Clone Name	bast64f02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK066658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	244	2e-61
2	gb|AF527616.1| Zea mays nucleasome/chromatin assembly factor D p...	236	6e-59
3	emb|Y08807.1|ZMHMGD1 Z.mays mRNA for HMG protein	236	6e-59
4	gb|AF440221.1|AF440221 Zea mays cultivar Ohio43 HMG-like nucleos...	228	1e-56
5	gb|BT017797.1| Zea mays clone EL01N0505D03.c mRNA sequence	196	5e-47
6	gb|BT017604.1| Zea mays clone EL01N0432C03.c mRNA sequence	157	4e-35
7	gb|BT017020.1| Zea mays clone EK07D2312C01.c mRNA sequence	149	1e-32
8	gb|AY104636.1| Zea mays PCO072737 mRNA sequence	149	1e-32
9	gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome...	80	8e-12
10	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	80	8e-12
11	dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic D...	80	8e-12
12	emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein	70	7e-09
13	emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group prot...	70	7e-09
14	emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobi...	68	3e-08
15	gb|AF531431.1| Zea mays nucleosome/chromatin assembly factor gro...	52	0.002
16	gb|BT016280.1| Zea mays clone Contig113 mRNA sequence	52	0.002
17	gb|AY262827.1| Oryza sativa (indica cultivar-group) HMGB1 gene, ...	52	0.002
18	emb|X66077.1|ZMMNB1B Z.mays MNB1b mRNA for DNA-binding protein	52	0.002
19	emb|X58282.1|ZMHMGPMR Maize mRNA for a high mobility group protein	52	0.002
20	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
21	gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein...	52	0.002
22	dbj|D17776.1|RICAD2812 Oryza sativa mRNA for high mobility group...	52	0.002
23	dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
24	dbj|AK068898.1| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.002
25	dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.002
26	gb|AY103575.1| Zea mays PCO080122 mRNA sequence	52	0.002
27	gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ...	52	0.002
28	ref|XM_468657.1| Oryza sativa (japonica cultivar-group), mRNA	48	0.027
29	gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome...	48	0.027
30	gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome...	48	0.027
31	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	48	0.027
32	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	48	0.027
33	emb|AJ131373.1|ZMA131373 Zea mays hmga gene, exons 1-7	48	0.027
34	dbj|AK110543.1| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.027
35	gb|L28094.1|BLYCDNA Barley mRNA sequence	48	0.027
36	gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL ...	46	0.11
37	gb|AC009320.7| Homo sapiens 12 BAC RP11-310I24 (Roswell Park Can...	46	0.11
38	gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com...	46	0.11
39	gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple...	46	0.11
40	gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chrom...	46	0.11
41	ref|NM_122249.2| Arabidopsis thaliana HMGB6; transcription facto...	44	0.42
42	gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D p...	44	0.42
43	ref|XM_504837.1| Yarrowia lipolytica CLIB122, YALI0F00836g predi...	44	0.42
44	gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence	44	0.42
45	gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleos...	44	0.42
46	gb|AY086023.1| Arabidopsis thaliana clone 207075 mRNA, complete ...	44	0.42
47	dbj|AK118688.1| Arabidopsis thaliana At5g23420 mRNA for unknown ...	44	0.42
48	dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.42
49	gb|AY108096.1| Zea mays PCO136722 mRNA sequence	44	0.42
50	emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1...	44	0.42
51	ref|XM_473648.1| Oryza sativa (japonica cultivar-group), predic...	42	1.7
52	gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
53	ref|XM_615468.2| PREDICTED: Bos taurus similar to C34E11.3 (LOC5...	42	1.7
54	gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, co...	42	1.7
55	gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
56	ref|XM_501733.1| Yarrowia lipolytica CLIB122, YALI0C11671g predi...	42	1.7
57	emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,...	42	1.7
58	gb|BC022952.1| Mus musculus v-maf musculoaponeurotic fibrosarcom...	42	1.7
59	dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl...	42	1.7
60	dbj|AK096542.1| Homo sapiens cDNA FLJ39223 fis, clone OCBBF20071...	42	1.7
61	dbj|AK146043.1| Mus musculus 13 days pregnant adult female place...	42	1.7
62	dbj|AK145835.1| Mus musculus 14 days pregnant adult female place...	42	1.7
63	dbj|AK156896.1| Mus musculus activated spleen cDNA, RIKEN full-l...	42	1.7
64	gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
65	gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
66	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
67	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
68	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
69	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
70	dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
71	dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
72	dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
73	dbj|AK069449.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.7
74	dbj|AK063748.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.7
75	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
76	ref|NM_010755.2| Mus musculus v-maf musculoaponeurotic fibrosarc...	42	1.7
77	emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1...	42	1.7
78	emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chr...	42	1.7
79	dbj|AB009694.1| Mus musculus gene for mafF, complete cds	42	1.7
80	ref|XM_474100.1| Oryza sativa (japonica cultivar-group), predic...	40	6.6
81	ref|NM_197049.1| Oryza sativa (japonica cultivar-group) putative...	40	6.6
82	ref|NM_197047.1| Oryza sativa (japonica cultivar-group) putative...	40	6.6
83	gb|BT016444.1| Zea mays clone Contig277 mRNA sequence	40	6.6
84	gb|AY172651.1| Sus scrofa delta-like 1 protein (DLK1) gene, part...	40	6.6
85	gb|AC099038.2| Drosophila melanogaster clone BACR28A23, complete...	40	6.6
86	ref|XM_365573.1| Magnaporthe grisea 70-15 hypothetical protein (...	40	6.6
87	gb|AF049107.1| Myxococcus xanthus response regulator FrzZ (frzZ)...	40	6.6
88	gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosom...	40	6.6
89	gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, com...	40	6.6
90	gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete...	40	6.6
91	gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosom...	40	6.6
92	gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, compl...	40	6.6
93	gb|AY170467.1| Leishmania mexicana mexicana delta adpatin gene, ...	40	6.6
94	gb|AC006325.3| Homo sapiens BAC clone GS1-207A4 from 7, complete...	40	6.6
95	gb|AC142309.1| Pan troglodytes BAC clone RP43-45E24 from 7, comp...	40	6.6
96	emb|Y08298.1|ZMHMGC2 Z.mays mRNA for HMGc2 protein	40	6.6
97	emb|Y08297.1|ZMHMGC1 Z.mays mRNA for HMGc1 protein	40	6.6
98	emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ...	40	6.6
99	emb|BX640432.1| Bordetella parapertussis strain 12822, complete ...	40	6.6
100	emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4,...	40	6.6
101	emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81...	40	6.6
102	emb|AJ431260.1|UNK431260 Uncultured bacterium plasmid pB4 comple...	40	6.6
103	emb|AJ131374.1|ZMA131374 Zea mays hmgc1 gene, exons 1-7	40	6.6
104	emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chr...	40	6.6
105	gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 gen...	40	6.6
106	dbj|AB231906.2| Sphingomonas sp. A1 plasmid pA1 DNA, complete se...	40	6.6
107	dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple...	40	6.6
108	gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde...	40	6.6
109	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.6
110	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.6
111	gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromos...	40	6.6
112	gb|AC009365.9|AC009365 Homo sapiens chromosome 7 clone RP11-355K...	40	6.6
113	gb|AY007208.1| Sus scrofa Pref-1 gene, partial cds	40	6.6
114	gb|AF502250.1| Triticum aestivum HMG-I/Y protein HMGa (HMGa) gen...	40	6.6
115	dbj|AK106352.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.6
116	dbj|AK067139.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.6
117	gb|AY110080.1| Zea mays CL3663_1 mRNA sequence	40	6.6
118	emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	6.6
119	gb|AC006409.2|AC006409 Homo sapiens Chromosome 11q12.2 PAC clone...	40	6.6
120	gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ...	40	6.6
121	dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	6.6
122	dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	6.6
123	dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	6.6
124	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	40	6.6
125	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	40	6.6
126	emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005...	40	6.6
127	gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, comple...	40	6.6
128	gb|AE017226.1| Treponema denticola ATCC 35405, complete genome	40	6.6
129	emb|CR956367.12| Pig DNA sequence from clone PigE-122C21 on chro...	40	6.6

---

>dbj|AK066658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071N11, full
           insert sequence
          Length = 842

 Score =  244 bits (123), Expect = 2e-61
 Identities = 291/346 (84%), Gaps = 7/346 (2%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcccaag 200
           |||| |||||||||| |||||| ||||| |||||| || |||||||| |||||||| |||
Sbjct: 138 ggcgactccaggctctcggtgaggaagaccaaggcggagaaggacccgaacaagccgaag 197

                                                                       
Query: 201 cgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacagggagaag 260
            | || |||||||| |||||||| ||||||||    ||||||||||| |||| |||||||
Sbjct: 198 aggccaccgagcgcgttcttcgtgttcatggagcagttcaggaaggactacaaggagaag 257

                                                                       
Query: 261 caccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaagtct 320
           |||||| ||||||||| || ||| |||||||||||||| |||||||| ||||||||||| 
Sbjct: 258 caccccaacgtcaagcaggtctcggtgattggcaaggctggtggtgacaagtggaagtcc 317

                                                                       
Query: 321 ctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccgagtac 380
            ||| ||| ||||| |||||||| | |    ||||||| |||||||||||||| ||||||
Sbjct: 318 atgactgatgctgacaaggctcctttcgtgaccaaggctgagaagctcaaggctgagtac 377

                                                                       
Query: 381 accaagaagatcaacgcctacaacaacccacaggcaggagaggcg------tccggcgac 434
           |||||||||||  ||||||||||||||   ||||||||||   ||      || ||||||
Sbjct: 378 accaagaagattgacgcctacaacaacaagcaggcaggaggcccggctacctcaggcgac 437

                                                         
Query: 435 tctgacaagtcc-agtccgaggtgaacgacgaggacgacggcagcg 479
           |||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 438 tctgacaagtccaagtccgaggtgaacgacgaggacgagggcagcg 483

---

>gb|AF527616.1| Zea mays nucleasome/chromatin assembly factor D protein NFD101
           (nfd101) mRNA, complete cds
          Length = 715

 Score =  236 bits (119), Expect = 6e-59
 Identities = 287/342 (83%), Gaps = 7/342 (2%)
 Strand = Plus / Plus

                                                                       
Query: 137 cgccggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcc 196
           |||||||| |||||||||| |||||| ||||| |||||| || |||||||| ||||||||
Sbjct: 89  cgccggcgactccaggctctcggtgaggaagaccaaggcagagaaggacccaaacaagcc 148

                                                                       
Query: 197 caagcgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacaggga 256
           |||| | || |||||||| |||||||||||||||||    ||||||||||| |||| |||
Sbjct: 149 caagaggcctccgagcgcgttcttcgtcttcatggaggagttcaggaaggactacaagga 208

                                                                       
Query: 257 gaagcaccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaa 316
           |||||||||| | || ||||  | |||||||||||||||||| |||||||| ||||||||
Sbjct: 209 gaagcaccccaatgtgaagcaagtctccgtgattggcaaggctggtggtgacaagtggaa 268

                                                                       
Query: 317 gtctctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccga 376
           ||| |||  ||| || |||||||||||||||    | ||||| |||||||||||||| ||
Sbjct: 269 gtccctgtctgatgccgagaaggctccctacgtgtctaaggcagagaagctcaaggctga 328

                                                                       
Query: 377 gtacaccaagaagatcaacgcctacaacaacccacaggcaggaga------ggcgtccgg 430
           |||||||||||||||| |||| |||||||||   ||| | |||||      |||||| ||
Sbjct: 329 gtacaccaagaagatcgacgcttacaacaacaagcagtctggagaccccacggcgtctgg 388

                                                     
Query: 431 cgactctgacaagtcc-agtccgaggtgaacgacgaggacga 471
            || || ||||||||| |||||||||||||||||||||||||
Sbjct: 389 tgattccgacaagtccaagtccgaggtgaacgacgaggacga 430

---

>emb|Y08807.1|ZMHMGD1 Z.mays mRNA for HMG protein
          Length = 731

 Score =  236 bits (119), Expect = 6e-59
 Identities = 287/342 (83%), Gaps = 7/342 (2%)
 Strand = Plus / Plus

                                                                       
Query: 137 cgccggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcc 196
           |||||||| |||||||||| |||||| ||||| |||||| || |||||||| ||||||||
Sbjct: 63  cgccggcgactccaggctctcggtgaggaagaccaaggcagagaaggacccaaacaagcc 122

                                                                       
Query: 197 caagcgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacaggga 256
           |||| | || |||||||| |||||||||||||||||    ||||||||||| |||| |||
Sbjct: 123 caagaggcctccgagcgcgttcttcgtcttcatggaggagttcaggaaggactacaagga 182

                                                                       
Query: 257 gaagcaccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaa 316
           |||||||||| | || ||||  | |||||||||||||||||| |||||||| ||||||||
Sbjct: 183 gaagcaccccaatgtgaagcaagtctccgtgattggcaaggctggtggtgacaagtggaa 242

                                                                       
Query: 317 gtctctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccga 376
           ||| |||  ||| || |||||||||||||||    | ||||| |||||||||||||| ||
Sbjct: 243 gtccctgtctgatgccgagaaggctccctacgtgtctaaggcagagaagctcaaggctga 302

                                                                       
Query: 377 gtacaccaagaagatcaacgcctacaacaacccacaggcaggaga------ggcgtccgg 430
           |||||||||||||||| |||| |||||||||   ||| | |||||      |||||| ||
Sbjct: 303 gtacaccaagaagatcgacgcttacaacaacaagcagtctggagaccccacggcgtctgg 362

                                                     
Query: 431 cgactctgacaagtcc-agtccgaggtgaacgacgaggacga 471
            || || ||||||||| |||||||||||||||||||||||||
Sbjct: 363 tgattccgacaagtccaagtccgaggtgaacgacgaggacga 404

---

>gb|AF440221.1|AF440221 Zea mays cultivar Ohio43 HMG-like nucleosome/chromatin assembly
           factor D (nfd101) mRNA, complete cds
          Length = 781

 Score =  228 bits (115), Expect = 1e-56
 Identities = 286/342 (83%), Gaps = 7/342 (2%)
 Strand = Plus / Plus

                                                                       
Query: 137 cgccggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcc 196
           |||||||| |||||||||| |||||| ||||| |||||| || |||||||| ||||||||
Sbjct: 102 cgccggcgactccaggctctcggtgaggaagaccaaggctgagaaggacccaaacaagcc 161

                                                                       
Query: 197 caagcgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacaggga 256
           |||| | || |||||||| |||||||||||||||||    ||||||||||| |||| |||
Sbjct: 162 caagaggcctccgagcgcgttcttcgtcttcatggaggagttcaggaaggactacaagga 221

                                                                       
Query: 257 gaagcaccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaa 316
           |||||||||| | || ||||  | |||| ||||||||||||| |||||||| ||||||||
Sbjct: 222 gaagcaccccaatgtgaagcaagtctccctgattggcaaggctggtggtgacaagtggaa 281

                                                                       
Query: 317 gtctctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccga 376
           ||| |||  ||| || |||||||||||||||    | ||||| |||||||||||||| ||
Sbjct: 282 gtccctgtctgatgccgagaaggctccctacgtgtctaaggcagagaagctcaaggctga 341

                                                                       
Query: 377 gtacaccaagaagatcaacgcctacaacaacccacaggcaggaga------ggcgtccgg 430
           |||||||||||||||| |||| |||||||||   ||| | |||||      |||||| ||
Sbjct: 342 gtacaccaagaagatcgacgcttacaacaacaagcagtctggagaccccacggcgtctgg 401

                                                     
Query: 431 cgactctgacaagtcc-agtccgaggtgaacgacgaggacga 471
            || || ||||||||| |||||||||||||||||||||||||
Sbjct: 402 tgattccgacaagtccaagtccgaggtgaacgacgaggacga 443

---

>gb|BT017797.1| Zea mays clone EL01N0505D03.c mRNA sequence
          Length = 649

 Score =  196 bits (99), Expect = 5e-47
 Identities = 228/271 (84%)
 Strand = Plus / Plus

                                                                       
Query: 137 cgccggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcc 196
           |||||||| |||||||||| ||||   ||||| |||||| || |||||||| ||||||||
Sbjct: 4   cgccggcgactccaggctctcggtccggaagaccaaggctgagaaggacccaaacaagcc 63

                                                                       
Query: 197 caagcgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacaggga 256
           |||| | || |||||||| |||||||||||||||||    ||||||||||| |||| |||
Sbjct: 64  caagaggcctccgagcgcgttcttcgtcttcatggaggagttcaggaaggactacaagga 123

                                                                       
Query: 257 gaagcaccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaa 316
           |||||||||| | || ||||  | |||| ||||||||||||| |||||||| ||||||||
Sbjct: 124 gaagcaccccaatgtgaagcaagtctccctgattggcaaggctggtggtgacaagtggaa 183

                                                                       
Query: 317 gtctctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccga 376
           ||| |||  ||| || |||||||||||||||    | ||||| |||||||||||||| ||
Sbjct: 184 gtccctgtctgatgccgagaaggctccctacgtgtctaaggcagagaagctcaaggctga 243

                                          
Query: 377 gtacaccaagaagatcaacgcctacaacaac 407
            ||||||||||||||| |||| |||||||||
Sbjct: 244 ttacaccaagaagatcgacgcttacaacaac 274

---

>gb|BT017604.1| Zea mays clone EL01N0432C03.c mRNA sequence
          Length = 727

 Score =  157 bits (79), Expect = 4e-35
 Identities = 220/267 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcccaag 200
           |||| |||||||||| |||||| ||||| |||||  || |||||||| ||||||||||||
Sbjct: 37  ggcgactccaggctctcggtgaggaagaccaaggttgagaaggacccaaacaagcccaag 96

                                                                       
Query: 201 cgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacagggagaag 260
            | || |||| ||| |||||||||||||||||    ||||||||||| |||| |||||||
Sbjct: 97  aggcctccgaccgcgttcttcgtcttcatggaggagttcaggaaggactacaaggagaag 156

                                                                       
Query: 261 caccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaagtct 320
           |||||| | || || | || ||| |||||||||||||| |||||||| | ||||||||| 
Sbjct: 157 caccccaatgtgaaacaggtctcagtgattggcaaggctggtggtgacatgtggaagtcc 216

                                                                       
Query: 321 ctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccgagtac 380
            ||  ||| || |||||||||||||||    | |||||||||||||| ||||  ||||||
Sbjct: 217 ttgtctgatgccgagaaggctccctacgtatctaaggccgagaagctgaaggttgagtac 276

                                      
Query: 381 accaagaagatcaacgcctacaacaac 407
           || ||||||||  ||||||| ||||||
Sbjct: 277 acaaagaagatggacgcctataacaac 303

---

>gb|BT017020.1| Zea mays clone EK07D2312C01.c mRNA sequence
          Length = 769

 Score =  149 bits (75), Expect = 1e-32
 Identities = 219/267 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcccaag 200
           |||| |||||||||| |||||| ||||| |||||  || |||||||| ||||||||||||
Sbjct: 99  ggcgactccaggctctcggtgaggaagaccaaggttgagaaggacccaaacaagcccaag 158

                                                                       
Query: 201 cgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacagggagaag 260
            | || |||| ||| |||||||||||||||||    ||||||||||| |||| |||||||
Sbjct: 159 aggcctccgaccgcgttcttcgtcttcatggaggagttcaggaaggactacaaggagaag 218

                                                                       
Query: 261 caccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaagtct 320
           |||||| | || || |  | ||| |||||||||||||| |||||||| | ||||||||| 
Sbjct: 219 caccccaatgtgaaacaagtctcagtgattggcaaggctggtggtgacatgtggaagtcc 278

                                                                       
Query: 321 ctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccgagtac 380
            ||  ||| || |||||||||||||||    | |||||||||||||| ||||  ||||||
Sbjct: 279 ttgtctgatgccgagaaggctccctacgtatctaaggccgagaagctgaaggttgagtac 338

                                      
Query: 381 accaagaagatcaacgcctacaacaac 407
           || ||||||||  ||||||| ||||||
Sbjct: 339 acaaagaagatggacgcctataacaac 365

---

>gb|AY104636.1| Zea mays PCO072737 mRNA sequence
          Length = 577

 Score =  149 bits (75), Expect = 1e-32
 Identities = 219/267 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggcggctccaggctcgcggtgaagaagagcaaggccgacaaggaccccaacaagcccaag 200
           |||| |||||||||| |||||| ||||| |||||  || |||||||| ||||||||||||
Sbjct: 110 ggcgactccaggctctcggtgaggaagaccaaggttgagaaggacccaaacaagcccaag 169

                                                                       
Query: 201 cgacccccgagcgccttcttcgtcttcatggataccttcaggaaggagtacagggagaag 260
            | || |||| ||| |||||||||||||||||    ||||||||||| |||| |||||||
Sbjct: 170 aggcctccgaccgcgttcttcgtcttcatggaggagttcaggaaggactacaaggagaag 229

                                                                       
Query: 261 caccccgacgtcaagctggcctccgtgattggcaaggccggtggtgagaagtggaagtct 320
           |||||| | || || |  | ||| |||||||||||||| |||||||| | ||||||||| 
Sbjct: 230 caccccaatgtgaaacaagtctcagtgattggcaaggctggtggtgacatgtggaagtcc 289

                                                                       
Query: 321 ctgagtgacgctgagaaggctccctacaatgccaaggccgagaagctcaaggccgagtac 380
            ||  ||| || |||||||||||||||    | |||||||||||||| ||||  ||||||
Sbjct: 290 ttgtctgatgccgagaaggctccctacgtatctaaggccgagaagctgaaggttgagtac 349

                                      
Query: 381 accaagaagatcaacgcctacaacaac 407
           || ||||||||  ||||||| ||||||
Sbjct: 350 acaaagaagatggacgcctataacaac 376

---

>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 50/52 (96%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                 
Query: 429   ggcgactctgacaagtcca-gtccgaggtgaacgacgaggacgacggcagcg 479
             ||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 13663 ggcgactctgacaagtccaagtccgaggtgaacgacgaggacgagggcagcg 13714



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 352   ccaaggccgagaagctcaaggccgagtacaccaagaagatcaacgcctacaacaac 407
             ||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||
Sbjct: 13500 ccaaggctgagaagctcaaggctgagtacaccaagaagattgacgcctacaacaac 13555



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 237   ttcaggaaggagtacagggagaagcaccccgacgtcaagc 276
             ||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 12667 ttcaggaaggactacaaggagaagcaccccaacgtcaagc 12706



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 287   gattggcaaggccggtggtgagaagtggaagtc 319
             |||||||||||| |||||||| |||||||||||
Sbjct: 12816 gattggcaaggctggtggtgacaagtggaagtc 12848

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 50/52 (96%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                    
Query: 429      ggcgactctgacaagtcca-gtccgaggtgaacgacgaggacgacggcagcg 479
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 21557037 ggcgactctgacaagtccaagtccgaggtgaacgacgaggacgagggcagcg 21557088



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 352      ccaaggccgagaagctcaaggccgagtacaccaagaagatcaacgcctacaacaac 407
                ||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||
Sbjct: 21556874 ccaaggctgagaagctcaaggctgagtacaccaagaagattgacgcctacaacaac 21556929



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 237      ttcaggaaggagtacagggagaagcaccccgacgtcaagc 276
                ||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 21556041 ttcaggaaggactacaaggagaagcaccccaacgtcaagc 21556080



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 287      gattggcaaggccggtggtgagaagtggaagtc 319
                |||||||||||| |||||||| |||||||||||
Sbjct: 21556190 gattggcaaggctggtggtgacaagtggaagtc 21556222

---

>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0489D11
          Length = 150757

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 50/52 (96%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                  
Query: 429    ggcgactctgacaagtcca-gtccgaggtgaacgacgaggacgacggcagcg 479
              ||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 118647 ggcgactctgacaagtccaagtccgaggtgaacgacgaggacgagggcagcg 118698



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                      
Query: 352    ccaaggccgagaagctcaaggccgagtacaccaagaagatcaacgcctacaacaac 407
              ||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||
Sbjct: 118484 ccaaggctgagaagctcaaggctgagtacaccaagaagattgacgcctacaacaac 118539



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 237    ttcaggaaggagtacagggagaagcaccccgacgtcaagc 276
              ||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 117651 ttcaggaaggactacaaggagaagcaccccaacgtcaagc 117690



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 287    gattggcaaggccggtggtgagaagtggaagtc 319
              |||||||||||| |||||||| |||||||||||
Sbjct: 117800 gattggcaaggctggtggtgacaagtggaagtc 117832

---

>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein
          Length = 974

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 161 gaagaagagcaaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttctt 220
           ||||||| | ||||| | |||||||||||||||||||||| |  | || |||||||||||
Sbjct: 178 gaagaagggaaaggcaggcaaggaccccaacaagcccaagagggcgcccagcgccttctt 237

                      
Query: 221 cgtcttcatgg 231
           |||||||||||
Sbjct: 238 cgtcttcatgg 248

---

>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW)
          Length = 923

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 161 gaagaagagcaaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttctt 220
           ||||||| ||||||||| |||||||||||||||||||||| |  | ||   |||||||||
Sbjct: 166 gaagaagggcaaggccggcaaggaccccaacaagcccaagagggcgccatccgccttctt 225

                      
Query: 221 cgtcttcatgg 231
           |||||||||||
Sbjct: 226 cgtcttcatgg 236

---

>emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobility group protein (clone
           pBAN EU134)
          Length = 784

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||| |||||||| || |||||||||||| | || || |||||||||||||||||||||
Sbjct: 154 aaggcggacaaggatccgaacaagcccaagaggcctcccagcgccttcttcgtcttcatg 213

             
Query: 231 ga 232
           ||
Sbjct: 214 ga 215

---

>gb|AF531431.1| Zea mays nucleosome/chromatin assembly factor group D protein
           (nfd103) mRNA, complete cds
          Length = 887

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 203 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 262

             
Query: 231 ga 232
           ||
Sbjct: 263 ga 264

---

>gb|BT016280.1| Zea mays clone Contig113 mRNA sequence
          Length = 817

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 433 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 492

             
Query: 231 ga 232
           ||
Sbjct: 493 ga 494

---

>gb|AY262827.1| Oryza sativa (indica cultivar-group) HMGB1 gene, complete cds
          Length = 3659

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 171  aaggccgacaaggaccccaacaagcccaag 200
            ||||||| ||||||||||||||||||||||
Sbjct: 1974 aaggccggcaaggaccccaacaagcccaag 2003



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 351  gccaaggccgagaagctcaaggccgagtacaccaag 386
            ||||||||| | ||||||||||||||||||| ||||
Sbjct: 2487 gccaaggccaacaagctcaaggccgagtacaacaag 2522

---

>emb|X66077.1|ZMMNB1B Z.mays MNB1b mRNA for DNA-binding protein
          Length = 918

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 132 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 191

             
Query: 231 ga 232
           ||
Sbjct: 192 ga 193

---

>emb|X58282.1|ZMHMGPMR Maize mRNA for a high mobility group protein
          Length = 885

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 136 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 195

             
Query: 231 ga 232
           ||
Sbjct: 196 ga 197

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 171      aaggccgacaaggaccccaacaagcccaag 200
                ||||||| ||||||||||||||||||||||
Sbjct: 30477833 aaggccggcaaggaccccaacaagcccaag 30477862



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 351      gccaaggccgagaagctcaaggccgagtacaccaag 386
                ||||||||| | ||||||||||||||||||| ||||
Sbjct: 30478348 gccaaggccaacaagctcaaggccgagtacaacaag 30478383



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 39       gcagcgcccgcctcctcccagtcccaccc 67
                |||||||||||| | ||||||||||||||
Sbjct: 15879080 gcagcgcccgccgcatcccagtcccaccc 15879052

---

>gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA,
           complete cds
          Length = 918

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 171 aaggccgacaaggaccccaacaagcccaag 200
           ||||||| ||||||||||||||||||||||
Sbjct: 223 aaggccggcaaggaccccaacaagcccaag 252



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 351 gccaaggccgagaagctcaaggccgagtacaccaag 386
           ||||||||| | ||||||||||||||||||| ||||
Sbjct: 403 gccaaggccaacaagctcaaggccgagtacaacaag 438

---

>dbj|D17776.1|RICAD2812 Oryza sativa mRNA for high mobility group protein, partial sequence
          Length = 260

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 352 ccaaggccgagaagctcaaggccgagtacaccaagaaga-tcaacgcctacaacaac 407
           ||||||| |||||||||||||  | |||||||||| ||| |||||| ||||||||||
Sbjct: 64  ccaaggctgagaagctcaaggatgcgtacaccaagcagattcaacgnctacaacaac 120

---

>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017G10
          Length = 166700

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 171    aaggccgacaaggaccccaacaagcccaag 200
              ||||||| ||||||||||||||||||||||
Sbjct: 115194 aaggccggcaaggaccccaacaagcccaag 115223



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 351    gccaaggccgagaagctcaaggccgagtacaccaag 386
              ||||||||| | ||||||||||||||||||| ||||
Sbjct: 115709 gccaaggccaacaagctcaaggccgagtacaacaag 115744

---

>dbj|AK068898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E23, full
           insert sequence
          Length = 998

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 171 aaggccgacaaggaccccaacaagcccaag 200
           ||||||| ||||||||||||||||||||||
Sbjct: 332 aaggccggcaaggaccccaacaagcccaag 361



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 351 gccaaggccgagaagctcaaggccgagtacaccaag 386
           ||||||||| | ||||||||||||||||||| ||||
Sbjct: 512 gccaaggccaacaagctcaaggccgagtacaacaag 547

---

>dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full
           insert sequence
          Length = 913

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 171 aaggccgacaaggaccccaacaagcccaag 200
           ||||||| ||||||||||||||||||||||
Sbjct: 247 aaggccggcaaggaccccaacaagcccaag 276



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 351 gccaaggccgagaagctcaaggccgagtacaccaag 386
           ||||||||| | ||||||||||||||||||| ||||
Sbjct: 427 gccaaggccaacaagctcaaggccgagtacaacaag 462

---

>gb|AY103575.1| Zea mays PCO080122 mRNA sequence
          Length = 1153

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 324 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 383

             
Query: 231 ga 232
           ||
Sbjct: 384 ga 385

---

>gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds
          Length = 869

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 171 aaggccgacaaggaccccaacaagcccaag 200
           ||||||| ||||||||||||||||||||||
Sbjct: 174 aaggccggcaaggaccccaacaagcccaag 203



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 351 gccaaggccgagaagctcaaggccgagtacaccaag 386
           ||||||||| | ||||||||||||||||||| ||||
Sbjct: 354 gccaaggccaacaagctcaaggccgagtacaacaag 389

---

>ref|XM_468657.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 459 acgacgaggacgacggcagcgagggcga 486
           |||||||||||||||||||||| |||||
Sbjct: 431 acgacgaggacgacggcagcgatggcga 458

---

>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0039N21, complete sequence
          Length = 151732

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 459  acgacgaggacgacggcagcgagggcga 486
            |||||||||||||||||||||| |||||
Sbjct: 9061 acgacgaggacgacggcagcgatggcga 9034

---

>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map
              C12819S, complete sequence
          Length = 113266

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 459    acgacgaggacgacggcagcgagggcga 486
              |||||||||||||||||||||| |||||
Sbjct: 103847 acgacgaggacgacggcagcgatggcga 103820

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 459      acgacgaggacgacggcagcgagggcga 486
                |||||||||||||||||||||| |||||
Sbjct: 16866057 acgacgaggacgacggcagcgatggcga 16866030

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 459      acgacgaggacgacggcagcgagggcga 486
                |||||||||||||||||||||| |||||
Sbjct: 16859630 acgacgaggacgacggcagcgatggcga 16859603

---

>emb|AJ131373.1|ZMA131373 Zea mays hmga gene, exons 1-7
          Length = 2133

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 aaggccgacaaggaccccaacaagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           ||||||| |||||||||||||||||| ||| |  | || ||||| |||||||| ||||||
Sbjct: 297 aaggccggcaaggaccccaacaagcctaagagggctcccagcgctttcttcgtgttcatg 356

---

>dbj|AK110543.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B05, full
           insert sequence
          Length = 1114

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 459 acgacgaggacgacggcagcgagggcga 486
           |||||||||||||||||||||| |||||
Sbjct: 488 acgacgaggacgacggcagcgatggcga 515

---

>gb|L28094.1|BLYCDNA Barley mRNA sequence
          Length = 942

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 161 gaagaagagcaaggccgacaaggaccccaacaagcccaag 200
           ||||||| | ||||| | ||||||||||||||||||||||
Sbjct: 187 gaagaagggaaaggcaggcaaggaccccaacaagcccaag 226

---

>gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL H15), complete
             sequence
          Length = 83684

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 49    cctcctcccagtcccaccccaccacacccct 79
             ||||||||| ||||||||||||| |||||||
Sbjct: 76079 cctcctccctgtcccaccccaccccacccct 76109

---

>gb|AC009320.7| Homo sapiens 12 BAC RP11-310I24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 57166

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 57    cagtcccaccccaccacacccct 79
             |||||||||||||||||||||||
Sbjct: 43258 cagtcccaccccaccacacccct 43280

---

>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence
          Length = 160042

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 49    cctcctcccagtcccaccccaccacacccct 79
             ||||||||| ||||||||||||| |||||||
Sbjct: 23329 cctcctccctgtcccaccccaccccacccct 23359

---

>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 49    cctcctcccagtcccaccccaccacacccct 79
             ||||||||| ||||||||||||| |||||||
Sbjct: 88292 cctcctccctgtcccaccccaccccacccct 88322

---

>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown,
             complete sequence
          Length = 232130

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 49    cctcctcccagtcccaccccaccacacccct 79
             ||||||||| ||||||||||||| |||||||
Sbjct: 84743 cctcctccctgtcccaccccaccccacccct 84773

---

>ref|NM_122249.2| Arabidopsis thaliana HMGB6; transcription factor AT5G23420 (HMGB6)
           mRNA, complete cds
          Length = 987

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 299 cggtggtgagaagtggaagtct 320
           ||||||||||||||||||||||
Sbjct: 506 cggtggtgagaagtggaagtct 527

---

>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106
           (nfd106) mRNA, complete cds
          Length = 625

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 212 cgccttcttcgtcttcatggataccttcaggaaggagt 249
           |||||||||| ||||||||||   ||||||||||||||
Sbjct: 135 cgccttcttcctcttcatggacgacttcaggaaggagt 172

---

>ref|XM_504837.1| Yarrowia lipolytica CLIB122, YALI0F00836g predicted mRNA
          Length = 1869

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 350 tgccaaggccgagaagctcaag 371
           ||||||||||||||||||||||
Sbjct: 711 tgccaaggccgagaagctcaag 732

---

>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
          Length = 163567

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 59     gtcccaccccaccacacccctc 80
              ||||||||||||||||||||||
Sbjct: 113861 gtcccaccccaccacacccctc 113882

---

>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly
           factor D (nfd106) mRNA, complete cds
          Length = 655

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 212 cgccttcttcgtcttcatggataccttcaggaaggagt 249
           |||||||||| ||||||||||   ||||||||||||||
Sbjct: 137 cgccttcttcctcttcatggacgacttcaggaaggagt 174

---

>gb|AY086023.1| Arabidopsis thaliana clone 207075 mRNA, complete sequence
          Length = 973

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 299 cggtggtgagaagtggaagtct 320
           ||||||||||||||||||||||
Sbjct: 491 cggtggtgagaagtggaagtct 512

---

>dbj|AK118688.1| Arabidopsis thaliana At5g23420 mRNA for unknown protein, complete
           cds, clone: RAFL19-95-K07
          Length = 895

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 299 cggtggtgagaagtggaagtct 320
           ||||||||||||||||||||||
Sbjct: 506 cggtggtgagaagtggaagtct 527

---

>dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M13
          Length = 42563

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 299   cggtggtgagaagtggaagtct 320
             ||||||||||||||||||||||
Sbjct: 10781 cggtggtgagaagtggaagtct 10760

---

>gb|AY108096.1| Zea mays PCO136722 mRNA sequence
          Length = 882

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 212 cgccttcttcgtcttcatggataccttcaggaaggagt 249
           |||||||||| ||||||||||   ||||||||||||||
Sbjct: 351 cgccttcttcctcttcatggacgacttcaggaaggagt 388

---

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 350    tgccaaggccgagaagctcaag 371
              ||||||||||||||||||||||
Sbjct: 129870 tgccaaggccgagaagctcaag 129891

---

>ref|XM_473648.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4212

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 39   gcagcgcccgcctcctcccagtcccaccc 67
            |||||||||||| | ||||||||||||||
Sbjct: 2462 gcagcgcccgccgcatcccagtcccaccc 2434

---

>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
            complete sequence
          Length = 126532

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 458  aacgacgaggacgacggcagcgagg 482
            |||||||| ||||||||||||||||
Sbjct: 4976 aacgacgatgacgacggcagcgagg 5000

---

>ref|XM_615468.2| PREDICTED: Bos taurus similar to C34E11.3 (LOC535392), partial mRNA
          Length = 4939

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 765 cccaccccaccacacccctcg 745

---

>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence
          Length = 187758

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    cccaccccaccacacccctcg 81
             |||||||||||||||||||||
Sbjct: 31019 cccaccccaccacacccctcg 31039

---

>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   agtacagggagaagcaccccg 267
             |||||||||||||||||||||
Sbjct: 10988 agtacagggagaagcaccccg 11008

---

>ref|XM_501733.1| Yarrowia lipolytica CLIB122, YALI0C11671g predicted mRNA
          Length = 312

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 303 ggtgagaagtggaagtctctgagtgacgctgagaagg 339
           ||||||||||||||| |||| | ||| ||||||||||
Sbjct: 178 ggtgagaagtggaagactctcactgatgctgagaagg 214

---

>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
             complete sequence
          Length = 186325

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 39    gcagcgcccgcctcctcccagtcccaccc 67
             |||||||||||| | ||||||||||||||
Sbjct: 67204 gcagcgcccgccgcatcccagtcccaccc 67232

---

>gb|BC022952.1| Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family,
           protein F (avian), mRNA (cDNA clone MGC:30560
           IMAGE:5132212), complete cds
          Length = 1832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 588 cccaccccaccacacccctcg 608

---

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 96      ttggcggccggcggcaggatg 116
               |||||||||||||||||||||
Sbjct: 1745135 ttggcggccggcggcaggatg 1745115

---

>dbj|AK096542.1| Homo sapiens cDNA FLJ39223 fis, clone OCBBF2007184, moderately
           similar to ZINC FINGER PROTEIN 135
          Length = 2666

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 92  aaggttggcggccggcggcag 112
           |||||||||||||||||||||
Sbjct: 38  aaggttggcggccggcggcag 18

---

>dbj|AK146043.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530025O07
           product:v-maf musculoaponeurotic fibrosarcoma oncogene
           family, protein F (avian), full insert sequence
          Length = 1875

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 666 cccaccccaccacacccctcg 686

---

>dbj|AK145835.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530004H14
           product:v-maf musculoaponeurotic fibrosarcoma oncogene
           family, protein F (avian), full insert sequence
          Length = 1905

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 697 cccaccccaccacacccctcg 717

---

>dbj|AK156896.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830106B04 product:v-maf
           musculoaponeurotic fibrosarcoma oncogene family, protein
           F (avian), full insert sequence
          Length = 1932

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 725 cccaccccaccacacccctcg 745

---

>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 247    agtacagggagaagcaccccg 267
              |||||||||||||||||||||
Sbjct: 131144 agtacagggagaagcaccccg 131164

---

>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 247    agtacagggagaagcaccccg 267
              |||||||||||||||||||||
Sbjct: 131144 agtacagggagaagcaccccg 131164

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 39       gcagcgcccgcctcctcccagtcccaccc 67
                |||||||||||| | ||||||||||||||
Sbjct: 29394188 gcagcgcccgccgcatcccagtcccaccc 29394216



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 461      gacgaggacgacggcagcgagggcgacg 488
                ||||| |||||||||||||||| |||||
Sbjct: 32886398 gacgacgacgacggcagcgaggacgacg 32886425

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 247      agtacagggagaagcaccccg 267
                |||||||||||||||||||||
Sbjct: 21128829 agtacagggagaagcaccccg 21128849

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 39       gcagcgcccgcctcctcccagtcccaccc 67
                |||||||||||| | ||||||||||||||
Sbjct: 11110317 gcagcgcccgccgcatcccagtcccaccc 11110345

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 458      aacgacgaggacgacggcagcgagg 482
                |||||||| ||||||||||||||||
Sbjct: 21885762 aacgacgatgacgacggcagcgagg 21885786

---

>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0045F02
          Length = 143668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 39    gcagcgcccgcctcctcccagtcccaccc 67
             |||||||||||| | ||||||||||||||
Sbjct: 92836 gcagcgcccgccgcatcccagtcccaccc 92864

---

>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 39    gcagcgcccgcctcctcccagtcccaccc 67
             |||||||||||| | ||||||||||||||
Sbjct: 12529 gcagcgcccgccgcatcccagtcccaccc 12501

---

>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0026P23
          Length = 180188

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 39    gcagcgcccgcctcctcccagtcccaccc 67
             |||||||||||| | ||||||||||||||
Sbjct: 92083 gcagcgcccgccgcatcccagtcccaccc 92055

---

>dbj|AK069449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020E21, full
           insert sequence
          Length = 1169

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 agtacagggagaagcaccccg 267
           |||||||||||||||||||||
Sbjct: 410 agtacagggagaagcaccccg 430

---

>dbj|AK063748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G07, full
           insert sequence
          Length = 647

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 458 aacgacgaggacgacggcagcgagg 482
           |||||||| ||||||||||||||||
Sbjct: 218 aacgacgatgacgacggcagcgagg 242

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 247      agtacagggagaagcaccccg 267
                |||||||||||||||||||||
Sbjct: 21439070 agtacagggagaagcaccccg 21439090

---

>ref|NM_010755.2| Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family,
           protein F (avian) (Maff), mRNA
          Length = 1832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  cccaccccaccacacccctcg 81
           |||||||||||||||||||||
Sbjct: 588 cccaccccaccacacccctcg 608

---

>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 303     ggtgagaagtggaagtctctgagtgacgctgagaagg 339
               ||||||||||||||| |||| | ||| ||||||||||
Sbjct: 1612201 ggtgagaagtggaagactctcactgatgctgagaagg 1612165

---

>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete
             sequence
          Length = 196812

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    cccaccccaccacacccctcg 81
             |||||||||||||||||||||
Sbjct: 89570 cccaccccaccacacccctcg 89550

---

>dbj|AB009694.1| Mus musculus gene for mafF, complete cds
          Length = 2699

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   cccaccccaccacacccctcg 81
            |||||||||||||||||||||
Sbjct: 1844 cccaccccaccacacccctcg 1864

---

>ref|XM_474100.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 461 gacgaggacgacggcagcgagggcgacg 488
           ||||| |||||||||||||||| |||||
Sbjct: 392 gacgacgacgacggcagcgaggacgacg 365

---

>ref|NM_197049.1| Oryza sativa (japonica cultivar-group) putative nodulin
           (OSJNBa0012L23.46), mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 ccgagaagctcaaggccgag 377
           ||||||||||||||||||||
Sbjct: 938 ccgagaagctcaaggccgag 957

---

>ref|NM_197047.1| Oryza sativa (japonica cultivar-group) putative nodulin
           (OSJNBa0012L23.44), mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 ccgagaagctcaaggccgag 377
           ||||||||||||||||||||
Sbjct: 923 ccgagaagctcaaggccgag 942

---

>gb|BT016444.1| Zea mays clone Contig277 mRNA sequence
          Length = 1158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 191 caagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           |||||||||||| || ||   |||||||||||||||||||
Sbjct: 81  caagcccaagcgccctccctccgccttcttcgtcttcatg 120

---

>gb|AY172651.1| Sus scrofa delta-like 1 protein (DLK1) gene, partial cds
          Length = 456

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cttcatggataccttcagga 243
           ||||||||||||||||||||
Sbjct: 324 cttcatggataccttcagga 305

---

>gb|AC099038.2| Drosophila melanogaster clone BACR28A23, complete sequence
          Length = 164826

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 61     cccaccccaccacacccctcgctc 84
              ||||||||||| ||||||||||||
Sbjct: 120482 cccaccccaccccacccctcgctc 120505

---

>ref|XM_365573.1| Magnaporthe grisea 70-15 hypothetical protein (MG02275.4) partial
           mRNA
          Length = 1590

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aggccgagaagctcaaggcc 374
           ||||||||||||||||||||
Sbjct: 707 aggccgagaagctcaaggcc 726

---

>gb|AF049107.1| Myxococcus xanthus response regulator FrzZ (frzZ) gene, partial cds;
            alanine dehydrogenase (aldA), putative ECF sigma factor
            RpoE1 (rpoE1), and response regulator homolog (frzS)
            genes, complete cds; and unknown genes
          Length = 8046

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  cgagcgccttcttcgtcttc 227
            ||||||||||||||||||||
Sbjct: 7191 cgagcgccttcttcgtcttc 7172

---

>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete
             sequence
          Length = 211002

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    gcctcctcccagtcccaccccacc 71
             ||||||||| ||||||||||||||
Sbjct: 35034 gcctcctccgagtcccaccccacc 35011

---

>gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, complete sequence
          Length = 202319

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctcctcccagtcccacccca 69
             ||||||||||||||||||||
Sbjct: 23198 ctcctcccagtcccacccca 23179

---

>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence
          Length = 266344

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   caggaaggagtacagggaga 258
             ||||||||||||||||||||
Sbjct: 67396 caggaaggagtacagggaga 67377

---

>gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosome 16, complete
             sequence
          Length = 167118

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    gcctcctcccagtcccaccccacc 71
             ||||||||| ||||||||||||||
Sbjct: 57715 gcctcctccgagtcccaccccacc 57738

---

>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence
          Length = 208757

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ctcctcccagtcccacccca 69
              ||||||||||||||||||||
Sbjct: 166380 ctcctcccagtcccacccca 166361

---

>gb|AY170467.1| Leishmania mexicana mexicana delta adpatin gene, complete cds
          Length = 5118

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  gacgaggacgacggcagcga 480
            ||||||||||||||||||||
Sbjct: 3504 gacgaggacgacggcagcga 3523

---

>gb|AC006325.3| Homo sapiens BAC clone GS1-207A4 from 7, complete sequence
          Length = 60129

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   cccaccccaccacacccctc 80
            ||||||||||||||||||||
Sbjct: 4443 cccaccccaccacacccctc 4462

---

>gb|AC142309.1| Pan troglodytes BAC clone RP43-45E24 from 7, complete sequence
          Length = 186055

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     cccaccccaccacacccctc 80
              ||||||||||||||||||||
Sbjct: 177203 cccaccccaccacacccctc 177184

---

>emb|Y08298.1|ZMHMGC2 Z.mays mRNA for HMGc2 protein
          Length = 828

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 191 caagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           |||||||||||| || ||   |||||||||||||||||||
Sbjct: 96  caagcccaagcgccctccctccgccttcttcgtcttcatg 135

---

>emb|Y08297.1|ZMHMGC1 Z.mays mRNA for HMGc1 protein
          Length = 784

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 191 caagcccaagcgacccccgagcgccttcttcgtcttcatg 230
           |||||||||||| || ||   |||||||||||||||||||
Sbjct: 181 caagcccaagcgcccgccctccgccttcttcgtcttcatg 220

---

>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ggccggcggcaggatgaagg 120
             ||||||||||||||||||||
Sbjct: 76715 ggccggcggcaggatgaagg 76696

---

>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ggccggcggcaggatgaagg 120
              ||||||||||||||||||||
Sbjct: 149737 ggccggcggcaggatgaagg 149718

---

>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11,
             complete sequence
          Length = 134231

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 461   gacgaggacgacggcagcgagggcgacg 488
             ||||| |||||||||||||||| |||||
Sbjct: 29247 gacgacgacgacggcagcgaggacgacg 29274

---

>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8
          Length = 98192

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccgcgccggcggctccaggc 153
             ||||||||||||||||||||
Sbjct: 77581 ccgcgccggcggctccaggc 77600

---

>emb|AJ431260.1|UNK431260 Uncultured bacterium plasmid pB4 complete genome
          Length = 79370

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  ccgcgccggcggctccaggc 153
            ||||||||||||||||||||
Sbjct: 7492 ccgcgccggcggctccaggc 7511

---

>emb|AJ131374.1|ZMA131374 Zea mays hmgc1 gene, exons 1-7
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 191  caagcccaagcgacccccgagcgccttcttcgtcttcatg 230
            |||||||||||| || ||   |||||||||||||||||||
Sbjct: 1383 caagcccaagcgcccgccctccgccttcttcgtcttcatg 1422

---

>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a
             ribosomal protein S13 (Rps13) pseudogene, a ribosomal
             protein S27 (Rps27) pseudogene a novel genes and the 3'
             end of a novel gene, complete sequence
          Length = 218950

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    cctcctcccagtcccacccc 68
             ||||||||||||||||||||
Sbjct: 84983 cctcctcccagtcccacccc 85002

---

>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete
             sequence
          Length = 153182

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   ccgagaagctcaaggccgag 377
             ||||||||||||||||||||
Sbjct: 66178 ccgagaagctcaaggccgag 66159



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   ccgagaagctcaaggccgag 377
             ||||||||||||||||||||
Sbjct: 55510 ccgagaagctcaaggccgag 55491

---

>dbj|AB231906.2| Sphingomonas sp. A1 plasmid pA1 DNA, complete sequence
          Length = 46557

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccgcgccggcggctccaggc 153
             ||||||||||||||||||||
Sbjct: 27898 ccgcgccggcggctccaggc 27917



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccgcgccggcggctccaggc 153
             ||||||||||||||||||||
Sbjct: 25558 ccgcgccggcggctccaggc 25577

---

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     tcaaggccgagtacaccaag 386
               ||||||||||||||||||||
Sbjct: 2223434 tcaaggccgagtacaccaag 2223415

---

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    gatgaaggccaaggcgggat 132
              ||||||||||||||||||||
Sbjct: 668795 gatgaaggccaaggcgggat 668776

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     cgacgaggacgacggcagcg 479
               ||||||||||||||||||||
Sbjct: 9208680 cgacgaggacgacggcagcg 9208699

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      ccgagaagctcaaggccgag 377
                ||||||||||||||||||||
Sbjct: 17711058 ccgagaagctcaaggccgag 17711039



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      ccgagaagctcaaggccgag 377
                ||||||||||||||||||||
Sbjct: 17700390 ccgagaagctcaaggccgag 17700371

---

>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete
             sequence
          Length = 159324

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   caggaaggagtacagggaga 258
             ||||||||||||||||||||
Sbjct: 10444 caggaaggagtacagggaga 10425

---

>gb|AC009365.9|AC009365 Homo sapiens chromosome 7 clone RP11-355K3, complete sequence
          Length = 222794

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ctcctcccagtcccacccca 69
              ||||||||||||||||||||
Sbjct: 150140 ctcctcccagtcccacccca 150121

---

>gb|AY007208.1| Sus scrofa Pref-1 gene, partial cds
          Length = 405

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cttcatggataccttcagga 243
           ||||||||||||||||||||
Sbjct: 303 cttcatggataccttcagga 284

---

>gb|AF502250.1| Triticum aestivum HMG-I/Y protein HMGa (HMGa) gene, complete cds
          Length = 989

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 179 caaggaccccaacaagcccaagcg 202
           |||||||||||||| |||||||||
Sbjct: 510 caaggaccccaacacgcccaagcg 533

---

>dbj|AK106352.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A01, full
           insert sequence
          Length = 2036

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 460 cgacgaggacgacggcagcg 479
           ||||||||||||||||||||
Sbjct: 55  cgacgaggacgacggcagcg 74

---

>dbj|AK067139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O17, full
           insert sequence
          Length = 885

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 461 gacgaggacgacggcagcgagggcgacg 488
           ||||| |||||||||||||||| |||||
Sbjct: 538 gacgacgacgacggcagcgaggacgacg 511

---

>gb|AY110080.1| Zea mays CL3663_1 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 agtacagggagaagcacccc 266
           ||||||||||||||||||||
Sbjct: 103 agtacagggagaagcacccc 122

---

>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete
            sequence
          Length = 123337

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 461  gacgaggacgacggcagcgagggcgacg 488
            ||||| |||||||||||||||| |||||
Sbjct: 9478 gacgacgacgacggcagcgaggacgacg 9505

---

>gb|AC006409.2|AC006409 Homo sapiens Chromosome 11q12.2 PAC clone pDJ52b24 containing homology
             to human acidic ribosomal phosphoprotein PO cds, complete
             sequence
          Length = 114339

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   acgtcaagctggcctccgtg 287
             ||||||||||||||||||||
Sbjct: 50380 acgtcaagctggcctccgtg 50361

---

>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
              sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 61     cccaccccaccacacccctcgctc 84
              ||||||||||| ||||||||||||
Sbjct: 260488 cccaccccaccccacccctcgctc 260511

---

>dbj|AP003559.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-794G24, complete
              sequence
          Length = 181439

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    acgtcaagctggcctccgtg 287
              ||||||||||||||||||||
Sbjct: 172801 acgtcaagctggcctccgtg 172820

---

>dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-855O10, complete
            sequence
          Length = 185766

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  acgtcaagctggcctccgtg 287
            ||||||||||||||||||||
Sbjct: 2917 acgtcaagctggcctccgtg 2936

---

>dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2528N2, complete
             sequences
          Length = 208600

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    cctcccagtcccaccccacc 71
             ||||||||||||||||||||
Sbjct: 54671 cctcccagtcccaccccacc 54652

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      ccgagaagctcaaggccgag 377
                ||||||||||||||||||||
Sbjct: 17720311 ccgagaagctcaaggccgag 17720292



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      ccgagaagctcaaggccgag 377
                ||||||||||||||||||||
Sbjct: 17709643 ccgagaagctcaaggccgag 17709624

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     cgacgaggacgacggcagcg 479
               ||||||||||||||||||||
Sbjct: 9208565 cgacgaggacgacggcagcg 9208584

---

>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104533

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   cgacgaggacgacggcagcg 479
             ||||||||||||||||||||
Sbjct: 64570 cgacgaggacgacggcagcg 64589

---

>gb|AC145744.3| Mus musculus BAC clone RP24-142P6 from 16, complete sequence
          Length = 207240

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    gcctcctcccagtcccaccccacc 71
             ||||||||| ||||||||||||||
Sbjct: 71052 gcctcctccgagtcccaccccacc 71075

---

>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 215     cttcttcgtcttcatggataccttcaggaagg 246
               |||||||| ||||||||||  |||||||||||
Sbjct: 2198996 cttcttcggcttcatggatttcttcaggaagg 2199027

---

>emb|CR956367.12| Pig DNA sequence from clone PigE-122C21 on chromosome 17, complete
             sequence
          Length = 124577

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   cccgcgccggcggctccagg 152
             ||||||||||||||||||||
Sbjct: 55106 cccgcgccggcggctccagg 55087


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,940,547
Number of Sequences: 3902068
Number of extensions: 3940547
Number of successful extensions: 104358
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 103460
Number of HSP's gapped (non-prelim): 878
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---