ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast64e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase ... 32 0.91
2ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disint... 30 2.7
3SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) ... 29 4.5
4PPCK_CHLMU (Q9PLL6) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 29 4.5
5UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13) 29 4.5
6SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ... 29 4.5
7KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precu... 29 5.9
8TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase ... 29 5.9
9POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocaps... 28 7.7
10SPEA_YERPE (Q8ZHG8) Biosynthetic arginine decarboxylase (EC 4.1.... 28 7.7

>TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 815

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 396 PSGRTGRWRRKPWTPPRHPRP 334
           P    GRW R PW PP  P P
Sbjct: 4   PRSDVGRWGRSPWQPPTTPSP 24



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>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 441  CGAA*EAWAGETPSPPSGRTGRWRRKPWTP 352
            C A  E  A   P+ P GR  +WR   WTP
Sbjct: 1130 CLAIPEVGATSLPAIPLGRAAQWRHGSWTP 1159



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>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus)
           (Mammalian branch point-binding protein mBBP) (BBP)
           (CW17)
          Length = 653

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 417 AGETPSPPSGRTGRWRRKPWTPPRHPRPA 331
           +G+ P PPSG    W+++   PP  P P+
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514



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>PPCK_CHLMU (Q9PLL6) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 599

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 420 WAGETPSPPSGRTGRWRRKPWTPPRHP 340
           W G+T +PP G    W+ + WTP   P
Sbjct: 351 WEGKTATPPQGMID-WKGRNWTPGGEP 376



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>UN13B_HUMAN (O14795) Unc-13 homolog B (Munc13-2) (munc13)|
          Length = 1591

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 78  SFPSQYKTPFLPSSSIDRHTQPARNRHQQLLQETMRN 188
           SFP  Y T   P++S+ +   P R+  Q LLQ + R+
Sbjct: 198 SFPPPYHTASQPNASVHQFPVPVRSPQQLLLQGSSRD 234



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>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 417 AGETPSPPSGRTGRWRRKPWTPPRHPRPA 331
           +G+ P PPSG    W+++   PP  P P+
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514



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>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC|
           2.7.11.1)
          Length = 817

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -1

Query: 214 DSWGLLSMMFLMVSCRSCWCLLRAGCVCLSMEDDGRNGVLYCEGKLVS-RTHQTGQTR 44
           D WG      L VS R+C  +  + C C   +     G  Y +  L S RT+ T   R
Sbjct: 359 DFWGSDQQHLLSVSLRTCRDICISDCTCKGFQYQEGTGSCYPKAYLFSGRTYPTSDVR 416



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>TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 815

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 396 PSGRTGRWRRKPWTPPRHPRP 334
           P    GRW   PW PP  P P
Sbjct: 4   PRSDVGRWGGNPWQPPTTPSP 24



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>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 992

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -2

Query: 411 ETPSPPSGRTGRWRRKPWT---PPRHPR 337
           E P+PP  RTG W+RK W+   PP   R
Sbjct: 58  EGPAPP--RTGAWQRKDWSRAPPPPEER 83



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>SPEA_YERPE (Q8ZHG8) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)|
          Length = 659

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 10  LTVTHTLLFSSLLSVQFGGFCSPVSPHSTKPHS 108
           +T  HT+L S+++ V+   FC P  P +  P +
Sbjct: 366 VTAHHTVLVSNVIGVERNEFCEPQPPEAGAPRA 398


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,665,129
Number of Sequences: 219361
Number of extensions: 1158525
Number of successful extensions: 3874
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3872
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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