ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast64d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 8e-48
2gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome... 178 7e-42
3gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome... 178 7e-42
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 178 7e-42
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 178 7e-42
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 100 5e-18
8emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa... 100 5e-18
9gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F... 48 0.017
10gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 ... 48 0.017
11gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 46 0.069
12ref|NM_078841.3| Drosophila melanogaster spellchecker1 CG4215-RA... 44 0.27
13ref|NM_001014482.1| Drosophila melanogaster spellchecker1 CG4215... 44 0.27
14gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, r... 44 0.27
15gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 44 0.27
16gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 44 0.27
17gb|U17893.1|DMU17893 Drosophila melanogaster Spellchecker1 (spel... 44 0.27
18ref|XM_550602.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
19gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 42 1.1
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
21dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
22gb|AF502559.1| Synthetic construct major pollen allergen Artv1 m... 42 1.1
23gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.3
24ref|XM_466427.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
25ref|NM_191944.1| Oryza sativa (japonica cultivar-group), predic... 40 4.3
26gb|AC103896.3| Papio anubis clone RP41-441D23, complete sequence 40 4.3
27gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
28gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
29gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 4.3
30gb|AC129608.3| Mus musculus BAC clone RP23-193A2 from chromosome... 40 4.3
31gb|AC036146.10| Mus musculus chromosome 5, clone RP23-294A15, co... 40 4.3
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.3
33gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 40 4.3
34gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom... 40 4.3
35gb|AC161529.4| Mus musculus chromosome 5, clone RP24-316L21, com... 40 4.3
36emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K... 40 4.3
37gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 40 4.3
38emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.3
39gb|AC113337.2| Genomic sequence for Oryza sativa (japonica culti... 40 4.3
40gb|DQ397623.1| Cenarchaeum symbiosum clone C15D07, complete sequ... 40 4.3
41gb|AE009774.1|AE009774 Pyrobaculum aerophilum strain IM2 section... 40 4.3
42gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.3
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
45dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
48dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
49dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
50gb|AE004895.1| Pseudomonas aeruginosa PAO1, section 456 of 529 o... 40 4.3
51gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genom... 40 4.3
52dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
53dbj|AP004145.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
54dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.3
55dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
56emb|X84724.1|AAVFAV1CE Fowl adenovirus 1 two fibers, protein pVI... 40 4.3
57dbj|AK103811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
58gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome 40 4.3
59gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.3
60gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
61gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) ge... 40 4.3 
>dbj|AK068611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157H23, full
           insert sequence
          Length = 2166

 Score =  198 bits (100), Expect = 8e-48
 Identities = 142/156 (91%)
 Strand = Plus / Plus

                                                                       
Query: 156 ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
           ||||||||||||||||||||||| | | ||| ||||||| |||||||| ||||| |||||
Sbjct: 333 ggaggcgtcgatccacacctacgacagggagccgttccgggaggtggggaacgcgttcct 392

                                                                       
Query: 216 cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
           ||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 393 cctctccgggggcagcgagggcgtcgtcgccgacggggccgacctcgccgcccccgcctc 452

                                               
Query: 276 ctccttcatcaagtttgtgaatgttactttctggag 311
           |||||||||||||||   ||||||||||||||||||
Sbjct: 453 ctccttcatcaagttcacgaatgttactttctggag 488
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>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0005H02, complete sequence
          Length = 144882

 Score =  178 bits (90), Expect = 7e-42
 Identities = 123/134 (91%)
 Strand = Plus / Plus

                                                                        
Query: 156  ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
            ||||||||||||||||||||||| | | ||| ||||||| |||||||| ||||| |||||
Sbjct: 7031 ggaggcgtcgatccacacctacgacagggagccgttccgggaggtggggaacgcgttcct 7090

                                                                        
Query: 216  cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
            ||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 7091 cctctccgggggcagcgagggcgtcgtcgccgacggggccgacctcgccgcccccgcctc 7150

                          
Query: 276  ctccttcatcaagt 289
            ||||||||||||||
Sbjct: 7151 ctccttcatcaagt 7164
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>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07,
              complete sequence
          Length = 175703

 Score =  178 bits (90), Expect = 7e-42
 Identities = 123/134 (91%)
 Strand = Plus / Plus

                                                                          
Query: 156    ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
              ||||||||||||||||||||||| | | ||| ||||||| |||||||| ||||| |||||
Sbjct: 150930 ggaggcgtcgatccacacctacgacagggagccgttccgggaggtggggaacgcgttcct 150989

                                                                          
Query: 216    cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
              ||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 150990 cctctccgggggcagcgagggcgtcgtcgccgacggggccgacctcgccgcccccgcctc 151049

                            
Query: 276    ctccttcatcaagt 289
              ||||||||||||||
Sbjct: 151050 ctccttcatcaagt 151063
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  178 bits (90), Expect = 7e-42
 Identities = 123/134 (91%)
 Strand = Plus / Plus

                                                                            
Query: 156      ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
                ||||||||||||||||||||||| | | ||| ||||||| |||||||| ||||| |||||
Sbjct: 19432379 ggaggcgtcgatccacacctacgacagggagccgttccgggaggtggggaacgcgttcct 19432438

                                                                            
Query: 216      cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
                ||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 19432439 cctctccgggggcagcgagggcgtcgtcgccgacggggccgacctcgccgcccccgcctc 19432498

                              
Query: 276      ctccttcatcaagt 289
                ||||||||||||||
Sbjct: 19432499 ctccttcatcaagt 19432512
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  178 bits (90), Expect = 7e-42
 Identities = 123/134 (91%)
 Strand = Plus / Plus

                                                                            
Query: 156      ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
                ||||||||||||||||||||||| | | ||| ||||||| |||||||| ||||| |||||
Sbjct: 19591928 ggaggcgtcgatccacacctacgacagggagccgttccgggaggtggggaacgcgttcct 19591987

                                                                            
Query: 216      cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
                ||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 19591988 cctctccgggggcagcgagggcgtcgtcgccgacggggccgacctcgccgcccccgcctc 19592047

                              
Query: 276      ctccttcatcaagt 289
                ||||||||||||||
Sbjct: 19592048 ctccttcatcaagt 19592061
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                            
Query: 156      ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
                |||||||||||||||||| |||| | | ||  | ||||| |||||||| || || |||||
Sbjct: 15998550 ggaggcgtcgatccacacatacgacagggaaccattccgagaggtggggaatgcattcct 15998491

                                                                            
Query: 216      cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
                ||| ||||| || ||||||||| |||||| |||| ||||||| |||||| |||| |||||
Sbjct: 15998490 cctctccggggggagcgagggcgtcgtcgtcgacagggccgacctcgccacccctgcctc 15998431

                          
Query: 276      ctccttcatc 285
                ||||||||||
Sbjct: 15998430 ctccttcatc 15998421
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                            
Query: 156      ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
                |||||||||||||||||| |||| | | ||  | ||||| |||||||| || || |||||
Sbjct: 15951783 ggaggcgtcgatccacacatacgacagggaaccattccgagaggtggggaatgcattcct 15951724

                                                                            
Query: 216      cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
                ||| ||||| || ||||||||| |||||| |||| ||||||| |||||| |||| |||||
Sbjct: 15951723 cctctccggggggagcgagggcgtcgtcgtcgacagggccgacctcgccacccctgcctc 15951664

                          
Query: 276      ctccttcatc 285
                ||||||||||
Sbjct: 15951663 ctccttcatc 15951654
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>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153350

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                         
Query: 156   ggaggcgtcgatccacacctacggccgcgagtcgttccgcgaggtgggtaacgctttcct 215
             |||||||||||||||||| |||| | | ||  | ||||| |||||||| || || |||||
Sbjct: 65963 ggaggcgtcgatccacacatacgacagggaaccattccgagaggtggggaatgcattcct 65904

                                                                         
Query: 216   cctgtccggcggcagcgagggcatcgtcgccgacggggccgatctcgccgcccccgcctc 275
             ||| ||||| || ||||||||| |||||| |||| ||||||| |||||| |||| |||||
Sbjct: 65903 cctctccggggggagcgagggcgtcgtcgtcgacagggccgacctcgccacccctgcctc 65844

                       
Query: 276   ctccttcatc 285
             ||||||||||
Sbjct: 65843 ctccttcatc 65834
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>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone
             BACR48L05, complete sequence
          Length = 177138

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 263   ccgcccccgcctcctccttcatca 286
             ||||||||||||||||||||||||
Sbjct: 79712 ccgcccccgcctcctccttcatca 79735
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>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the
            complete sequence
          Length = 290619

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 263  ccgcccccgcctcctccttcatca 286
            ||||||||||||||||||||||||
Sbjct: 6379 ccgcccccgcctcctccttcatca 6356
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 215     tcctgtccggcggcagcgagggc 237
               |||||||||||||||||||||||
Sbjct: 4054611 tcctgtccggcggcagcgagggc 4054633
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>ref|NM_078841.3| Drosophila melanogaster spellchecker1 CG4215-RA, transcript variant
           A (spel1), mRNA
          Length = 3293

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 27  ccacacccacacgccgctggcc 48
           ||||||||||||||||||||||
Sbjct: 563 ccacacccacacgccgctggcc 542
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>ref|NM_001014482.1| Drosophila melanogaster spellchecker1 CG4215-RC, transcript variant
           C (spel1), mRNA
          Length = 3369

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 27  ccacacccacacgccgctggcc 48
           ||||||||||||||||||||||
Sbjct: 563 ccacacccacacgccgctggcc 542
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>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR37K07, complete sequence
          Length = 157722

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 27     ccacacccacacgccgctggcc 48
              ||||||||||||||||||||||
Sbjct: 120739 ccacacccacacgccgctggcc 120718
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>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
           BACR21J17, complete sequence
          Length = 174974

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 27  ccacacccacacgccgctggcc 48
           ||||||||||||||||||||||
Sbjct: 158 ccacacccacacgccgctggcc 137
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>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
              sequence
          Length = 236144

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 27     ccacacccacacgccgctggcc 48
              ||||||||||||||||||||||
Sbjct: 128082 ccacacccacacgccgctggcc 128061
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>gb|U17893.1|DMU17893 Drosophila melanogaster Spellchecker1 (spel1) gene, partial cds
          Length = 3365

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 27  ccacacccacacgccgctggcc 48
           ||||||||||||||||||||||
Sbjct: 766 ccacacccacacgccgctggcc 745
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>ref|XM_550602.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 260  tcgccgcccccgcctcctcct 280
            |||||||||||||||||||||
Sbjct: 1036 tcgccgcccccgcctcctcct 1016
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   tcgccgcccccgcctcctcct 280
             |||||||||||||||||||||
Sbjct: 60296 tcgccgcccccgcctcctcct 60316
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 260     tcgccgcccccgcctcctcct 280
               |||||||||||||||||||||
Sbjct: 1740081 tcgccgcccccgcctcctcct 1740101
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0679C08
          Length = 156266

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   tcgccgcccccgcctcctcct 280
             |||||||||||||||||||||
Sbjct: 65230 tcgccgcccccgcctcctcct 65250
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>gb|AF502559.1| Synthetic construct major pollen allergen Artv1 mRNA, complete cds
          Length = 330

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 126 tgccgccggcggcgggtggtggggc 150
           ||||||||||||||||||| |||||
Sbjct: 229 tgccgccggcggcgggtggaggggc 205
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     ggcggccctcgtgcttgccg 130
               ||||||||||||||||||||
Sbjct: 3869690 ggcggccctcgtgcttgccg 3869709
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>ref|XM_466427.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 435

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 cgccgcccccgcctcctcct 280
           ||||||||||||||||||||
Sbjct: 189 cgccgcccccgcctcctcct 170



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 cgccgcccccgcctcctcct 280
           ||||||||||||||||||||
Sbjct: 135 cgccgcccccgcctcctcct 116
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>ref|NM_191944.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 91   cttcgcctcagcgcgctcttggcggccc 118
            |||||||||||||||| || ||||||||
Sbjct: 1148 cttcgcctcagcgcgcgctcggcggccc 1121
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>gb|AC103896.3| Papio anubis clone RP41-441D23, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ccgcccccgcctcctccttc 282
             ||||||||||||||||||||
Sbjct: 99873 ccgcccccgcctcctccttc 99892
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cccgccccacacccacacgc 40
             ||||||||||||||||||||
Sbjct: 55390 cccgccccacacccacacgc 55409
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>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06,
              complete sequence
          Length = 148029

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     cccgccccacacccacacgc 40
              ||||||||||||||||||||
Sbjct: 123462 cccgccccacacccacacgc 123481
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 156     ggaggcgtcgatccacacct 175
               ||||||||||||||||||||
Sbjct: 1013796 ggaggcgtcgatccacacct 1013815
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>gb|AC129608.3| Mus musculus BAC clone RP23-193A2 from chromosome 5, complete sequence
          Length = 240180

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   cctccttcatcaagtttgtg 294
             ||||||||||||||||||||
Sbjct: 21139 cctccttcatcaagtttgtg 21120
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>gb|AC036146.10| Mus musculus chromosome 5, clone RP23-294A15, complete sequence
          Length = 196168

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    cctccttcatcaagtttgtg 294
              ||||||||||||||||||||
Sbjct: 110535 cctccttcatcaagtttgtg 110554
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 31473271 cttcgcctcagcgcgcgctcggcggccc 31473244



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 27561306 cttcgcctcagcgcgcgctcggcggccc 27561279
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
              sequence
          Length = 133449

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 91     cttcgcctcagcgcgctcttggcggccc 118
              |||||||||||||||| || ||||||||
Sbjct: 119325 cttcgcctcagcgcgcgctcggcggccc 119352
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>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence,
            complete sequence
          Length = 27470

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 91   cttcgcctcagcgcgctcttggcggccc 118
            |||||||||||||||| || ||||||||
Sbjct: 1468 cttcgcctcagcgcgcgctcggcggccc 1495
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>gb|AC161529.4| Mus musculus chromosome 5, clone RP24-316L21, complete sequence
          Length = 184502

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    cctccttcatcaagtttgtg 294
              ||||||||||||||||||||
Sbjct: 103241 cctccttcatcaagtttgtg 103222
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>emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K9 on chromosome 1q23.2-24.3
             Contains the 5' end of a novel gene, a novel gene, the
             ATP1B1 gene for Na+/K+ transporting ATPase beta 1
             polypeptide, the 3' end of the NME7 gene for protein
             expressed in non-metastatic cells 7
             (nucleoside-diphosphate kinase) and a CpG island, complete
             sequence
          Length = 153624

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   cgccgcccccgcctcctcct 280
             ||||||||||||||||||||
Sbjct: 65853 cgccgcccccgcctcctcct 65872
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>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
             sequence
          Length = 159091

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 91    cttcgcctcagcgcgctcttggcggccc 118
             |||||||||||||||| || ||||||||
Sbjct: 22529 cttcgcctcagcgcgcgctcggcggccc 22556
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    cgccgacggggccgatctcg 262
              ||||||||||||||||||||
Sbjct: 124972 cgccgacggggccgatctcg 124991
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>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0061H20, from chromosome 10,
             complete sequence
          Length = 135876

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   cgccgcccccgcctcctcct 280
             ||||||||||||||||||||
Sbjct: 43673 cgccgcccccgcctcctcct 43692
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>gb|DQ397623.1| Cenarchaeum symbiosum clone C15D07, complete sequence
          Length = 43058

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cgccgcccccgcctcctcct 280
            ||||||||||||||||||||
Sbjct: 6543 cgccgcccccgcctcctcct 6524
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>gb|AE009774.1|AE009774 Pyrobaculum aerophilum strain IM2 section 29 of 201 of the complete
             genome
          Length = 10944

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcgtcgccgacggggccgat 258
             ||||||||||||||||||||
Sbjct: 10290 tcgtcgccgacggggccgat 10309
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 22      ccgccccacacccacacgccgctg 45
               |||||| |||||||||||||||||
Sbjct: 4298410 ccgccctacacccacacgccgctg 4298387
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     cgccgcccccgcctcctcct 280
               ||||||||||||||||||||
Sbjct: 4617629 cgccgcccccgcctcctcct 4617648
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       cccgccccacacccacacgc 40
                ||||||||||||||||||||
Sbjct: 18088135 cccgccccacacccacacgc 18088154
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 31563787 cttcgcctcagcgcgcgctcggcggccc 31563760



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 27652629 cttcgcctcagcgcgcgctcggcggccc 27652602
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      cgccgcccccgcctcctcct 280
                ||||||||||||||||||||
Sbjct: 22608767 cgccgcccccgcctcctcct 22608786



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      cgccgcccccgcctcctcct 280
                ||||||||||||||||||||
Sbjct: 22608713 cgccgcccccgcctcctcct 22608732
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 29894682 cttcgcctcagcgcgcgctcggcggccc 29894655



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 91       cttcgcctcagcgcgctcttggcggccc 118
                |||||||||||||||| || ||||||||
Sbjct: 27416374 cttcgcctcagcgcgcgctcggcggccc 27416401
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>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0683B11
          Length = 155955

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 91     cttcgcctcagcgcgctcttggcggccc 118
              |||||||||||||||| || ||||||||
Sbjct: 138777 cttcgcctcagcgcgcgctcggcggccc 138750
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480C01
          Length = 151100

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 91    cttcgcctcagcgcgctcttggcggccc 118
             |||||||||||||||| || ||||||||
Sbjct: 39240 cttcgcctcagcgcgcgctcggcggccc 39213
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>gb|AE004895.1| Pseudomonas aeruginosa PAO1, section 456 of 529 of the complete
            genome
          Length = 12211

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 242  tcgccgacggggccgatctcgccg 265
            |||||||||||| |||||||||||
Sbjct: 9063 tcgccgacggggtcgatctcgccg 9086
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>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence,
            complete sequence
          Length = 136982

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 91   cttcgcctcagcgcgctcttggcggccc 118
            |||||||||||||||| || ||||||||
Sbjct: 3003 cttcgcctcagcgcgcgctcggcggccc 2976
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>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0014E08
          Length = 144219

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 91    cttcgcctcagcgcgctcttggcggccc 118
             |||||||||||||||| || ||||||||
Sbjct: 99269 cttcgcctcagcgcgcgctcggcggccc 99296
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>dbj|AP004145.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0047F09
          Length = 79652

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 91   cttcgcctcagcgcgctcttggcggccc 118
            |||||||||||||||| || ||||||||
Sbjct: 6263 cttcgcctcagcgcgcgctcggcggccc 6290
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 117     cctcgtgcttgccgccggcggcgg 140
               ||||| ||||||||||||||||||
Sbjct: 6287746 cctcgggcttgccgccggcggcgg 6287723
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>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056I22
          Length = 147728

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   cgccgcccccgcctcctcct 280
             ||||||||||||||||||||
Sbjct: 56578 cgccgcccccgcctcctcct 56597



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   cgccgcccccgcctcctcct 280
             ||||||||||||||||||||
Sbjct: 56524 cgccgcccccgcctcctcct 56543
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>emb|X84724.1|AAVFAV1CE Fowl adenovirus 1 two fibers, protein pVIII and 7 unknown genes
          Length = 7359

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cgccgcccccgcctcctcct 280
            ||||||||||||||||||||
Sbjct: 1239 cgccgcccccgcctcctcct 1220
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>dbj|AK103811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147B10, full
           insert sequence
          Length = 1494

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 cgccgcccccgcctcctcct 280
           ||||||||||||||||||||
Sbjct: 727 cgccgcccccgcctcctcct 746
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>gb|U46933.1|AAU46933 Avian adenovirus CELO, complete genome
          Length = 43804

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   cgccgcccccgcctcctcct 280
             ||||||||||||||||||||
Sbjct: 28297 cgccgcccccgcctcctcct 28278
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     atcgtcgccgacggggccga 257
               ||||||||||||||||||||
Sbjct: 1801901 atcgtcgccgacggggccga 1801920
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     cgccgcccccgcctcctcct 280
               ||||||||||||||||||||
Sbjct: 4618450 cgccgcccccgcctcctcct 4618469
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>gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) gene, exons 1 and 2
          Length = 7675

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 cgccgcccccgcctcctcct 280
           ||||||||||||||||||||
Sbjct: 926 cgccgcccccgcctcctcct 945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,465,065
Number of Sequences: 3902068
Number of extensions: 2465065
Number of successful extensions: 60738
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59289
Number of HSP's gapped (non-prelim): 1446
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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