>RT4I1_HUMAN (Q8WWV3) Reticulon-4-interacting protein 1, mitochondrial precursor|
           (NOGO-interacting mitochondrial protein)
          Length = 396

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 193 RRSAMTAVVLWGQKATGAPDLRRLAGVAPLQATAEAMV 80
           RR+A TAV  W  K    P +RR++  +P      A V
Sbjct: 10  RRNACTAVCFWRSKVVQKPSVRRISTTSPRSTVMPAWV 47

>H11_CAEEL (P10771) Histone H1.1|
          Length = 207

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 93  AVACKGATPASLLKSGAPVAFCPHNTTAVIADRRPYNTLVKEAIRYDDDHSGRD-LVIPS 269
           A A K A P  + K+ APVA              PY  ++KEAI+   D  G     I  
Sbjct: 17  AKAAKAAKPTKVAKAKAPVA------------HPPYINMIKEAIKQLKDRKGASKQAILK 64

Query: 270 FISQD 284
           FISQ+
Sbjct: 65  FISQN 69

>VGAM_BPMU (P06023) Host-nuclease inhibitor protein gam|
          Length = 174

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 111 ATPASLLKSGAPVAFCPHNTTAVIADRRPYNTLVKEAIRYDDD 239
           A PA  +KS A  A+ P N  AVI D +    L +EA R + +
Sbjct: 2   AKPAKRIKSAA-AAYVPQNRDAVITDIKRIGDLQREASRLETE 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,500,307
Number of Sequences: 219361
Number of extensions: 236081
Number of successful extensions: 745
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)