ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64d07 |
|---|---|
| Clone Library Name | barley_pub |
>RL13A_PICMA (O65055) 60S ribosomal protein L13a| Length = 206 Score = 244 bits (624), Expect = 6e-65 Identities = 118/130 (90%), Positives = 125/130 (96%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQKMKYL Sbjct: 1 MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT RG AALA L+A+EGVPPPYDR Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRK 120 Query: 430 KRMVIPDALK 459 KRMVIPDALK Sbjct: 121 KRMVIPDALK 130
>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2| Length = 206 Score = 242 bits (618), Expect = 3e-64 Identities = 114/130 (87%), Positives = 123/130 (94%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+ Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EGVPPPYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120 Query: 430 KRMVIPDALK 459 KRMVIPDALK Sbjct: 121 KRMVIPDALK 130
>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4| Length = 206 Score = 242 bits (617), Expect = 4e-64 Identities = 114/130 (87%), Positives = 123/130 (94%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKY+ Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK YEGVP PYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120 Query: 430 KRMVIPDALK 459 KRMVIPDALK Sbjct: 121 KRMVIPDALK 130
>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3| Length = 206 Score = 239 bits (611), Expect = 2e-63 Identities = 113/130 (86%), Positives = 121/130 (93%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+CAKRVVVD RHHMLGRLAS AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+ Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG AALARLK +EG+PPPYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120 Query: 430 KRMVIPDALK 459 KRMVIPDALK Sbjct: 121 KRMVIPDALK 130
>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1| Length = 206 Score = 238 bits (607), Expect = 6e-63 Identities = 111/130 (85%), Positives = 122/130 (93%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKY+ Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT RG ALARLK +EGVP PYD+ Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120 Query: 430 KRMVIPDALK 459 KRMV+PDALK Sbjct: 121 KRMVVPDALK 130
>RL13A_LUPLU (O49885) 60S ribosomal protein L13a| Length = 205 Score = 228 bits (580), Expect = 8e-60 Identities = 110/130 (84%), Positives = 121/130 (93%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQKMKYL Sbjct: 1 MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 RFLRKRMNTKPSHGPIH AP+KI WRT+RGMIPHKT RGE ALARLK YEG+PPP+D+ Sbjct: 61 RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 119 Query: 430 KRMVIPDALK 459 KR+V+PDALK Sbjct: 120 KRLVVPDALK 129
>RL13A_CYAPA (P93099) 60S ribosomal protein L13a| Length = 200 Score = 180 bits (457), Expect = 1e-45 Identities = 88/121 (72%), Positives = 100/121 (82%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276 K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R K+K+ FL+KRMNT Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63 Query: 277 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 456 P GP HFR+PA+ILWRTIRGMIPHKT RG AAL RLKA+EGVPPPYD+ KRMVIP AL Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123 Query: 457 K 459 + Sbjct: 124 R 124
>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a| Length = 202 Score = 175 bits (444), Expect = 4e-44 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)| Length = 137 Score = 175 bits (443), Expect = 6e-44 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALK Sbjct: 63 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 121
>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a| Length = 202 Score = 175 bits (443), Expect = 6e-44 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a| Length = 202 Score = 175 bits (443), Expect = 6e-44 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)| Length = 202 Score = 175 bits (443), Expect = 6e-44 Identities = 80/119 (67%), Positives = 100/119 (84%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK ++G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 124
>RL13A_RAT (P35427) 60S ribosomal protein L13a| Length = 202 Score = 174 bits (441), Expect = 1e-43 Identities = 80/119 (67%), Positives = 99/119 (83%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALK 124
>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)| (Tum-P198 antigen) Length = 202 Score = 174 bits (440), Expect = 1e-43 Identities = 80/119 (67%), Positives = 99/119 (83%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT P Sbjct: 6 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 S GP HFRAP++I WRT+RGM+PHKT RG+AAL RLK +G+PPPYD+ KRMV+P ALK Sbjct: 66 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALK 124
>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A| Length = 204 Score = 170 bits (430), Expect = 2e-42 Identities = 75/126 (59%), Positives = 100/126 (79%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG R K+K++ FLR Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 61 Query: 262 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 441 KR N P+ GP HFRAP+KILW+T+RGMIPHKT RG++AL RL+AY+G PPPYD +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVV 121 Query: 442 IPDALK 459 +P AL+ Sbjct: 122 VPAALR 127
>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A| Length = 204 Score = 167 bits (422), Expect = 2e-41 Identities = 73/126 (57%), Positives = 99/126 (78%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261 +G K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG R K+K++ FLR Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLR 61 Query: 262 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 441 KR N P+ GP HFRAP+KILW+T+RGMIPHKT RG+ AL RL++Y+G PPPYD +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVV 121 Query: 442 IPDALK 459 +P AL+ Sbjct: 122 VPAALR 127
>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198| homolog) (Fragment) Length = 189 Score = 166 bits (419), Expect = 4e-41 Identities = 77/111 (69%), Positives = 92/111 (82%) Frame = +1 Query: 127 MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 306 +LGRLA+IVA E+L G +VVVVRCE I +SG R K+KYL FLRKRMNT PS GP HFR Sbjct: 1 LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60 Query: 307 APAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 AP++I WRT+RGM+PHKT RG+AAL RLK ++GVPPPYD+ KRMV+P ALK Sbjct: 61 APSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALK 111
>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A| Length = 205 Score = 159 bits (401), Expect = 4e-39 Identities = 70/126 (55%), Positives = 99/126 (78%) Frame = +1 Query: 82 SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261 +G+ + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG R K+K+L +LR Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61 Query: 262 KRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMV 441 KR N P+ GP HFRAP++I ++ +RGMIPHKT RG+AALARL+ ++G+P PYD+ +R+V Sbjct: 62 KRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVV 121 Query: 442 IPDALK 459 +P A++ Sbjct: 122 VPIAMR 127
>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B| Length = 197 Score = 158 bits (399), Expect = 7e-39 Identities = 73/121 (60%), Positives = 96/121 (79%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG R K+KYL +LRK Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 277 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 456 PS G HFRAP++I + +RGM+PHKTARG+AAL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125 Query: 457 K 459 + Sbjct: 126 R 126
>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A| Length = 197 Score = 158 bits (399), Expect = 7e-39 Identities = 73/121 (60%), Positives = 96/121 (79%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276 K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG R K+KYL +LRK Sbjct: 6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 277 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 456 PS G HFRAP++I + +RGM+PHKTARG+AAL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAAL 125 Query: 457 K 459 + Sbjct: 126 R 126
>RL16_NEUCR (Q9P720) 60S ribosomal protein L16| Length = 202 Score = 157 bits (398), Expect = 1e-38 Identities = 74/120 (61%), Positives = 95/120 (79%), Gaps = 1/120 (0%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG R K+KY +LRK P Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67 Query: 283 SHG-PIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 + G P HFRAP++I ++ +RGMIPHKTARG AAL RLK +EGVPPPYD+ K+MV+P AL+ Sbjct: 68 TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALR 127
>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a| Length = 202 Score = 154 bits (388), Expect = 1e-37 Identities = 70/126 (55%), Positives = 92/126 (73%) Frame = +1 Query: 85 GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 264 G+ + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG R K+KY+ FLRK Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61 Query: 265 RMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVI 444 R N P+ G H+RAP KI WRT+RGM+PHKT RG AL L+AYEGVP Y +TK + Sbjct: 62 RCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHA 121 Query: 445 PDALKF 462 P A +F Sbjct: 122 PSASRF 127
>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)| Length = 198 Score = 153 bits (386), Expect = 2e-37 Identities = 69/119 (57%), Positives = 94/119 (78%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG R K+KY FLRK Sbjct: 6 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 + GP HFRAP++I ++ +RGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+ Sbjct: 66 TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALR 124
>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)| Length = 197 Score = 152 bits (385), Expect = 3e-37 Identities = 70/119 (58%), Positives = 94/119 (78%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG R K+KY FLRK Sbjct: 5 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDALK 459 + GP HFRAP++IL++ IRGM+ HKTARG+AAL RLK +EG+PPPYD+ KR+V+P AL+ Sbjct: 65 TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALR 123
>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C| Length = 197 Score = 151 bits (381), Expect = 9e-37 Identities = 69/121 (57%), Positives = 92/121 (76%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276 K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG R K+KYL +LRK Sbjct: 6 KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65 Query: 277 KPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 456 PS G HFRAP++I + +RGM+PHKT RG AL L+A EG+PPP+D+ KR+V+P AL Sbjct: 66 NPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAAL 125 Query: 457 K 459 + Sbjct: 126 R 126
>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal| protein L13P; 30S ribosomal protein S9P] Length = 282 Score = 84.7 bits (208), Expect = 1e-16 Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 ++++ H+LGRLAS+V+K+LL G+ V+V+ E+I ++G KY + + + + P Sbjct: 4 MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63 Query: 283 SH-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 453 GP + R P I RT+RGM+P+K ++G A LKAY G+P + + + IPDA Sbjct: 64 RRMGPKYPRRPDDIFRRTVRGMLPYKKSKGREAFKGLKAYVGIPREFKDEEMVEIPDA 121
>RL13_ARCFU (O29137) 50S ribosomal protein L13P| Length = 156 Score = 84.0 bits (206), Expect = 2e-16 Identities = 48/117 (41%), Positives = 68/117 (58%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285 V+DA H+LGRL+S +AK LLNG+R+VVV E+ ++G + M + R+ K Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74 Query: 286 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDAL 456 GP R P +I RT+RGM+P K++RG A RL+ + GVP + I DAL Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGREFEKIEDAL 131
>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P| Length = 142 Score = 79.0 bits (193), Expect = 6e-15 Identities = 46/116 (39%), Positives = 65/116 (56%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285 +++A +LGRLAS VAK LL G+ VV+V E+ ++G KY + R T P Sbjct: 3 IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62 Query: 286 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 453 GP + + +I+ RTIRGM+P KT RG A RLK Y G+P + + I +A Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFKRLKVYVGIPKEFKDKQLETIVEA 118
>RL13_PYRHO (O59300) 50S ribosomal protein L13P| Length = 142 Score = 78.6 bits (192), Expect = 7e-15 Identities = 46/116 (39%), Positives = 65/116 (56%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285 +++A +LGRLAS VAK LL G+ VV+V E+ ++G KY + R T P Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62 Query: 286 HGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 453 GP + + +I+ RTIRGM+P KT RG A RLK Y G+P + + I +A Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEA 118
>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P| Length = 155 Score = 72.8 bits (177), Expect = 4e-13 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 2/122 (1%) Frame = +1 Query: 94 AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMN 273 A+ +VVD ++GRLAS+VAK LL G RV VV E+I +SG R ++ R + Sbjct: 8 AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD-PRMVVESYRTTVLGVK 66 Query: 274 TKPSH--GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIP 447 + SH P R P ++ +RGM+P ARG ALARL+ Y GVP + + P Sbjct: 67 SHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFP 126 Query: 448 DA 453 +A Sbjct: 127 EA 128
>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)| Length = 145 Score = 68.2 bits (165), Expect = 1e-11 Identities = 42/107 (39%), Positives = 61/107 (57%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 V+VDAR ++GR+AS VA++ L+G+ V VV E ++G + KY KR++ Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKY----EKRVDIGN 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 423 +G + + P I RTIRGM+PHK RG A ++ Y G PYD Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYD 110
>RL13_METJA (P54023) 50S ribosomal protein L13P| Length = 137 Score = 66.6 bits (161), Expect = 3e-11 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 1/103 (0%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285 V+DA +LGRLAS VAK +L G+ +V+V E + ++G Y K+ P Sbjct: 3 VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITGNKDWIIKTYQEEREKKNVANPR 62 Query: 286 H-GPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVP 411 GP R P IL RTIR M+P+K +G A R+K Y G P Sbjct: 63 RFGPKFPRRPDDILRRTIRKMLPYKKPKGREAFKRVKVYVGNP 105
>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P| Length = 145 Score = 64.3 bits (155), Expect = 1e-10 Identities = 41/107 (38%), Positives = 55/107 (51%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 VVVDAR ++GR+AS VA+ L G RV VV E+ ++G + R R N Sbjct: 10 VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65 Query: 283 SHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 423 GP + + P I R IRGM+P+K G AL ++ Y G P D Sbjct: 66 DRGPYYPKRPDGIFKRAIRGMLPYKQDDGREALDSVRVYVGNPMDED 112
>RL13_SULSO (P95991) 50S ribosomal protein L13P| Length = 149 Score = 63.9 bits (154), Expect = 2e-10 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282 V+++A +LGR+AS V + L G++V++V E+ +SG R Y L + P Sbjct: 10 VIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNP 69 Query: 283 SHGPIHF-RAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 453 I R+P I+ RTIRGM+P K+++G L +K Y GVP ++ + + PD+ Sbjct: 70 YRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDS 126
>RL13_SULAC (P39473) 50S ribosomal protein L13P| Length = 148 Score = 63.2 bits (152), Expect = 3e-10 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKY-LRFLRKRMNTK 279 V+VDA + +LGR+++ +AK L +G++V VV E+ +SG R Y L F K M Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67 Query: 280 PSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRTKRMVIPDA 453 G R P I+ RT+RGM+P K G+ LKAY G+P + + DA Sbjct: 68 YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELEGKSMIRFDDA 124
>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13| Length = 149 Score = 48.1 bits (113), Expect = 1e-05 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 20/141 (14%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M+ V K VVDA +LGRLA+ +AK L+ G V+VV +++ + Sbjct: 12 MIKPEEVERKWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVL 71 Query: 214 SGGLVRQKMKY--------LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARG 369 +G + QK+ Y L+ L R + + P +++W ++ M+P K +G Sbjct: 72 TGKKLDQKVYYWHSGYPGGLKSLTARQMLE--------KHPERLIWLAVKRMLP-KNRKG 122 Query: 370 EAALARLKAYEGVPPPYDRTK 432 L RLK Y P+ K Sbjct: 123 RKMLKRLKVYASPEHPHQAQK 143
>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)| Length = 250 Score = 44.7 bits (104), Expect = 1e-04 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 12/129 (9%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQKM 240 K VVDA +LGR+AS +A K L + G V+VV +++ +SG QK+ Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172 Query: 241 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 R + + + R P +I+ +RGM+P K G LK Y+G P+ Sbjct: 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP-KGRLGRYLFNHLKVYKGAEHPH 231 Query: 421 DRTKRMVIP 447 + + +P Sbjct: 232 QAQQPIDLP 240
>RL13_STRCO (Q53874) 50S ribosomal protein L13| Length = 147 Score = 44.3 bits (103), Expect = 2e-04 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%) Frame = +1 Query: 106 VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249 V+DA+ +LGRLA+ I A + G V+++ +++ +SG QKM Y Sbjct: 17 VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAYR 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 + + + P K + + I+GM+P K + G L++LK Y+G P+ Sbjct: 77 HSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLP-KNSLGRQMLSKLKVYKGDQHPH 132
>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13| Length = 145 Score = 44.3 bits (103), Expect = 2e-04 Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G R KM Y S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKERDKMYYRHSNHPGGIKSISAGELKANNPERLLENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13| Length = 174 Score = 44.3 bits (103), Expect = 2e-04 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 14/128 (10%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQKMKY 246 VVVDA LGRLA+++A ++ G VVV+ ++ ++G + K+ Y Sbjct: 42 VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100 Query: 247 LRF--LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 R+ + + T+ + + + P +++ + GM+P K +G A RLK Y G P+ Sbjct: 101 TRYTGYQGGLKTETAREALS-KHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHPH 158 Query: 421 DRTKRMVI 444 K V+ Sbjct: 159 SAQKPQVL 166
>RL13_SYNY3 (P73294) 50S ribosomal protein L13| Length = 151 Score = 43.1 bits (100), Expect = 3e-04 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKM 240 K V+DA LGRLA+ VA L G V+++ E+I ++G QK+ Sbjct: 15 KWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKREQKL 74 Query: 241 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 R + + + R P +I+ +RGM+P K + G +LK Y G P+ Sbjct: 75 YRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLP-KNSLGRKLFTKLKVYAGPSHPH 133
>RL13_BACSU (P70974) 50S ribosomal protein L13| Length = 145 Score = 42.7 bits (99), Expect = 4e-04 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 14/135 (10%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K +VVDA LGRL+S VA L G V+++ E+I + Sbjct: 6 MANASTIERKCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIEL 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRA--PAKILWRTIRGMIPHKTARGEAALAR 387 +G + K+ Y R + K S + R P K+L I+GM+P K + G + Sbjct: 66 TGKKLTDKI-YYRHTQHPGGLK-SRTALEMRTNYPEKMLELAIKGMLP-KGSLGRQMFKK 122 Query: 388 LKAYEGVPPPYDRTK 432 L Y G P++ K Sbjct: 123 LNVYRGSEHPHEAQK 137
>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13| Length = 145 Score = 41.2 bits (95), Expect = 0.001 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+++ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G + KM Y S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKEQDKMYYRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_MYCLE (P38014) 50S ribosomal protein L13| Length = 147 Score = 41.2 bits (95), Expect = 0.001 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 V+DA +LGRLA++ A L G V+V+ +++ +SG V+ KM Y Sbjct: 17 VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYR 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 429 K + G + + P +++ + I GM+P K +L+ Y G P + + Sbjct: 77 HSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLP-KNKLSRQIQRKLRVYAG--PDHPHS 133 Query: 430 KRMVIPDALK 459 + +P +K Sbjct: 134 AQQPVPFEIK 143
>RK13_GUITH (O46915) Chloroplast 50S ribosomal protein L13| Length = 143 Score = 39.3 bits (90), Expect = 0.005 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%) Frame = +1 Query: 97 KRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM 240 K ++DA LGRLAS AK L+ +V++ ++I ++G K Sbjct: 15 KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74 Query: 241 KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 Y + T + + R P +IL + ++G++P K G LK Y G P+ Sbjct: 75 YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHPH 133 Query: 421 D 423 + Sbjct: 134 E 134
>RL13_STAES (Q8CRI9) 50S ribosomal protein L13| Length = 145 Score = 39.3 bits (90), Expect = 0.005 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+++ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G + KM + S G + P ++L +I+GM+P T GE +L Sbjct: 66 TGNKEQDKMYHRHSNHPGGLKSISAGELKRTNPERLLETSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RM23_YEAST (Q12487) 60S ribosomal protein L23, mitochondrial precursor (YmL23)| Length = 163 Score = 38.9 bits (89), Expect = 0.006 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%) Frame = +1 Query: 130 LGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLRFLRK-RM 270 LGRLAS +A L+ G VVV C++I ++G QK + R ++ Sbjct: 28 LGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQL 87 Query: 271 NTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT------K 432 + + + + +IL + + GM+P R + L RLK ++G PY + + Sbjct: 88 KLQTMNKVVADKGFGEILKKAVSGMLPKNKLR-KQRLDRLKVFDGSENPYKQNITAFAHE 146 Query: 433 RMVIPDALK 459 + IP+ LK Sbjct: 147 QSSIPEPLK 155
>RL13_AQUAE (O67722) 50S ribosomal protein L13| Length = 144 Score = 38.9 bits (89), Expect = 0.006 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 22/131 (16%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLAS +AK L G V+V+ E+I ++G + QK Y Sbjct: 17 VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYYW 76 Query: 250 ----------RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 399 R L+ + KP +++ ++ M+P K G L +LK Y Sbjct: 77 HSRYPGGLKERTLKWMLENKPE----------EVIRLAVKRMLP-KNRLGHRMLKKLKVY 125 Query: 400 EGVPPPYDRTK 432 G P+ K Sbjct: 126 RGPEHPHQAQK 136
>RL13_STAAW (Q7A089) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAS (Q6G7A3) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAR (Q6GEL7) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAN (Q7A473) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAM (Q99S51) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_STAAC (Q5HDZ0) 50S ribosomal protein L13| Length = 145 Score = 38.5 bits (88), Expect = 0.008 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+V+ +I Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEF 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P +++ +I+GM+P T GE +L Sbjct: 66 TGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLP-STRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_CHLTR (O84127) 50S ribosomal protein L13| Length = 150 Score = 38.1 bits (87), Expect = 0.011 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 13/113 (11%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 246 VV+A LGRL+S VAK L G V+V+ E++ ++G QK+ Y Sbjct: 24 VVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83 Query: 247 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 M P I R PA ++ ++GM+P KT G + L+ +G Sbjct: 84 YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVLKG 134
>RL13_STACA (Q00990) 50S ribosomal protein L13| Length = 145 Score = 38.1 bits (87), Expect = 0.011 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L +G V+++ +I M Sbjct: 6 MANESNIERKWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEM 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + + P ++L +I+GM+P + GE +L Sbjct: 66 TGKKASDKVYYRHSNYPGGIKSITAGELREKNPERLLEISIKGMLP-SSRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_CHLMU (Q9PKR3) 50S ribosomal protein L13| Length = 150 Score = 37.7 bits (86), Expect = 0.014 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 13/113 (11%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKM-KY 246 V++A LGRL+S VAK L G V+V+ E++ ++G QK+ Y Sbjct: 24 VINAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQKVYHY 83 Query: 247 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 M P I R PA ++ ++GM+P KT G + L+ +G Sbjct: 84 YTGFISGMREVPFENMI-ARKPAYVIEHAVKGMLP-KTKLGRRQMKSLRVVKG 134
>RL13_THET8 (P60488) 50S ribosomal protein L13| Length = 140 Score = 37.7 bits (86), Expect = 0.014 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 23/129 (17%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKY 246 V++DA LGRLA+ +A L G VVVV ++I ++G + QK+ Y Sbjct: 14 VLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKI-Y 72 Query: 247 LRF-----------LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 R+ L K + T P ++L ++GM+P K G RLK Sbjct: 73 TRYSGYPGGLKKIPLEKMLATHPE----------RVLEHAVKGMLP-KGPLGRRLFKRLK 121 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 122 VYAGPDHPH 130
>RL13_STAHJ (Q4L881) 50S ribosomal protein L13| Length = 145 Score = 37.0 bits (84), Expect = 0.025 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213 M + S + K V+DA LGRL+S VA L G V+++ +I + Sbjct: 6 MANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIIINAAKIEL 65 Query: 214 SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLK 393 +G K+ Y + G + P ++L +I+GM+P + GE +L Sbjct: 66 TGKKESDKIYYRHSNHPGGIKSVTAGELKRNNPERLLETSIKGMLP-SSRLGEKQGKKLF 124 Query: 394 AYEGVPPPY 420 Y G P+ Sbjct: 125 VYGGAEHPH 133
>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)| Length = 154 Score = 37.0 bits (84), Expect = 0.025 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%) Frame = +1 Query: 88 VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 231 V K V++DA ++GRLA++VA L G V+++ ++ ++G Sbjct: 11 VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70 Query: 232 QKMKYLRF-LRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGV 408 K+ Y + + + + R P +++ + I MIP + G + L+ Y G Sbjct: 71 NKVYYHHTGFIGGIKERSAKAILEGRFPERVVEKAIERMIP-RGPLGRVQMGNLRVYPGA 129 Query: 409 PPPYD 423 P++ Sbjct: 130 EHPHE 134
>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13| Length = 149 Score = 37.0 bits (84), Expect = 0.025 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%) Frame = +1 Query: 70 MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICM 213 +V S VVDA LGRL+S VAK L G V+V+ E++ + Sbjct: 11 IVKSSETTKSWYVVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRL 70 Query: 214 SGGLVRQKM-KYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARL 390 +G QK+ +Y M P + R P I+ I+GM+P +T G+ L L Sbjct: 71 TGAKKGQKIYRYYTGYISGMREIPFEN-MMARKPNYIIEHAIKGMMP-RTRLGKKQLKSL 128 Query: 391 KAYEG 405 + +G Sbjct: 129 RIVKG 133
>RL13_TREPA (O83988) 50S ribosomal protein L13| Length = 142 Score = 36.6 bits (83), Expect = 0.032 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYL 249 ++DA LGR+A+ VA L G VVV+ E++ +SG + KM Y Sbjct: 17 LIDAAGRPLGRVAARVACLLRGKHKASYTPNQEMGDYVVVINAEKVFLSGTKPKDKMYYR 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYD 423 S + R P + L ++GM+P K G + +K Y G P++ Sbjct: 77 HSGYPGGLKSVSFSALVKRRPVEPLRHAVKGMLP-KGPLGRKLIKNVKIYAGSVHPHE 133
>RL13_HELPY (P56038) 50S ribosomal protein L13| Length = 141 Score = 36.6 bits (83), Expect = 0.032 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Frame = +1 Query: 103 VVVDARHHMLGRLASIVAKELLNGQR------------VVVVRCEEICMSGGLVRQKMKY 246 VV+DA+ + GRL + +A L R VVV+ ++ SG + K + Sbjct: 15 VVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYF 74 Query: 247 LRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPY 420 + + +AP K+ +RGM+P KT G+A + +LK Y P+ Sbjct: 75 THSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPH 131
>RL13_SHIFL (P0AA15) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_SALTY (P0AA13) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_SALTI (P0AA14) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECOLI (P0AA10) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECOL6 (P0AA11) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_ECO57 (P0AA12) 50S ribosomal protein L13| Length = 142 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYH 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P +++ ++GM+P K G A +LK Y G Sbjct: 77 HTGHIGGIKQATFEEMIARRPERVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>RL13_HAEIN (P44387) 50S ribosomal protein L13| Length = 142 Score = 35.4 bits (80), Expect = 0.072 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Frame = +1 Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYL 249 VVDA LGRLA+ +A+ L G ++V+ +++ ++G K+ Y Sbjct: 17 VVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYW 76 Query: 250 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEG 405 + + + R P ++ ++GM+P K G A +LK Y G Sbjct: 77 HTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLP-KGPLGRAMFRKLKVYAG 127
>IRX4_CHICK (Q9YGS0) Iroquois-class homeodomain protein IRX-4 (Iroquois| homeobox protein 4) Length = 485 Score = 33.5 bits (75), Expect = 0.27 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = +3 Query: 285 PRPHPLPRPGQDPLAHHPRYDSAQDRE----GRGRACQAQGVRGCAAAV 419 P PHPLP G P A P +A++ E R R C C AA+ Sbjct: 279 PHPHPLPGGGPPPRAAEPPAAAAEEEEEEAAERARGCLKPAAEECEAAL 327
>RL13_BUCBP (Q89AE6) 50S ribosomal protein L13| Length = 144 Score = 31.6 bits (70), Expect = 1.0 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 12/109 (11%) Frame = +1 Query: 109 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 252 +DA +LGRLA+ +A L G ++V+ + I ++G K Y Sbjct: 20 IDATGKILGRLATNIASRLRGKHKVEYTPHVDIGDYLIVINAKNIKVTGKKCTDKFYYHH 79 Query: 253 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 399 K + + R P +I+ +RGM+P K G + +LK Y Sbjct: 80 TGYVGGLKKIAFKDMLHRYPERIIEIAVRGMLP-KGPLGRSMFKKLKVY 127
>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion| 2 protein) Length = 314 Score = 30.4 bits (67), Expect = 2.3 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +3 Query: 3 IPPPPPELQTLVAAPPP 53 +PPPPP Q+L A+PPP Sbjct: 269 LPPPPPLPQSLTASPPP 285
>IF2_METCA (Q609C0) Translation initiation factor IF-2| Length = 868 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +3 Query: 282 IPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRACQAQGVRGCAAAVRQDQ 431 IPRP P PRP P A P+ ++ + R +A+G + A R+D+ Sbjct: 195 IPRPAPEPRPPARPSAGKPKAEAPRAHPAE-RETEARGDKRSAGLSRKDE 243
>RL13_BUCAP (Q8K9F9) 50S ribosomal protein L13| Length = 142 Score = 30.0 bits (66), Expect = 3.0 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 12/109 (11%) Frame = +1 Query: 109 VDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKYLR 252 VDA + +LGR AS ++ L G ++V+ +I ++G K+ Y Sbjct: 18 VDATNKILGRFASAISIRLRGKHKIEYTPHLDTGDYIIVLNASKILVTGQKKINKVYYHH 77 Query: 253 FLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAY 399 + I + PAK++ ++GM+P K + G + +LK + Sbjct: 78 TGYIGGIKQLRFEEIMLKNPAKVIEIAVKGMLP-KGSLGRSMFKKLKVF 125
>CAPU_DROME (Q24120) Protein cappuccino| Length = 1059 Score = 30.0 bits (66), Expect = 3.0 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP L VA PPP Sbjct: 488 PPPPPPLHAFVAPPPP 503
>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 367 Score = 29.3 bits (64), Expect = 5.1 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +3 Query: 6 PPPPPELQTLVAAPPP 53 PPPPP L AAPPP Sbjct: 52 PPPPPPLPLAAAAPPP 67
>VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymerase accessory| protein) (PAP) (ICP36 protein) Length = 433 Score = 29.3 bits (64), Expect = 5.1 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -1 Query: 52 GGGAATRVWSSGGGGG 5 GGG+ TR SSGGGGG Sbjct: 345 GGGSGTRKMSSGGGGG 360
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 28.9 bits (63), Expect = 6.7 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +3 Query: 273 HQAIPRPHPLPRPGQDPLAHHPRYDSA 353 H P P P P P Q P HHP A Sbjct: 330 HAPPPAPPPPPAPAQHPHQHHPHLPGA 356
>PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor delta| (PPAR-delta) (PPAR-beta) (Nuclear hormone receptor 1) (NUC1) Length = 440 Score = 28.9 bits (63), Expect = 6.7 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = +1 Query: 193 RCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHF-RAPAKILWRTIRGMIPHKTARG 369 +C+ IC R K +Y RF +K + SH I F R P + + G+ + + Sbjct: 109 KCDRICKIQKKNRNKCQYCRF-QKCLALGMSHNAIRFGRMPEAEKRKLVAGLTASEGCQH 167 Query: 370 EAALARLKAY 399 LA LKA+ Sbjct: 168 NPQLADLKAF 177
>PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 424 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 224 RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTT 105 +PP+ ++S TTTT +SSS + I P+ W +TT Sbjct: 371 KPPETTLNSTTTTTTTTKVSSSTSKIPF-TPAPWANTTTT 409
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.9 bits (63), Expect = 6.7 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = -3 Query: 227 TRPPDMQISSQRTTTTRCPLSSSLATID-ARRPSMWWRASTTTRLAHTPEPDTISPLT 57 T PP S TTTT P + + T PS +TT TP P T +P+T Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = -3 Query: 227 TRPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHTPEPDTISPLT 57 T PP S TT P +S+ PS +TT TP P T +P+T Sbjct: 1492 TTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1548
>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD| protein) Length = 3119 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 276 QAIPRPHPLPRPGQDPLAHHPRYDSAQDREGRGRAC 383 Q P P PLP P ++PL H P+ + + ++ R C Sbjct: 48 QPPPPPPPLPGPAEEPL-HRPKKELSATKKDRVNHC 82
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 273 HQAIPRPHPLPRPGQDPLAHHP 338 HQ +P HP P Q P AHHP Sbjct: 281 HQTLPPHHPYPHQHQHP-AHHP 301
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 285 PRPHPLPRPGQDPLAHHP 338 P PHP PRP Q P A P Sbjct: 335 PHPHPHPRPPQPPAAQAP 352
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 Query: 3 IPPPPPELQTLVAAPPP 53 IPPPPP L V PPP Sbjct: 683 IPPPPPPLPGSVGVPPP 699
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 273 HQAIPRPHPLPRPGQDPLAHHP 338 HQ +P HP P Q P AHHP Sbjct: 126 HQTLPPHHPYPHQHQHP-AHHP 146
>RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)| Length = 15 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +1 Query: 73 VSGSGVCAKRVVVDA 117 VSGSG+ AKRVVVDA Sbjct: 1 VSGSGIMAKRVVVDA 15
>ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming sequence 2| oncogene) Length = 738 Score = 28.5 bits (62), Expect = 8.7 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Frame = -3 Query: 260 RRKRRYFIFWRT--RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHT 87 ++ R F F +T R M +SS ++ R P SS + R S+T+ LA Sbjct: 660 KKVTRAFSFSKTPKRALRMALSSSHSSEGRSPPSSGKLAVS--------RLSSTSSLAGI 711 Query: 86 PEPDTISPLTWRRRRSY 36 P P +S ++ RRS+ Sbjct: 712 PSPSLVSLPSFFERRSH 728 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,293,094 Number of Sequences: 219361 Number of extensions: 1078880 Number of successful extensions: 6102 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 4548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5928 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
