ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast64d02 |
|---|---|
| Clone Library Name | barley_pub |
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = -3 Query: 312 PPESNIHKLDEXXXXXXXXXXXGDDALAAAGQEESVTHLAERLAAVGVDRRLRTAPPPA 136 P ESN H + + AA + E+ + ERLAA+G+ R + P PA Sbjct: 1203 PIESNTHTPEVKATSESPSASSNLEDRAARIKAEAQRRMNERLAALGIKPRQKGTPSPA 1261
>ENTD_SALTY (Q56064) 4'-phosphopantetheinyl transferase entD (EC 2.7.8.-)| (Enterobactin synthetase component D) (Enterochelin synthase D) Length = 234 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -3 Query: 240 DALAAAGQEESVTHLAERLAAVGVDRRLRTAPPPAAGGKHE 118 D L +AG++ HLA R+AAV R + P G K + Sbjct: 37 DRLRSAGRKRKAEHLAGRIAAVHALREVGVRTVPGMGDKRQ 77
>ENTD_SALTI (Q8Z8L9) 4'-phosphopantetheinyl transferase entD (EC 2.7.8.-)| (Enterobactin synthetase component D) (Enterochelin synthase D) Length = 234 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -3 Query: 240 DALAAAGQEESVTHLAERLAAVGVDRRLRTAPPPAAGGKHE 118 D L +AG++ HLA R+AAV R + P G K + Sbjct: 37 DRLRSAGRKRKAEHLAGRIAAVHALREVGVRAVPGIGDKRQ 77
>FIBB_MOUSE (Q8K0E8) Fibrinogen beta chain precursor [Contains: Fibrinopeptide| B] Length = 481 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 6/32 (18%) Frame = -3 Query: 171 VDRR------LRTAPPPAAGGKHEGRQERAEA 94 VDRR LR APPP +GG + R +A A Sbjct: 39 VDRRKEEPPSLRPAPPPISGGGYRARPAKATA 70
>LX15B_MOUSE (O35936) Arachidonate 15-lipoxygenase type II (EC 1.13.11.33)| (15-LOX-2) (8S-lipoxygenase) (8S-LOX) Length = 677 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 314 FLQKVTFTNLMKEEAGAARSAPSAT-MPSLPPDRRKALPTSRNDSRP 177 ++ V FT K A ++ S MP+LPP + PTS+ +RP Sbjct: 542 YITMVIFTCSAKHAAVSSGQFDSCVWMPNLPPTMQLPPPTSKGQARP 588
>TGT_STRA5 (Q8E1F9) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 380 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 157 EASIHTYGRESFREVGNAFLLSGGSEGIVADGADLAAPASSFIKFVN 297 +A++ T E +E+G+ +LS + G +L A A KF+N Sbjct: 42 QATVKTQSPEELKEMGSGIILSNTYHLWLRPGDELIAKAGGLHKFMN 88
>TGT_STRA3 (Q8E6X6) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 380 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 157 EASIHTYGRESFREVGNAFLLSGGSEGIVADGADLAAPASSFIKFVN 297 +A++ T E +E+G+ +LS + G +L A A KF+N Sbjct: 42 QATVKTQSPEELKEMGSGIILSNTYHLWLRPGDELIAKAGGLHKFMN 88
>PUR2_LEPIN (Q8EZT7) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)| (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 426 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = +1 Query: 163 SIHTYGRESFREVGNAFLLSGGSEGIVADGADLAA---PASSFIKFVNV--TFWR 312 ++H + + ++ G F G GIVA GADL + A SF++ + TF+R Sbjct: 364 NVHLFHAGTLKKDGKVFSSGGRILGIVAQGADLKSSVDQAYSFLEKIQAPKTFYR 418
>PUR2_LEPIC (Q72V31) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)| (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 426 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = +1 Query: 163 SIHTYGRESFREVGNAFLLSGGSEGIVADGADLAA---PASSFIKFVNV--TFWR 312 ++H + + ++ G F G GIVA GADL + A SF++ + TF+R Sbjct: 364 NVHLFHAGTLKKDGKVFSSGGRILGIVAQGADLKSSVDQAYSFLEKIQAPKTFYR 418
>RL12_HALVO (P41197) 50S ribosomal protein L12P ('A' type)|
Length = 113
Score = 27.7 bits (60), Expect = 7.5
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -3
Query: 234 LAAAG---QEESVTHLAERLAAVGVDRRLRTA---PPPAAGGKHEGRQERAE 97
L AAG +E V L L V ++ + TA P PAAGG G E A+
Sbjct: 26 LEAAGVDVEESRVKALVAALEDVDIEEAIETAAAAPAPAAGGSAGGEVEAAD 77
>ENTD_SALAS (Q53636) 4'-phosphopantetheinyl transferase entD (EC 2.7.8.-)| (Enterobactin synthetase component D) (Enterochelin synthase D) Length = 232 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 240 DALAAAGQEESVTHLAERLAAVGVDRRLRTAPP 142 D L +AG++ HLA R+AAV RR + P Sbjct: 37 DRLRSAGRKRKAEHLAGRIAAVHALRRWASGVP 69
>TGT_STRR6 (P66908) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 380 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 157 EASIHTYGRESFREVGNAFLLSGGSEGIVADGADLAAPASSFIKFVN 297 +A++ T E +E+G+ +LS + G +L A A KF+N Sbjct: 42 QATVKTQSPEELKEMGSGIILSNTYHLWLRPGDELIARAGGLHKFMN 88
>TGT_STRPN (P66907) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 380 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 157 EASIHTYGRESFREVGNAFLLSGGSEGIVADGADLAAPASSFIKFVN 297 +A++ T E +E+G+ +LS + G +L A A KF+N Sbjct: 42 QATVKTQSPEELKEMGSGIILSNTYHLWLRPGDELIARAGGLHKFMN 88
>IKBL_RAT (Q8R2H1) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa| B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1) Length = 381 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -3 Query: 243 DDALAAAGQEESVTHLAERLAAVGVDRRLRTA--------PPPAAGGKHEGRQERAEAK 91 DDA + ES + +ERLA ++ R PP A G H RQ+ E + Sbjct: 186 DDASRETQEPESFSAWSERLAREHAQKQRRQQLEAEGSRRPPRAEGSSHSWRQQEEEQR 244
>FIBB_RAT (P14480) Fibrinogen beta chain precursor [Contains: Fibrinopeptide| B] Length = 479 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%) Frame = -3 Query: 171 VDRR------LRTAPPPAAGGKHEGRQERAEA 94 VDRR LR APPP +GG + R + +A Sbjct: 37 VDRRKEEPPSLRPAPPPISGGGYRARPAKVDA 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,493,371 Number of Sequences: 219361 Number of extensions: 383854 Number of successful extensions: 2041 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2038 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)