ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64f01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 65.9 bits (33), Expect = 7e-08 Identities = 57/65 (87%) Strand = Plus / Minus Query: 84 cacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttc 143 |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||||| Sbjct: 125550 cacctcgccgccgccctcgccgccacgctccgcgcctactaccccgtcgccggccgcttc 125491 Query: 144 gtcac 148 ||||| Sbjct: 125490 gtcac 125486 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 tgctctcctccaaagacatccagaagggcctcctcttc 38 |||||||| |||| ||||||||||||||||||||||| Sbjct: 125645 tgctctccgccaactacatccagaagggcctcctcttc 125608 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Minus Query: 216 cagggagtcgagctcgtccacgccgtggccgacggggtggccatggcggacgtcgtcccg 275 ||||| |||||| ||||||||||||| |||| ||| || | | || ||||||||||| Sbjct: 125433 cagggcgtcgagatcgtccacgccgtcgccggcggcgtctcggtcgccgacgtcgtccct 125374 Query: 276 cccgacgccgacg 288 ||||||||||||| Sbjct: 125373 cccgacgccgacg 125361
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 65.9 bits (33), Expect = 7e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 84 cacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttc 143 |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||||| Sbjct: 49803 cacctcgccgccgccctcgccgccacgctccgcgcctactaccccgtcgccggccgcttc 49862 Query: 144 gtcac 148 ||||| Sbjct: 49863 gtcac 49867 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 tgctctcctccaaagacatccagaagggcctcctcttc 38 |||||||| |||| ||||||||||||||||||||||| Sbjct: 49708 tgctctccgccaactacatccagaagggcctcctcttc 49745 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 216 cagggagtcgagctcgtccacgccgtggccgacggggtggccatggcggacgtcgtcccg 275 ||||| |||||| ||||||||||||| |||| ||| || | | || ||||||||||| Sbjct: 49920 cagggcgtcgagatcgtccacgccgtcgccggcggcgtctcggtcgccgacgtcgtccct 49979 Query: 276 cccgacgccgacg 288 ||||||||||||| Sbjct: 49980 cccgacgccgacg 49992
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 7e-08 Identities = 57/65 (87%) Strand = Plus / Minus Query: 84 cacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttc 143 |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||||| Sbjct: 7666464 cacctcgccgccgccctcgccgccacgctccgcgcctactaccccgtcgccggccgcttc 7666405 Query: 144 gtcac 148 ||||| Sbjct: 7666404 gtcac 7666400 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 tgctctcctccaaagacatccagaagggcctcctcttc 38 |||||||| |||| ||||||||||||||||||||||| Sbjct: 7666559 tgctctccgccaactacatccagaagggcctcctcttc 7666522 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Minus Query: 216 cagggagtcgagctcgtccacgccgtggccgacggggtggccatggcggacgtcgtcccg 275 ||||| |||||| ||||||||||||| |||| ||| || | | || ||||||||||| Sbjct: 7666347 cagggcgtcgagatcgtccacgccgtcgccggcggcgtctcggtcgccgacgtcgtccct 7666288 Query: 276 cccgacgccgacg 288 ||||||||||||| Sbjct: 7666287 cccgacgccgacg 7666275
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 7e-08 Identities = 57/65 (87%) Strand = Plus / Minus Query: 84 cacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttc 143 |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||||| Sbjct: 7736551 cacctcgccgccgccctcgccgccacgctccgcgcctactaccccgtcgccggccgcttc 7736492 Query: 144 gtcac 148 ||||| Sbjct: 7736491 gtcac 7736487 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 tgctctcctccaaagacatccagaagggcctcctcttc 38 |||||||| |||| ||||||||||||||||||||||| Sbjct: 7736646 tgctctccgccaactacatccagaagggcctcctcttc 7736609 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Minus Query: 216 cagggagtcgagctcgtccacgccgtggccgacggggtggccatggcggacgtcgtcccg 275 ||||| |||||| ||||||||||||| |||| ||| || | | || ||||||||||| Sbjct: 7736434 cagggcgtcgagatcgtccacgccgtcgccggcggcgtctcggtcgccgacgtcgtccct 7736375 Query: 276 cccgacgccgacg 288 ||||||||||||| Sbjct: 7736374 cccgacgccgacg 7736362
>ref|NM_186258.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1428 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 87 ctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttcg 144 ||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 199 ctcgccgccgccctcgccgacgcgctccacgtgtactaccccgtcgccggccgcttcg 256 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 |||||||||||||||||||||||| Sbjct: 140 acatccagaagggcctcctcttcc 163 Score = 46.1 bits (23), Expect = 0.064 Identities = 53/63 (84%) Strand = Plus / Plus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| | | || ||||||||||||| || Sbjct: 279 cggctgctccgtctccatcgactgcgacggccagggcgcccagatcgtccacgccgtcgc 338 Query: 245 cga 247 ||| Sbjct: 339 cga 341
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 87 ctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttcg 144 ||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 2220893 ctcgccgccgccctcgccgacgcgctccacgtgtactaccccgtcgccggccgcttcg 2220836 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 acatccagaagggcctcctcttcc 39 |||||||||||||||||||||||| Sbjct: 2220952 acatccagaagggcctcctcttcc 2220929 Score = 46.1 bits (23), Expect = 0.064 Identities = 53/63 (84%) Strand = Plus / Minus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| | | || ||||||||||||| || Sbjct: 2220813 cggctgctccgtctccatcgactgcgacggccagggcgcccagatcgtccacgccgtcgc 2220754 Query: 245 cga 247 ||| Sbjct: 2220753 cga 2220751 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 99 ctcgcccacgcgctcctccactactaccccatcgccgg 136 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 21801426 ctcgccgacgcgctcgtgcactactaccccgtcgccgg 21801463
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 87 ctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccgcttcg 144 ||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||||| Sbjct: 88795 ctcgccgccgccctcgccgacgcgctccacgtgtactaccccgtcgccggccgcttcg 88738 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 acatccagaagggcctcctcttcc 39 |||||||||||||||||||||||| Sbjct: 88854 acatccagaagggcctcctcttcc 88831 Score = 46.1 bits (23), Expect = 0.064 Identities = 53/63 (84%) Strand = Plus / Minus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| | | || ||||||||||||| || Sbjct: 88715 cggctgctccgtctccatcgactgcgacggccagggcgcccagatcgtccacgccgtcgc 88656 Query: 245 cga 247 ||| Sbjct: 88655 cga 88653
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 80 cgaccacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccg 139 |||||||||||||||||| ||| || | ||||| | |||||||||| |||||||||| Sbjct: 212228 cgaccacctcgccgccgccctctccaccacgctcaacacctactaccccgtcgccggccg 212287 Query: 140 cttcgtcac 148 ||||||||| Sbjct: 212288 cttcgtcac 212296 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||| || Sbjct: 212321 cggctgctccgtctccatcgactgcgacggccagggcgtccagatcgtccacgccgtcgc 212380 Query: 245 cga 247 ||| Sbjct: 212381 cga 212383 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 30389409 ccgccgaccacctcgccgccg 30389389 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 cccgcccgacgccgacgcgccgcgc 296 |||||||||||||| |||||||||| Sbjct: 23460018 cccgcccgacgccgccgcgccgcgc 23459994 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctactaccccatcgccggccg 139 ||||||||||||||||||||| Sbjct: 23055450 ctactaccccatcgccggccg 23055470 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 25451411 cgccgccgacaacctcgccgccgc 25451434
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 80 cgaccacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccg 139 |||||||||||||||||| ||| || | ||||| | |||||||||| |||||||||| Sbjct: 77124 cgaccacctcgccgccgccctctccaccacgctcaacacctactaccccgtcgccggccg 77183 Query: 140 cttcgtcac 148 ||||||||| Sbjct: 77184 cttcgtcac 77192 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||| || Sbjct: 77217 cggctgctccgtctccatcgactgcgacggccagggcgtccagatcgtccacgccgtcgc 77276 Query: 245 cga 247 ||| Sbjct: 77277 cga 77279
>dbj|AK110874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F10, full insert sequence Length = 1526 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 80 cgaccacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccg 139 |||||||||||||||||| ||| || | ||||| | |||||||||| |||||||||| Sbjct: 1211 cgaccacctcgccgccgccctctccaccacgctcaacacctactaccccgtcgccggccg 1152 Query: 140 cttcgtcac 148 ||||||||| Sbjct: 1151 cttcgtcac 1143 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||| || Sbjct: 1118 cggctgctccgtctccatcgactgcgacggccagggcgtccagatcgtccacgccgtcgc 1059 Query: 245 cga 247 ||| Sbjct: 1058 cga 1056
>dbj|AK103757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143E17, full insert sequence Length = 1677 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 80 cgaccacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccg 139 |||||||||||||||||| ||| || | ||||| | |||||||||| |||||||||| Sbjct: 210 cgaccacctcgccgccgccctctccaccacgctcaacacctactaccccgtcgccggccg 269 Query: 140 cttcgtcac 148 ||||||||| Sbjct: 270 cttcgtcac 278 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||| || Sbjct: 303 cggctgctccgtctccatcgactgcgacggccagggcgtccagatcgtccacgccgtcgc 362 Query: 245 cga 247 ||| Sbjct: 363 cga 365
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 80 cgaccacctcgccgccgcactcgcccacgcgctcctccactactaccccatcgccggccg 139 |||||||||||||||||| ||| || | ||||| | |||||||||| |||||||||| Sbjct: 8314 cgaccacctcgccgccgccctctccaccacgctcaacacctactaccccgtcgccggccg 8255 Query: 140 cttcgtcac 148 ||||||||| Sbjct: 8254 cttcgtcac 8246 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 185 cggctgctccgtccatgtcgactgcgccggccagggagtcgagctcgtccacgccgtggc 244 ||||||||||||| ||||||||| ||||||||| ||| || ||||||||||||| || Sbjct: 8221 cggctgctccgtctccatcgactgcgacggccagggcgtccagatcgtccacgccgtcgc 8162 Query: 245 cga 247 ||| Sbjct: 8161 cga 8159
>ref|NM_192785.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgc 140 |||||| |||||||||||||| ||||||||||| Sbjct: 208 gcgctcgtccactactaccccgtcgccggccgc 240
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 108 gcgctcctccactactaccccatcgccggccgc 140 |||||| |||||||||||||| ||||||||||| Sbjct: 24396482 gcgctcgtccactactaccccgtcgccggccgc 24396450 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 cccctcatcctcgccctcgccct 69 ||||||||||||||||||||||| Sbjct: 35335175 cccctcatcctcgccctcgccct 35335153 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 6541778 cgccgaccacctcgccgccgc 6541758 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 ||||||||||||||||| |||||| Sbjct: 36788485 acatccagaagggcctcttcttcc 36788508 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 tcgccctcgcccttcaacgccgcc 80 ||||||||||||||| |||||||| Sbjct: 6586466 tcgccctcgcccttccacgccgcc 6586489
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 108 gcgctcctccactactaccccatcgccggccgc 140 |||||| |||||||||||||| ||||||||||| Sbjct: 142386 gcgctcgtccactactaccccgtcgccggccgc 142354
>dbj|AK069226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014K19, full insert sequence Length = 1562 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgc 140 |||||| |||||||||||||| ||||||||||| Sbjct: 283 gcgctcgtccactactaccccgtcgccggccgc 315
>dbj|AK061211.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D05, full insert sequence Length = 1556 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgc 140 |||||| |||||||||||||| ||||||||||| Sbjct: 249 gcgctcgtccactactaccccgtcgccggccgc 281
>ref|NM_190409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 375 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 cccctcatcctcgccctcgccct 69 ||||||||||||||||||||||| Sbjct: 111 cccctcatcctcgccctcgccct 89
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 cccctcatcctcgccctcgccct 69 ||||||||||||||||||||||| Sbjct: 99036 cccctcatcctcgccctcgccct 99014
>ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgcttcgt 145 |||||| ||||||||||||| ||||||||||| |||| Sbjct: 208 gcgctcgtccactactacccgctcgccggccgcatcgt 245
>ref|XM_474639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 206 actactaccccatcgccggccg 227
>ref|XM_474623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 tccactactaccccatcgccggccgc 140 |||||||||||||| ||||||||||| Sbjct: 194 tccactactaccccttcgccggccgc 219
>ref|XM_474776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 209 actactaccccatcgccggccg 230
>ref|XM_478648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1628 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 99 ctcgcccacgcgctcctccactactaccccatcgccgg 136 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 284 ctcgccgacgcgctcgtgcactactaccccgtcgccgg 321
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgcttcgt 145 |||||| ||||||||||||| ||||||||||| |||| Sbjct: 86742 gcgctcgtccactactacccgctcgccggccgcatcgt 86779
>emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1168G10, complete sequence Length = 142295 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 tccactactaccccatcgccggccgc 140 |||||||||||||| ||||||||||| Sbjct: 68517 tccactactaccccttcgccggccgc 68492
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 94036 actactaccccatcgccggccg 94015
>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06, complete sequence Length = 147676 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 tccactactaccccatcgccggccgc 140 |||||||||||||| ||||||||||| Sbjct: 2263 tccactactaccccttcgccggccgc 2238
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 6436849 actactaccccatcgccggccg 6436870 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 5117763 actactaccccatcgccggccg 5117742 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 tccactactaccccatcgccggccgc 140 |||||||||||||| ||||||||||| Sbjct: 4889855 tccactactaccccttcgccggccgc 4889830 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 23778362 cgccgaccacctcgccgccgc 23778382 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcgccgccgcactcgcccacgc 109 |||||||||||| ||||||||||| Sbjct: 22314510 cctcgccgccgccctcgcccacgc 22314487 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 12477879 ggacgacctcaccggcgccg 12477860
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 acgacctcaccggcgccgtcgtcggc 188 |||||||| ||||||||||||||||| Sbjct: 1027665 acgacctcgccggcgccgtcgtcggc 1027690 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gcgccgtcgtcggctgctccg 195 ||||||||||||||||||||| Sbjct: 27188506 gcgccgtcgtcggctgctccg 27188486 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 aaggacgacctcaccggcgccgtcgtcg 186 |||| ||||||||||||||||| ||||| Sbjct: 24931779 aaggccgacctcaccggcgccggcgtcg 24931806
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgcttcgt 145 |||||| ||||||||||||| ||||||||||| |||| Sbjct: 3209025 gcgctcgtccactactacccgctcgccggccgcatcgt 3209062 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acgccgccgaccacctcgccg 93 ||||||||||||||||||||| Sbjct: 25417847 acgccgccgaccacctcgccg 25417827
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 99 ctcgcccacgcgctcctccactactaccccatcgccgg 136 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 118609 ctcgccgacgcgctcgtgcactactaccccgtcgccgg 118646
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 acgacctcaccggcgccgtcgtcggc 188 |||||||| ||||||||||||||||| Sbjct: 56192 acgacctcgccggcgccgtcgtcggc 56217
>dbj|AK109553.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C01, full insert sequence Length = 1642 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 99 ctcgcccacgcgctcctccactactaccccatcgccgg 136 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 284 ctcgccgacgcgctcgtgcactactaccccgtcgccgg 321
>dbj|AK064755.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G03, full insert sequence Length = 1455 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 tccactactaccccatcgccggccgc 140 |||||||||||||| ||||||||||| Sbjct: 266 tccactactaccccttcgccggccgc 291
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 99 ctcgcccacgcgctcctccactactaccccatcgccgg 136 |||||| |||||||| | |||||||||||| ||||||| Sbjct: 15102 ctcgccgacgcgctcgtgcactactaccccgtcgccgg 15139
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 actactaccccatcgccggccg 139 |||||||||||||||||||||| Sbjct: 98998 actactaccccatcgccggccg 99019
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 gcgctcctccactactaccccatcgccggccgcttcgt 145 |||||| ||||||||||||| ||||||||||| |||| Sbjct: 2849 gcgctcgtccactactacccgctcgccggccgcatcgt 2886
>ref|NM_188489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1887 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 1080 cgccgaccacctcgccgccgc 1100
>ref|XM_475711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acgccgccgaccacctcgccg 93 ||||||||||||||||||||| Sbjct: 803 acgccgccgaccacctcgccg 783
>ref|XM_472863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5982 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 2247 cgccgaccacctcgccgccgc 2267
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 cccccctcatcctcgccctcgccct 69 |||||||| |||||||||||||||| Sbjct: 1027850 cccccctcctcctcgccctcgccct 1027874
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 gactgcgccggccagggagtcgagc 228 |||||||||||||||| |||||||| Sbjct: 2066923 gactgcgccggccaggaagtcgagc 2066899
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acgccgccgaccacctcgccg 93 ||||||||||||||||||||| Sbjct: 58208 acgccgccgaccacctcgccg 58188
>ref|XM_570620.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03720) partial mRNA Length = 1797 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 cccccctcatcctcgccctcgccct 69 |||||||| |||||||||||||||| Sbjct: 104 cccccctcctcctcgccctcgccct 128
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aaggacgacctcaccggcgcc 179 ||||||||||||||||||||| Sbjct: 166282 aaggacgacctcaccggcgcc 166262
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 99274 cgccgaccacctcgccgccgc 99294
>dbj|D10838.1|RICSBE1 Oryza sativa (japonica cultivar-group) gene for starch branching enzyme Length = 11700 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 3736 ccgccgaccacctcgccgccg 3756
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgca 98 |||||||||||||| |||||||||| Sbjct: 3178952 cgccgccgaccaccacgccgccgca 3178928
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 actactaccccatcgccggccgctt 142 |||||||||| |||||||||||||| Sbjct: 16097933 actactacccgatcgccggccgctt 16097909
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489G09 Length = 148707 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 109258 cgccgaccacctcgccgccgc 109238
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 21949 cgccgaccacctcgccgccgc 21929 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 tcgccctcgcccttcaacgccgcc 80 ||||||||||||||| |||||||| Sbjct: 66637 tcgccctcgcccttccacgccgcc 66660
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctactaccccatcgccggccg 139 ||||||||||||||||||||| Sbjct: 121994 ctactaccccatcgccggccg 122014
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.00 Identities = 33/37 (89%) Strand = Plus / Minus Query: 73 acgccgccgaccacctcgccgccgcactcgcccacgc 109 ||||||||||| ||| ||||| ||| ||||||||||| Sbjct: 5724446 acgccgccgacgaccccgccgacgccctcgcccacgc 5724410 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gcccgacgccgacgcgccgc 294 |||||||||||||||||||| Sbjct: 4435081 gcccgacgccgacgcgccgc 4435100
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 26770 ccgccgaccacctcgccgccg 26750
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 136004 ccgccgaccacctcgccgccg 135984
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 cccgcccgacgccgacgcgccgcgc 296 |||||||||||||| |||||||||| Sbjct: 119573 cccgcccgacgccgccgcgccgcgc 119549
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctactaccccatcgccggccg 139 ||||||||||||||||||||| Sbjct: 6098 ctactaccccatcgccggccg 6118
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gcgccgtcgtcggctgctccg 195 ||||||||||||||||||||| Sbjct: 89539 gcgccgtcgtcggctgctccg 89519
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gcgccgtcgtcggctgctccg 195 ||||||||||||||||||||| Sbjct: 11709 gcgccgtcgtcggctgctccg 11689
>dbj|AK120657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E04, full insert sequence Length = 1507 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctactaccccatcgccggccg 139 ||||||||||||||||||||| Sbjct: 304 ctactaccccatcgccggccg 324
>dbj|AK120332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058O09, full insert sequence Length = 628 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 77 ccgccgaccacctcgccgccg 97
>dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B06, full insert sequence Length = 3209 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 2260 cgccgaccacctcgccgccgc 2280
>dbj|AK110196.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-B01, full insert sequence Length = 3070 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acgccgccgaccacctcgccg 93 ||||||||||||||||||||| Sbjct: 2467 acgccgccgaccacctcgccg 2447
>dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F10, full insert sequence Length = 1966 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cgccgaccacctcgccgccgc 97 ||||||||||||||||||||| Sbjct: 1668 cgccgaccacctcgccgccgc 1648
>dbj|AK068920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170H02, full insert sequence Length = 3827 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ccgccgaccacctcgccgccg 96 ||||||||||||||||||||| Sbjct: 60 ccgccgaccacctcgccgccg 80
>dbj|AK068854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170J18, full insert sequence Length = 1328 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 acgccgccgaccacctcgccg 93 ||||||||||||||||||||| Sbjct: 234 acgccgccgaccacctcgccg 254
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 actactaccccatcgccggccgctt 142 |||||||||| |||||||||||||| Sbjct: 16051166 actactacccgatcgccggccgctt 16051142
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 actactaccccatcgccggccgctt 142 |||||||||| |||||||||||||| Sbjct: 145410 actactacccgatcgccggccgctt 145434
>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 ||||||||||| |||||||||||| Sbjct: 76228 cgccgccgaccgcctcgccgccgc 76251
>ref|NM_188495.1| Oryza sativa (japonica cultivar-group), Ozsa8164 predicted mRNA Length = 510 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tcgccctcgcccttcaacgccgcc 80 ||||||||||||||| |||||||| Sbjct: 389 tcgccctcgcccttccacgccgcc 366
>ref|XM_483229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2900 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 aaggacgacctcaccggcgccgtcgtcg 186 |||| ||||||||||||||||| ||||| Sbjct: 307 aaggccgacctcaccggcgccggcgtcg 334
>ref|XM_471581.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 315 ggacgacctcaccggcgccg 296
>ref|NM_190656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2139 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 ||||||||||||||||| |||||| Sbjct: 203 acatccagaagggcctcttcttcc 226
>ref|XM_368331.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00913.4) partial mRNA Length = 1737 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 catgtcgactgcgccggcca 217 |||||||||||||||||||| Sbjct: 1287 catgtcgactgcgccggcca 1306
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 cgtcgtcccgcccgacgccgacgcgccg 293 ||||| ||||||||||| |||||||||| Sbjct: 2041329 cgtcggcccgcccgacgacgacgcgccg 2041302
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and truncated rust resistance protein rp3-2t (rp3-2) gene, complete sequence Length = 276326 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catcctcgccctcgcccttc 71 |||||||||||||||||||| Sbjct: 260642 catcctcgccctcgcccttc 260661
>emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chromosome 9 Contains an aquaporin 7(AQP7) pseudogene, a novel gene, three novel pseudogenes, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast)(BMS1L) and a CpG island, complete sequence Length = 158462 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 ||||||||||| |||||||||||| Sbjct: 132367 cgccgccgaccgcctcgccgccgc 132390
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctcgccctcgcccttcaacg 75 |||||||||||||||||||| Sbjct: 2683819 ctcgccctcgcccttcaacg 2683800
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 266 cgtcgtcccgcccgacgccgacgcgccg 293 ||||| ||||||||||| |||||||||| Sbjct: 202868 cgtcggcccgcccgacgacgacgcgccg 202841
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||||||| ||||||||| Sbjct: 258181 cgccgccgaccaccgcgccgccgc 258204
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 116346 ggacgacctcaccggcgccg 116365
>dbj|AB232121.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete cds, isolate:OU1-76 Length = 2676 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 ccccctcatcctcgccctcgccct 69 |||| ||||||||||||||||||| Sbjct: 36 ccccgtcatcctcgccctcgccct 59
>gb|AC103740.2| Homo sapiens chromosome 15, clone RP11-1069G10, complete sequence Length = 182071 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tcctccaaagacatccagaa 25 |||||||||||||||||||| Sbjct: 28362 tcctccaaagacatccagaa 28343
>gb|DQ427830.1| Sorghum bicolor voucher PI585454 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427829.1| Sorghum bicolor voucher PI267539 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427828.1| Sorghum bicolor voucher PI267408 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427827.1| Sorghum bicolor voucher PI221607 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427826.1| Sorghum bicolor voucher PI152702 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427825.1| Sorghum bicolor voucher NSL92371 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427824.1| Sorghum bicolor voucher NSL87666 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427823.1| Sorghum bicolor voucher NSL77217 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427822.1| Sorghum bicolor voucher NSL77034 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427821.1| Sorghum bicolor voucher NSL56174 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427820.1| Sorghum bicolor voucher NSL56003 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427819.1| Sorghum bicolor voucher NSL55243 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427818.1| Sorghum bicolor voucher NSL51365 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427817.1| Sorghum bicolor voucher NSL51030 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427816.1| Sorghum bicolor voucher NSL50875 locus pHER1D05 genomic sequence Length = 588 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|DQ427815.1| Sorghum bicolor voucher BTx623 locus pHER1D05 genomic sequence Length = 588 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 81 cgccgccgacgacctcgccgccgc 58
>gb|AC068233.11| Homo sapiens chromosome 15, clone RP11-169M2, complete sequence Length = 177483 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tcctccaaagacatccagaa 25 |||||||||||||||||||| Sbjct: 129440 tcctccaaagacatccagaa 129421
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||| ||||||||||||||| Sbjct: 3710003 cgccgccgcccacctcgccgccgc 3710026
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 cgtcgtcccgcccgacgccgacgcgccg 293 ||||| ||||||||||| |||||||||| Sbjct: 2122057 cgtcggcccgcccgacgacgacgcgccg 2122084
>tpg|BK005053.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) WRKY transcription factor 51 (WRKY51) gene, complete cds Length = 1141 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 336 ggacgacctcaccggcgccg 317
>gb|AE004914.1| Pseudomonas aeruginosa PAO1, section 475 of 529 of the complete genome Length = 11650 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cgccgaccacctcgccgccg 96 |||||||||||||||||||| Sbjct: 5929 cgccgaccacctcgccgccg 5910
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccctcatcctcgccctcgcc 67 |||||||||||||||||||| Sbjct: 1498328 ccctcatcctcgccctcgcc 1498347
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 ||||||||||||||||| |||||| Sbjct: 4063 acatccagaagggcctcttcttcc 4086
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 ||||||||||||||||| |||||| Sbjct: 114800 acatccagaagggcctcttcttcc 114823
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgacgcgccgcgcgaac 300 |||||||||||||||||||| Sbjct: 3076476 cgccgacgcgccgcgcgaac 3076457
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 125420 cgccgccgacaacctcgccgccgc 125443
>gb|AE005088.1| Halobacterium sp. NRC-1 section 119 of 170 of the complete genome Length = 11020 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 acgccgccgaccacctcgccgccg 96 ||||||||||||||| |||||||| Sbjct: 8637 acgccgccgaccaccacgccgccg 8660
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 aaggacgacctcaccggcgccgtcgtcg 186 |||| ||||||||||||||||| ||||| Sbjct: 33494 aaggccgacctcaccggcgccggcgtcg 33521
>dbj|AK121494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000L17, full insert sequence Length = 1247 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 407 ggacgacctcaccggcgccg 388
>dbj|AK108771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H06, full insert sequence Length = 1403 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcgccgccgcactcgcccacgc 109 |||||||||||| ||||||||||| Sbjct: 81 cctcgccgccgccctcgcccacgc 104
>dbj|AK105221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-E09, full insert sequence Length = 490 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tcgccctcgcccttcaacgccgcc 80 ||||||||||||||| |||||||| Sbjct: 170 tcgccctcgcccttccacgccgcc 147
>dbj|AK100954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139N16, full insert sequence Length = 1248 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggacgacctcaccggcgccg 180 |||||||||||||||||||| Sbjct: 408 ggacgacctcaccggcgccg 389
>dbj|AK070440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050J22, full insert sequence Length = 2097 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 acatccagaagggcctcctcttcc 39 ||||||||||||||||| |||||| Sbjct: 338 acatccagaagggcctcttcttcc 361
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 209 cgccggccagggagtcgagctcgtccac 236 |||||||||||| |||||||||| |||| Sbjct: 481137 cgccggccagggcgtcgagctcgaccac 481164
>dbj|AK064868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I21, full insert sequence Length = 2901 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 aaggacgacctcaccggcgccgtcgtcg 186 |||| ||||||||||||||||| ||||| Sbjct: 307 aaggccgacctcaccggcgccggcgtcg 334
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgccgaccacctcgccgccg 96 |||||||||||||||||||| Sbjct: 4685982 cgccgaccacctcgccgccg 4686001 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gccgaccacctcgccgccgc 97 |||||||||||||||||||| Sbjct: 3932447 gccgaccacctcgccgccgc 3932466
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcgccgccgcactcgcccacgc 109 |||||||||||| ||||||||||| Sbjct: 65414 cctcgccgccgccctcgcccacgc 65391
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 catcctcgccctcgcccttc 71 |||||||||||||||||||| Sbjct: 412601 catcctcgccctcgcccttc 412582
>gb|U46014.1|SSU46014 Saccharum sp. polyphenol oxidase mRNA, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cgccgccgaccacctcgccgccgc 97 |||||||||| ||||||||||||| Sbjct: 1505 cgccgccgacgacctcgccgccgc 1482
>dbj|AP006676.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371a, complete sequence Length = 46189 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccactactaccccatcgccggccg 139 ||||||||||||| |||||||||| Sbjct: 10566 ccactactaccccttcgccggccg 10589 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,188,104 Number of Sequences: 3902068 Number of extensions: 2188104 Number of successful extensions: 56182 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52690 Number of HSP's gapped (non-prelim): 3483 length of query: 301 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 279 effective length of database: 17,147,199,772 effective search space: 4784068736388 effective search space used: 4784068736388 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
