BX829605.1|CNS0A03W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1247 Score = 79.8 bits (40), Expect = 7e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct: 709 accaagactgtgaagaaatcttctcgtcaagtcatcgagaagtactactctcgcatgact 768 Query: 120 ctcgacttccacaccaacaagaaggtgctcgaggaggtgtccatcttgcagtcgaagcgc 179 || ||||||||||| |||||||| | || || ||||| ||||| | | || ||| | Sbjct: 769 cttgacttccacactaacaagaaaatccttgaagaggttgccatcatcccttcaaagaga 828 Query: 180 ctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgcggcccc 239 |||||||||||| | || || ||| ||||||| ||||| || |||||| || || Sbjct: 829 ctccgcaacaagattgctggattctccacccacttgatgaaacgtatccagaagggacca 888 Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||| |||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 889 gtccgtggaatcttactcaagcttcaggaagaggagcgtgaacgccgcatggactt 944
>gb|DQ200384.1| Solanum tuberosum clone 063D01 40S ribosomal protein S17-like protein mRNA, complete cds Length = 701 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || ||||||||||||||||||||| | ||| ||||||| || |||| |||| Sbjct: 57 atgggtcgtgtacgcaccaagaccgtgaagaagtcttccagacaggtaattgagaggtac 116 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || ||||||| | || |||||||||||||||||| Sbjct: 117 tactccaagatgaccttggatttccacaccaacaagaag 155
>ref|XM_750270.1| Aspergillus fumigatus Af293 ribosomal protein S17 crp3 (Afu2g10300) partial mRNA Length = 639 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgc 233 |||||||| ||||||||| | || || | ||||||||| || ||| || |||||||| Sbjct: 307 aagcgccttcgcaacaagattgctggttacaccacccaccttatgaagcgtatccagcgt 366 Query: 234 ggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct: 367 ggccctgtccgcggtatctctttcaagctgcaggaggaggagcg 410
>ref|NM_111897.2| Arabidopsis thaliana structural constituent of ribosome AT3G10610 mRNA, complete cds Length = 771 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 81 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 140 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 141 tactcacggatgacactagacttccacaccaacaagaag 179 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 276 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 331
>ref|XM_361640.1| Magnaporthe grisea 70-15 hypothetical protein (MG04114.4) partial mRNA Length = 447 Score = 69.9 bits (35), Expect = 6e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 171 tcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccag 230 ||||||||||| ||||||||| | ||||| | ||||||||| ||||| || || ||| Sbjct: 127 tcgaagcgcctgcgcaacaagattgccggttacaccacccacttgatgaagcgtattcag 186 Query: 231 cgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 || || |||||||| || |||||| ||||||| |||||||||||||| Sbjct: 187 cgtggtcccgtccgtggtatctccttcaagcttcaggaggaggagcg 233 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||| |||||||||||||| |||||| Sbjct: 1 atgggtcgcgttcgcaccaagaccgtcaagaag 33
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence, complete sequence Length = 93985 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 76619 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 76678 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 76679 tactcacggatgacactagacttccacaccaacaagaag 76717 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 76814 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 76869
>emb|AM048971.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein S17e (rpS17e gene) Length = 396 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||||||||| |||||||||||||| ||| | ||| | | |||||||||||||| Sbjct: 1 atgggtcgcgtccgaaccaagaccgtgaaaaaggcatccaaagtgatcatcgagaagtac 60 Query: 105 tattctcggatgaccctcgacttccacaccaacaa 139 || | || ||||||| ||||||||||||||||| Sbjct: 61 tacaccaggttgaccctggacttccacaccaacaa 95
>gb|AY091313.1| Arabidopsis thaliana putative 40S ribosomal protein S17 (At3g10610) mRNA, complete cds Length = 454 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 1 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 60 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 61 tactcacggatgacactagacttccacaccaacaagaag 99 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 196 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 251
>gb|AY063881.1| Arabidopsis thaliana putative 40S ribosomal protein S17 (At3g10610) mRNA, complete cds Length = 655 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 81 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 140 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 141 tactcacggatgacactagacttccacaccaacaagaag 179 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 276 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 331
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 27898 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 27839 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 27838 tactcacggatgacactagacttccacaccaacaagaag 27800 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 27703 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 27648
>gb|AY088250.1| Arabidopsis thaliana clone 4775 mRNA, complete sequence Length = 740 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || || ||||| || || |||||| | || || ||||| || ||||||||| Sbjct: 95 atgggtcgtgttcgtaccaaaacggttaagaagtcttcacgtcaggtgattgagaagtac 154 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || |||||||| || ||||||||||||||||||||| Sbjct: 155 tactcacggatgacactagacttccacaccaacaagaag 193 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggactt 295 ||||| || |||||||||||||| || ||||| ||||| ||| | || |||||||| Sbjct: 290 gtccgtggaatctccctcaagctacaagaggaagagcgtgaaaggcgaatggactt 345
>emb|BX930857.2| Gallus gallus finished cDNA, clone ChEST970j5 Length = 472 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| ||||||||||| || |||||| | |||||||||||||||||| Sbjct: 202 cgcatccagcggggccccgtccggggtatctccattaagctgcaggaggaggag 255 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 33 gccgccgcagccatgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 13 gccgccgcagccatgggacgcgtgaggacgaagacggtgaagaag 57
>ref|NM_204217.1| Gallus gallus ribosomal protein S17 (RPS17), mRNA Length = 485 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| ||||||||||| || |||||| | |||||||||||||||||| Sbjct: 215 cgcatccagcggggccccgtccggggtatctccattaagctgcaggaggaggag 268 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 33 gccgccgcagccatgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 26 gccgccgcagccatgggacgcgtgaggacgaagacggtgaagaag 70
>emb|BX933819.1| Gallus gallus finished cDNA, clone ChEST38m20 Length = 707 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| ||||||||||| || |||||| | |||||||||||||||||| Sbjct: 437 cgcatccagcggggccccgtccggggtatctccattaagctgcaggaggaggag 490
>gb|AY215074.1| Gallus gallus ribosomal protein S17 mRNA, complete cds Length = 485 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| ||||||||||| || |||||| | |||||||||||||||||| Sbjct: 215 cgcatccagcggggccccgtccggggtatctccattaagctgcaggaggaggag 268 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 33 gccgccgcagccatgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 26 gccgccgcagccatgggacgcgtgaggacgaagacggtgaagaag 70
>emb|X07257.1|GGRPS17 Chicken mRNA for ribosomal protein S17 Length = 430 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| ||||||||||| || |||||| | |||||||||||||||||| Sbjct: 160 cgcatccagcggggccccgtccggggtatctccattaagctgcaggaggaggag 213
>ref|XM_658491.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S17 (AN5979.2), mRNA Length = 420 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||| ||||| |||||||| |||||| ||||||| |||||||||||||| Sbjct: 181 atccagcgtggccctgtccgcggtatctccttcaagctacaggaggaggagcg 233
>gb|DQ066305.1| Ixodes scapularis isolate IS-6-12L-68 ribosomal protein S17 mRNA, partial cds Length = 393 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| ||| | ||||| |||||||||||| | || || | |||||||||||||| Sbjct: 1 atgggtcgtgtcaggaccaaaaccgtgaagaaggcttcgcgcctcatcatcgagaagtac 60 Query: 105 tattctcggatgaccctcgacttccacaccaacaaga 141 || | ||| ||||||||||||||||||| ||||||| Sbjct: 61 tacacacggctgaccctcgacttccacacgaacaaga 97 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || ||||| || ||||||||| ||||||| ||||| |||||| Sbjct: 178 cgcatccagcgtggtcccgtgcgtggcatctccatcaagctccaggaagaggag 231
>ref|NM_126472.2| Arabidopsis thaliana structural constituent of ribosome AT2G04390 mRNA, complete cds Length = 662 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 ||||||||||||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 117 accaagaccgtgaagaaatcttctcgtcaagtcattgagaagtactactctcgcatgact 176 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 177 cttgactttcacactaacaagaag 200
>dbj|AB226307.1| Aspergillus oryzae cDNA, contig sequence: AoEST3169 Length = 860 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgc 233 |||||||| ||||||||| | ||||| | |||||| || ||||| || ||||||||| Sbjct: 182 aagcgcctgcgcaacaagattgccggatacaccactcacttgatgaagcgtatccagcgc 241 Query: 234 ggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 ||||| || || || |||||| ||||||| |||||||||||||| Sbjct: 242 ggccctgttcgtggtatctccttcaagctccaggaggaggagcg 285
>gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map RNS1, complete sequence Length = 99804 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 ||||||||||||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 74316 accaagaccgtgaagaaatcttctcgtcaagtcattgagaagtactactctcgcatgact 74257 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 74256 cttgactttcacactaacaagaag 74233
>gb|AY079105.1| Arabidopsis thaliana At2g04390/T1O3.20 mRNA, complete cds Length = 426 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 ||||||||||||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 16 accaagaccgtgaagaaatcttctcgtcaagtcattgagaagtactactctcgcatgact 75 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 76 cttgactttcacactaacaagaag 99
>gb|AF419568.1|AF419568 Arabidopsis thaliana At2g04390/T1O3.20 mRNA, complete cds Length = 638 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 ||||||||||||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 118 accaagaccgtgaagaaatcttctcgtcaagtcattgagaagtactactctcgcatgact 177 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 178 cttgactttcacactaacaagaag 201
>ref|NM_001013455.1| Danio rerio zgc:114188 (zgc:114188), mRNA Length = 490 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcga 280 ||||||||||| || ||| | || |||||| ||||||||||||||||||||||||| Sbjct: 202 atccagcgcgggccggtcagaggaatctccatcaagctgcaggaggaggagcgcga 257 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaaga 141 |||||||||||||||||||| Sbjct: 99 cgacttccacaccaacaaga 118
>gb|BC091562.1| Danio rerio zgc:114188, mRNA (cDNA clone MGC:114188 IMAGE:7431996), complete cds Length = 490 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcga 280 ||||||||||| || ||| | || |||||| ||||||||||||||||||||||||| Sbjct: 202 atccagcgcgggccggtcagaggaatctccatcaagctgcaggaggaggagcgcga 257 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaaga 141 |||||||||||||||||||| Sbjct: 99 cgacttccacaccaacaaga 118
>gb|AY496126.1| Capsicum annuum 40S ribosomal protein S17 mRNA, complete cds Length = 657 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || ||||||||||||||||||||| | || ||||||| || |||| |||| Sbjct: 74 atgggtcgtgtacgcaccaagaccgtgaagaagtcatcaagacaggtaattgagaggtac 133 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || ||||||| | || |||||||| ||||||||| Sbjct: 134 tactcgaagatgaccttggatttccacacgaacaagaag 172
>gb|AF161704.1|AF161704 Lycopersicon esculentum 40S ribosomal protein S17 (Gi1) mRNA, complete cds Length = 641 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtac 104 |||||||| || ||||||||||||||||||||| | || |||||||| || |||| |||| Sbjct: 48 atgggtcgtgtgcgcaccaagaccgtgaagaagtcatctcgacaggtaattgagaggtac 107 Query: 105 tattctcggatgaccctcgacttccacaccaacaagaag 143 || || ||||| | || |||||||||||||||||| Sbjct: 108 tactccaaaatgacattggatttccacaccaacaagaag 146
>emb|CR734206.2|CNS0GTAL Tetraodon nigroviridis full-length cDNA Length = 463 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 199 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 252
>emb|CR733885.2|CNS0GT1O Tetraodon nigroviridis full-length cDNA Length = 468 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 199 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 252
>emb|CR721645.2|CNS0GJRN Tetraodon nigroviridis full-length cDNA Length = 461 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR716561.2|CNS0GFUI Tetraodon nigroviridis full-length cDNA Length = 440 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 176 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 229
>emb|CR715007.2|CNS0GENF Tetraodon nigroviridis full-length cDNA Length = 510 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 239 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaaga 141 |||||||||||||||||||| Sbjct: 102 cgacttccacaccaacaaga 121
>emb|CR713801.2|CNS0GDPX Tetraodon nigroviridis full-length cDNA Length = 470 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 201 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 254
>emb|CR709441.2|CNS0GACT Tetraodon nigroviridis full-length cDNA Length = 471 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaaga 141 |||||||||||||||||||| Sbjct: 102 cgacttccacaccaacaaga 121
>emb|CR699586.2|CNS0G2R2 Tetraodon nigroviridis full-length cDNA Length = 468 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR697355.2|CNS0G113 Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR696871.2|CNS0G0NN Tetraodon nigroviridis full-length cDNA Length = 996 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 176 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 229
>emb|CR694883.2|CNS0FZ4F Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR688673.2|CNS0FUBX Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR687232.2|CNS0FT7W Tetraodon nigroviridis full-length cDNA Length = 468 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR684996.2|CNS0FRHS Tetraodon nigroviridis full-length cDNA Length = 993 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 176 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 229
>emb|CR678165.2|CNS0FM89 Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR674580.1|CNS0FJH6 Tetraodon nigroviridis full-length cDNA Length = 1404 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 917 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 970
>emb|CR663962.2|CNS0FBA8 Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR655202.2|CNS0F4IW Tetraodon nigroviridis full-length cDNA Length = 445 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 176 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 229
>emb|CR656244.2|CNS0F5BU Tetraodon nigroviridis full-length cDNA Length = 468 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR651538.2|CNS0F1P4 Tetraodon nigroviridis full-length cDNA Length = 466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 202 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 255
>emb|CR632947.2|CNS0ENCP Tetraodon nigroviridis full-length cDNA Length = 445 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | ||||||||| |||||||||||||||||||| Sbjct: 176 cgcatccagcgtggtccagtcaggggcatctccatcaagctgcaggaggaggag 229 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaaga 141 |||||||||||||||||||| Sbjct: 76 cgacttccacaccaacaaga 95
>ref|XM_751922.1| Ustilago maydis 521 hypothetical protein (UM00868.1) partial mRNA Length = 1200 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 201 ttcaccacccatctgatgcgccgcatccagcgcggccccgtccgcggcatctccctcaag 260 ||||||||||| || ||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 922 ttcaccacccaccttatgaagcgtatccagcgtggtcccgtccgcggtatctcgttcaag 981 Query: 261 ctgcaggaggaggagcg 277 || |||||||||||||| Sbjct: 982 cttcaggaggaggagcg 998
>gb|AF548334.1| Branchiostoma belcheri ribosomal protein S17 mRNA, complete cds Length = 614 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 207 acccatctgatgcgccgcatccagcgcggccccgtccgcggcatctccctcaagctgcag 266 |||||||||||| || |||||||| || || ||||| || |||||| ||||||||||| Sbjct: 171 acccatctgatgaagcgtatccagcgaggaccagtccgtggtatctccatcaagctgcag 230 Query: 267 gaggaggag 275 ||||||||| Sbjct: 231 gaggaggag 239
>dbj|AB224095.1| Aspergillus oryzae cDNA, contig sequence: AoEST0937 Length = 823 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||||||||| || || || |||||| ||||||| |||||||||||||| Sbjct: 293 atccagcgcggccctgttcgtggtatctccttcaagctccaggaggaggagcg 345
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||||||||| || || || |||||| ||||||| |||||||||||||| Sbjct: 272235 atccagcgcggccctgttcgtggtatctccttcaagctccaggaggaggagcg 272183
>ref|NM_126548.3| Arabidopsis thaliana structural constituent of ribosome AT2G05220 transcript variant AT2G05220.1 mRNA, complete cds Length = 716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 126 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 185 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 186 cttgactttcacactaacaagaag 209
>ref|NM_001036248.1| Arabidopsis thaliana structural constituent of ribosome AT2G05220 transcript variant AT2G05220.2 mRNA, complete cds Length = 730 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 125 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 184 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 185 cttgactttcacactaacaagaag 208
>ref|XM_385816.1| Gibberella zeae PH-1 chromosome 3 RS17_NEUCR 40S ribosomal protein S17 (CRP3) (FG05640.1) partial mRNA Length = 468 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 174 aagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatccagcgc 233 ||||| |||||||||||| | || || | ||||||||| ||||| || || ||||| Sbjct: 130 aagcgtctccgcaacaagattgctggttacaccacccacttgatgaagcgaattcagcgt 189 Query: 234 ggccccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 ||||| ||||| || |||||| ||||||| |||||||||||||| Sbjct: 190 ggccctgtccgtggtatctccttcaagcttcaggaggaggagcg 233 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||| || ||||||||||| |||||| Sbjct: 1 atgggtcgcgttcgtaccaagaccgtcaagaag 33
>gb|AY063098.1| Arabidopsis thaliana putative 40S ribosomal protein S17 (At2g05220) mRNA, complete cds Length = 454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 16 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 75 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 76 cttgactttcacactaacaagaag 99
>gb|AF370312.1| Arabidopsis thaliana putative 40S ribosomal protein S17 (At2g05220) mRNA, complete cds Length = 703 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 126 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 185 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 186 cttgactttcacactaacaagaag 209
>gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map RNS1, complete sequence Length = 124326 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 65767 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 65708 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 65707 cttgactttcacactaacaagaag 65684
>gb|BT006533.1| Arabidopsis thaliana At2g05220 gene, complete cds Length = 423 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 16 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 75 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 76 cttgactttcacactaacaagaag 99
>emb|BX819354.1|CNS0A9T1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 108 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 167 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 168 cttgactttcacactaacaagaag 191
>gb|AY088578.1| Arabidopsis thaliana clone 8051 mRNA, complete sequence Length = 682 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 124 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 183 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 184 cttgactttcacactaacaagaag 207
>gb|BT002068.1| Arabidopsis thaliana 40S ribosomal protein S17 (At2g05220) mRNA, complete cds Length = 700 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 |||||||| |||||||| | || || || ||||| ||||||||||| ||||| ||||| Sbjct: 123 accaagacggtgaagaaatcttcacgtcaagtcattgagaagtactactctcgcatgact 182 Query: 120 ctcgacttccacaccaacaagaag 143 || ||||| ||||| ||||||||| Sbjct: 183 cttgactttcacactaacaagaag 206
>gb|DQ213966.1| Taeniopygia guttata clone 0064P0014G08 ribosomal protein S17 variant 1-like mRNA, complete sequence Length = 489 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 |||||| | ||||| ||||||||||||||| |||| || |||||||||||| Sbjct: 203 atccagaggggccctgtccgcggcatctccatcaaactacaggaggaggag 253
>gb|DQ213965.1| Taeniopygia guttata clone 0061P0023H07 ribosomal protein S17 variant 1-like mRNA, complete sequence Length = 504 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 |||||| | ||||| ||||||||||||||| |||| || |||||||||||| Sbjct: 218 atccagaggggccctgtccgcggcatctccatcaaactacaggaggaggag 268
>gb|DQ213964.1| Taeniopygia guttata clone 0058P0046B02 ribosomal protein S17 variant 1-like mRNA, complete sequence Length = 503 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 |||||| | ||||| ||||||||||||||| |||| || |||||||||||| Sbjct: 218 atccagaggggccctgtccgcggcatctccatcaaactacaggaggaggag 268
>gb|DQ213963.1| Taeniopygia guttata clone 0058P0023E05 ribosomal protein S17 variant 1-like mRNA, complete sequence Length = 503 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 |||||| | ||||| ||||||||||||||| |||| || |||||||||||| Sbjct: 218 atccagaggggccctgtccgcggcatctccatcaaactacaggaggaggag 268
>gb|DQ213962.1| Taeniopygia guttata clone 0063P0001H04 ribosomal protein S17 variant 2-like mRNA, complete sequence Length = 551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 atccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 |||||| | ||||| ||||||||||||||| |||| || |||||||||||| Sbjct: 265 atccagaggggccctgtccgcggcatctccatcaaactacaggaggaggag 315
>gb|AF539801.1| Plasmodiophora brassicae S17 ribosomal protein mRNA, partial cds Length = 298 Score = 54.0 bits (27), Expect = 4e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 170 gtcgaagcgcctccgcaacaaggtggccggcttcaccacccatctgatgcgccgcatcca 229 |||||||||| | ||||||||| | ||||| | ||| || ||||||||| || || || Sbjct: 42 gtcgaagcgcgtgcgcaacaagatcgccggttacacgacgcatctgatgaagcgtattca 101 Query: 230 gcgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgc 284 ||||| || ||||| ||||| || || ||||| |||||||| |||||||||||| Sbjct: 102 acgcgggccggtccgtggcatttcgctgaagcttcaggaggaagagcgcgaacgc 156
>gb|AF402826.1| Ictalurus punctatus 40S ribosomal protein S17 mRNA, complete cds Length = 459 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 207 acccatctgatgcgccgcatccagcgcggccccgtccgcggcatctccctcaagctgcag 266 |||||||||||| ||||||||| | || || ||| | ||||||||| |||| |||||| Sbjct: 175 acccatctgatgaagcgcatccagagagggccagtcagaggcatctccatcaaactgcag 234 Query: 267 gaggaggagcg 277 ||||||||||| Sbjct: 235 gaggaggagcg 245
>ref|XM_237949.3| PREDICTED: Rattus norvegicus similar to putative protein product of HMFN0672 (LOC290325), mRNA Length = 3092 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| ||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 45 catgggccgcgttcgcaccaagaccgtgaagaagtcggcccgagtcatcatcgagaagta 104 Query: 104 cta 106 ||| Sbjct: 105 cta 107
>gb|BC086901.1| Mus musculus ribosomal protein S17, mRNA (cDNA clone MGC:107579 IMAGE:6763239), complete cds Length = 487 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 23 catgggccgcgttcgcaccaagaccgtgaagaag 56
>gb|BC086900.1| Mus musculus ribosomal protein S17, mRNA (cDNA clone MGC:107578 IMAGE:6760363), complete cds Length = 482 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 23 catgggccgcgttcgcaccaagaccgtgaagaag 56
>gb|BC081466.1| Mus musculus ribosomal protein S17, mRNA (cDNA clone MGC:102175 IMAGE:6412006), complete cds Length = 477 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 17 catgggccgcgttcgcaccaagaccgtgaagaag 50
>ref|NM_009092.2| Mus musculus ribosomal protein S17 (Rps17), mRNA Length = 529 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 71 catgggccgcgttcgcaccaagaccgtgaagaag 104
>gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, complete sequence Length = 219781 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 169694 catgggccgcgttcgcaccaagaccgtgaagaag 169661
>ref|XM_993777.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC639398), mRNA Length = 1156 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 47 catgggccgcgttcgcaccaagaccgtgaagaag 80
>ref|XM_915812.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC639398), mRNA Length = 1156 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 47 catgggccgcgttcgcaccaagaccgtgaagaag 80
>ref|XM_892956.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC623169), mRNA Length = 1156 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 47 catgggccgcgttcgcaccaagaccgtgaagaag 80
>emb|CR681446.2|CNS0FOR6 Tetraodon nigroviridis full-length cDNA Length = 472 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggaggaggag 275 ||||||||||| || || ||| | |||||| || |||||||||||||||||||| Sbjct: 208 cgcatccagcgtggtccagtcaggggcatccccatcaagctgcaggaggaggag 261
>dbj|AK162335.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130403J09 product:ribosomal protein S17, full insert sequence Length = 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 22 catgggccgcgttcgcaccaagaccgtgaagaag 55
>dbj|AK162022.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820406P18 product:ribosomal protein S17, full insert sequence Length = 466 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 24 catgggccgcgttcgcaccaagaccgtgaagaag 57
>dbj|AK167206.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0040A22 product:ribosomal protein S17, full insert sequence Length = 461 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 24 catgggccgcgttcgcaccaagaccgtgaagaag 57
>emb|BX936351.12| Mouse DNA sequence from clone RP23-426M5 on chromosome X, complete sequence Length = 73842 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 11743 catgggccgcgttcgcaccaagaccgtgaagaag 11710
>dbj|AK010647.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410041C15 product:ribosomal protein S17, full insert sequence Length = 474 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 32 catgggccgcgttcgcaccaagaccgtgaagaag 65
>dbj|AK007992.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810074P02 product:ribosomal protein S17, full insert sequence Length = 475 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 38 catgggccgcgttcgcaccaagaccgtgaagaag 71
>gb|AY232491.1| Coturnix coturnix ribosomal protein S17 mRNA, complete cds Length = 484 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 222 cgcatccagcgcggccccgtccgcggcatctccctcaagctgcaggagga 271 ||||||||||||||||| |||||||| |||||| | || || |||||||| Sbjct: 212 cgcatccagcgcggcccagtccgcggtatctccattaaactacaggagga 261 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 33 gccgccgcagccatgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||||||||| ||||| | || ||||| ||||||||| Sbjct: 23 gccgccgcagccatgggacgcgtgaggacgaagacggtgaagaag 67
>gb|BC002044.1| Mus musculus ribosomal protein S17, mRNA (cDNA clone MGC:6030 IMAGE:3484265), complete cds Length = 529 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||||||||||||| Sbjct: 71 catgggccgcgttcgcaccaagaccgtgaagaag 104
>gb|AY826141.1| Aedes albopictus clone AL_160 ribosomal protein S17 mRNA, complete cds Length = 318 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcga 280 ||||| || |||||| ||||||||||||||||||| ||||| Sbjct: 121 gtccgtggtatctccatcaagctgcaggaggaggaacgcga 161
>gb|AY550073.1| Sus scrofa 40S ribosomal protein S17 mRNA, complete cds Length = 455 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||| ||||||||||||||||||||| Sbjct: 1 atggggcgcgttcgcaccaagaccgtgaagaag 33
>ref|XM_505414.1| Yarrowia lipolytica CLIB122, YALI0F14465g predicted mRNA Length = 417 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 237 cccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||| || |||||| ||||||| |||||||||||||| Sbjct: 193 cccgtccgaggtatctccttcaagcttcaggaggaggagcg 233
>ref|NM_001001634.1| Sus scrofa 40S ribosomal protein S17 (RPS17), mRNA Length = 455 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||| ||||||||||||||||||||| Sbjct: 1 atggggcgcgttcgcaccaagaccgtgaagaag 33
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 237 cccgtccgcggcatctccctcaagctgcaggaggaggagcg 277 |||||||| || |||||| ||||||| |||||||||||||| Sbjct: 1930631 cccgtccgaggtatctccttcaagcttcaggaggaggagcg 1930671
>ref|XM_824152.1| Trypanosoma brucei TREU927 40S ribosomal protein S17 (Tb11.01.3676) partial mRNA Length = 429 Score = 48.1 bits (24), Expect = 0.024 Identities = 54/64 (84%) Strand = Plus / Plus Query: 231 cgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatg 290 |||||||| ||||| || ||||| || || ||||| || |||||||| || ||||||||| Sbjct: 187 cgcggccctgtccgtggtatctcgctgaaactgcaagaagaggagcgtgagcgccgcatg 246 Query: 291 gact 294 |||| Sbjct: 247 gact 250
>ref|XM_824151.1| Trypanosoma brucei TREU927 40S ribosomal protein S17 (Tb11.01.3675) partial mRNA Length = 429 Score = 48.1 bits (24), Expect = 0.024 Identities = 54/64 (84%) Strand = Plus / Plus Query: 231 cgcggccccgtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatg 290 |||||||| ||||| || ||||| || || ||||| || |||||||| || ||||||||| Sbjct: 187 cgcggccctgtccgtggtatctcgctgaaactgcaagaagaggagcgtgagcgccgcatg 246 Query: 291 gact 294 |||| Sbjct: 247 gact 250
>ref|XM_762597.1| Giardia lamblia ATCC 50803 ribosomal protein S17 (GLP_2_8281_8694) partial mRNA Length = 414 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 237 cccgtccgcggcatctccctcaagctgcaggaggaggagcgcga 280 ||||||| ||||||||| || | ||| ||||||||||||||||| Sbjct: 202 cccgtccacggcatctctctgaggctccaggaggaggagcgcga 245
>emb|BX819194.1|CNS0A90H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1425 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 60 accaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattctcggatgacc 119 ||||||||||||||||| | || || || ||||| ||||||||||| ||||| || || Sbjct: 899 accaagaccgtgaagaaatcttctcgtcaagtcattgagaagtactactctcgcataact 958 Query: 120 ctcgacttccacaccaacaagaag 143 || |||| ||||| ||||||||| Sbjct: 959 cttaactttcacactaacaagaag 982
>gb|AY909424.1| Siniperca chuatsi clone C133 40S ribosomal protein S17 mRNA, complete cds Length = 498 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggagcg 277 ||||||||| |||| ||||||||||||||||| Sbjct: 233 ggcatctccatcaaactgcaggaggaggagcg 264 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 122 cgacttccacaccaacaagaaggtgctcgaggag 155 |||||||||||||||||||| |||| ||||||| Sbjct: 109 cgacttccacaccaacaagagggtgtgcgaggag 142
>gb|U22230.1|FCU22230 Felis domesticus ribosomal protein S17 mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.024 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 4 cgcgtncgcaccaagaccgtgaagaag 30 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| ||||||||||||| |||||| Sbjct: 199 ggcatctccatcaagctgcaggaagaggag 228
>gb|AY927787.2| Aedes aegypti 40S ribosomal protein S17 mRNA, complete cds Length = 600 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggagga 274 ||||| || |||||| ||||||||||||||||||| Sbjct: 227 gtccgtggtatctccatcaagctgcaggaggagga 261
>ref|XM_525570.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S17 (LOC470186), mRNA Length = 432 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 229 atctccatcaagctgcaggaggaggag 255
>ref|XM_510548.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S17 (LOC453592), mRNA Length = 520 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 283 atctccatcaagctgcaggaggaggag 309 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 9 catgggccgcgttcgcaccaaaaccgtgaagaag 42 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 46 tgggtcgcgtccgcaccaagaccgtgaagaag 77 |||| ||||| |||||||| |||||||||||| Sbjct: 80 tgggccgcgttcgcaccaaaaccgtgaagaag 111
>ref|NM_197920.1| Oryza sativa (japonica cultivar-group) putative serine/threonine kinase (OSJNBa0056G17.11), mRNA Length = 1581 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 23 cgccgccgccgctgccggagaag 1
>ref|XM_478628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1122 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggag 27 ||||||||||||| ||||||||||||| Sbjct: 68 ccgccgccgccgccgccggagaaggag 94
>ref|NM_186683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 606 gccgccgctgccggagaaggaga 628
>gb|AY431522.1| Aedes aegypti ASAP ID: 34649 cytosolic small ribosomal subunit S17 mRNA sequence Length = 634 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggagga 274 ||||| || |||||| ||||||||||||||||||| Sbjct: 247 gtccgtggtatctccatcaagctgcaggaggagga 281
>gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, complete sequence Length = 165330 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 92713 cgcgttcgcaccaagaccgtgaagaag 92687
>ref|XM_874149.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 4 (LOC514174), mRNA Length = 951 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 708 atctccatcaagctgcaggaggaggag 734
>ref|XM_874055.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 3 (LOC514174), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 1786 atctccatcaagctgcaggaggaggag 1812
>gb|BC070222.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:88203 IMAGE:6738383), complete cds Length = 512 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 230 atctccatcaagctgcaggaggaggag 256 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 25 catgggccgcgttcgcaccaaaaccgtgaagaag 58
>gb|BC049824.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:59704 IMAGE:6212543), complete cds Length = 475 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 209 atctccatcaagctgcaggaggaggag 235 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 4 catgggccgcgttcgcaccaaaaccgtgaagaag 37
>ref|NM_001021.3| Homo sapiens ribosomal protein S17 (RPS17), mRNA Length = 511 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 234 atctccatcaagctgcaggaggaggag 260 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 29 catgggccgcgttcgcaccaaaaccgtgaagaag 62
>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence Length = 187677 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 133492 cgcgttcgcaccaagaccgtgaagaag 133466
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 151324 gccgccgctgccggagaaggaga 151302
>ref|XM_993499.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC672442), mRNA Length = 835 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 379 cgcgttcgcaccaagaccgtgaagaag 405
>ref|XM_911056.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC382492), mRNA Length = 829 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 379 cgcgttcgcaccaagaccgtgaagaag 405
>ref|XM_980426.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC382492), mRNA Length = 493 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 43 cgcgttcgcaccaagaccgtgaagaag 69
>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0068E24, complete sequence Length = 141492 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 44114 gccgccgctgccggagaaggaga 44092
>gb|BC019899.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:29933 IMAGE:3882924), complete cds Length = 480 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 217 atctccatcaagctgcaggaggaggag 243 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 12 catgggccgcgttcgcaccaaaaccgtgaagaag 45
>gb|AY395570.1| Chlamys farreri ribosomal protein S17 mRNA, partial cds Length = 474 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 tgaccctcgacttccacaccaacaaga 141 ||||||||||||||||||| ||||||| Sbjct: 44 tgaccctcgacttccacacaaacaaga 70 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggag 275 ||||| ||||||||| |||| || |||||||||||| Sbjct: 169 gtccgaggcatctccatcaaactccaggaggaggag 204
>gb|BC000118.1| Homo sapiens cDNA clone IMAGE:3352435, **** WARNING: chimeric clone **** Length = 2838 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 2570 atctccatcaagctgcaggaggaggag 2596 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 2365 catgggccgcgttcgcaccaaaaccgtgaagaag 2398
>gb|BC021027.1| Homo sapiens cDNA clone IMAGE:3621797, **** WARNING: chimeric clone **** Length = 1468 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 1195 atctccatcaagctgcaggaggaggag 1221 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 990 catgggccgcgttcgcaccaaaaccgtgaagaag 1023
>emb|Z74021.1|HSB1E7 Human DNA sequence from clone SC22CB-1E7 on chromosome 22 Contains a ribosomal protein S17 (RPS17) pseudogene and the 5' end of the SLC5A1 gene for solute carrier family 5 (sodiumglucose transporter) member 1, complete sequence Length = 42493 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 22461 atctccatcaagctgcaggaggaggag 22487
>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence Length = 157246 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 6302 atctccatcaagctgcaggaggaggag 6328
>emb|AL645598.14| Mouse DNA sequence from clone RP23-259J23 on chromosome 11 Contains a ribosomal protein S17 (Rps17) pseudogene, complete sequence Length = 141141 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 71801 cgcgttcgcaccaagaccgtgaagaag 71827
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence Length = 169125 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 77872 atctccatcaagctgcaggaggaggag 77898
>emb|CR620738.1| full-length cDNA clone CS0DK004YH09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 452 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 203 atctccatcaagctgcaggaggaggag 229
>emb|CR618357.1| full-length cDNA clone CS0DB001YL21 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 759 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 510 atctccatcaagctgcaggaggaggag 536
>emb|CR618328.1| full-length cDNA clone CS0DD004YF16 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 464 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 212 atctccatcaagctgcaggaggaggag 238
>emb|CR615408.1| full-length cDNA clone CS0DD004YL21 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 460 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 209 atctccatcaagctgcaggaggaggag 235
>emb|CR616208.1| full-length cDNA clone CS0DI079YE09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1922 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 1198 atctccatcaagctgcaggaggaggag 1224
>gb|AC145334.12| Pan troglodytes clone rp43-24d7, complete sequence Length = 139632 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 37134 atctccatcaagctgcaggaggaggag 37108
>emb|CR612555.1| full-length cDNA clone CS0DA002YJ22 of Neuroblastoma of Homo sapiens (human) Length = 1877 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 212 atctccatcaagctgcaggaggaggag 238
>emb|CR609691.1| full-length cDNA clone CS0DC001YD01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 461 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 212 atctccatcaagctgcaggaggaggag 238
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence Length = 186812 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 83973 atctccatcaagctgcaggaggaggag 83947
>emb|CR602312.1| full-length cDNA clone CS0DL008YM17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 460 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 209 atctccatcaagctgcaggaggaggag 235
>emb|CR595559.1| full-length cDNA clone CS0DB009YI01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 463 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 212 atctccatcaagctgcaggaggaggag 238
>gb|AC107421.6| Homo sapiens 3 BAC RP11-8J23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160396 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 146357 atctccatcaagctgcaggaggaggag 146331
>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181191 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 167968 atctccatcaagctgcaggaggaggag 167994
>ref|XM_939482.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S17 (LOC650398), mRNA Length = 529 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 240 atctccatcaagctgcaggaggaggag 266
>ref|XM_377716.3| PREDICTED: Homo sapiens similar to 40S ribosomal protein S17 (LOC402057), mRNA Length = 528 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 240 atctccatcaagctgcaggaggaggag 266
>dbj|AK158902.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530002D07 product:ribosomal protein S17, full insert sequence Length = 533 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 103 cgcgttcgcaccaagaccgtgaagaag 129
>ref|XM_940826.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S17 (LOC257039), mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 421 atctccatcaagctgcaggaggaggag 447
>ref|XM_172230.2| PREDICTED: Homo sapiens similar to 40S ribosomal protein S17 (LOC257039), mRNA Length = 624 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 421 atctccatcaagctgcaggaggaggag 447
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 87461 cgccgccgccgctgccggagaag 87483
>dbj|AK012781.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810021H19 product:ribosomal protein S17, full insert sequence Length = 464 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||||||||||||||||||| Sbjct: 26 cgcgttcgcaccaagaccgtgaagaag 52
>gb|BC022370.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:23905 IMAGE:4738331), complete cds Length = 504 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 234 atctccatcaagctgcaggaggaggag 260 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 29 catgggccgcgttcgcaccaaaaccgtgaagaag 62
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 19465 atctccatcaagctgcaggaggaggag 19491
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 22891607 gccgccgctgccggagaaggaga 22891585
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaaggag 27 ||||||||||||| ||||||||||||| Sbjct: 21525685 ccgccgccgccgccgccggagaaggag 21525659 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 7172359 gccgccgctgccggagaaggaga 7172337 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaag 24 |||||||||||||||||| ||||| Sbjct: 26448216 ccgccgccgccgctgccgcagaag 26448193
>gb|AC087074.1|AC087074 Caenorhabditis briggsae cosmid CB010J11, complete sequence Length = 91433 Score = 46.1 bits (23), Expect = 0.094 Identities = 74/91 (81%) Strand = Plus / Plus Query: 50 tcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagtactattc 109 |||||| || ||||||||||| |||||| | ||||| |||||||||||||||| | Sbjct: 20867 tcgcgttcgtaccaagaccgtcaagaaggcttcccgtgtcctcatcgagaagtactacac 20926 Query: 110 tcggatgaccctcgacttccacaccaacaag 140 ||| |||||| |||||||||| ||||||| Sbjct: 20927 tcgcatgaccaatgacttccacaacaacaag 20957
>ref|NM_001003099.1| Canis familiaris Ribosomal protein S17 (RPS17), mRNA Length = 425 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| |||||||| |||||||||||| | ||||| ||||||||||||| Sbjct: 7 catgggccgcgtgcgcaccaaaaccgtgaagaaggcggcccgagtcatcatcgagaagta 66 Query: 104 cta 106 ||| Sbjct: 67 cta 69
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 12843 gccgccgctgccggagaaggaga 12821
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 199048 gccgccgctgccggagaaggaga 199026
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaaggag 27 ||||||||||||| ||||||||||||| Sbjct: 63469 ccgccgccgccgccgccggagaaggag 63443
>dbj|AB180423.1| Plutella xylostella mRNA for Ribosomal protein S17, complete cds Length = 464 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 38 cgcagccatgggtcgcgtccgcaccaagaccgtgaagaa 76 ||||||||||||||| ||| | ||||||||||| ||||| Sbjct: 24 cgcagccatgggtcgtgtcaggaccaagaccgtcaagaa 62
>gb|AY892179.1| Synthetic construct Homo sapiens clone FLH029468.01L ribosomal protein S17 (RPS17) mRNA, partial cds Length = 408 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 205 atctccatcaagctgcaggaggaggag 231 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||| |||||||| |||||||||||| Sbjct: 1 atgggccgcgttcgcaccaaaaccgtgaagaag 33
>gb|AY889719.1| Synthetic construct Homo sapiens clone FLH029472.01X ribosomal protein S17 (RPS17) mRNA, complete cds Length = 408 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 205 atctccatcaagctgcaggaggaggag 231 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||| ||||| |||||||| |||||||||||| Sbjct: 1 atgggccgcgttcgcaccaaaaccgtgaagaag 33
>dbj|AK026570.1| Homo sapiens cDNA: FLJ22917 fis, clone KAT06430 Length = 647 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 380 atctccatcaagctgcaggaggaggag 406 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 175 catgggccgcgttcgcaccaaaaccgtgaagaag 208
>dbj|AK104880.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G04, full insert sequence Length = 1608 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 50 cgccgccgccgctgccggagaag 28
>dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L04, full insert sequence Length = 1016 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccggagaag 54
>dbj|AK070349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G11, full insert sequence Length = 1122 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaaggag 27 ||||||||||||| ||||||||||||| Sbjct: 69 ccgccgccgccgccgccggagaaggag 95
>dbj|AK066824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I07, full insert sequence Length = 1623 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 cgccgccgccgctgccggagaag 24 ||||||||||||||||||||||| Sbjct: 65 cgccgccgccgctgccggagaag 43
>gb|BC071928.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:88613 IMAGE:5090053), complete cds Length = 488 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 220 atctccatcaagctgcaggaggaggag 246 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 15 catgggccgcgttcgcaccaaaaccgtgaagaag 48
>gb|BC062715.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:72007 IMAGE:4068842), complete cds Length = 596 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 319 atctccatcaagctgcaggaggaggag 345 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 114 catgggccgcgttcgcaccaaaaccgtgaagaag 147
>gb|BC009407.2| Homo sapiens ribosomal protein S17, mRNA (cDNA clone MGC:19553 IMAGE:4334552), complete cds Length = 489 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 212 atctccatcaagctgcaggaggaggag 238 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 7 catgggccgcgttcgcaccaaaaccgtgaagaag 40
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gccgccgctgccggagaaggaga 28 ||||||||||||||||||||||| Sbjct: 23201517 gccgccgctgccggagaaggaga 23201495
>gb|BC020453.1| Homo sapiens ribosomal protein S17, mRNA (cDNA clone IMAGE:3450232) Length = 479 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 216 atctccatcaagctgcaggaggaggag 242 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 11 catgggccgcgttcgcaccaaaaccgtgaagaag 44
>gb|M18000.1|HUMRPS17A Human ribosomal protein S17 gene, complete cds Length = 4029 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 1690 atctccatcaagctgcaggaggaggag 1716
>gb|M13932.1|HUMRPS17 Human ribosomal protein S17 mRNA, complete cds Length = 477 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggag 275 |||||| |||||||||||||||||||| Sbjct: 230 atctccatcaagctgcaggaggaggag 256 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 25 catgggccgcgttcgcaccaaaaccgtgaagaag 58
>emb|AJ388523.1|CFA388523 Canis familiaris mRNA for Ribosomal protein S17 (rpS17 gene) Length = 425 Score = 46.1 bits (23), Expect = 0.094 Identities = 53/63 (84%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaagacctcccgacaggtcatcgagaagta 103 |||||| ||||| |||||||| |||||||||||| | ||||| ||||||||||||| Sbjct: 7 catgggccgcgtgcgcaccaaaaccgtgaagaaggcggcccgagtcatcatcgagaagta 66 Query: 104 cta 106 ||| Sbjct: 67 cta 69
>ref|XM_527902.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S17 (LOC472527), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tctccctcaagctgcaggaggaggag 275 ||||| |||||||||||||||||||| Sbjct: 205 tctccatcaagctgcaggaggaggag 230
>gb|AY441084.1| Armigeres subalbatus ASAP ID: 39593 cytosolic small ribosomal subunit S17 mRNA sequence Length = 631 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaagacctc 82 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 58 atgggtcgcgttcgtaccaagaccgtcaagaaggcctc 95
>gb|BC058484.1| Rattus norvegicus ribosomal protein S17, mRNA (cDNA clone MGC:72869 IMAGE:6921184), complete cds Length = 497 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||| ||||||||| Sbjct: 30 catgggccgcgttcgcaccaagactgtgaagaag 63
>gb|AY231772.1| Drosophila yakuba clone yak-em_RpS17 mRNA sequence Length = 393 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Plus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 47 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 96 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 205 atctccatcaagttgcaggaggaggagcg 233 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||| || |||||||| ||||||||| Sbjct: 1 atgggtcgcgtacgaaccaagacggtgaagaag 33
>ref|XM_533364.2| PREDICTED: Canis familiaris similar to PQ loop repeat containing 1 (predicted) (LOC476157), mRNA Length = 1077 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| ||||| |||||||||||||| Sbjct: 836 ggcatctccatcaagttgcaggaggaggag 865
>gb|AC008155.10| Homo sapiens chromosome 7 clone RP11-289F17, complete sequence Length = 176181 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tctccctcaagctgcaggaggaggag 275 ||||| |||||||||||||||||||| Sbjct: 106427 tctccatcaagctgcaggaggaggag 106452
>gb|BC076184.1| Danio rerio zgc:92704, mRNA (cDNA clone MGC:92704 IMAGE:7075077), complete cds Length = 1482 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggaga 22 |||||||||||||||||||||| Sbjct: 32 ccgccgccgccgctgccggaga 53
>emb|AJ271817.1|DME271817 Drosophila melanogaster aay gene (partial), Shc gene, RPS17 gene and MTF-1 gene Length = 17111 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 5098 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 5049 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 4881 atctccatcaagttgcaggaggaggagcg 4853
>gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, complete sequence Length = 176063 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 cgccgccgccgctgccggagaa 23 |||||||||||||||||||||| Sbjct: 110562 cgccgccgccgctgccggagaa 110541
>ref|NM_200845.1| Danio rerio zgc:77702 (zgc:77702), mRNA Length = 491 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| |||| ||||||||||||||| Sbjct: 208 ggcatctccatcaaactgcaggaggaggag 237
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 128406 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 128357 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 128189 atctccatcaagttgcaggaggaggagcg 128161
>emb|BX511029.9| Zebrafish DNA sequence from clone DKEY-18H21 in linkage group 3, complete sequence Length = 151867 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggaga 22 |||||||||||||||||||||| Sbjct: 4667 ccgccgccgccgctgccggaga 4688
>dbj|AK097136.1| Homo sapiens cDNA FLJ39817 fis, clone SPLEN2010395, weakly similar to 40S RIBOSOMAL PROTEIN S17 Length = 2637 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| |||||||| |||||||||||| Sbjct: 24 catgggccgcgttcgcaccaaaaccgtgaagaag 57
>ref|NM_079278.2| Drosophila melanogaster Ribosomal protein S17 CG3922-RB (RpS17), mRNA Length = 637 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Plus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 103 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 152 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 261 atctccatcaagttgcaggaggaggagcg 289 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||| || |||||||| ||||||||| Sbjct: 57 atgggtcgcgtacgaaccaagacggtgaagaag 89
>ref|NM_002717.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform (PPP2R2A), mRNA Length = 2385 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaa 23 |||||||||||||||||||||| Sbjct: 65 cgccgccgccgctgccggagaa 86
>ref|XM_695547.1| PREDICTED: Danio rerio similar to casein kinase 1, gamma 1 (LOC573918), mRNA Length = 1278 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| |||| ||||||||||||||| Sbjct: 809 ggcatctccatcaaactgcaggaggaggag 838
>ref|XM_499473.1| PREDICTED: Homo sapiens similar to ribosomal protein S17 (LOC442726), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tctccctcaagctgcaggaggaggag 275 ||||| |||||||||||||||||||| Sbjct: 205 tctccatcaagctgcaggaggaggag 230
>ref|XM_939008.1| PREDICTED: Homo sapiens similar to ribosomal protein S17 (LOC442726), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tctccctcaagctgcaggaggaggag 275 ||||| |||||||||||||||||||| Sbjct: 205 tctccatcaagctgcaggaggaggag 230
>ref|XM_374655.1| PREDICTED: Homo sapiens similar to ribosomal protein S17 (LOC442726), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 tctccctcaagctgcaggaggaggag 275 ||||| |||||||||||||||||||| Sbjct: 205 tctccatcaagctgcaggaggaggag 230
>gb|AC159818.2| Mus musculus BAC clone RP23-244M3 from chromosome 12, complete sequence Length = 169374 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| || || ||||||||||||||||||||| Sbjct: 80281 catgggccgagttcgcaccaagaccgtgaagaag 80314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaaggag 27 ||||||||||| |||||||||||||| Sbjct: 27061081 cgccgccgccgatgccggagaaggag 27061106 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccgga 20 |||||||||||||||||||| Sbjct: 4205059 ccgccgccgccgctgccgga 4205078
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggaga 22 |||||||||||||||||||||| Sbjct: 160684 ccgccgccgccgctgccggaga 160705
>ref|NM_017152.1| Rattus norvegicus ribosomal protein S17 (Rps17), mRNA Length = 466 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||| ||||||||| Sbjct: 24 catgggccgcgttcgcaccaagactgtgaagaag 57
>ref|XM_577309.1| PREDICTED: Rattus norvegicus similar to ribosomal protein S17 (LOC364108), mRNA Length = 408 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 gcgtccgcaccaagaccgtgaagaag 77 |||| ||||||||||||||||||||| Sbjct: 8 gcgttcgcaccaagaccgtgaagaag 33
>ref|XM_344159.2| PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S17 (LOC364023), mRNA Length = 1347 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||| ||||||||| Sbjct: 939 catgggccgcgttcgcaccaagactgtgaagaag 972
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaaggag 27 ||||||||||| |||||||||||||| Sbjct: 29891 cgccgccgccgatgccggagaaggag 29916
>emb|AL935050.11| Zebrafish DNA sequence from clone CH211-59B1, complete sequence Length = 177773 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| |||| ||||||||||||||| Sbjct: 172046 ggcatctccatcaaactgcaggaggaggag 172075
>gb|BC062279.1| Danio rerio zgc:77702, mRNA (cDNA clone MGC:77702 IMAGE:6997693), complete cds Length = 491 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 ggcatctccctcaagctgcaggaggaggag 275 ||||||||| |||| ||||||||||||||| Sbjct: 208 ggcatctccatcaaactgcaggaggaggag 237
>gb|BC041071.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform, mRNA (cDNA clone MGC:52248 IMAGE:5484483), complete cds Length = 2362 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cgccgccgccgctgccggagaa 23 |||||||||||||||||||||| Sbjct: 42 cgccgccgccgctgccggagaa 63
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 44.1 bits (22), Expect = 0.37 Identities = 52/62 (83%) Strand = Plus / Minus Query: 240 gtccgcggcatctccctcaagctgcaggaggaggagcgcgaacgccgcatggacttcgtc 299 ||||| ||||| || ||||| ||||||| || ||||| || ||||||||||| |||||| Sbjct: 366800 gtccgaggcatttctctcaaattgcaggaagaagagcgtgagcgccgcatggatttcgtc 366741 Query: 300 cc 301 || Sbjct: 366740 cc 366739
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Minus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 239003 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 238954 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 238786 atctccatcaagttgcaggaggaggagcg 238758
>gb|BT001651.1| Drosophila melanogaster RE44119 full insert cDNA Length = 543 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Plus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 100 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 149 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 258 atctccatcaagttgcaggaggaggagcg 286 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 45 atgggtcgcgtccgcaccaagaccgtgaagaag 77 ||||||||||| || |||||||| ||||||||| Sbjct: 54 atgggtcgcgtacgaaccaagacggtgaagaag 86
>gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosome 17, complete sequence Length = 157621 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggaga 22 |||||||||||||||||||||| Sbjct: 39011 ccgccgccgccgctgccggaga 39032
>gb|K02933.1|RATRPS17 Rat ribosomal protein S17 mRNA, complete cds Length = 466 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||| ||||||||| Sbjct: 24 catgggccgcgttcgcaccaagactgtgaagaag 57
>gb|M22142.1|DRORPS17 D.melanogaster ribosomal protein S17 gene, complete cds Length = 1700 Score = 44.1 bits (22), Expect = 0.37 Identities = 43/50 (86%) Strand = Plus / Plus Query: 91 tcatcgagaagtactattctcggatgaccctcgacttccacaccaacaag 140 |||||||||||||||| |||| |||| | |||||||||||||||||| Sbjct: 1050 tcatcgagaagtactacactcgcctgacgttggacttccacaccaacaag 1099 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 atctccctcaagctgcaggaggaggagcg 277 |||||| ||||| |||||||||||||||| Sbjct: 1267 atctccatcaagttgcaggaggaggagcg 1295
>dbj|D25213.1|MUSRPS17 Mouse rpS17 mRNA for ribosomal protein S17, complete cds Length = 453 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 44 catgggtcgcgtccgcaccaagaccgtgaagaag 77 |||||| ||||| ||||||||||| ||||||||| Sbjct: 11 catgggccgcgttcgcaccaagactgtgaagaag 44
>ref|XM_550139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggag 21 ||||||||||||||||||||| Sbjct: 23 ccgccgccgccgctgccggag 43
>ref|XM_463153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggag 21 ||||||||||||||||||||| Sbjct: 521 ccgccgccgccgctgccggag 501
>ref|NM_005766.2| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (FARP1), transcript variant 1, mRNA Length = 5028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ggagagggagccgccgcagcc 44 ||||||||||||||||||||| Sbjct: 278 ggagagggagccgccgcagcc 298
>ref|NM_001001715.1| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (FARP1), transcript variant 2, mRNA Length = 1337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 ggagagggagccgccgcagcc 44 ||||||||||||||||||||| Sbjct: 278 ggagagggagccgccgcagcc 298
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 ccgccgccgccgctgccggagaaggagag 29 ||||||||||||| |||||||| |||||| Sbjct: 58382 ccgccgccgccgccgccggagagggagag 58354
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggag 21 ||||||||||||||||||||| Sbjct: 114583 ccgccgccgccgctgccggag 114603
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 atgctggcgttcctcggcatggccg 381 ||||||||| ||||||||||||||| Sbjct: 920351 atgctggcggtcctcggcatggccg 920327
>ref|XM_853343.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 9 (LOC477374), mRNA Length = 2549 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853304.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 8 (LOC477374), mRNA Length = 2546 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853265.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 7 (LOC477374), mRNA Length = 2513 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853226.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 6 (LOC477374), mRNA Length = 2531 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853185.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 5 (LOC477374), mRNA Length = 2528 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853147.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 4 (LOC477374), mRNA Length = 2600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>ref|XM_853102.1| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 3 (LOC477374), mRNA Length = 829 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 77 gccgccgccgctgccggagaa 97
>ref|XM_534568.2| PREDICTED: Canis familiaris similar to alpha isoform of regulatory subunit B55, protein phosphatase 2, transcript variant 2 (LOC477374), mRNA Length = 2507 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 gccgccgccgctgccggagaa 23 ||||||||||||||||||||| Sbjct: 60 gccgccgccgctgccggagaa 80
>gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome 12, complete sequence Length = 175549 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ccgccgccgccgctgccggagaagg 25 |||||||||||||||||||| |||| Sbjct: 130580 ccgccgccgccgctgccggaaaagg 130604
>ref|XM_812742.1| Trypanosoma cruzi strain CL Brener ribosomal protein S25 (Tc00.1047053509233.190) partial mRNA Length = 333 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 tcgacaaggagacgatggaca 357 ||||||||||||||||||||| Sbjct: 143 tcgacaaggagacgatggaca 163
>ref|XM_814621.1| Trypanosoma cruzi strain CL Brener ribosomal protein S25 (Tc00.1047053504105.94) partial mRNA Length = 333 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 tcgacaaggagacgatggaca 357 ||||||||||||||||||||| Sbjct: 143 tcgacaaggagacgatggaca 163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,003,431 Number of Sequences: 3902068 Number of extensions: 4003431 Number of successful extensions: 150188 Number of sequences better than 10.0: 496 Number of HSP's better than 10.0 without gapping: 502 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 142343 Number of HSP's gapped (non-prelim): 7824 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
