>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 107 SRPPQRPSGAPRQHKREGSGETI 39
           +RPP+ PS   ++H R GSGE +
Sbjct: 79  TRPPRPPSAQQQRHARRGSGEIV 101

>XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1)|
            (Strand-exchange protein 1 homolog) (Protein Dhm2)
          Length = 1719

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 25   QPSTSIVSPLPSLLCCRGAPDGR*GGRLH 111
            Q  T+IV P PS+  C  AP G  GG  H
Sbjct: 1183 QKLTAIVKPQPSVSHCSAAPSGHLGGLNH 1211

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 107 SRPPQRPSGAPRQHKREGSGETI 39
           +RPP+ PS   +Q  R GSGE +
Sbjct: 78  TRPPRPPSAQQQQQPRRGSGEIV 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,021,923
Number of Sequences: 219361
Number of extensions: 312818
Number of successful extensions: 1423
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)