>gb|AF104108.1| Triticum aestivum small heat shock protein Hsp23.6 mRNA, nuclear
           gene encoding mitochondrial protein, complete cds
          Length = 988

 Score =  163 bits (82), Expect = 4e-37
 Identities = 156/182 (85%), Gaps = 9/182 (4%)
 Strand = Plus / Plus

                                                                       
Query: 115 cgccggccagcctcctcaagtccggcgctcccgtggccttctgcccccacaacaccaccg 174
           ||||||||||||||||||||||||| ||||||||||||||| || |   | || || |||
Sbjct: 105 cgccggccagcctcctcaagtccggtgctcccgtggccttccgctcggtccactcccccg 164

                                                                       
Query: 175 ccgtcatcgccgaccgccgcccgtacaacaccctggtcaaggaggccatccgctacgacg 234
           |||||| ||||| |||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 165 ccgtcaccgccgcccgccgcccgtacaacacccaggccaaggaggtcagccgctacgacg 224

                                                                       
Query: 235 acg---------accacagcggccgcgacctcgtcatccccagcttcatctcgcaggacg 285
           |||         || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 225 acgacgacgacgactacagcggccgcgacctcgtcatccccagcttcttctcgcaggacg 284

             
Query: 286 tg 287
           ||
Sbjct: 285 tg 286

>gb|AC025721.3| Caenorhabditis elegans cosmid Y48G8AL, complete sequence
          Length = 126020

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   acaacaccaccgccgtcatcg 183
             |||||||||||||||||||||
Sbjct: 85027 acaacaccaccgccgtcatcg 85007

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 170     caccgccgtcatcgccgaccgccgc 194
               |||||||||||||| ||||||||||
Sbjct: 2610352 caccgccgtcatcggcgaccgccgc 2610376

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 120      gccagcctcctcaagtccggc 140
                |||||||||||||||||||||
Sbjct: 14247374 gccagcctcctcaagtccggc 14247394

>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   gccagcctcctcaagtccggc 140
             |||||||||||||||||||||
Sbjct: 43064 gccagcctcctcaagtccggc 43084

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    tcctcaagtccggcgctcccgtgg 150
              |||||||||| |||||||||||||
Sbjct: 624843 tcctcaagtcaggcgctcccgtgg 624820

>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
             sequence
          Length = 191270

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     accacaagaatccaaaatca 20
             ||||||||||||||||||||
Sbjct: 72042 accacaagaatccaaaatca 72023

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     cgccgtcatcgccgaccgcc 192
               ||||||||||||||||||||
Sbjct: 4209271 cgccgtcatcgccgaccgcc 4209252


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,681,551
Number of Sequences: 3902068
Number of extensions: 1681551
Number of successful extensions: 39640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39353
Number of HSP's gapped (non-prelim): 287
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)